Rh2AG376600

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
56417576 .. 56419481
1906 bp
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UTR
Exon/CDS
Intron
Rh2AG376600.1

Sequence Viewer

Length: 321 bp
ATGCTGAAGAAGGGGAAAGGCTTCGAAATCGATTGGGTCGAGCTGCCTATAGTTCTAATGTTGGCCACAGATATGGATTTAGTTGAGGTTAGCATGAACTTTTCACATATGGATCATGAATATGTGAAAATTCGCAGCCTTCACCTTCCTGTTCTTTTCATCATTGAAATCGTTGTTCACATATTCTTGCTTTTTCTTGCAATAGGACAAGCAATATTTCATCTTGACGAACCAGATTCTCATGTGATCCTCAGCACTCTCATTTTCAATACATCTGTATTCTGCCAGAGGCTGTATTATATTTTTGGGATTGTACATTAA

Protein Analysis

106

Amino Acids

12.33

Weight (kDa)

5.49

Isoelectric Point (pI)

26.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 120, 241
AcoI YGGCCR 1 cut(s) 63
AcsI RAATTY 1 cut(s) 129
AcuI CTGAAG 1 cut(s) 26
AfaI GTAC 1 cut(s) 315
AgsI TTSAA 2 cut(s) 167, 268
AluBI AGCT 1 cut(s) 43
AluI AGCT 1 cut(s) 43
AlwI GGATC 2 cut(s) 120, 241
AlwNI CAGNNNCTG 1 cut(s) 292
AoxI GGCC 1 cut(s) 63
ApeKI GCWGC 2 cut(s) 43, 135
ApoI RAATTY 1 cut(s) 129
Asp700I GAANNNNTTC 1 cut(s) 20
AsuHPI GGTGA 1 cut(s) 134
AsuII TTCGAA 1 cut(s) 24
BalI TGGCCA 1 cut(s) 65
BbvCI CCTCAGC 1 cut(s) 251
BbvI GCAGC 2 cut(s) 30, 147
BfmI CTRYAG 1 cut(s) 48
BisI GCNGC 2 cut(s) 44, 136
BlsI GCNGC 2 cut(s) 45, 137
Bpu10I CCTNAGC 1 cut(s) 251
Bpu14I TTCGAA 1 cut(s) 24
Bsa29I ATCGAT 1 cut(s) 30
BseCI ATCGAT 1 cut(s) 30
BseMII CTCAG 1 cut(s) 265
BseXI GCAGC 2 cut(s) 30, 147
BshFI GGCC 1 cut(s) 65
BshVI ATCGAT 1 cut(s) 30
BsnI GGCC 1 cut(s) 65
Bsp119I TTCGAA 1 cut(s) 24
Bsp1407I TGTACA 1 cut(s) 313
Bsp143I GATC 2 cut(s) 112, 246
BspANI GGCC 1 cut(s) 65
BspCNI CTCAG 1 cut(s) 264
BspDI ATCGAT 1 cut(s) 30
BspHI TCATGA 1 cut(s) 115
BspPI GGATC 2 cut(s) 120, 241
BspT104I TTCGAA 1 cut(s) 24
BsrGI TGTACA 1 cut(s) 313
BssMI GATC 2 cut(s) 112, 246
BstAUI TGTACA 1 cut(s) 313
BstBI TTCGAA 1 cut(s) 24
BstDEI CTNAG 1 cut(s) 251
BstKTI GATC 2 cut(s) 115, 249
BstMBI GATC 2 cut(s) 112, 246
BstSFI CTRYAG 1 cut(s) 48
BstV1I GCAGC 2 cut(s) 30, 147
BstXI CCANNNNNNTGG 1 cut(s) 73
Bsu15I ATCGAT 1 cut(s) 30
BsuRI GGCC 1 cut(s) 65
BsuTUI ATCGAT 1 cut(s) 30
CaiI CAGNNNCTG 1 cut(s) 292
CciI TCATGA 1 cut(s) 115
ClaI ATCGAT 1 cut(s) 30
Csp6I GTAC 1 cut(s) 314
CviAII CATG 3 cut(s) 94, 116, 242
CviJI RGCY 5 cut(s) 21, 43, 65, 138, 292
CviKI_1 RGCY 5 cut(s) 21, 43, 65, 138, 292
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 1 cut(s) 251
DpnI GATC 2 cut(s) 114, 248
DpnII GATC 2 cut(s) 112, 246
EaeI YGGCCR 1 cut(s) 63
Eco57I CTGAAG 1 cut(s) 26
FaeI CATG 3 cut(s) 97, 119, 245
FatI CATG 3 cut(s) 93, 115, 241
FauNDI CATATG 1 cut(s) 108
Fnu4HI GCNGC 2 cut(s) 44, 136
Fsp4HI GCNGC 2 cut(s) 44, 136
GluI GCNGC 2 cut(s) 44, 136
HaeIII GGCC 1 cut(s) 65
Hin1II CATG 3 cut(s) 97, 119, 245
HinfI GANTC 1 cut(s) 236
HphI GGTGA 1 cut(s) 134
Hpy166II GTNNAC 1 cut(s) 178
Hpy188III TCNNGA 2 cut(s) 116, 224
Hpy8I GTNNAC 1 cut(s) 178
HpyAV CCTTC 3 cut(s) 4, 149, 155
HpyCH4V TGCA 1 cut(s) 200
HpyF3I CTNAG 1 cut(s) 251
Hsp92II CATG 3 cut(s) 97, 119, 245
Kzo9I GATC 2 cut(s) 112, 246
LpnPI CCDG 3 cut(s) 162, 246, 299
Lsp1109I GCAGC 2 cut(s) 30, 147
MalI GATC 2 cut(s) 114, 248
MboI GATC 2 cut(s) 112, 246
MboII GAAGA 1 cut(s) 19
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 1 cut(s) 129
MluNI TGGCCA 1 cut(s) 65
MnlI CCTC 3 cut(s) 79, 260, 282
Mox20I TGGCCA 1 cut(s) 65
MroXI GAANNNNTTC 1 cut(s) 20
MscI TGGCCA 1 cut(s) 65
MseI TTAA 1 cut(s) 319
MslI CAYNNNNRTG 2 cut(s) 71, 120
Msp20I TGGCCA 1 cut(s) 65
NdeI CATATG 1 cut(s) 108
NdeII GATC 2 cut(s) 112, 246
NlaIII CATG 3 cut(s) 97, 119, 245
NspV TTCGAA 1 cut(s) 24
PagI TCATGA 1 cut(s) 115
PcsI WCGNNNNNNNCGW 1 cut(s) 36
PdmI GAANNNNTTC 1 cut(s) 20
PfeI GAWTC 1 cut(s) 236
PkrI GCNGC 2 cut(s) 45, 137
PstNI CAGNNNCTG 1 cut(s) 292
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
RseI CAYNNNNRTG 2 cut(s) 71, 120
SaqAI TTAA 1 cut(s) 319
SatI GCNGC 2 cut(s) 44, 136
Sau3AI GATC 2 cut(s) 112, 246
SetI ASST 3 cut(s) 45, 90, 147
SfcI CTRYAG 1 cut(s) 48
SfuI TTCGAA 1 cut(s) 24
SmiMI CAYNNNNRTG 2 cut(s) 71, 120
Sse9I AATT 1 cut(s) 129
SspI AATATT 1 cut(s) 216
TaqI TCGA 3 cut(s) 24, 30, 39
TasI AATT 1 cut(s) 129
TatI WGTACW 1 cut(s) 313
TfiI GAWTC 1 cut(s) 236
Tru1I TTAA 1 cut(s) 319
Tru9I TTAA 1 cut(s) 319
TseI GCWGC 2 cut(s) 43, 135
TspDTI ATGAA 4 cut(s) 110, 132, 148, 209
XapI RAATTY 1 cut(s) 129
XmnI GAANNNNTTC 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.