Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008889

Physical Location & Seq

Genomic Coordinates Reverse (-)

51621004 .. 51624852

Gene Structure 3849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014334

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGACGACTCCTGGAGGCTCTTCTTCTTGCACTCATTCATGGAGTCATGATGTCTTTCTGAGTTTTAGAGGCGCGGATACACGGTACAATTTTACATGCCATTTGCGCAACTATTTGCTTCACAAGGGGATCAACACCTTCATGGATGATGATGAGCTCAACAGAGGAGAGGAAATAACTCCGGCTCTTCTGAAAGCAATTGAAGAATCAAGGATTTCTCTCATAGTGTTTTCTGAAAAGTATGCATTCTCAGAGTGGTGCCTCGATGAACTCGCACATATCCTTGACTGTCGGAAGTCAAAGGAACAAACAGTATACCCTGTGTTTTACAAAGTAACTCCGTCCGATGTTCGGAACCAAAAAGGTAGTTTTGGTCAGGCACTTGCTCTCCATGAATGCAGATTCAAGGATGACCCGGAGAGGGTGGTGAAATGGAAGGGAGCTCTCGTAGAGGCCTCAAATTTGGCTGGATGGGAGTACAAGGATGGTGATAAGATGTGTTGTATGCTATCTTTAATTGGCAGGTATGAATCAACATTCATTGATATCATTGTTGAACAGATTTCTATGCAAGTGTGTTGTCATGCCGATTTTATAGTTGCAGAATACCCAGTTGGAATAGAGCGTCGGCTAAAGGAAATGCAGGATCTCTTAGAAGTTGGGTCAAATGATGTTCGTATGATAGGGATATGGGGGACTGCTGGAATAGGTAAGACAACAATTGCCAAGGCTGTTTATAATTCCCTTGCCTGTAAGTTCGATGCTTGCTGTTTTCTAGAAAATGTTGCAACGCAACTTGGTGGTCCAGTCAAACTACGAAAGAAGCTTCTGTCGAAGATCCTAAGGGTGAAAGAATCCGATCTGATGACTGAAGCCTGTGAAGGAATGAATGCGATAAAGAGCAAGTTAAGCAGCAGAAAAGTTCTCTTAATTCTGGATGATGTGGATCAATTGGAACAGTTGACAAATTTAGTTGGAAAGACTGAGTGGTTTGGTTTGGGCAGTAGAATTGTCATAACAACAAGAGATAAACGCATATTAGCTGCTCATGGTGTCAGAAAGGACCTAATATACAAGCCGAAGGAGTTAGATGAACATGAAGCTTTAGAGCTCTTCAGGGCATTTGCCTTTCCACAAGAAAGTCTCCCGGATTGTTATGCACAACTCGCAAAGGATGCATTAGAATATGCTCAAGGTCTTCCGTTAGCTCTGCGCTACTTAGGTGAGTTATTATATGCTAGAACTGTAGAGGAATGGAAGGAGGAATTAGAGAGTCATAGGAAATCTCTTGATGCCCATCTTTACGAGACTCTCAAAAGAAGTTACAATGCATTGGAAGATCCGGCGAAGGAAGTTTTCCTTGACATTGCATGTTTCTTTAAAGGTAAACTCAAGAATGATGTGATACAATTACTAGAAGGAGGTGACCACAAACCTAGAAATAGTATCAAAGATCTTGAAGAAAAGGCCCTCATAAATATTCAAAATGAATATATTTGTATGCACAACCTGCTAGAGGTACTGGCTAAGAAAATAGTTGACAAGGAGTCACCATCTGAGCCTGGCAAACGCAGCAGATTGTGGTTTTTGGACGACGTTTATAAGATTCTATCAAAAGGCAAAAGATTAACAAATTTGAAATGTATAAATCTGGAGTACTGCAAATTCCTCAAAGAAATCCCCAACTTCTCTGAATTCCCAAATTTAAGGGACTTGAATCTGAACTATTGTACAAGTCTAGTTGAGGTTGATGATTCTGTTGGAGCCCTACATAACCTTGTTGTTTTGAGTCTCTCTGGATGCCACAAGCTTGTTCGTTTTCCAACAAGAATCGCCTTGAAATCTGTAAAACGAATAATTTTCAGAGACTGCAGAAATCTCACGGCTTTGCCTGCAATTGTTCAAAAGATGGAATTCTTAACATTGTTGGACCTATCTGGTACTGGTATCAAAGAGTTGTCTGATGTATCAATTAGGTACCTCATAAGCCTTCAGCAGTTAAGTCTAAGGGAGTGTGAAAGCTTAACTAGTCTGCCATGCAGCATTTATGAGTTGCAACATCTGTGGTATCTTGATCTCTACAAGTGCTCAAAACTTGTGGCTCTCCCAGAATGGAATGCGGAAGTGCTTCCAACTGACTTGAATTCTTCAAATAAGCAGTCTGAATTTGAAGTTGTATTTCCTGGAAGTGACATTCCAAAGTGGTTCAGTCATAGCAAGAAGTTGAAGGAGCTGACTGAAGAATCGAAATTTTCTTTTGAAATACCTCGAAATTTCAGATTGCAGAACCAAGGATTGGCTATCTGTGCTGCAGCTGAAGTGGTTGGGAGAATTAACCCAAAAGGACAAAATAATTGCTCTGTCACAGCCACAATTGACATCAATGCAGGAAGCAAAATAGCACATTCGTTTCATTTTGATGGGAAAATCATGAAATCAGGTCATGTGTTGCTGTGCTACATTCCATTCATTATTTTTAGACGTTTCCTATCACCCCCTTTTACTTGTGGAGTTACTTTGGAACATAAAAGCCAAGGTGCGGTGCGGTGCATAAGTTATGGGGTCCACTTGGTGATGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC TIR

Protein Analysis

861

Amino Acids

97.67

Weight (kDa)

7.05

Isoelectric Point (pI)

38.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	16 - 164	2.6e-48	TIR domain
TIR_2	PF13676	18 - 113	2.8e-14	TIR domain
NB-ARC	PF00931	214 - 380	1.3e-19	NB-ARC domain
WHD_ROQ1	PF23282	449 - 516	1.3e-09	Disease resistance protein Roq1-like, winged-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008889)

Species	Orthologous Gene IDs
prunus_persica	Prupe.8G110000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0262301 RchiOBHm_Chr6g0262321
rosa_laevigata	RLG00000014024 RLG00000014034 RLG00000014334 RLG00000014342 RLG00000035301
rosa_multiflora	Rmu_sc0000565.1_g000041 Rmu_sc0002938.1_g000003 Rmu_sc0002938.1_g000011 Rmu_ssc0000388.1_g000023
rosa_roxburghii	Rroxscaffold_7G00201070 Rroxscaffold_7G00201110 Rroxscaffold_7G00204190 Rroxscaffold_7G00204430
rosa_rugosa	Rorug06G0029600 Rorug06G0029800
rosa_samantha	Rh1AG095400 Rh1AG095600 Rh6AG151300 Rh6DG136200
rosa_wichuraiana	Rw6G013100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	738, 1602
Acc16I	TGCGCA	1 cut(s)	107
Acc36I	ACCTGC	2 cut(s)	513, 1518
Acc65I	GGTACC	1 cut(s)	1977
AccB1I	GGYRCC	2 cut(s)	258, 1977
AccB7I	CCANNNNNTGG	1 cut(s)	2296
AccI	GTMKAC	1 cut(s)	315
AccII	CGCG	1 cut(s)	74
AciI	CCGC	4 cut(s)	74, 2120, 2540, 2545
AclWI	GGATC	5 cut(s)	137, 654, 832, 954, 1334
AcuI	CTGAAG	5 cut(s)	891, 1099, 1976, 2259, 2337
AdeI	CACNNNGTG	1 cut(s)	2572
AfaI	GTAC	7 cut(s)	86, 479, 1521, 1658, 1732, 1942, 1979
AfiI	CCNNNNNNNGG	5 cut(s)	351, 421, 1516, 2296, 2539
AhdI	GACNNNNNGTC	1 cut(s)	1546
AhlI	ACTAGT	1 cut(s)	2027
AjnI	CCWGG	3 cut(s)	10, 1561, 2182
AjuI	GAANNNNNNNTTGG	4 cut(s)	597, 629, 2279, 2311
Alw21I	GWGCWC	4 cut(s)	159, 445, 1113, 2090
Alw26I	GTCTC	4 cut(s)	1148, 1301, 1796, 1860
AlwI	GGATC	5 cut(s)	137, 654, 832, 954, 1334
AlwNI	CAGNNNCTG	1 cut(s)	1869
AoxI	GGCC	2 cut(s)	453, 1467
ApeKI	GCWGC	6 cut(s)	912, 1043, 1572, 2040, 2309, 2312
ArsI	GACNNNNNNTTYG	2 cut(s)	2144, 2176
Asp700I	GAANNNNTTC	1 cut(s)	2127
Asp718I	GGTACC	1 cut(s)	1977
AspLEI	GCGC	3 cut(s)	74, 108, 1215
AspS9I	GGNCC	5 cut(s)	803, 1063, 1468, 1930, 2563
AsuC2I	CCSGG	2 cut(s)	416, 1148
AsuHPI	GGTGA	7 cut(s)	439, 500, 859, 1235, 1436, 1542, 2484
AvaII	GGWCC	4 cut(s)	803, 1063, 1930, 2563
AxyI	CCTNAGG	1 cut(s)	842
BanI	GGYRCC	2 cut(s)	258, 1977
BanII	GRGCYC	4 cut(s)	159, 445, 1113, 1768
BbsI	GAAGAC	1 cut(s)	1190
Bbv12I	GWGCWC	4 cut(s)	159, 445, 1113, 2090
BbvI	GCAGC	6 cut(s)	924, 1030, 1584, 2052, 2296, 2324
BccI	CCATC	6 cut(s)	465, 479, 1305, 1561, 1903, 2414
BceAI	ACGGC	1 cut(s)	1899
BciT130I	CCWGG	3 cut(s)	12, 1563, 2184
BciVI	GTATCC	1 cut(s)	70
BcnI	CCSGG	2 cut(s)	416, 1148
BcoDI	GTCTC	4 cut(s)	1148, 1301, 1796, 1860
BcuI	ACTAGT	1 cut(s)	2027
BfaI	CTAG	7 cut(s)	776, 1239, 1415, 1437, 1514, 1739, 2028
BfmI	CTRYAG	3 cut(s)	1245, 1870, 2310
BfuAI	ACCTGC	2 cut(s)	513, 1518
BfuI	GTATCC	1 cut(s)	70
BglII	AGATCT	1 cut(s)	1453
BisI	GCNGC	6 cut(s)	913, 1044, 1573, 2041, 2310, 2313
BlsI	GCNGC	6 cut(s)	914, 1045, 1574, 2042, 2311, 2314
BmcAI	AGTACT	1 cut(s)	1658
Bme1390I	CCNGG	5 cut(s)	12, 416, 1148, 1563, 2184
Bme18I	GGWCC	4 cut(s)	803, 1063, 1930, 2563
BmeRI	GACNNNNNGTC	1 cut(s)	1546
BmgT120I	GGNCC	5 cut(s)	803, 1063, 1468, 1930, 2563
BmiI	GGNNCC	5 cut(s)	260, 356, 1765, 1979, 2564
BmrFI	CCNGG	5 cut(s)	12, 416, 1148, 1563, 2184
BmrI	ACTGGG	1 cut(s)	605
BmsI	GCATC	4 cut(s)	751, 1165, 1282, 1790
BmuI	ACTGGG	1 cut(s)	605
BpiI	GAAGAC	1 cut(s)	1190
BpmI	CTGGAG	2 cut(s)	33, 1673
BpuEI	CTTGAG	2 cut(s)	1176, 1376
BpuMI	CCSGG	2 cut(s)	416, 1148
BsaBI	GATNNNNATC	2 cut(s)	945, 1296
BsaJI	CCNNGG	3 cut(s)	726, 2290, 2533
BsaXI	ACNNNNNCTCC	4 cut(s)	372, 402, 432, 462
Bsc4I	CCNNNNNNNGG	5 cut(s)	351, 421, 1516, 2296, 2539
Bse1I	ACTGG	4 cut(s)	611, 806, 1527, 1948
Bse21I	CCTNAGG	1 cut(s)	842
Bse3DI	GCAATG	1 cut(s)	1365
Bse8I	GATNNNNATC	2 cut(s)	945, 1296
BseBI	CCWGG	3 cut(s)	12, 1563, 2184
BseDI	CCNNGG	3 cut(s)	726, 2290, 2533
BseGI	GGATG	7 cut(s)	151, 415, 476, 490, 943, 1180, 1805
BseJI	GATNNNNATC	2 cut(s)	945, 1296
BseLI	CCNNNNNNNGG	5 cut(s)	351, 421, 1516, 2296, 2539
BseMI	GCAATG	1 cut(s)	1365
BseMII	CTCAG	4 cut(s)	50, 264, 975, 1548
BseNI	ACTGG	4 cut(s)	611, 806, 1527, 1948
BseRI	GAGGAG	1 cut(s)	180
BseXI	GCAGC	6 cut(s)	924, 1030, 1584, 2052, 2296, 2324
Bsh1236I	CGCG	1 cut(s)	74
BshFI	GGCC	2 cut(s)	455, 1469
BshNI	GGYRCC	2 cut(s)	258, 1977
BsiHKAI	GWGCWC	4 cut(s)	159, 445, 1113, 2090
BsiSI	CCGG	4 cut(s)	182, 416, 1148, 1343
BslFI	GGGAC	2 cut(s)	709, 1724
BslI	CCNNNNNNNGG	5 cut(s)	351, 421, 1516, 2296, 2539
BsmAI	GTCTC	4 cut(s)	1148, 1301, 1796, 1860
BsmFI	GGGAC	2 cut(s)	709, 1724
BsmI	GAATGC	4 cut(s)	245, 401, 895, 2122
BsnI	GGCC	2 cut(s)	455, 1469
Bsp1286I	GDGCHC	5 cut(s)	159, 445, 1113, 1768, 2090
Bsp1407I	TGTACA	1 cut(s)	1730
Bsp143I	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
BspACI	CCGC	4 cut(s)	74, 2120, 2540, 2545
BspANI	GGCC	2 cut(s)	455, 1469
BspCNI	CTCAG	4 cut(s)	51, 263, 976, 1549
BspFNI	CGCG	1 cut(s)	74
BspHI	TCATGA	3 cut(s)	46, 2430, 2579
BspLI	GGNNCC	5 cut(s)	260, 356, 1765, 1979, 2564
BspMAI	CTGCAG	2 cut(s)	1874, 2314
BspMI	ACCTGC	2 cut(s)	513, 1518
BspPI	GGATC	5 cut(s)	137, 654, 832, 954, 1334
BspQI	GCTCTTC	3 cut(s)	25, 192, 1118
BspT107I	GGYRCC	2 cut(s)	258, 1977
BsrDI	GCAATG	1 cut(s)	1365
BsrGI	TGTACA	1 cut(s)	1730
BsrI	ACTGG	4 cut(s)	611, 806, 1527, 1948
BssECI	CCNNGG	3 cut(s)	726, 2290, 2533
BssMI	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
BssNAI	GTATAC	1 cut(s)	316
BssT1I	CCWWGG	3 cut(s)	726, 2290, 2533
Bst1107I	GTATAC	1 cut(s)	316
Bst2UI	CCWGG	3 cut(s)	12, 1563, 2184
Bst4CI	ACNGT	5 cut(s)	84, 290, 313, 960, 1246
Bst6I	CTCTTC	3 cut(s)	25, 192, 1118
BstAPI	GCANNNNNTGC	2 cut(s)	1175, 1510
BstAUI	TGTACA	1 cut(s)	1730
BstC8I	GCNNGC	2 cut(s)	766, 1893
BstDEI	CTNAG	9 cut(s)	59, 250, 652, 842, 984, 1219, 1527, 1557, 2006
BstEII	GGTNACC	1 cut(s)	1424
BstENI	CCTNNNNNAGG	1 cut(s)	1514
BstF5I	GGATG	7 cut(s)	151, 415, 476, 490, 943, 1180, 1805
BstFNI	CGCG	1 cut(s)	74
BstHHI	GCGC	3 cut(s)	74, 108, 1215
BstKTI	GATC	8 cut(s)	132, 649, 840, 862, 949, 1342, 1456, 2077
BstMAI	GTCTC	4 cut(s)	1148, 1301, 1796, 1860
BstMBI	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
BstMWI	GCNNNNNNNGC	8 cut(s)	105, 909, 1166, 1175, 1510, 1572, 1892, 2306
BstNI	CCWGG	3 cut(s)	12, 1563, 2184
BstNSI	RCATGY	2 cut(s)	99, 1374
BstPI	GGTNACC	1 cut(s)	1424
BstSCI	CCNGG	5 cut(s)	10, 414, 1146, 1561, 2182
BstSFI	CTRYAG	3 cut(s)	1245, 1870, 2310
BstUI	CGCG	1 cut(s)	74
BstV1I	GCAGC	6 cut(s)	924, 1030, 1584, 2052, 2296, 2324
BstV2I	GAAGAC	1 cut(s)	1190
BstX2I	RGATCY	4 cut(s)	646, 837, 1339, 1453
BstYI	RGATCY	4 cut(s)	646, 837, 1339, 1453
BstZ17I	GTATAC	1 cut(s)	316
Bsu36I	CCTNAGG	1 cut(s)	842
BsuI	GTATCC	1 cut(s)	70
BsuRI	GGCC	2 cut(s)	455, 1469
BtsCI	GGATG	7 cut(s)	151, 415, 476, 490, 943, 1180, 1805
BveI	ACCTGC	2 cut(s)	513, 1518
Cac8I	GCNNGC	2 cut(s)	766, 1893
CaiI	CAGNNNCTG	1 cut(s)	1869
CciI	TCATGA	3 cut(s)	46, 2430, 2579
CfoI	GCGC	3 cut(s)	74, 108, 1215
Cfr13I	GGNCC	5 cut(s)	803, 1063, 1468, 1930, 2563
CseI	GACGC	1 cut(s)	614
Csp6I	GTAC	7 cut(s)	85, 478, 1520, 1657, 1731, 1941, 1978
CspCI	CAANNNNNGTGG	4 cut(s)	2045, 2079, 2080, 2114
CviQI	GTAC	7 cut(s)	85, 478, 1520, 1657, 1731, 1941, 1978
DdeI	CTNAG	9 cut(s)	59, 250, 652, 842, 984, 1219, 1527, 1557, 2006
DpnI	GATC	8 cut(s)	131, 648, 839, 861, 948, 1341, 1455, 2076
DpnII	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
DraI	TTTAAA	1 cut(s)	1381
DraIII	CACNNNGTG	1 cut(s)	2572
DriI	GACNNNNNGTC	1 cut(s)	1546
Eam1104I	CTCTTC	3 cut(s)	25, 192, 1118
Eam1105I	GACNNNNNGTC	1 cut(s)	1546
EarI	CTCTTC	3 cut(s)	25, 192, 1118
Ecl136II	GAGCTC	3 cut(s)	157, 443, 1111
Eco130I	CCWWGG	3 cut(s)	726, 2290, 2533
Eco147I	AGGCCT	1 cut(s)	455
Eco24I	GRGCYC	4 cut(s)	159, 445, 1113, 1768
Eco32I	GATATC	1 cut(s)	547
Eco47I	GGWCC	4 cut(s)	803, 1063, 1930, 2563
Eco53kI	GAGCTC	3 cut(s)	157, 443, 1111
Eco57I	CTGAAG	5 cut(s)	891, 1099, 1976, 2259, 2337
Eco81I	CCTNAGG	1 cut(s)	842
Eco91I	GGTNACC	1 cut(s)	1424
EcoICRI	GAGCTC	3 cut(s)	157, 443, 1111
EcoNI	CCTNNNNNAGG	1 cut(s)	1514
EcoO109I	RGGNCCY	2 cut(s)	1063, 1468
EcoO65I	GGTNACC	1 cut(s)	1424
EcoRI	GAATTC	3 cut(s)	1694, 1913, 2143
EcoRII	CCWGG	3 cut(s)	10, 1561, 2182
EcoRV	GATATC	1 cut(s)	547
EcoT14I	CCWWGG	3 cut(s)	726, 2290, 2533
EcoT22I	ATGCAT	3 cut(s)	247, 1180, 1333
EcoT38I	GRGCYC	4 cut(s)	159, 445, 1113, 1768
ErhI	CCWWGG	3 cut(s)	726, 2290, 2533
FalI	AAGNNNNNCTT	2 cut(s)	1344, 1376
FaqI	GGGAC	2 cut(s)	709, 1724
FblI	GTMKAC	1 cut(s)	315
Fnu4HI	GCNGC	6 cut(s)	913, 1044, 1573, 2041, 2310, 2313
FokI	GGATG	7 cut(s)	158, 422, 483, 497, 950, 1187, 1812
FriOI	GRGCYC	4 cut(s)	159, 445, 1113, 1768
Fsp4HI	GCNGC	6 cut(s)	913, 1044, 1573, 2041, 2310, 2313
FspBI	CTAG	7 cut(s)	776, 1239, 1415, 1437, 1514, 1739, 2028
FspI	TGCGCA	1 cut(s)	107
GlaI	GCGC	3 cut(s)	73, 107, 1214
GluI	GCNGC	6 cut(s)	913, 1044, 1573, 2041, 2310, 2313
GsuI	CTGGAG	2 cut(s)	33, 1673
HaeIII	GGCC	2 cut(s)	455, 1469
HapII	CCGG	4 cut(s)	182, 416, 1148, 1343
HgaI	GACGC	1 cut(s)	614
HhaI	GCGC	3 cut(s)	74, 108, 1215
Hin6I	GCGC	3 cut(s)	72, 106, 1213
HinP1I	GCGC	3 cut(s)	72, 106, 1213
HincII	GTYRAC	2 cut(s)	963, 1540
HindII	GTYRAC	2 cut(s)	963, 1540
HindIII	AAGCTT	4 cut(s)	824, 1101, 1808, 2020
HpaII	CCGG	4 cut(s)	182, 416, 1148, 1343
HphI	GGTGA	7 cut(s)	439, 500, 859, 1235, 1436, 1542, 2484
Hpy166II	GTNNAC	5 cut(s)	316, 963, 1388, 1540, 2566
Hpy8I	GTNNAC	5 cut(s)	316, 963, 1388, 1540, 2566
Hpy99I	CGWCG	2 cut(s)	630, 1598
HpyAV	CCTTC	9 cut(s)	148, 430, 875, 1075, 1252, 1342, 1412, 2000, 2221
HpyCH4III	ACNGT	5 cut(s)	84, 290, 313, 960, 1246
HpyCH4IV	ACGT	2 cut(s)	1596, 2482
HpyF10VI	GCNNNNNNNGC	8 cut(s)	105, 909, 1166, 1175, 1510, 1572, 1892, 2306
HpyF3I	CTNAG	9 cut(s)	59, 250, 652, 842, 984, 1219, 1527, 1557, 2006
HpySE526I	ACGT	2 cut(s)	1596, 2482
HspAI	GCGC	3 cut(s)	72, 106, 1213
KpnI	GGTACC	1 cut(s)	1981
Kzo9I	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
LguI	GCTCTTC	3 cut(s)	25, 192, 1118
LmnI	GCTCC	3 cut(s)	440, 1763, 2230
Lsp1109I	GCAGC	6 cut(s)	924, 1030, 1584, 2052, 2296, 2324
LweI	GCATC	4 cut(s)	751, 1165, 1282, 1790
MaeI	CTAG	7 cut(s)	776, 1239, 1415, 1437, 1514, 1739, 2028
MaeII	ACGT	2 cut(s)	1596, 2482
MaeIII	GTNAC	7 cut(s)	334, 1322, 1424, 1548, 2189, 2362, 2512
MalI	GATC	8 cut(s)	131, 648, 839, 861, 948, 1341, 1455, 2076
MboI	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
MfeI	CAATTG	5 cut(s)	198, 720, 950, 1896, 2373
MflI	RGATCY	4 cut(s)	646, 837, 1339, 1453
MhlI	GDGCHC	5 cut(s)	159, 445, 1113, 1768, 2090
MlyI	GAGTC	5 cut(s)	52, 1282, 1303, 1556, 1798
MmeI	TCCRAC	7 cut(s)	272, 595, 955, 1741, 1847, 1908, 2156
Mph1103I	ATGCAT	3 cut(s)	247, 1180, 1333
MroXI	GAANNNNTTC	1 cut(s)	2127
MslI	CAYNNNNRTG	2 cut(s)	140, 2418
MspA1I	CMGCKG	1 cut(s)	2315
MspI	CCGG	4 cut(s)	182, 416, 1148, 1343
MspR9I	CCNGG	5 cut(s)	12, 416, 1148, 1563, 2184
MunI	CAATTG	5 cut(s)	198, 720, 950, 1896, 2373
Mva1269I	GAATGC	4 cut(s)	245, 401, 895, 2122
MvaI	CCWGG	3 cut(s)	12, 1563, 2184
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	8 cut(s)	105, 909, 1166, 1175, 1510, 1572, 1892, 2306
NciI	CCSGG	2 cut(s)	416, 1148
NdeII	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
NlaIV	GGNNCC	5 cut(s)	260, 356, 1765, 1979, 2564
NmuCI	GTSAC	4 cut(s)	1424, 1548, 2189, 2362
NsbI	TGCGCA	1 cut(s)	107
NsiI	ATGCAT	3 cut(s)	247, 1180, 1333
NspI	RCATGY	2 cut(s)	99, 1374
PagI	TCATGA	3 cut(s)	46, 2430, 2579
PceI	AGGCCT	1 cut(s)	455
PciSI	GCTCTTC	3 cut(s)	25, 192, 1118
PctI	GAATGC	4 cut(s)	245, 401, 895, 2122
PdmI	GAANNNNTTC	1 cut(s)	2127
PfeI	GAWTC	9 cut(s)	206, 402, 530, 854, 1606, 1717, 1754, 1830, 2243
PflMI	CCANNNNNTGG	1 cut(s)	2296
PfoI	TCCNGGA	3 cut(s)	10, 1146, 2182
PkrI	GCNGC	6 cut(s)	914, 1045, 1574, 2042, 2311, 2314
PleI	GAGTC	5 cut(s)	51, 1281, 1303, 1555, 1797
PpsI	GAGTC	5 cut(s)	51, 1281, 1303, 1555, 1797
PpuMI	RGGWCCY	1 cut(s)	1063
PsiI	TTATAA	2 cut(s)	738, 1602
Psp124BI	GAGCTC	3 cut(s)	159, 445, 1113
Psp5II	RGGWCCY	1 cut(s)	1063
Psp6I	CCWGG	3 cut(s)	10, 1561, 2182
PspEI	GGTNACC	1 cut(s)	1424
PspGI	CCWGG	3 cut(s)	10, 1561, 2182
PspN4I	GGNNCC	5 cut(s)	260, 356, 1765, 1979, 2564
PspPI	GGNCC	5 cut(s)	803, 1063, 1468, 1930, 2563
PspPPI	RGGWCCY	1 cut(s)	1063
PstI	CTGCAG	2 cut(s)	1874, 2314
PstNI	CAGNNNCTG	1 cut(s)	1869
PsuI	RGATCY	4 cut(s)	646, 837, 1339, 1453
PvuII	CAGCTG	1 cut(s)	2315
RsaI	GTAC	7 cut(s)	86, 479, 1521, 1658, 1732, 1942, 1979
RsaNI	GTAC	7 cut(s)	85, 478, 1520, 1657, 1731, 1941, 1978
RseI	CAYNNNNRTG	2 cut(s)	140, 2418
SacI	GAGCTC	3 cut(s)	159, 445, 1113
SapI	GCTCTTC	3 cut(s)	25, 192, 1118
SatI	GCNGC	6 cut(s)	913, 1044, 1573, 2041, 2310, 2313
Sau3AI	GATC	8 cut(s)	129, 646, 837, 859, 946, 1339, 1453, 2074
Sau96I	GGNCC	5 cut(s)	803, 1063, 1468, 1930, 2563
ScaI	AGTACT	1 cut(s)	1658
SchI	GAGTC	5 cut(s)	52, 1282, 1303, 1556, 1798
ScrFI	CCNGG	5 cut(s)	12, 416, 1148, 1563, 2184
SduI	GDGCHC	5 cut(s)	159, 445, 1113, 1768, 2090
SfaNI	GCATC	4 cut(s)	751, 1165, 1282, 1790
SfcI	CTRYAG	3 cut(s)	1245, 1870, 2310
SinI	GGWCC	4 cut(s)	803, 1063, 1930, 2563
SmiMI	CAYNNNNRTG	2 cut(s)	140, 2418
SmlI	CTYRAG	2 cut(s)	1191, 1391
SmoI	CTYRAG	2 cut(s)	1191, 1391
SpeI	ACTAGT	1 cut(s)	2027
SseBI	AGGCCT	1 cut(s)	455
SsiI	CCGC	4 cut(s)	74, 2120, 2540, 2545
SspI	AATATT	1 cut(s)	1480
SspMI	CTAG	7 cut(s)	776, 1239, 1415, 1437, 1514, 1739, 2028
SstI	GAGCTC	3 cut(s)	159, 445, 1113
StuI	AGGCCT	1 cut(s)	455
StyD4I	CCNGG	5 cut(s)	10, 414, 1146, 1561, 2182
StyI	CCWWGG	3 cut(s)	726, 2290, 2533
TaaI	ACNGT	5 cut(s)	84, 290, 313, 960, 1246
TaiI	ACGT	2 cut(s)	1599, 2485
TaqI	TCGA	5 cut(s)	264, 759, 833, 2246, 2269
TatI	WGTACW	3 cut(s)	477, 1656, 1730
TfiI	GAWTC	9 cut(s)	206, 402, 530, 854, 1606, 1717, 1754, 1830, 2243
TseFI	GTSAC	4 cut(s)	1424, 1548, 2189, 2362
TseI	GCWGC	6 cut(s)	912, 1043, 1572, 2040, 2309, 2312
Tsp45I	GTSAC	4 cut(s)	1424, 1548, 2189, 2362
TspGWI	ACGGA	2 cut(s)	330, 1191
Van91I	CCANNNNNTGG	1 cut(s)	2296
VpaK11BI	GGWCC	4 cut(s)	803, 1063, 1930, 2563
XagI	CCTNNNNNAGG	1 cut(s)	1514
XbaI	TCTAGA	1 cut(s)	775
XceI	RCATGY	2 cut(s)	99, 1374
XmiI	GTMKAC	1 cut(s)	315
XmnI	GAANNNNTTC	1 cut(s)	2127
XspI	CTAG	7 cut(s)	776, 1239, 1415, 1437, 1514, 1739, 2028
ZrmI	AGTACT	1 cut(s)	1658
Zsp2I	ATGCAT	3 cut(s)	247, 1180, 1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.