Rh5CG058800

ACT domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
4342105 .. 4343829
1725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG058800.1

Sequence Viewer

Length: 387 bp
ATGTTGGCCACGGATCTGGATTTAGTTGAGGTTAGCATGAACTTTTCGCATGATATGGATAATGTTTATGAGAAAATTTGCAGGAGAATGAATCCACCGAGGGTTGTAGTTGATAATGAAGCCTGCAAGTGCTACGGTGATAAGGTTGGTCTATTGGCCGCTGACACAGTTGATCAGGTGAAGTGTAAAACAATTGCTATCTGCCTGCATGAAGATCACCAAAGCCTGGTTGGATTGAAACAACAATCTAATTTAAAATATGGTGTAAAAGTTGTGAAGGCAGACGAACAGAAGCCGATAGCAGCACTTACTCAACTGGCACAGAAGCAATCTCAACATATCCAAGAGCTGCAATCAGTTCCAATGGAAGGTACAGAGATTGCGTAA

Protein Analysis

128

Amino Acids

14.25

Weight (kDa)

5.5

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 226
AciI CCGC 1 cut(s) 159
AclWI GGATC 1 cut(s) 21
AcoI YGGCCR 2 cut(s) 6, 156
AcsI RAATTY 1 cut(s) 75
AfaI GTAC 1 cut(s) 373
AfiI CCNNNNNNNGG 2 cut(s) 226, 368
AgsI TTSAA 1 cut(s) 238
AjnI CCWGG 1 cut(s) 225
AluBI AGCT 1 cut(s) 349
AluI AGCT 1 cut(s) 349
AlwI GGATC 1 cut(s) 21
AoxI GGCC 2 cut(s) 6, 156
ApeKI GCWGC 2 cut(s) 302, 349
ApoI RAATTY 1 cut(s) 75
AsuHPI GGTGA 3 cut(s) 149, 190, 209
BalI TGGCCA 1 cut(s) 8
BbvI GCAGC 2 cut(s) 314, 336
BciT130I CCWGG 1 cut(s) 227
BclI TGATCA 1 cut(s) 172
BisI GCNGC 3 cut(s) 159, 303, 350
BlsI GCNGC 3 cut(s) 160, 304, 351
Bme1390I CCNGG 1 cut(s) 227
BmrFI CCNGG 1 cut(s) 227
BsaJI CCNNGG 2 cut(s) 9, 98
Bsc4I CCNNNNNNNGG 2 cut(s) 226, 368
Bse1I ACTGG 1 cut(s) 321
BseBI CCWGG 1 cut(s) 227
BseDI CCNNGG 2 cut(s) 9, 98
BseLI CCNNNNNNNGG 2 cut(s) 226, 368
BseNI ACTGG 1 cut(s) 321
BseXI GCAGC 2 cut(s) 314, 336
BshFI GGCC 2 cut(s) 8, 158
BslI CCNNNNNNNGG 2 cut(s) 226, 368
BsnI GGCC 2 cut(s) 8, 158
Bsp143I GATC 3 cut(s) 13, 172, 214
BspACI CCGC 1 cut(s) 159
BspANI GGCC 2 cut(s) 8, 158
BspPI GGATC 1 cut(s) 21
BsrI ACTGG 1 cut(s) 321
BssECI CCNNGG 2 cut(s) 9, 98
BssMI GATC 3 cut(s) 13, 172, 214
Bst2UI CCWGG 1 cut(s) 227
Bst4CI ACNGT 2 cut(s) 137, 169
BstC8I GCNNGC 2 cut(s) 124, 206
BstDSI CCRYGG 1 cut(s) 9
BstKTI GATC 3 cut(s) 16, 175, 217
BstMBI GATC 3 cut(s) 13, 172, 214
BstNI CCWGG 1 cut(s) 227
BstSCI CCNGG 1 cut(s) 225
BstV1I GCAGC 2 cut(s) 314, 336
BstX2I RGATCY 1 cut(s) 13
BstXI CCANNNNNNTGG 1 cut(s) 16
BstYI RGATCY 1 cut(s) 13
BsuRI GGCC 2 cut(s) 8, 158
BtgI CCRYGG 1 cut(s) 9
Cac8I GCNNGC 2 cut(s) 124, 206
Csp6I GTAC 1 cut(s) 372
CviAII CATG 3 cut(s) 37, 50, 209
CviJI RGCY 6 cut(s) 8, 122, 158, 225, 295, 349
CviKI_1 RGCY 6 cut(s) 8, 122, 158, 225, 295, 349
CviQI GTAC 1 cut(s) 372
DpnI GATC 3 cut(s) 15, 174, 216
DpnII GATC 3 cut(s) 13, 172, 214
DraI TTTAAA 1 cut(s) 255
EaeI YGGCCR 2 cut(s) 6, 156
EcoRII CCWGG 1 cut(s) 225
FaeI CATG 3 cut(s) 40, 53, 212
FaiI YATR 7 cut(s) 38, 51, 56, 69, 210, 261, 339
FatI CATG 3 cut(s) 36, 49, 208
FbaI TGATCA 1 cut(s) 172
Fnu4HI GCNGC 3 cut(s) 159, 303, 350
Fsp4HI GCNGC 3 cut(s) 159, 303, 350
GluI GCNGC 3 cut(s) 159, 303, 350
HaeIII GGCC 2 cut(s) 8, 158
Hin1II CATG 3 cut(s) 40, 53, 212
HinfI GANTC 1 cut(s) 91
HphI GGTGA 3 cut(s) 149, 190, 209
Hpy188III TCNNGA 1 cut(s) 17
HpyAV CCTTC 2 cut(s) 271, 362
HpyCH4III ACNGT 2 cut(s) 137, 169
HpyCH4V TGCA 4 cut(s) 81, 126, 208, 352
Hsp92II CATG 3 cut(s) 40, 53, 212
Ksp22I TGATCA 1 cut(s) 172
Kzo9I GATC 3 cut(s) 13, 172, 214
LpnPI CCDG 8 cut(s) 2, 67, 136, 161, 212, 218, 239, 302
Lsp1109I GCAGC 2 cut(s) 314, 336
MalI GATC 3 cut(s) 15, 174, 216
MboI GATC 3 cut(s) 13, 172, 214
MboII GAAGA 1 cut(s) 224
MfeI CAATTG 1 cut(s) 192
MflI RGATCY 1 cut(s) 13
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 3 cut(s) 75, 192, 250
MluNI TGGCCA 1 cut(s) 8
MmeI TCCRAC 1 cut(s) 211
MnlI CCTC 2 cut(s) 22, 93
Mox20I TGGCCA 1 cut(s) 8
MscI TGGCCA 1 cut(s) 8
MseI TTAA 1 cut(s) 254
Msp20I TGGCCA 1 cut(s) 8
MspA1I CMGCKG 1 cut(s) 161
MspR9I CCNGG 1 cut(s) 227
MunI CAATTG 1 cut(s) 192
MvaI CCWGG 1 cut(s) 227
NdeII GATC 3 cut(s) 13, 172, 214
NlaIII CATG 3 cut(s) 40, 53, 212
PfeI GAWTC 1 cut(s) 91
PflMI CCANNNNNTGG 1 cut(s) 226
PkrI GCNGC 3 cut(s) 160, 304, 351
Psp6I CCWGG 1 cut(s) 225
PspGI CCWGG 1 cut(s) 225
PsuI RGATCY 1 cut(s) 13
RsaI GTAC 1 cut(s) 373
RsaNI GTAC 1 cut(s) 372
SaqAI TTAA 1 cut(s) 254
SatI GCNGC 3 cut(s) 159, 303, 350
Sau3AI GATC 3 cut(s) 13, 172, 214
ScrFI CCNGG 1 cut(s) 227
SetI ASST 5 cut(s) 33, 147, 180, 351, 373
Sse9I AATT 3 cut(s) 75, 192, 250
SsiI CCGC 1 cut(s) 159
StyD4I CCNGG 1 cut(s) 225
TaaI ACNGT 2 cut(s) 137, 169
TasI AATT 3 cut(s) 75, 192, 250
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 1 cut(s) 254
Tru9I TTAA 1 cut(s) 254
TseI GCWGC 2 cut(s) 302, 349
TspDTI ATGAA 4 cut(s) 53, 104, 132, 225
TspGWI ACGGA 1 cut(s) 26
Van91I CCANNNNNTGG 1 cut(s) 226
XapI RAATTY 1 cut(s) 75
XcmI CCANNNNNNNNNTGG 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.