Rh1AG095600

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0008889
Physical Location & Seq
Forward (+)
16688516 .. 16692810
4295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG095600.1

Sequence Viewer

Length: 3198 bp
ATGGCCACTCAATTTGAATCCCCTTCCTTTTCTTCTTCAAGCCGTATCCAGTCTTGGAAATATGATGTCTATCTGAATTTCAGAGGTGAGGATACACGCTACAGTTTTACCGATCATTTGTACAAAGCTTTGATTCAGAAGGGATTGAAAACCTTCCGAGATGACCGGAACCTTCGGCAGGGAGCAAGTATATCAGAAATGGTTAACGAAGCAATTGAAGGATCGAGGGCTTTTATGATCATATTCTCTGAAAGCTATGCATCCTCAAAGTGGTGCTTGGACGAACTTGTTAAAATCATCCAATGTCAAAAATCAGATAATCGATTGGTTTTCCCCGTTTTTTACAAAGTGGATCCCGTAGTTGTAAGGAGACAGACAGGTTCTTTTGCTGATGCATTTGCTGAACATGAAGATAGATCCTGGGATTCCAAAGACAGGGTTAGCCGATGGAGAGAAGCTCTTGTGCGAGCAGCGAACTTCTCCGGATGGATTTACTCTCACGGGGGGTCTGAATCAGAATTCATTGGTGAAATTGTTAAGAATGTTTCAAATAATCTATTACATCATATCCATGCATATGTGGCAAAGTACCCTGTCGGAATAGAATCTCGTATCGAAGATGTGGCTAAGCTTGTAGGTTTTGGAGAGTATAATGTCCGTATGGTAGGGATATGGGGGACTGCCGGAATAGGTAAAACAACAGTTGCCAAAGCTGCTTATAATTCCTTTGTCCATATGTTCGAAAGTAGCTGTTTTCTGGACAATGTGAGAGAAAGATCACTGTCATATGAAGGCCTACTAGGACTGCAAAATATACTTATTTCCCAAGTTCTAAGAGGTGAAGAACTGAAGTTGACCAATGTCGATCAAGGAATCAGTGTGCTAAAGAAAAGGTTGAGCAAGAAAAAAATTCTATTAGTTCTTGATGACGTGAGTCAATCAAACCAGTTAGAGAAATTAGCTGGTGGATCTAATTGGTTTGGTTTGGGCAGCAGAGTAATCATTACAACACAAGACAAGCATCTGCTACTTAGCAATCAAGTCAAACAAATATACAAGGTTAGGGAATTAGACCGTGATGAATCTTTTCATCTCTTTTGTTGTCATGCGTTCCACAGAACAATACCTATGACTGATTATGAAGAACTTGCAAGTTGGGTCGTACAGTACGCTCAAGGTCATCCATTAGCTTTGGTAGTTTTAGGTTCAGGGCTCTGTGGTAGAACTATAGAGGAATGGCAAGAGGCAAAAGACAGCAATTGGAGATTTTATAACAGAGATCTTCTCAGAACTCTCACAAGTAGTTACGATGCGTTGGATGATTCAGTGAAAGAGGTCTTCCTTGACCTTGCATGTTTCTTTACAGGTGAAAATAAGAACTATGTGATACAAATACTAGAAGGTGGTGACCTTAACCCTAAGAATAGTATTAGTGTGCTCCAAGAAAAGGCCTTAATAAATATAAGTGAAGAAAATCACATTTTGATGCACAACTTGCTAGAGCAAATGGGTAAAGAAATAATTTACAATGAGTCGCCAAATGATCCCTCTAAACGCAGCAGATTGTGGTTTGCCGATGACGTTTACAATGTTCTTACTGAAGGAATGGGAACTGATAAAATTAAAGGCATTATGGTGAAGTTACCCGAACCAGCTGAGATAGTATTGAGTCCTGCAAGCTTCTCAGGGATGAAGAATCTTAAATACTTCATTAATTGTAATGCATCTTTTTCTGGTGACGTCATTGATTATCTCCCCAACGAGTTACGGCTTATTGATTGGCCTGGATTCCCATTTGAATCATTTCCAGCCAATTTTATTCCAAAGAAGCTTGTTAGACTCAATATGCCACGCAGCAGCCGCTTGTCACGACTGGGAGAGAGATTTAAGCCCTCCAAAAGCCTGAAATATATAAATTTGGAAAGCTGCCCTTTGCTGACCGAAATCCCTGAGTACTTCTCTGGACTCTCAAACTTAAAGGACTTAAATCTGAACGAATGTTCAAGTTTAGTTCAGGTTGGTGCTTCTGTTGGTGTCCTTGATCAGCTGCTTGGCTTGAGTCTTTCGGGTTGCAATAATCTTACTTCATTTCCAAGAGAAATCGCCTTGAAATCTGTGGAATATATAAATCTTAGAGGTTGCAGAATGCTCCAGACTTTCCCTGAAATTGTGGCAAAGATGGTTTTCTTGACAAGCTTGGATCTATCTGGCACTGCCATAAAGGAATTGCCTTCATCAATTGCACATCTCATTAGCCTCGAAGAGTTGACAATTAGAGAATGTGAATACCTTACAGACCTGCCATGCAGCATATTTGAGTTGCAGCATCTATGGTGTCTTGATCTCCAAGGCTGCTCAAAACTTGTTACAATCCCAAAGTGGAGTGCAGAGTCTATTACAACAAAATCACCTGACTTGTGTTATCTTAACTTGCGCGGGTGCAACAGACTTCAAGAAATTCCTGAACTTCCACCGAAAGTCAATCTGGTAAACGCGGCTGATTGCACATTACTTGAACGATTTGCAAAATTGTCAAACATCTTGGAACGTAAGGAGTCACAAATGATGAAATGCATCACATTGTTTAATTGTCAGAAACTGTGTGCAAGTCTTGCTCATGGCGTGACAGGGATTGAACATATCTTACTGGATGAAATATGCTCTCTCTTTCTCTCATGTATGCAATCTGAATTCCATGTTGTCTTTCCCGGACGTGAAGTTCCAAAGTGGTTTGACCACCGTGAAAATTTGAAGGAGCTAGGAAATACATCTGAATTTTCTTTTGTAATCCCTCAAAATTTCAAACAGGAAAACAAAGGATTGGCTATCTGTGCTGCAGCAACAACTGTTGAAGAAATTAACTCGGAAGAAGAATTCCCGCAAAATAATTGCTCTTTCACAGTCAGAATTGACATTGATGCAGAGAGCAGTGTTGCACGGTCTTTTAGTTTTGAAGCAAAAGACATGCAGTCAGCTCATGTGTGGCTGCTCTATATTCCATTCATCAAGTTTGCCTATTGTAAATCCCCGCCTTTTGCTTGTCGAGTTAGATTGGGTCATACTAGCCAAGGTTCGGTGCGCTGTAAAAGCTACGGTGTCCACCTGGTAATTCCAGAAGCTGAATCTGAAGACGAAGATGATTACAAGATGGATGAGCACCCTTCTATTGTAGATGATGAAAGCGGTGAAGACTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1065

Amino Acids

120.68

Weight (kDa)

5.56

Isoelectric Point (pI)

47.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 20 - 188 2.5e-51 TIR domain
TIR_2 PF13676 23 - 125 1e-14 TIR domain
NB-ARC PF00931 216 - 374 1.5e-17 NB-ARC domain
WHD_ROQ1 PF23282 444 - 511 1.3e-14 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 703 - 789 7.2e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 722 - 788 4.4e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 720, 1272, 3196
AatII GACGTC 1 cut(s) 1743
Acc36I ACCTGC 1 cut(s) 2307
AccII CGCG 2 cut(s) 2436, 2495
AccIII TCCGGA 1 cut(s) 482
AciI CCGC 6 cut(s) 1861, 2436, 2495, 2879, 3029, 3183
AclWI GGATC 7 cut(s) 229, 347, 360, 411, 976, 1538, 2208
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 3 cut(s) 869, 1620, 3147
AcyI GRCGYC 1 cut(s) 1740
AfaI GTAC 5 cut(s) 122, 590, 1164, 1169, 1955
AfiI CCNNNNNNNGG 5 cut(s) 178, 270, 435, 1447, 3073
AhdI GACNNNNNGTC 1 cut(s) 2968
AjiI CACGTC 2 cut(s) 931, 2714
AjnI CCWGG 3 cut(s) 419, 1783, 3102
AloI GAACNNNNNNTCC 2 cut(s) 2703, 2735
Alw21I GWGCWC 2 cut(s) 1440, 3159
Alw26I GTCTC 1 cut(s) 364
AlwI GGATC 7 cut(s) 229, 347, 360, 411, 976, 1538, 2208
AlwNI CAGNNNCTG 2 cut(s) 2599, 3119
Aor13HI TCCGGA 1 cut(s) 482
AoxI GGCC 4 cut(s) 3, 793, 1449, 1781
AseI ATTAAT 1 cut(s) 1713
Asp700I GAANNNNTTC 3 cut(s) 152, 1086, 1803
AspLEI GCGC 2 cut(s) 2436, 3081
AsuC2I CCSGG 1 cut(s) 2709
AsuHPI GGTGA 9 cut(s) 98, 539, 851, 1379, 1418, 1648, 1748, 2400, 3197
AsuII TTCGAA 1 cut(s) 741
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 352
BanII GRGCYC 1 cut(s) 1215
BbsI GAAGAC 2 cut(s) 1330, 3135
Bbv12I GWGCWC 2 cut(s) 1440, 3159
BccI CCATC 4 cut(s) 441, 480, 2173, 3142
BceAI ACGGC 2 cut(s) 27, 1784
BciT130I CCWGG 3 cut(s) 421, 1785, 3104
BciVI GTATCC 2 cut(s) 56, 85
BclI TGATCA 2 cut(s) 237, 2041
BcnI CCSGG 1 cut(s) 2709
BcoDI GTCTC 1 cut(s) 364
BfaI CTAG 5 cut(s) 800, 1397, 1499, 2759, 3063
BfmI CTRYAG 3 cut(s) 100, 1227, 2835
BfuAI ACCTGC 1 cut(s) 2307
BfuI GTATCC 2 cut(s) 56, 85
BglII AGATCT 1 cut(s) 1279
BlpI GCTNAGC 1 cut(s) 627
BmcAI AGTACT 1 cut(s) 1955
Bme1390I CCNGG 4 cut(s) 421, 1785, 2709, 3104
BmeRI GACNNNNNGTC 1 cut(s) 2968
BmgBI CACGTC 2 cut(s) 931, 2714
BmiI GGNNCC 2 cut(s) 170, 354
BmrFI CCNGG 4 cut(s) 421, 1785, 2709, 3104
BmrI ACTGGG 1 cut(s) 1883
BmsI GCATC 9 cut(s) 269, 382, 1030, 1300, 1476, 1733, 2335, 2583, 2908
BmuI ACTGGG 1 cut(s) 1883
BoxI GACNNNNGTC 2 cut(s) 860, 933
BpiI GAAGAC 2 cut(s) 1330, 3135
BplI GAGNNNNNCTC 6 cut(s) 442, 474, 1269, 1301, 1943, 1975
BpmI CTGGAG 1 cut(s) 2135
Bpu1102I GCTNAGC 1 cut(s) 627
Bpu14I TTCGAA 1 cut(s) 741
BpuEI CTTGAG 2 cut(s) 1158, 2077
BpuMI CCSGG 1 cut(s) 2709
Bsa29I ATCGAT 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 69
BsaHI GRCGYC 1 cut(s) 1740
BsaJI CCNNGG 3 cut(s) 420, 2347, 3067
BsaWI WCCGGW 2 cut(s) 165, 482
Bsc4I CCNNNNNNNGG 5 cut(s) 178, 270, 435, 1447, 3073
Bse1I ACTGG 4 cut(s) 49, 946, 1878, 2652
Bse8I GATNNNNATC 1 cut(s) 69
BseAI TCCGGA 1 cut(s) 482
BseBI CCWGG 3 cut(s) 421, 1785, 3104
BseCI ATCGAT 1 cut(s) 322
BseDI CCNNGG 3 cut(s) 420, 2347, 3067
BseGI GGATG 8 cut(s) 260, 297, 491, 1180, 1324, 1695, 2656, 3157
BseJI GATNNNNATC 1 cut(s) 69
BseLI CCNNNNNNNGG 5 cut(s) 178, 270, 435, 1447, 3073
BseMII CTCAG 4 cut(s) 1300, 1647, 1698, 1941
BseNI ACTGG 4 cut(s) 49, 946, 1878, 2652
BsgI GTGCAG 1 cut(s) 2406
Bsh1236I CGCG 2 cut(s) 2436, 2495
BshFI GGCC 4 cut(s) 5, 795, 1451, 1783
BshVI ATCGAT 1 cut(s) 322
BsiHKAI GWGCWC 2 cut(s) 1440, 3159
BsiSI CCGG 4 cut(s) 166, 483, 684, 2709
BslFI GGGAC 1 cut(s) 691
BslI CCNNNNNNNGG 5 cut(s) 178, 270, 435, 1447, 3073
BsmAI GTCTC 1 cut(s) 364
BsmFI GGGAC 1 cut(s) 691
BsmI GAATGC 1 cut(s) 2151
BsnI GGCC 4 cut(s) 5, 795, 1451, 1783
Bsp119I TTCGAA 1 cut(s) 741
Bsp1286I GDGCHC 3 cut(s) 1215, 1440, 3159
Bsp13I TCCGGA 1 cut(s) 482
Bsp1407I TGTACA 1 cut(s) 120
Bsp1720I GCTNAGC 1 cut(s) 627
BspACI CCGC 6 cut(s) 1861, 2436, 2495, 2879, 3029, 3183
BspANI GGCC 4 cut(s) 5, 795, 1451, 1783
BspCNI CTCAG 4 cut(s) 1299, 1648, 1697, 1942
BspDI ATCGAT 1 cut(s) 322
BspEI TCCGGA 1 cut(s) 482
BspFNI CGCG 2 cut(s) 2436, 2495
BspLI GGNNCC 2 cut(s) 170, 354
BspMAI CTGCAG 1 cut(s) 2839
BspMI ACCTGC 1 cut(s) 2307
BspPI GGATC 7 cut(s) 229, 347, 360, 411, 976, 1538, 2208
BspT104I TTCGAA 1 cut(s) 741
BsrGI TGTACA 1 cut(s) 120
BsrI ACTGG 4 cut(s) 49, 946, 1878, 2652
BssECI CCNNGG 3 cut(s) 420, 2347, 3067
BssNI GRCGYC 1 cut(s) 1740
BssT1I CCWWGG 2 cut(s) 2347, 3067
Bst2UI CCWGG 3 cut(s) 421, 1785, 3104
Bst6I CTCTTC 1 cut(s) 2256
BstACI GRCGYC 1 cut(s) 1740
BstAPI GCANNNNNTGC 2 cut(s) 1495, 2612
BstAUI TGTACA 1 cut(s) 120
BstBI TTCGAA 1 cut(s) 741
BstC8I GCNNGC 2 cut(s) 468, 1678
BstDEI CTNAG 9 cut(s) 627, 833, 1031, 1286, 1419, 1656, 1684, 1950, 2132
BstEII GGTNACC 1 cut(s) 1406
BstENI CCTNNNNNAGG 1 cut(s) 176
BstF5I GGATG 8 cut(s) 260, 297, 491, 1180, 1324, 1695, 2656, 3157
BstFNI CGCG 2 cut(s) 2436, 2495
BstHHI GCGC 2 cut(s) 2436, 3081
BstMAI GTCTC 1 cut(s) 364
BstMWI GCNNNNNNNGC 7 cut(s) 581, 713, 1495, 1860, 2612, 2831, 3087
BstNI CCWGG 3 cut(s) 421, 1785, 3104
BstNSI RCATGY 2 cut(s) 1356, 2968
BstPAI GACNNNNGTC 2 cut(s) 860, 933
BstPI GGTNACC 1 cut(s) 1406
BstSCI CCNGG 4 cut(s) 419, 1783, 2707, 3102
BstSFI CTRYAG 3 cut(s) 100, 1227, 2835
BstUI CGCG 2 cut(s) 2436, 2495
BstV2I GAAGAC 2 cut(s) 1330, 3135
BstX2I RGATCY 5 cut(s) 352, 416, 968, 1279, 2200
BstYI RGATCY 5 cut(s) 352, 416, 968, 1279, 2200
Bsu15I ATCGAT 1 cut(s) 322
BsuI GTATCC 2 cut(s) 56, 85
BsuRI GGCC 4 cut(s) 5, 795, 1451, 1783
BsuTUI ATCGAT 1 cut(s) 322
BtrI CACGTC 2 cut(s) 931, 2714
BtsCI GGATG 8 cut(s) 260, 297, 491, 1180, 1324, 1695, 2656, 3157
BtsI GCAGTG 2 cut(s) 2211, 2935
BtsIMutI CAGTG 5 cut(s) 779, 883, 1332, 2211, 2935
BveI ACCTGC 1 cut(s) 2307
Cac8I GCNNGC 2 cut(s) 468, 1678
CaiI CAGNNNCTG 2 cut(s) 2599, 3119
CfoI GCGC 2 cut(s) 2436, 3081
ClaI ATCGAT 1 cut(s) 322
CsiI ACCWGGT 1 cut(s) 3102
Csp6I GTAC 5 cut(s) 121, 589, 1163, 1168, 1954
CspCI CAANNNNNGTGG 1 cut(s) 30
CviQI GTAC 5 cut(s) 121, 589, 1163, 1168, 1954
DdeI CTNAG 9 cut(s) 627, 833, 1031, 1286, 1419, 1656, 1684, 1950, 2132
DriI GACNNNNNGTC 1 cut(s) 2968
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 2256
Eam1105I GACNNNNNGTC 1 cut(s) 2968
EarI CTCTTC 1 cut(s) 2256
Eco130I CCWWGG 2 cut(s) 2347, 3067
Eco147I AGGCCT 2 cut(s) 795, 1451
Eco24I GRGCYC 1 cut(s) 1215
Eco57I CTGAAG 3 cut(s) 869, 1620, 3147
Eco91I GGTNACC 1 cut(s) 1406
EcoNI CCTNNNNNAGG 1 cut(s) 176
EcoO65I GGTNACC 1 cut(s) 1406
EcoRI GAATTC 3 cut(s) 518, 2690, 2873
EcoRII CCWGG 3 cut(s) 419, 1783, 3102
EcoT14I CCWWGG 2 cut(s) 2347, 3067
EcoT22I ATGCAT 5 cut(s) 262, 397, 577, 1726, 2576
EcoT38I GRGCYC 1 cut(s) 1215
ErhI CCWWGG 2 cut(s) 2347, 3067
FalI AAGNNNNNCTT 4 cut(s) 260, 292, 1915, 1947
FaqI GGGAC 1 cut(s) 691
FauI CCCGC 3 cut(s) 2429, 2886, 3036
FauNDI CATATG 3 cut(s) 577, 735, 787
FbaI TGATCA 2 cut(s) 237, 2041
FokI GGATG 8 cut(s) 247, 284, 498, 1167, 1331, 1702, 2663, 3164
FriOI GRGCYC 1 cut(s) 1215
FspBI CTAG 5 cut(s) 800, 1397, 1499, 2759, 3063
GlaI GCGC 2 cut(s) 2435, 3080
GsuI CTGGAG 1 cut(s) 2135
HaeIII GGCC 4 cut(s) 5, 795, 1451, 1783
HapII CCGG 4 cut(s) 166, 483, 684, 2709
HhaI GCGC 2 cut(s) 2436, 3081
Hin1I GRCGYC 1 cut(s) 1740
Hin6I GCGC 2 cut(s) 2434, 3079
HinP1I GCGC 2 cut(s) 2434, 3079
HincII GTYRAC 3 cut(s) 205, 855, 2268
HindII GTYRAC 3 cut(s) 205, 855, 2268
HindIII AAGCTT 5 cut(s) 126, 629, 1678, 1829, 2194
HpaI GTTAAC 1 cut(s) 205
HpaII CCGG 4 cut(s) 166, 483, 684, 2709
HphI GGTGA 9 cut(s) 98, 539, 851, 1379, 1418, 1648, 1748, 2400, 3197
Hpy166II GTNNAC 6 cut(s) 205, 855, 1585, 2268, 2491, 3100
Hpy8I GTNNAC 6 cut(s) 205, 855, 1585, 2268, 2491, 3100
HpyCH4IV ACGT 5 cut(s) 930, 1581, 1740, 2548, 2713
HpyF10VI GCNNNNNNNGC 7 cut(s) 581, 713, 1495, 1860, 2612, 2831, 3087
HpyF3I CTNAG 9 cut(s) 627, 833, 1031, 1286, 1419, 1656, 1684, 1950, 2132
HpySE526I ACGT 5 cut(s) 930, 1581, 1740, 2548, 2713
Hsp92I GRCGYC 1 cut(s) 1740
HspAI GCGC 2 cut(s) 2434, 3079
Kpn2I TCCGGA 1 cut(s) 482
Ksp22I TGATCA 2 cut(s) 237, 2041
KspAI GTTAAC 1 cut(s) 205
LmnI GCTCC 4 cut(s) 182, 1443, 2154, 2755
LweI GCATC 9 cut(s) 269, 382, 1030, 1300, 1476, 1733, 2335, 2583, 2908
MabI ACCWGGT 1 cut(s) 3102
MaeI CTAG 5 cut(s) 800, 1397, 1499, 2759, 3063
MaeII ACGT 5 cut(s) 930, 1581, 1740, 2548, 2713
MaeIII GTNAC 9 cut(s) 1304, 1406, 1641, 1736, 1764, 1866, 2365, 2556, 2623
MfeI CAATTG 3 cut(s) 213, 1258, 2238
MflI RGATCY 5 cut(s) 352, 416, 968, 1279, 2200
MhlI GDGCHC 3 cut(s) 1215, 1440, 3159
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 8 cut(s) 943, 1541, 1678, 1833, 1959, 2068, 2399, 2564
MmeI TCCRAC 2 cut(s) 577, 1296
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 5 cut(s) 262, 397, 577, 1726, 2576
MroI TCCGGA 1 cut(s) 482
MroXI GAANNNNTTC 3 cut(s) 152, 1086, 1803
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 4 cut(s) 570, 576, 1484, 1634
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 1655, 2047
MspI CCGG 4 cut(s) 166, 483, 684, 2709
MspR9I CCNGG 4 cut(s) 421, 1785, 2709, 3104
MunI CAATTG 3 cut(s) 213, 1258, 2238
Mva1269I GAATGC 1 cut(s) 2151
MvaI CCWGG 3 cut(s) 421, 1785, 3104
MvnI CGCG 2 cut(s) 2436, 2495
MwoI GCNNNNNNNGC 7 cut(s) 581, 713, 1495, 1860, 2612, 2831, 3087
NciI CCSGG 1 cut(s) 2709
NdeI CATATG 3 cut(s) 577, 735, 787
NlaIV GGNNCC 2 cut(s) 170, 354
NmuCI GTSAC 5 cut(s) 1406, 1736, 1866, 2556, 2623
NsiI ATGCAT 5 cut(s) 262, 397, 577, 1726, 2576
NspI RCATGY 2 cut(s) 1356, 2968
NspV TTCGAA 1 cut(s) 741
PceI AGGCCT 2 cut(s) 795, 1451
PctI GAATGC 1 cut(s) 2151
PdmI GAANNNNTTC 3 cut(s) 152, 1086, 1803
PfoI TCCNGGA 1 cut(s) 2707
PleI GAGTC 8 cut(s) 942, 1540, 1677, 1833, 1959, 2067, 2398, 2563
PpsI GAGTC 8 cut(s) 942, 1540, 1677, 1833, 1959, 2067, 2398, 2563
PshAI GACNNNNGTC 2 cut(s) 860, 933
PshBI ATTAAT 1 cut(s) 1713
PsiI TTATAA 3 cut(s) 720, 1272, 3196
Psp6I CCWGG 3 cut(s) 419, 1783, 3102
PspEI GGTNACC 1 cut(s) 1406
PspGI CCWGG 3 cut(s) 419, 1783, 3102
PspN4I GGNNCC 2 cut(s) 170, 354
PsrI GAACNNNNNNTAC 2 cut(s) 2628, 2660
PstI CTGCAG 1 cut(s) 2839
PstNI CAGNNNCTG 2 cut(s) 2599, 3119
PsuI RGATCY 5 cut(s) 352, 416, 968, 1279, 2200
PvuII CAGCTG 2 cut(s) 1655, 2047
RsaI GTAC 5 cut(s) 122, 590, 1164, 1169, 1955
RsaNI GTAC 5 cut(s) 121, 589, 1163, 1168, 1954
RseI CAYNNNNRTG 4 cut(s) 570, 576, 1484, 1634
ScaI AGTACT 1 cut(s) 1955
SchI GAGTC 8 cut(s) 943, 1541, 1678, 1833, 1959, 2068, 2399, 2564
ScrFI CCNGG 4 cut(s) 421, 1785, 2709, 3104
SduI GDGCHC 3 cut(s) 1215, 1440, 3159
SexAI ACCWGGT 1 cut(s) 3102
SfaNI GCATC 9 cut(s) 269, 382, 1030, 1300, 1476, 1733, 2335, 2583, 2908
SfcI CTRYAG 3 cut(s) 100, 1227, 2835
SfuI TTCGAA 1 cut(s) 741
SmiMI CAYNNNNRTG 4 cut(s) 570, 576, 1484, 1634
SmlI CTYRAG 2 cut(s) 1173, 2056
SmoI CTYRAG 2 cut(s) 1173, 2056
SseBI AGGCCT 2 cut(s) 795, 1451
SsiI CCGC 6 cut(s) 1861, 2436, 2495, 2879, 3029, 3183
SspMI CTAG 5 cut(s) 800, 1397, 1499, 2759, 3063
StuI AGGCCT 2 cut(s) 795, 1451
StyD4I CCNGG 4 cut(s) 419, 1783, 2707, 3102
StyI CCWWGG 2 cut(s) 2347, 3067
TaiI ACGT 5 cut(s) 933, 1584, 1743, 2551, 2716
TaqI TCGA 7 cut(s) 224, 322, 615, 741, 864, 2259, 3043
TaqII GACCGA 1 cut(s) 1955
TatI WGTACW 2 cut(s) 120, 1953
TauI GCSGC 2 cut(s) 1863, 2498
TscAI CASTG 5 cut(s) 786, 883, 1332, 2218, 2935
TseFI GTSAC 5 cut(s) 1406, 1736, 1866, 2556, 2623
Tsp45I GTSAC 5 cut(s) 1406, 1736, 1866, 2556, 2623
TspGWI ACGGA 1 cut(s) 647
TspRI CASTG 5 cut(s) 786, 883, 1332, 2218, 2935
VspI ATTAAT 1 cut(s) 1713
XagI CCTNNNNNAGG 1 cut(s) 176
XceI RCATGY 2 cut(s) 1356, 2968
XmnI GAANNNNTTC 3 cut(s) 152, 1086, 1803
XspI CTAG 5 cut(s) 800, 1397, 1499, 2759, 3063
ZraI GACGTC 1 cut(s) 1741
ZrmI AGTACT 1 cut(s) 1955
Zsp2I ATGCAT 5 cut(s) 262, 397, 577, 1726, 2576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.