RLG00000000589

ACT domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
2348003 .. 2348869
867 bp
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UTR
Exon/CDS
Intron
RLM00000000589

Sequence Viewer

Length: 309 bp
ATGAACTTTTCACATGATATGGATCATGAATATGAGAAAATTTGCAGGAGAATGAACCCACCAAGGGTTGTGGTTGATAATGAATTCGGCAAGAATGCTATGGTGATAAGGGTGAAGTGTAAAACAATTGCGATCTGTCTGCATGAAAATCACCAAGGCCTGGATGGATTGAAACAACAATCTAATTTAAAATATGGTGTAGAAGTTGTGAAGTCAGATGAACAGGTTCATCTTGTTAAAAGGATGAGCAAATGCAAGCTGTCCAAACTGAATTCAACAGCACTGAAACTCGTATTCACAATCCTTTAG

Protein Analysis

103

Amino Acids

11.77

Weight (kDa)

9.3

Isoelectric Point (pI)

25.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 160
AclWI GGATC 1 cut(s) 30
AcsI RAATTY 3 cut(s) 39, 83, 271
AfiI CCNNNNNNNGG 2 cut(s) 64, 160
AgsI TTSAA 2 cut(s) 172, 276
AjnI CCWGG 1 cut(s) 159
AluBI AGCT 1 cut(s) 259
AluI AGCT 1 cut(s) 259
AlwI GGATC 1 cut(s) 30
AoxI GGCC 1 cut(s) 157
ApoI RAATTY 3 cut(s) 39, 83, 271
Asp700I GAANNNNTTC 1 cut(s) 225
AsuHPI GGTGA 3 cut(s) 115, 124, 143
BccI CCATC 1 cut(s) 158
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 1 cut(s) 161
Bme1390I CCNGG 1 cut(s) 161
BmrFI CCNGG 1 cut(s) 161
BsaBI GATNNNNATC 1 cut(s) 21
BsaJI CCNNGG 2 cut(s) 62, 154
Bsc4I CCNNNNNNNGG 2 cut(s) 64, 160
Bse8I GATNNNNATC 1 cut(s) 21
BseBI CCWGG 1 cut(s) 161
BseDI CCNNGG 2 cut(s) 62, 154
BseGI GGATG 2 cut(s) 169, 249
BseJI GATNNNNATC 1 cut(s) 21
BseLI CCNNNNNNNGG 2 cut(s) 64, 160
BshFI GGCC 1 cut(s) 159
BslI CCNNNNNNNGG 2 cut(s) 64, 160
BsmI GAATGC 1 cut(s) 100
BsnI GGCC 1 cut(s) 159
Bsp143I GATC 2 cut(s) 22, 132
BspANI GGCC 1 cut(s) 159
BspHI TCATGA 1 cut(s) 25
BspPI GGATC 1 cut(s) 30
BssECI CCNNGG 2 cut(s) 62, 154
BssMI GATC 2 cut(s) 22, 132
BssT1I CCWWGG 2 cut(s) 62, 154
Bst2UI CCWGG 1 cut(s) 161
BstC8I GCNNGC 1 cut(s) 257
BstF5I GGATG 2 cut(s) 169, 249
BstKTI GATC 2 cut(s) 25, 135
BstMBI GATC 2 cut(s) 22, 132
BstNI CCWGG 1 cut(s) 161
BstSCI CCNGG 1 cut(s) 159
BsuRI GGCC 1 cut(s) 159
BtsCI GGATG 2 cut(s) 169, 249
BtsIMutI CAGTG 1 cut(s) 281
Cac8I GCNNGC 1 cut(s) 257
CciI TCATGA 1 cut(s) 25
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviAII CATG 3 cut(s) 14, 26, 143
CviJI RGCY 2 cut(s) 159, 259
CviKI_1 RGCY 2 cut(s) 159, 259
DpnI GATC 2 cut(s) 24, 134
DpnII GATC 2 cut(s) 22, 132
DraI TTTAAA 1 cut(s) 189
Eco130I CCWWGG 2 cut(s) 62, 154
Eco147I AGGCCT 1 cut(s) 159
EcoRI GAATTC 2 cut(s) 83, 271
EcoRII CCWGG 1 cut(s) 159
EcoT14I CCWWGG 2 cut(s) 62, 154
ErhI CCWWGG 2 cut(s) 62, 154
FaeI CATG 3 cut(s) 17, 29, 146
FaiI YATR 7 cut(s) 15, 20, 27, 33, 101, 144, 195
FatI CATG 3 cut(s) 13, 25, 142
FokI GGATG 2 cut(s) 176, 256
HaeIII GGCC 1 cut(s) 159
Hin1II CATG 3 cut(s) 17, 29, 146
HphI GGTGA 3 cut(s) 115, 124, 143
Hpy188I TCNGA 1 cut(s) 217
Hpy188III TCNNGA 1 cut(s) 26
HpyCH4V TGCA 3 cut(s) 45, 142, 255
Hsp92II CATG 3 cut(s) 17, 29, 146
Kzo9I GATC 2 cut(s) 22, 132
LpnPI CCDG 4 cut(s) 31, 146, 173, 209
MalI GATC 2 cut(s) 24, 134
MboI GATC 2 cut(s) 22, 132
MfeI CAATTG 1 cut(s) 126
MluCI AATT 5 cut(s) 39, 83, 126, 184, 271
MroXI GAANNNNTTC 1 cut(s) 225
MseI TTAA 2 cut(s) 188, 237
MslI CAYNNNNRTG 1 cut(s) 30
MspR9I CCNGG 1 cut(s) 161
MunI CAATTG 1 cut(s) 126
Mva1269I GAATGC 1 cut(s) 100
MvaI CCWGG 1 cut(s) 161
NdeII GATC 2 cut(s) 22, 132
NlaIII CATG 3 cut(s) 17, 29, 146
PagI TCATGA 1 cut(s) 25
PceI AGGCCT 1 cut(s) 159
PctI GAATGC 1 cut(s) 100
PdmI GAANNNNTTC 1 cut(s) 225
PflMI CCANNNNNTGG 1 cut(s) 160
Psp6I CCWGG 1 cut(s) 159
PspGI CCWGG 1 cut(s) 159
RseI CAYNNNNRTG 1 cut(s) 30
SaqAI TTAA 2 cut(s) 188, 237
Sau3AI GATC 2 cut(s) 22, 132
ScrFI CCNGG 1 cut(s) 161
SetI ASST 2 cut(s) 228, 261
SmiMI CAYNNNNRTG 1 cut(s) 30
Sse9I AATT 5 cut(s) 39, 83, 126, 184, 271
SseBI AGGCCT 1 cut(s) 159
StuI AGGCCT 1 cut(s) 159
StyD4I CCNGG 1 cut(s) 159
StyI CCWWGG 2 cut(s) 62, 154
TasI AATT 5 cut(s) 39, 83, 126, 184, 271
Tru1I TTAA 2 cut(s) 188, 237
Tru9I TTAA 2 cut(s) 188, 237
TscAI CASTG 1 cut(s) 288
TspDTI ATGAA 7 cut(s) 17, 42, 68, 96, 159, 218, 234
TspRI CASTG 1 cut(s) 288
Van91I CCANNNNNTGG 1 cut(s) 160
XapI RAATTY 3 cut(s) 39, 83, 271
XcmI CCANNNNNNNNNTGG 1 cut(s) 161
XmnI GAANNNNTTC 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.