Rh7CG428200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
55822395 .. 55825222
2828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG428200.1

Sequence Viewer

Length: 219 bp
ATGAACCCTAGCGATCTCGTCTCGTCGACCTCCACTACAGACAGAGAGAAATTTGGTGTGAGTTTTATCAAATTCGTGAAAAGCACGGGCAGGTCCATCACCGAGCTTCTTTGCAGGCTGAAGAAGGGGAAAGGCTTCAAAATCGATTGGGTCGAGCTGCCTATAGTTCTAATGTTCGCCACAGATCTGGATTTAGTTGGTAATTTTCAATTTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

72

Amino Acids

8.12

Weight (kDa)

8.93

Isoelectric Point (pI)

6.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 81
AccI GTMKAC 1 cut(s) 26
AcsI RAATTY 2 cut(s) 50, 71
AcuI CTGAAG 1 cut(s) 140
AgsI TTSAA 2 cut(s) 139, 209
AluBI AGCT 2 cut(s) 106, 157
AluI AGCT 2 cut(s) 106, 157
Alw26I GTCTC 1 cut(s) 25
ApeKI GCWGC 1 cut(s) 157
ApoI RAATTY 2 cut(s) 50, 71
Asp700I GAANNNNTTC 1 cut(s) 134
AspS9I GGNCC 1 cut(s) 93
AsuHPI GGTGA 1 cut(s) 91
AvaII GGWCC 1 cut(s) 93
BbvI GCAGC 1 cut(s) 144
BccI CCATC 1 cut(s) 104
BcoDI GTCTC 1 cut(s) 25
BfaI CTAG 1 cut(s) 9
BfmI CTRYAG 2 cut(s) 36, 162
BfuAI ACCTGC 1 cut(s) 81
BglII AGATCT 1 cut(s) 184
BisI GCNGC 1 cut(s) 158
BlsI GCNGC 1 cut(s) 159
Bme18I GGWCC 1 cut(s) 93
BmgT120I GGNCC 1 cut(s) 93
Bsa29I ATCGAT 1 cut(s) 144
BseCI ATCGAT 1 cut(s) 144
BseXI GCAGC 1 cut(s) 144
BshVI ATCGAT 1 cut(s) 144
BsmAI GTCTC 1 cut(s) 25
BsmBI CGTCTC 1 cut(s) 25
Bsp143I GATC 2 cut(s) 13, 184
BspDI ATCGAT 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 81
BssMI GATC 2 cut(s) 13, 184
BstC8I GCNNGC 1 cut(s) 116
BstKTI GATC 2 cut(s) 16, 187
BstMAI GTCTC 1 cut(s) 25
BstMBI GATC 2 cut(s) 13, 184
BstSFI CTRYAG 2 cut(s) 36, 162
BstV1I GCAGC 1 cut(s) 144
BstX2I RGATCY 1 cut(s) 184
BstXI CCANNNNNNTGG 1 cut(s) 187
BstYI RGATCY 1 cut(s) 184
Bsu15I ATCGAT 1 cut(s) 144
BsuTUI ATCGAT 1 cut(s) 144
BveI ACCTGC 1 cut(s) 81
Cac8I GCNNGC 1 cut(s) 116
Cfr13I GGNCC 1 cut(s) 93
ClaI ATCGAT 1 cut(s) 144
CviJI RGCY 4 cut(s) 106, 118, 135, 157
CviKI_1 RGCY 4 cut(s) 106, 118, 135, 157
DpnI GATC 2 cut(s) 15, 186
DpnII GATC 2 cut(s) 13, 184
Eco47I GGWCC 1 cut(s) 93
Eco57I CTGAAG 1 cut(s) 140
Esp3I CGTCTC 1 cut(s) 25
FaiI YATR 1 cut(s) 164
FblI GTMKAC 1 cut(s) 26
Fnu4HI GCNGC 1 cut(s) 158
Fsp4HI GCNGC 1 cut(s) 158
FspBI CTAG 1 cut(s) 9
GluI GCNGC 1 cut(s) 158
HincII GTYRAC 1 cut(s) 27
HindII GTYRAC 1 cut(s) 27
HphI GGTGA 1 cut(s) 91
Hpy166II GTNNAC 1 cut(s) 27
Hpy188III TCNNGA 2 cut(s) 76, 188
Hpy8I GTNNAC 1 cut(s) 27
Hpy99I CGWCG 1 cut(s) 28
HpyAV CCTTC 1 cut(s) 118
HpyCH4V TGCA 1 cut(s) 114
Kzo9I GATC 2 cut(s) 13, 184
LpnPI CCDG 3 cut(s) 76, 100, 173
Lsp1109I GCAGC 1 cut(s) 144
MaeI CTAG 1 cut(s) 9
MalI GATC 2 cut(s) 15, 186
MboI GATC 2 cut(s) 13, 184
MboII GAAGA 1 cut(s) 133
MflI RGATCY 1 cut(s) 184
MluCI AATT 4 cut(s) 50, 71, 202, 209
MnlI CCTC 1 cut(s) 40
MroXI GAANNNNTTC 1 cut(s) 134
NdeII GATC 2 cut(s) 13, 184
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PdmI GAANNNNTTC 1 cut(s) 134
PkrI GCNGC 1 cut(s) 159
PspPI GGNCC 1 cut(s) 93
PsuI RGATCY 1 cut(s) 184
SalI GTCGAC 1 cut(s) 25
SatI GCNGC 1 cut(s) 158
Sau3AI GATC 2 cut(s) 13, 184
Sau96I GGNCC 1 cut(s) 93
SetI ASST 4 cut(s) 32, 95, 108, 159
SfcI CTRYAG 2 cut(s) 36, 162
SinI GGWCC 1 cut(s) 93
Sse9I AATT 4 cut(s) 50, 71, 202, 209
SspMI CTAG 1 cut(s) 9
TaqI TCGA 3 cut(s) 26, 144, 153
TasI AATT 4 cut(s) 50, 71, 202, 209
TseI GCWGC 1 cut(s) 157
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 93
XapI RAATTY 2 cut(s) 50, 71
XmiI GTMKAC 1 cut(s) 26
XmnI GAANNNNTTC 1 cut(s) 134
XspI CTAG 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.