Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006471

Physical Location & Seq

Genomic Coordinates Reverse (-)

17185694 .. 17190170

Gene Structure 4477 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012288

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1152 bp

ATGGATGTGTACTCTATGATCTTTATTTTGTCGCCTTTGTTCAGCTCCAACGGCGTGTTTGGCTCAAGCTGGGAGTCGTTTAGGACGGTTCCGTTAGAGGAGTCCAGGTCTCGGATCACCCATTTACCCGATTCAGAGTTGATGATTAGGTGGTTGGTGGAAATGCCAGAATCTTTGATCGGGAGATTGTTGCCGCGGACGACCCGGCCGATTCAGACCTTGGATCCGGAATCATTTTCATTGATTCCAGTGAAGAACCCTCAAAACCCATTGCTTTGCCGTTCTCCGGCTCAAAAGTCCTCCCTTTCATTCAAGAAATTTACTCCAATGGCTTCTCTGACCACCACCAACACCACCGTCGGCCTCTCCAAAACTTTCATCAAACTGAAGGAGCAAGGCAAGGTTGCATTAATCCCTTACATTACTGCCGGTGATCCTGATCTATCGGTCACCGCAGAAGCATTGAAGGTCCTGGATTCTTGTGGATCGGACATAATTGAATTAGGTGTGCCATACTCTGATCCATTAGCAGATGGGCCAGTTATACAGGCTGCAGCCACTCGTGCCTTGGCAAGAGGGACCAACTTGAATTCAATCCTGGCAATGTTGAAGGAGGTGATTCCCAAACTGTCCTGCCCAATTGCTCTCTTCACATACTACAATCCTATTTTGAAGCGTGGTGTTGGAGAGTTCATGTCCATCATTAAAGACGTCGGTGTACATGGACTTGTGGTTCCAGATGTTCCATTGGAAGAGACGGACATTCTGAGAAAGGAAGCCTTGAAAAATAATATTGAATTGGTATTACTAACTACACCCACCACTCCAATGGAGCGAATGAAGGCCATTGCTGAAGCTTCCGAAGGGTTTTTGTACCTGGTGAGCTCAATTGGAGTTACAGGGGCCCGGGCATCTGTGAATGAACGAGTTCCTGCCCTTTTAAAGGAAATTAAAGAGGCTACATCAAAGCCCGTAGCTGTTGGTTTTGGCATCTCCAAGCCTGAACAAGCTAAACAGGTAGCGGGGTGGGGAGCTGATGGTGTCATTGTTGGTAGCGCAATGGTGAAGCTGTTGGGTGATGCCAAAACTCCCGAGGAAGGGTTGAAGGAACTGGAAATTTTCACCGAGTCTCTGAAATCTGCACTCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004834 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009606 GO:0009607 GO:0009617 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0016043 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0019752 GO:0033036 GO:0033037 GO:0033554 GO:0034641 GO:0042221 GO:0042401 GO:0042430 GO:0042435 GO:0042545 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0046219 GO:0046394 GO:0046483 GO:0050896 GO:0051179 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0098542 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00400 ko00402 ko01100 ko01110 ko01130 ko01230 map00260 map00400 map00402 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Trp_syntA

Protein Analysis

384

Amino Acids

41.42

Weight (kDa)

5.95

Isoelectric Point (pI)

38.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trp_syntA	PF00290	126 - 381	1.7e-94	Tryptophan synthase alpha chain
His_biosynth	PF00977	299 - 356	4.7e-06	Histidine biosynthesis protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54640
fragaria_vesca	FvH4_2g22570
malus_domestica	MD05G1206300.v1.1 MD10G1193300.v1.1
prunus_persica	Prupe.8G232700_v2.0.a1
pyrus_communis	pycom05g19230 pycom10g16710
rosa_chinensis	RchiOBHm_Chr3g0488871 RchiOBHm_Chr6g0284041 RchiOBHm_Chr6g0289611
rosa_laevigata	RLG00000012288 RLG00000026432
rosa_multiflora	Rmu_co8332575.1_g000001 Rmu_sc0000607.1_g000042 Rmu_sc0001527.1_g000067 Rmu_sc0001850.1_g000026 Rmu_sc0005376.1_g000002
rosa_roxburghii	Rroxscaffold_1G00026080 Rroxscaffold_7G00177810
rosa_rugosa	Rorug06G0205100
rosa_samantha	Rh5AG506400 Rh6BG323300 Rh6CG329700 Rh6DG267800 Rh6DG315100
rosa_wichuraiana	Rw6G027310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	714
AccII	CGCG	1 cut(s)	196
AccIII	TCCGGA	1 cut(s)	226
AciI	CCGC	4 cut(s)	194, 196, 453, 1022
AclWI	GGATC	6 cut(s)	122, 218, 231, 428, 493, 515
AcoI	YGGCCR	1 cut(s)	206
AcsI	RAATTY	3 cut(s)	317, 589, 1116
AcuI	CTGAAG	2 cut(s)	407, 873
AcyI	GRCGYC	1 cut(s)	711
AfaI	GTAC	3 cut(s)	11, 720, 875
AfiI	CCNNNNNNNGG	5 cut(s)	111, 286, 943, 1097, 1098
AjnI	CCWGG	4 cut(s)	104, 471, 597, 876
AloI	GAACNNNNNNTCC	2 cut(s)	717, 749
AluBI	AGCT	8 cut(s)	45, 69, 857, 885, 977, 1010, 1034, 1069
AluI	AGCT	8 cut(s)	45, 69, 857, 885, 977, 1010, 1034, 1069
Alw21I	GWGCWC	1 cut(s)	887
Alw26I	GTCTC	3 cut(s)	114, 749, 1134
AlwI	GGATC	6 cut(s)	122, 218, 231, 428, 493, 515
Ama87I	CYCGRG	2 cut(s)	906, 1091
Aor13HI	TCCGGA	1 cut(s)	226
AoxI	GGCC	5 cut(s)	206, 361, 536, 843, 903
ApaI	GGGCCC	1 cut(s)	907
ApeKI	GCWGC	2 cut(s)	551, 554
ApoI	RAATTY	3 cut(s)	317, 589, 1116
AseI	ATTAAT	1 cut(s)	410
Asp700I	GAANNNNTTC	1 cut(s)	927
AspLEI	GCGC	1 cut(s)	1058
AspS9I	GGNCC	5 cut(s)	469, 536, 579, 903, 904
AsuC2I	CCSGG	3 cut(s)	205, 907, 908
AsuHPI	GGTGA	8 cut(s)	109, 442, 443, 628, 892, 1075, 1088, 1114
AvaI	CYCGRG	2 cut(s)	906, 1091
AvaII	GGWCC	2 cut(s)	469, 579
BaeGI	GKGCMC	1 cut(s)	907
BamHI	GGATCC	1 cut(s)	223
BanII	GRGCYC	2 cut(s)	887, 907
BauI	CACGAG	1 cut(s)	561
Bbv12I	GWGCWC	1 cut(s)	887
BbvI	GCAGC	2 cut(s)	538, 566
BccI	CCATC	3 cut(s)	527, 707, 1031
BceAI	ACGGC	2 cut(s)	67, 264
BciT130I	CCWGG	4 cut(s)	106, 473, 599, 878
BcnI	CCSGG	3 cut(s)	205, 907, 908
BcoDI	GTCTC	3 cut(s)	114, 749, 1134
BfmI	CTRYAG	1 cut(s)	552
BisI	GCNGC	3 cut(s)	194, 552, 555
BlsI	GCNGC	3 cut(s)	195, 553, 556
Bme1390I	CCNGG	7 cut(s)	106, 205, 473, 599, 878, 907, 908
Bme18I	GGWCC	2 cut(s)	469, 579
BmeT110I	CYCGRG	2 cut(s)	906, 1091
BmgT120I	GGNCC	5 cut(s)	469, 536, 579, 903, 904
BmiI	GGNNCC	6 cut(s)	90, 225, 580, 735, 904, 905
BmrFI	CCNGG	7 cut(s)	106, 205, 473, 599, 878, 907, 908
BmsI	GCATC	3 cut(s)	920, 999, 1069
BpuEI	CTTGAG	1 cut(s)	49
BpuMI	CCSGG	3 cut(s)	205, 907, 908
BsaBI	GATNNNNATC	1 cut(s)	438
BsaHI	GRCGYC	1 cut(s)	711
BsaI	GGTCTC	1 cut(s)	114
BsaJI	CCNNGG	5 cut(s)	194, 219, 567, 906, 1092
BsaWI	WCCGGW	1 cut(s)	226
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	5 cut(s)	111, 286, 943, 1097, 1098
Bse118I	RCCGGY	1 cut(s)	428
Bse1I	ACTGG	3 cut(s)	248, 539, 1116
Bse3DI	GCAATG	4 cut(s)	269, 609, 846, 1065
Bse8I	GATNNNNATC	1 cut(s)	438
BseAI	TCCGGA	1 cut(s)	226
BseBI	CCWGG	4 cut(s)	106, 473, 599, 878
BseDI	CCNNGG	5 cut(s)	194, 219, 567, 906, 1092
BseGI	GGATG	1 cut(s)	10
BseJI	GATNNNNATC	1 cut(s)	438
BseLI	CCNNNNNNNGG	5 cut(s)	111, 286, 943, 1097, 1098
BseMI	GCAATG	4 cut(s)	269, 609, 846, 1065
BseMII	CTCAG	1 cut(s)	758
BseNI	ACTGG	3 cut(s)	248, 539, 1116
BseRI	GAGGAG	1 cut(s)	113
BseSI	GKGCMC	1 cut(s)	907
BseX3I	CGGCCG	1 cut(s)	206
BseXI	GCAGC	2 cut(s)	538, 566
BseYI	CCCAGC	1 cut(s)	69
BsgI	GTGCAG	1 cut(s)	1125
Bsh1236I	CGCG	1 cut(s)	196
Bsh1285I	CGRYCG	1 cut(s)	209
BshFI	GGCC	5 cut(s)	208, 363, 538, 845, 905
BsiEI	CGRYCG	1 cut(s)	209
BsiHKAI	GWGCWC	1 cut(s)	887
BsiHKCI	CYCGRG	2 cut(s)	906, 1091
BsiSI	CCGG	5 cut(s)	205, 227, 287, 429, 907
BslFI	GGGAC	1 cut(s)	592
BslI	CCNNNNNNNGG	5 cut(s)	111, 286, 943, 1097, 1098
BsmAI	GTCTC	3 cut(s)	114, 749, 1134
BsmBI	CGTCTC	1 cut(s)	749
BsmFI	GGGAC	1 cut(s)	592
BsnI	GGCC	5 cut(s)	208, 363, 538, 845, 905
Bso31I	GGTCTC	1 cut(s)	114
BsoBI	CYCGRG	2 cut(s)	906, 1091
Bsp120I	GGGCCC	1 cut(s)	903
Bsp1286I	GDGCHC	2 cut(s)	887, 907
Bsp13I	TCCGGA	1 cut(s)	226
Bsp1407I	TGTACA	1 cut(s)	718
Bsp143I	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
BspACI	CCGC	4 cut(s)	194, 196, 453, 1022
BspANI	GGCC	5 cut(s)	208, 363, 538, 845, 905
BspCNI	CTCAG	1 cut(s)	759
BspEI	TCCGGA	1 cut(s)	226
BspFNI	CGCG	1 cut(s)	196
BspLI	GGNNCC	6 cut(s)	90, 225, 580, 735, 904, 905
BspMAI	CTGCAG	1 cut(s)	556
BspPI	GGATC	6 cut(s)	122, 218, 231, 428, 493, 515
BspTNI	GGTCTC	1 cut(s)	114
BsrDI	GCAATG	4 cut(s)	269, 609, 846, 1065
BsrFI	RCCGGY	1 cut(s)	428
BsrGI	TGTACA	1 cut(s)	718
BsrI	ACTGG	3 cut(s)	248, 539, 1116
BssAI	RCCGGY	1 cut(s)	428
BssECI	CCNNGG	5 cut(s)	194, 219, 567, 906, 1092
BssMI	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
BssNI	GRCGYC	1 cut(s)	711
BssSI	CACGAG	1 cut(s)	561
BssT1I	CCWWGG	2 cut(s)	219, 567
Bst2BI	CACGAG	1 cut(s)	561
Bst2UI	CCWGG	4 cut(s)	106, 473, 599, 878
Bst4CI	ACNGT	3 cut(s)	88, 358, 630
Bst6I	CTCTTC	2 cut(s)	653, 747
BstACI	GRCGYC	1 cut(s)	711
BstAUI	TGTACA	1 cut(s)	718
BstDEI	CTNAG	1 cut(s)	767
BstDSI	CCRYGG	1 cut(s)	194
BstEII	GGTNACC	1 cut(s)	448
BstENI	CCTNNNNNAGG	1 cut(s)	941
BstF5I	GGATG	1 cut(s)	10
BstFNI	CGCG	1 cut(s)	196
BstHHI	GCGC	1 cut(s)	1058
BstKTI	GATC	8 cut(s)	21, 117, 180, 226, 436, 442, 488, 523
BstMAI	GTCTC	3 cut(s)	114, 749, 1134
BstMBI	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
BstMCI	CGRYCG	1 cut(s)	209
BstMWI	GCNNNNNNNGC	3 cut(s)	51, 60, 563
BstNI	CCWGG	4 cut(s)	106, 473, 599, 878
BstPI	GGTNACC	1 cut(s)	448
BstSCI	CCNGG	7 cut(s)	104, 203, 471, 597, 876, 905, 906
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	1 cut(s)	907
BstUI	CGCG	1 cut(s)	196
BstV1I	GCAGC	2 cut(s)	538, 566
BstX2I	RGATCY	1 cut(s)	223
BstXI	CCANNNNNNTGG	1 cut(s)	829
BstYI	RGATCY	1 cut(s)	223
BstZI	CGGCCG	1 cut(s)	206
BsuRI	GGCC	5 cut(s)	208, 363, 538, 845, 905
BtgI	CCRYGG	1 cut(s)	194
BtsCI	GGATG	1 cut(s)	10
BtsIMutI	CAGTG	1 cut(s)	255
CfoI	GCGC	1 cut(s)	1058
Cfr10I	RCCGGY	1 cut(s)	428
Cfr13I	GGNCC	5 cut(s)	469, 536, 579, 903, 904
Cfr42I	CCGCGG	1 cut(s)	197
Cfr9I	CCCGGG	1 cut(s)	906
CsiI	ACCWGGT	1 cut(s)	876
Csp6I	GTAC	3 cut(s)	10, 719, 874
CviAII	CATG	2 cut(s)	694, 722
CviQI	GTAC	3 cut(s)	10, 719, 874
DdeI	CTNAG	1 cut(s)	767
DpnI	GATC	8 cut(s)	20, 116, 179, 225, 435, 441, 487, 522
DpnII	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
DraI	TTTAAA	1 cut(s)	942
EaeI	YGGCCR	1 cut(s)	206
EagI	CGGCCG	1 cut(s)	206
Eam1104I	CTCTTC	2 cut(s)	653, 747
EarI	CTCTTC	2 cut(s)	653, 747
Ecl136II	GAGCTC	1 cut(s)	885
EclXI	CGGCCG	1 cut(s)	206
Eco130I	CCWWGG	2 cut(s)	219, 567
Eco24I	GRGCYC	2 cut(s)	887, 907
Eco31I	GGTCTC	1 cut(s)	114
Eco47I	GGWCC	2 cut(s)	469, 579
Eco52I	CGGCCG	1 cut(s)	206
Eco53kI	GAGCTC	1 cut(s)	885
Eco57I	CTGAAG	2 cut(s)	407, 873
Eco88I	CYCGRG	2 cut(s)	906, 1091
Eco91I	GGTNACC	1 cut(s)	448
EcoICRI	GAGCTC	1 cut(s)	885
EcoNI	CCTNNNNNAGG	1 cut(s)	941
EcoO109I	RGGNCCY	2 cut(s)	469, 903
EcoO65I	GGTNACC	1 cut(s)	448
EcoRI	GAATTC	1 cut(s)	589
EcoRII	CCWGG	4 cut(s)	104, 471, 597, 876
EcoT14I	CCWWGG	2 cut(s)	219, 567
EcoT38I	GRGCYC	2 cut(s)	887, 907
ErhI	CCWWGG	2 cut(s)	219, 567
Esp3I	CGTCTC	1 cut(s)	749
FaeI	CATG	2 cut(s)	697, 725
FaiI	YATR	7 cut(s)	17, 494, 514, 545, 655, 695, 723
FalI	AAGNNNNNCTT	2 cut(s)	764, 796
FaqI	GGGAC	1 cut(s)	592
FatI	CATG	2 cut(s)	693, 721
FauI	CCCGC	1 cut(s)	1015
Fnu4HI	GCNGC	3 cut(s)	194, 552, 555
FokI	GGATG	1 cut(s)	17
FriOI	GRGCYC	2 cut(s)	887, 907
Fsp4HI	GCNGC	3 cut(s)	194, 552, 555
GlaI	GCGC	1 cut(s)	1057
GluI	GCNGC	3 cut(s)	194, 552, 555
GsaI	CCCAGC	1 cut(s)	73
HaeIII	GGCC	5 cut(s)	208, 363, 538, 845, 905
HapII	CCGG	5 cut(s)	205, 227, 287, 429, 907
HhaI	GCGC	1 cut(s)	1058
Hin1I	GRCGYC	1 cut(s)	711
Hin1II	CATG	2 cut(s)	697, 725
Hin6I	GCGC	1 cut(s)	1056
HinP1I	GCGC	1 cut(s)	1056
HindIII	AAGCTT	1 cut(s)	855
HpaII	CCGG	5 cut(s)	205, 227, 287, 429, 907
HphI	GGTGA	8 cut(s)	109, 442, 443, 628, 892, 1075, 1088, 1114
Hpy166II	GTNNAC	2 cut(s)	10, 719
Hpy188I	TCNGA	9 cut(s)	114, 136, 216, 339, 490, 520, 768, 862, 1134
Hpy188III	TCNNGA	6 cut(s)	181, 227, 313, 437, 737, 1091
Hpy8I	GTNNAC	2 cut(s)	10, 719
Hpy99I	CGWCG	2 cut(s)	362, 716
HpyAV	CCTTC	7 cut(s)	382, 460, 604, 835, 857, 1091, 1099
HpyCH4III	ACNGT	3 cut(s)	88, 358, 630
HpyCH4IV	ACGT	1 cut(s)	711
HpyCH4V	TGCA	3 cut(s)	407, 554, 1142
HpyF10VI	GCNNNNNNNGC	3 cut(s)	51, 60, 563
HpyF3I	CTNAG	1 cut(s)	767
HpySE526I	ACGT	1 cut(s)	711
Hsp92I	GRCGYC	1 cut(s)	711
Hsp92II	CATG	2 cut(s)	697, 725
HspAI	GCGC	1 cut(s)	1056
Kpn2I	TCCGGA	1 cut(s)	226
KspI	CCGCGG	1 cut(s)	197
Kzo9I	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
LmnI	GCTCC	4 cut(s)	50, 391, 832, 1031
Lsp1109I	GCAGC	2 cut(s)	538, 566
LweI	GCATC	3 cut(s)	920, 999, 1069
MabI	ACCWGGT	1 cut(s)	876
MaeII	ACGT	1 cut(s)	711
MaeIII	GTNAC	2 cut(s)	448, 895
MalI	GATC	8 cut(s)	20, 116, 179, 225, 435, 441, 487, 522
MboI	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
MboII	GAAGA	3 cut(s)	265, 640, 764
MfeI	CAATTG	2 cut(s)	639, 888
MflI	RGATCY	1 cut(s)	223
MhlI	GDGCHC	2 cut(s)	887, 907
MluCI	AATT	9 cut(s)	317, 495, 500, 589, 639, 797, 888, 948, 1116
MlyI	GAGTC	3 cut(s)	83, 110, 1136
MmeI	TCCRAC	2 cut(s)	72, 664
MnlI	CCTC	8 cut(s)	91, 270, 310, 374, 569, 607, 949, 1087
MroI	TCCGGA	1 cut(s)	226
MroXI	GAANNNNTTC	1 cut(s)	927
MseI	TTAA	4 cut(s)	410, 705, 941, 951
MslI	CAYNNNNRTG	1 cut(s)	827
MspA1I	CMGCKG	1 cut(s)	196
MspI	CCGG	5 cut(s)	205, 227, 287, 429, 907
MspR9I	CCNGG	7 cut(s)	106, 205, 473, 599, 878, 907, 908
MunI	CAATTG	2 cut(s)	639, 888
MvaI	CCWGG	4 cut(s)	106, 473, 599, 878
MvnI	CGCG	1 cut(s)	196
MwoI	GCNNNNNNNGC	3 cut(s)	51, 60, 563
NciI	CCSGG	3 cut(s)	205, 907, 908
NdeII	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
NlaIII	CATG	2 cut(s)	697, 725
NlaIV	GGNNCC	6 cut(s)	90, 225, 580, 735, 904, 905
NmuCI	GTSAC	1 cut(s)	448
PcsI	WCGNNNNNNNCGW	1 cut(s)	206
PdmI	GAANNNNTTC	1 cut(s)	927
PfeI	GAWTC	7 cut(s)	131, 170, 211, 230, 244, 476, 619
PfoI	TCCNGGA	1 cut(s)	471
PkrI	GCNGC	3 cut(s)	195, 553, 556
PleI	GAGTC	3 cut(s)	82, 109, 1135
PpsI	GAGTC	3 cut(s)	82, 109, 1135
PpuMI	RGGWCCY	1 cut(s)	469
PshBI	ATTAAT	1 cut(s)	410
Psp124BI	GAGCTC	1 cut(s)	887
Psp5II	RGGWCCY	1 cut(s)	469
Psp6I	CCWGG	4 cut(s)	104, 471, 597, 876
PspEI	GGTNACC	1 cut(s)	448
PspFI	CCCAGC	1 cut(s)	69
PspGI	CCWGG	4 cut(s)	104, 471, 597, 876
PspN4I	GGNNCC	6 cut(s)	90, 225, 580, 735, 904, 905
PspOMI	GGGCCC	1 cut(s)	903
PspPI	GGNCC	5 cut(s)	469, 536, 579, 903, 904
PspPPI	RGGWCCY	1 cut(s)	469
PstI	CTGCAG	1 cut(s)	556
PsuI	RGATCY	1 cut(s)	223
RsaI	GTAC	3 cut(s)	11, 720, 875
RsaNI	GTAC	3 cut(s)	10, 719, 874
RseI	CAYNNNNRTG	1 cut(s)	827
SacI	GAGCTC	1 cut(s)	887
SacII	CCGCGG	1 cut(s)	197
SaqAI	TTAA	4 cut(s)	410, 705, 941, 951
SatI	GCNGC	3 cut(s)	194, 552, 555
Sau3AI	GATC	8 cut(s)	18, 114, 177, 223, 433, 439, 485, 520
Sau96I	GGNCC	5 cut(s)	469, 536, 579, 903, 904
SchI	GAGTC	3 cut(s)	83, 110, 1136
ScrFI	CCNGG	7 cut(s)	106, 205, 473, 599, 878, 907, 908
SduI	GDGCHC	2 cut(s)	887, 907
SexAI	ACCWGGT	1 cut(s)	876
SfaNI	GCATC	3 cut(s)	920, 999, 1069
SfcI	CTRYAG	1 cut(s)	552
Sfr303I	CCGCGG	1 cut(s)	197
SgrBI	CCGCGG	1 cut(s)	197
SinI	GGWCC	2 cut(s)	469, 579
SmaI	CCCGGG	1 cut(s)	908
SmiMI	CAYNNNNRTG	1 cut(s)	827
SmlI	CTYRAG	1 cut(s)	64
SmoI	CTYRAG	1 cut(s)	64
SrfI	GCCCGGGC	1 cut(s)	908
Sse9I	AATT	9 cut(s)	317, 495, 500, 589, 639, 797, 888, 948, 1116
SsiI	CCGC	4 cut(s)	194, 196, 453, 1022
SspI	AATATT	1 cut(s)	793
SstI	GAGCTC	1 cut(s)	887
StyD4I	CCNGG	7 cut(s)	104, 203, 471, 597, 876, 905, 906
StyI	CCWWGG	2 cut(s)	219, 567
TaaI	ACNGT	3 cut(s)	88, 358, 630
TaiI	ACGT	1 cut(s)	714
TaqII	GACCGA	1 cut(s)	436
TasI	AATT	9 cut(s)	317, 495, 500, 589, 639, 797, 888, 948, 1116
TatI	WGTACW	2 cut(s)	9, 718
TauI	GCSGC	1 cut(s)	196
TfiI	GAWTC	7 cut(s)	131, 170, 211, 230, 244, 476, 619
Tru1I	TTAA	4 cut(s)	410, 705, 941, 951
Tru9I	TTAA	4 cut(s)	410, 705, 941, 951
TscAI	CASTG	1 cut(s)	255
TseFI	GTSAC	1 cut(s)	448
TseI	GCWGC	2 cut(s)	551, 554
Tsp45I	GTSAC	1 cut(s)	448
TspDTI	ATGAA	6 cut(s)	228, 297, 367, 682, 854, 936
TspGWI	ACGGA	2 cut(s)	81, 773
TspMI	CCCGGG	1 cut(s)	906
TspRI	CASTG	1 cut(s)	255
VpaK11BI	GGWCC	2 cut(s)	469, 579
VspI	ATTAAT	1 cut(s)	410
XagI	CCTNNNNNAGG	1 cut(s)	941
XapI	RAATTY	3 cut(s)	317, 589, 1116
XcmI	CCANNNNNNNNNTGG	2 cut(s)	565, 826
XmaI	CCCGGG	1 cut(s)	906
XmnI	GAANNNNTTC	1 cut(s)	927
ZraI	GACGTC	1 cut(s)	712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.