Rh7CG102400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
7680392 .. 7681002
611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG102400.1

Sequence Viewer

Length: 162 bp
ATGAACCCACCAAGGGTTGTGATTGATAATGAAGCCTGCAAGAATGCTATGGTCACCCTCTCTCATCCTTTTGTGTGGCTTTTTCGCTTTGTTGACCTAGATGGATTGAAACAACAATCTAATTTAAAATATGGTGTAGAAGTTGTGAAGTCAGATGAACAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

6.21

Weight (kDa)

5.59

Isoelectric Point (pI)

34.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 13
AgsI TTSAA 1 cut(s) 109
AsuHPI GGTGA 1 cut(s) 46
BccI CCATC 1 cut(s) 95
BfaI CTAG 1 cut(s) 98
BsaJI CCNNGG 1 cut(s) 11
Bsc4I CCNNNNNNNGG 1 cut(s) 13
BseDI CCNNGG 1 cut(s) 11
BseGI GGATG 1 cut(s) 64
BseLI CCNNNNNNNGG 1 cut(s) 13
BslI CCNNNNNNNGG 1 cut(s) 13
BsmI GAATGC 1 cut(s) 49
BssECI CCNNGG 1 cut(s) 11
BssT1I CCWWGG 1 cut(s) 11
BstC8I GCNNGC 1 cut(s) 37
BstEII GGTNACC 1 cut(s) 52
BstF5I GGATG 1 cut(s) 64
BstPI GGTNACC 1 cut(s) 52
BtsCI GGATG 1 cut(s) 64
Cac8I GCNNGC 1 cut(s) 37
CviJI RGCY 2 cut(s) 35, 79
CviKI_1 RGCY 2 cut(s) 35, 79
DraI TTTAAA 1 cut(s) 126
Eco130I CCWWGG 1 cut(s) 11
Eco91I GGTNACC 1 cut(s) 52
EcoO65I GGTNACC 1 cut(s) 52
EcoT14I CCWWGG 1 cut(s) 11
ErhI CCWWGG 1 cut(s) 11
FaiI YATR 2 cut(s) 50, 132
FokI GGATG 1 cut(s) 51
FspBI CTAG 1 cut(s) 98
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HphI GGTGA 1 cut(s) 46
Hpy166II GTNNAC 1 cut(s) 94
Hpy188I TCNGA 1 cut(s) 154
Hpy8I GTNNAC 1 cut(s) 94
HpyCH4V TGCA 1 cut(s) 39
LpnPI CCDG 1 cut(s) 49
MaeI CTAG 1 cut(s) 98
MaeIII GTNAC 1 cut(s) 52
MluCI AATT 1 cut(s) 121
MnlI CCTC 1 cut(s) 68
MseI TTAA 1 cut(s) 125
Mva1269I GAATGC 1 cut(s) 49
NmuCI GTSAC 1 cut(s) 52
PctI GAATGC 1 cut(s) 49
PspEI GGTNACC 1 cut(s) 52
SaqAI TTAA 1 cut(s) 125
SetI ASST 1 cut(s) 99
SgeI CNNG 4 cut(s) 24, 48, 52, 110
Sse9I AATT 1 cut(s) 121
SspMI CTAG 1 cut(s) 98
StyI CCWWGG 1 cut(s) 11
TasI AATT 1 cut(s) 121
Tru1I TTAA 1 cut(s) 125
Tru9I TTAA 1 cut(s) 125
TseFI GTSAC 1 cut(s) 52
Tsp45I GTSAC 1 cut(s) 52
TspDTI ATGAA 2 cut(s) 17, 45
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.