Rh6DG136200

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
19486982 .. 19491118
4137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG136200.1

Sequence Viewer

Length: 2952 bp
ATGGTTAGACCCGTTTTCTACAAGGTGGATCCCTCAAATGTACGGAACCAAAGTGGTAGTTTTGGTGAAGCGCTTGCTCAACATGAGAGGAGATTCAACAATAAAATGGAGAGGGTCTTGTCGTGGATAAGGAATTTGCTGAACTGGTCGTTGAGTTATGATGACAGCGAATTCAAGCATAACATGAAGAAGCTGAATAAATGGACCAAAGCTCTCAAGGAAGCGGCGGACTTGTCTGGATGGACTTACTTGAATGGGTCTGAATCAAAATTTATCGATAACATCGTTGCAGAAATTTCAGAACAAATTTTACGTCATAGCAATTTTAATGTGGCGGATCATCCAGTTGGAATACATTCTCGAGTACGAGATATGCACAATGTTTTAGGTCTTGGGGTGAAAGATGTTCGAATGGTAGGAATATGGGGTATGGGAGGAATAGGCAAGACAACAATTGCTAGGGCTGTTTATAATTCCCTTGCCTATAAGTTCGATGGCAGTTGTTTTCTGGAAAATGTTGGCAACAAATCAATGCAGCATGGAGGCCTAGTCAGACTACAAAGTTACCTTCTGTACAAGATTCTAGGGGGGCAAAAACTAGAGCTGACAGATGTGGGTGAAGGGATGAGTGCGATACAGGACAGGCTACTTAAAAAAAGGGTTCTCATAGTATTGGATGATGTGAACCAATTAGACCAGTTAAAAAAATTATGTGGAAGTTTTGAATGGTTTGGTATTGGCAGCAGAATCATCATAACAACAAGAAATAAACATTTGCTAACTGCTCATCAAGTCAAACGGATACACACGATCAAGGAGTTGAACCATCAGGAAGCTTTGGAGCTCTTCATTGCAAATGCCTTCCCGATAGCAAGGCTTCCAAGACTTCCAGTTGATTATTCACAACTTGCAAGTGATGCAGTACATTATGCTCAAGGTCTCCCATCAGCTCTGATAGCTTTAGGTTCAGTTTTGTGTGGCAGACCTATAATGGAATGGCAAGAGGAATTAAACACTCCATTTTACTCTCTTCAATCAGGTCATTTTGAAACTCTCCGAATAAGTTACAATAACTTGGAAGATTCGGTAAAGAATGTTTTCCTTGACATTGCATTTTTCTTCAACGGTCAAGATGAGAACCATGTGTTACAGATCCTAGAAGGTGGTGACAAGCCTAACAAAAGCATTAGTGAGCTCAAAGAAAAGGCACTCATAAGGATTAACGAAAAAAATCATATCTTGATGCACAATATACTAGAAGTAATGGCTAAAGAGATAGTTCACATTGAGTCACCAAAGAACCCCGCTAGACGTAGCCGATTGTGGTTTTCTGATGATGTTTACGATGTTCTCACAAAATGCACGGGAACAGACAATATCAAAGGCGTCATGGTAATGTTTGGCGGACCACGTGAGATAGCACTGCAAAATAACAGCTTCGATGGGATGACAAATCTTCAGTTCTTTATAAACACCGATGCACACTTTTCTGGGGACATTGAATATCTCCCCGACAAGTTAAGACTTATTGATTGGCCTGAATTTCCCTTTGGATCATTTCCAATCAATTTTAATCCAACTAAGCTTGTTAAGCTTAGTATACCTCGTAGCCTCATCTCCCAACTGGGAGAGACATTCAAGAGTTGCAGTAACCTGAAATATATAAACTTGGAAAGCTGCCACTTCCTTACTAGAATTCCCGACTTGTCAGGATTCCCAAATTTAAAGGAGCTGAATCTTAACAATTGTACAAGCTTAGTTGTGGTTGATCAGTCTGTTGGACTTCTTGATAAGCTTGTTATTTTGAGTCTTTCTGGATGTGACAGACTCACTATGTTTCCAAGAAGAATCGCCTTGATTTCAGTAAAATATATCAATCTGGGGGGTTGCAGATTGCTCGAGACATTCTGCGACATTCTGGAAAATGTGGTATCCTTGACAAGGCTGGATCTATCCGGCACGGCCATTGAAGAATTGCCTGAAACAGTTATATATCTCGTCAGCCTGAAACATTTAATTCTAAGACAATGTGATAAGCTTATCCATCTGCCACATAGCATTTATGATCTGCATAGTTTATCACGTCTTGATCTGCAGAACTGCTCAAAGCTTGTTACTCTTCCAAGGTGGAATGATGAGCAGTCAGTTTCGACTAACTTGAGGTTTCTTGACCTGCGTGGTTGCACAGAGCTTCCAGAAATTCCCGAACTTCCACCGAGCGTGGAATGGATAAATGCCGATGGCTGTGAGTCATTGGTCCGAGTTGCAAAACTTTCAAACATCTTGGAACGTAGAGCTTCGCAAATGATTGAATCAATTTCATTGTATAATTGTCAGAGATTGTGTGACAATCTACCTCATTGCGGGGCAGGTAATAAGAGTAGTCTCTTCTCTCTCATTCACTTGGCTAAGCAGTCTGAATTCGAGATTGTATTTCCAGCAAGTGAAGTTCCTAGTTGGTTCAGGAATCGCAAGTATTTAATGGAGCTTTTTGATGAACGTGAATTTTCTTTTGAAATTCCTCTAAATTTCAACAAAGGATTGGCTATCTGTGCTTCAGCAACTGCTGTGGGTAATCTTGATCAGTGCTCTTTCACAGCCAGTATTCACATCAATGGAGAAAGCAGATGTACTTATTCATTTTGTTTCGAAGCAAGCAAGATGAAGGACTCTGCTCATGTATGGCTACTCTATATTCCATTTGTTAAGTTTGCGTTTCATGAGCCACCTTATAGCTGCCTAGTTAATTTGAAACATACTAGTAAAGATTCGGTGCGCTGTAGAAGCTATGGGGTTCACCTGGTAATGCTACAGGATGAATATGAAGATTTCGTAGATGACAGCGACTTGGAAGATGAGTACTCAGCTGGTGAAAATGATGAAGACATGATAGATCAAATTGAGGATGGTGAAGACTTTGAAAATATCAGACCCAAAAAGAGAAGACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

983

Amino Acids

111.93

Weight (kDa)

6.09

Isoelectric Point (pI)

50.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 2 - 48 1.2e-06 TIR domain
NB-ARC PF00931 134 - 289 2.6e-20 NB-ARC domain
WHD_ROQ1 PF23282 364 - 428 3.2e-08 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 618 - 727 4.2e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 471, 1469
Acc36I ACCTGC 2 cut(s) 2181, 2360
AccI GTMKAC 1 cut(s) 1600
AciI CCGC 6 cut(s) 224, 227, 335, 1305, 1404, 2364
AclWI GGATC 6 cut(s) 23, 36, 345, 1147, 1561, 1956
AcoI YGGCCR 1 cut(s) 1962
AcuI CTGAAG 2 cut(s) 1442, 2541
AcvI CACGTG 1 cut(s) 1412
AcyI GRCGYC 1 cut(s) 1386
AfaI GTAC 7 cut(s) 42, 366, 575, 924, 1750, 2632, 2861
AfeI AGCGCT 1 cut(s) 72
AfiI CCNNNNNNNGG 2 cut(s) 1941, 2363
AhlI ACTAGT 1 cut(s) 2759
AjiI CACGTC 1 cut(s) 2084
AjnI CCWGG 1 cut(s) 2799
AjuI GAANNNNNNNTTGG 2 cut(s) 1533, 1565
Alw21I GWGCWC 3 cut(s) 846, 1197, 2591
Alw26I GTCTC 4 cut(s) 944, 1625, 1895, 2390
AlwI GGATC 6 cut(s) 23, 36, 345, 1147, 1561, 1956
AlwNI CAGNNNCTG 1 cut(s) 2564
Ama87I CYCGRG 2 cut(s) 360, 1898
Aor51HI AGCGCT 1 cut(s) 72
AoxI GGCC 3 cut(s) 544, 1535, 1962
ApeKI GCWGC 4 cut(s) 535, 741, 1677, 2736
ArsI GACNNNNNNTTYG 2 cut(s) 298, 330
Asp700I GAANNNNTTC 2 cut(s) 355, 1097
AspLEI GCGC 2 cut(s) 73, 2778
AspS9I GGNCC 3 cut(s) 204, 1406, 2257
AsuHPI GGTGA 8 cut(s) 77, 409, 629, 1178, 1284, 2789, 2882, 2921
AsuII TTCGAA 2 cut(s) 409, 2649
AvaI CYCGRG 2 cut(s) 360, 1898
AvaII GGWCC 3 cut(s) 204, 1406, 2257
BamHI GGATCC 1 cut(s) 28
BanII GRGCYC 2 cut(s) 846, 1197
BbrPI CACGTG 1 cut(s) 1412
BbsI GAAGAC 2 cut(s) 2889, 2919
Bbv12I GWGCWC 3 cut(s) 846, 1197, 2591
BbvI GCAGC 4 cut(s) 547, 753, 1664, 2723
BccI CCATC 8 cut(s) 234, 488, 834, 952, 1436, 2052, 2234, 2900
BceAI ACGGC 1 cut(s) 1977
BcgI CGANNNNNNTGC 2 cut(s) 1879, 1913
BciT130I CCWGG 1 cut(s) 2801
BciVI GTATCC 2 cut(s) 795, 1942
BclI TGATCA 2 cut(s) 1768, 2581
BcoDI GTCTC 4 cut(s) 944, 1625, 1895, 2390
BcuI ACTAGT 1 cut(s) 2759
BfmI CTRYAG 3 cut(s) 2093, 2779, 2810
BfoI RGCGCY 1 cut(s) 74
BfuAI ACCTGC 2 cut(s) 2181, 2360
BfuI GTATCC 2 cut(s) 795, 1942
BisI GCNGC 5 cut(s) 225, 536, 742, 1678, 2737
BlpI GCTNAGC 1 cut(s) 2409
BlsI GCNGC 5 cut(s) 226, 537, 743, 1679, 2738
BmcAI AGTACT 1 cut(s) 2861
Bme1390I CCNGG 1 cut(s) 2801
Bme18I GGWCC 3 cut(s) 204, 1406, 2257
BmeT110I CYCGRG 2 cut(s) 360, 1898
BmgBI CACGTC 1 cut(s) 2084
BmgT120I GGNCC 3 cut(s) 204, 1406, 2257
BmiI GGNNCC 2 cut(s) 30, 47
BmrFI CCNGG 1 cut(s) 2801
BmrI ACTGGG 1 cut(s) 1634
BmsI GCATC 3 cut(s) 907, 1233, 1468
BmuI ACTGGG 1 cut(s) 1634
BpiI GAAGAC 2 cut(s) 2889, 2919
Bpu1102I GCTNAGC 1 cut(s) 2409
Bpu14I TTCGAA 2 cut(s) 409, 2649
BpuEI CTTGAG 3 cut(s) 200, 918, 2179
Bsa29I ATCGAT 1 cut(s) 276
BsaAI YACGTR 1 cut(s) 1412
BsaHI GRCGYC 1 cut(s) 1386
BsaI GGTCTC 1 cut(s) 944
BsaJI CCNNGG 1 cut(s) 2123
BsaXI ACNNNNNCTCC 2 cut(s) 534, 564
Bsc4I CCNNNNNNNGG 2 cut(s) 1941, 2363
Bse1I ACTGG 6 cut(s) 149, 344, 697, 890, 1629, 2601
Bse3DI GCAATG 3 cut(s) 849, 1107, 2359
BseBI CCWGG 1 cut(s) 2801
BseCI ATCGAT 1 cut(s) 276
BseDI CCNNGG 1 cut(s) 2123
BseGI GGATG 8 cut(s) 245, 340, 630, 682, 1452, 1823, 2821, 2911
BseLI CCNNNNNNNGG 2 cut(s) 1941, 2363
BseMI GCAATG 3 cut(s) 849, 1107, 2359
BseMII CTCAG 1 cut(s) 2877
BseNI ACTGG 6 cut(s) 149, 344, 697, 890, 1629, 2601
BseRI GAGGAG 1 cut(s) 103
BseXI GCAGC 4 cut(s) 547, 753, 1664, 2723
BshFI GGCC 3 cut(s) 546, 1537, 1964
BshVI ATCGAT 1 cut(s) 276
BsiHKAI GWGCWC 3 cut(s) 846, 1197, 2591
BsiHKCI CYCGRG 2 cut(s) 360, 1898
BsiSI CCGG 1 cut(s) 1956
BslFI GGGAC 1 cut(s) 1508
BslI CCNNNNNNNGG 2 cut(s) 1941, 2363
BsmAI GTCTC 4 cut(s) 944, 1625, 1895, 2390
BsmFI GGGAC 1 cut(s) 1508
BsnI GGCC 3 cut(s) 546, 1537, 1964
Bso31I GGTCTC 1 cut(s) 944
BsoBI CYCGRG 2 cut(s) 360, 1898
Bsp119I TTCGAA 2 cut(s) 409, 2649
Bsp1286I GDGCHC 3 cut(s) 846, 1197, 2591
Bsp1407I TGTACA 2 cut(s) 573, 1748
Bsp1720I GCTNAGC 1 cut(s) 2409
BspACI CCGC 6 cut(s) 224, 227, 335, 1305, 1404, 2364
BspANI GGCC 3 cut(s) 546, 1537, 1964
BspCNI CTCAG 1 cut(s) 2876
BspDI ATCGAT 1 cut(s) 276
BspHI TCATGA 1 cut(s) 2719
BspLI GGNNCC 2 cut(s) 30, 47
BspMAI CTGCAG 1 cut(s) 2097
BspMI ACCTGC 2 cut(s) 2181, 2360
BspPI GGATC 6 cut(s) 23, 36, 345, 1147, 1561, 1956
BspQI GCTCTTC 1 cut(s) 851
BspT104I TTCGAA 2 cut(s) 409, 2649
BspTNI GGTCTC 1 cut(s) 944
BsrDI GCAATG 3 cut(s) 849, 1107, 2359
BsrGI TGTACA 2 cut(s) 573, 1748
BsrI ACTGG 6 cut(s) 149, 344, 697, 890, 1629, 2601
BssECI CCNNGG 1 cut(s) 2123
BssNAI GTATAC 1 cut(s) 1601
BssNI GRCGYC 1 cut(s) 1386
BssT1I CCWWGG 1 cut(s) 2123
Bst1107I GTATAC 1 cut(s) 1601
Bst2UI CCWGG 1 cut(s) 2801
Bst4CI ACNGT 2 cut(s) 1127, 1987
Bst6I CTCTTC 4 cut(s) 851, 1035, 2124, 2393
BstACI GRCGYC 1 cut(s) 1386
BstAPI GCANNNNNTGC 1 cut(s) 917
BstAUI TGTACA 2 cut(s) 573, 1748
BstBAI YACGTR 1 cut(s) 1412
BstBI TTCGAA 2 cut(s) 409, 2649
BstC8I GCNNGC 2 cut(s) 75, 2656
BstDEI CTNAG 6 cut(s) 1581, 1595, 1756, 2021, 2409, 2863
BstENI CCTNNNNNAGG 1 cut(s) 1939
BstF5I GGATG 8 cut(s) 245, 340, 630, 682, 1452, 1823, 2821, 2911
BstH2I RGCGCY 1 cut(s) 74
BstHHI GCGC 2 cut(s) 73, 2778
BstMAI GTCTC 4 cut(s) 944, 1625, 1895, 2390
BstMWI GCNNNNNNNGC 5 cut(s) 917, 956, 1591, 2552, 2784
BstNI CCWGG 1 cut(s) 2801
BstSCI CCNGG 1 cut(s) 2799
BstSFI CTRYAG 3 cut(s) 2093, 2779, 2810
BstV1I GCAGC 4 cut(s) 547, 753, 1664, 2723
BstV2I GAAGAC 2 cut(s) 2889, 2919
BstX2I RGATCY 3 cut(s) 28, 1152, 1948
BstYI RGATCY 3 cut(s) 28, 1152, 1948
BstZ17I GTATAC 1 cut(s) 1601
Bsu15I ATCGAT 1 cut(s) 276
BsuI GTATCC 2 cut(s) 795, 1942
BsuRI GGCC 3 cut(s) 546, 1537, 1964
BsuTUI ATCGAT 1 cut(s) 276
BtrI CACGTC 1 cut(s) 2084
BtsCI GGATG 8 cut(s) 245, 340, 630, 682, 1452, 1823, 2821, 2911
BtsI GCAGTG 1 cut(s) 1421
BtsIMutI CAGTG 2 cut(s) 1421, 2591
BveI ACCTGC 2 cut(s) 2181, 2360
Cac8I GCNNGC 2 cut(s) 75, 2656
CaiI CAGNNNCTG 1 cut(s) 2564
CciI TCATGA 1 cut(s) 2719
CfoI GCGC 2 cut(s) 73, 2778
Cfr13I GGNCC 3 cut(s) 204, 1406, 2257
ClaI ATCGAT 1 cut(s) 276
CseI GACGC 1 cut(s) 1375
CsiI ACCWGGT 1 cut(s) 2799
Csp6I GTAC 7 cut(s) 41, 365, 574, 923, 1749, 2631, 2860
CspCI CAANNNNNGTGG 2 cut(s) 2550, 2585
CviAII CATG 8 cut(s) 83, 184, 539, 1142, 1390, 2678, 2720, 2887
CviQI GTAC 7 cut(s) 41, 365, 574, 923, 1749, 2631, 2860
DdeI CTNAG 6 cut(s) 1581, 1595, 1756, 2021, 2409, 2863
DraI TTTAAA 1 cut(s) 1725
EaeI YGGCCR 1 cut(s) 1962
Eam1104I CTCTTC 4 cut(s) 851, 1035, 2124, 2393
EarI CTCTTC 4 cut(s) 851, 1035, 2124, 2393
EciI GGCGGA 3 cut(s) 242, 350, 1419
Ecl136II GAGCTC 2 cut(s) 844, 1195
Eco130I CCWWGG 1 cut(s) 2123
Eco147I AGGCCT 1 cut(s) 546
Eco24I GRGCYC 2 cut(s) 846, 1197
Eco31I GGTCTC 1 cut(s) 944
Eco47I GGWCC 3 cut(s) 204, 1406, 2257
Eco47III AGCGCT 1 cut(s) 72
Eco53kI GAGCTC 2 cut(s) 844, 1195
Eco57I CTGAAG 2 cut(s) 1442, 2541
Eco72I CACGTG 1 cut(s) 1412
Eco88I CYCGRG 2 cut(s) 360, 1898
EcoICRI GAGCTC 2 cut(s) 844, 1195
EcoNI CCTNNNNNAGG 1 cut(s) 1939
EcoRI GAATTC 3 cut(s) 170, 1695, 2420
EcoRII CCWGG 1 cut(s) 2799
EcoT14I CCWWGG 1 cut(s) 2123
EcoT38I GRGCYC 2 cut(s) 846, 1197
ErhI CCWWGG 1 cut(s) 2123
FaeI CATG 8 cut(s) 86, 187, 542, 1145, 1393, 2681, 2723, 2890
FaqI GGGAC 1 cut(s) 1508
FatI CATG 8 cut(s) 82, 183, 538, 1141, 1389, 2677, 2719, 2886
FauI CCCGC 2 cut(s) 1312, 2357
FbaI TGATCA 2 cut(s) 1768, 2581
FblI GTMKAC 1 cut(s) 1600
Fnu4HI GCNGC 5 cut(s) 225, 536, 742, 1678, 2737
FokI GGATG 8 cut(s) 252, 327, 637, 689, 1459, 1830, 2828, 2918
FriOI GRGCYC 2 cut(s) 846, 1197
Fsp4HI GCNGC 5 cut(s) 225, 536, 742, 1678, 2737
GlaI GCGC 2 cut(s) 72, 2777
GluI GCNGC 5 cut(s) 225, 536, 742, 1678, 2737
HaeII RGCGCY 1 cut(s) 74
HaeIII GGCC 3 cut(s) 546, 1537, 1964
HapII CCGG 1 cut(s) 1956
HgaI GACGC 1 cut(s) 1375
HhaI GCGC 2 cut(s) 73, 2778
Hin1I GRCGYC 1 cut(s) 1386
Hin1II CATG 8 cut(s) 86, 187, 542, 1145, 1393, 2681, 2723, 2890
Hin6I GCGC 2 cut(s) 71, 2776
HinP1I GCGC 2 cut(s) 71, 2776
HindIII AAGCTT 7 cut(s) 834, 1583, 1592, 1753, 1793, 2036, 2108
HpaII CCGG 1 cut(s) 1956
HphI GGTGA 8 cut(s) 77, 409, 629, 1178, 1284, 2789, 2882, 2921
Hpy166II GTNNAC 5 cut(s) 685, 1282, 1342, 1601, 2797
Hpy8I GTNNAC 5 cut(s) 685, 1282, 1342, 1601, 2797
HpyAV CCTTC 5 cut(s) 578, 614, 871, 1154, 2659
HpyCH4III ACNGT 2 cut(s) 1127, 1987
HpyCH4IV ACGT 6 cut(s) 313, 1312, 1411, 2083, 2290, 2500
HpyF10VI GCNNNNNNNGC 5 cut(s) 917, 956, 1591, 2552, 2784
HpyF3I CTNAG 6 cut(s) 1581, 1595, 1756, 2021, 2409, 2863
HpySE526I ACGT 6 cut(s) 313, 1312, 1411, 2083, 2290, 2500
Hsp92I GRCGYC 1 cut(s) 1386
Hsp92II CATG 8 cut(s) 86, 187, 542, 1145, 1393, 2681, 2723, 2890
HspAI GCGC 2 cut(s) 71, 2776
Ksp22I TGATCA 2 cut(s) 1768, 2581
LguI GCTCTTC 1 cut(s) 851
LmnI GCTCC 3 cut(s) 841, 1729, 2485
Lsp1109I GCAGC 4 cut(s) 547, 753, 1664, 2723
LweI GCATC 3 cut(s) 907, 1233, 1468
MabI ACCWGGT 1 cut(s) 2799
MaeII ACGT 6 cut(s) 313, 1312, 1411, 2083, 2290, 2500
MaeIII GTNAC 9 cut(s) 563, 1064, 1146, 1166, 1290, 1649, 1820, 2113, 2345
MfeI CAATTG 2 cut(s) 453, 1744
MflI RGATCY 3 cut(s) 28, 1152, 1948
MhlI GDGCHC 3 cut(s) 846, 1197, 2591
MlyI GAGTC 5 cut(s) 1298, 1816, 1821, 2258, 2663
MmeI TCCRAC 3 cut(s) 328, 1601, 1759
MroXI GAANNNNTTC 2 cut(s) 355, 1097
MslI CAYNNNNRTG 2 cut(s) 1394, 2613
MspA1I CMGCKG 1 cut(s) 2867
MspI CCGG 1 cut(s) 1956
MspR9I CCNGG 1 cut(s) 2801
MunI CAATTG 2 cut(s) 453, 1744
MvaI CCWGG 1 cut(s) 2801
MwoI GCNNNNNNNGC 5 cut(s) 917, 956, 1591, 2552, 2784
NlaIII CATG 8 cut(s) 86, 187, 542, 1145, 1393, 2681, 2723, 2890
NlaIV GGNNCC 2 cut(s) 30, 47
NmuCI GTSAC 4 cut(s) 1166, 1290, 1820, 2345
NspV TTCGAA 2 cut(s) 409, 2649
PaeR7I CTCGAG 2 cut(s) 360, 1898
PagI TCATGA 1 cut(s) 2719
PceI AGGCCT 1 cut(s) 546
PciSI GCTCTTC 1 cut(s) 851
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PdmI GAANNNNTTC 2 cut(s) 355, 1097
PkrI GCNGC 5 cut(s) 226, 537, 743, 1679, 2738
PleI GAGTC 5 cut(s) 1297, 1815, 1821, 2257, 2663
PmaCI CACGTG 1 cut(s) 1412
PmlI CACGTG 1 cut(s) 1412
PpsI GAGTC 5 cut(s) 1297, 1815, 1821, 2257, 2663
Ppu21I YACGTR 1 cut(s) 1412
PsiI TTATAA 2 cut(s) 471, 1469
Psp124BI GAGCTC 2 cut(s) 846, 1197
Psp6I CCWGG 1 cut(s) 2799
PspCI CACGTG 1 cut(s) 1412
PspGI CCWGG 1 cut(s) 2799
PspN4I GGNNCC 2 cut(s) 30, 47
PspPI GGNCC 3 cut(s) 204, 1406, 2257
PsrI GAACNNNNNNTAC 2 cut(s) 294, 326
PstI CTGCAG 1 cut(s) 2097
PstNI CAGNNNCTG 1 cut(s) 2564
PsuI RGATCY 3 cut(s) 28, 1152, 1948
PvuII CAGCTG 1 cut(s) 2867
RsaI GTAC 7 cut(s) 42, 366, 575, 924, 1750, 2632, 2861
RsaNI GTAC 7 cut(s) 41, 365, 574, 923, 1749, 2631, 2860
RseI CAYNNNNRTG 2 cut(s) 1394, 2613
SacI GAGCTC 2 cut(s) 846, 1197
SapI GCTCTTC 1 cut(s) 851
SatI GCNGC 5 cut(s) 225, 536, 742, 1678, 2737
Sau96I GGNCC 3 cut(s) 204, 1406, 2257
ScaI AGTACT 1 cut(s) 2861
SchI GAGTC 5 cut(s) 1298, 1816, 1821, 2258, 2663
ScrFI CCNGG 1 cut(s) 2801
SduI GDGCHC 3 cut(s) 846, 1197, 2591
SexAI ACCWGGT 1 cut(s) 2799
SfaNI GCATC 3 cut(s) 907, 1233, 1468
SfcI CTRYAG 3 cut(s) 2093, 2779, 2810
Sfr274I CTCGAG 2 cut(s) 360, 1898
SfuI TTCGAA 2 cut(s) 409, 2649
SinI GGWCC 3 cut(s) 204, 1406, 2257
SlaI CTCGAG 2 cut(s) 360, 1898
SmiMI CAYNNNNRTG 2 cut(s) 1394, 2613
SmlI CTYRAG 5 cut(s) 215, 360, 933, 1898, 2158
SmoI CTYRAG 5 cut(s) 215, 360, 933, 1898, 2158
SpeI ACTAGT 1 cut(s) 2759
SseBI AGGCCT 1 cut(s) 546
SsiI CCGC 6 cut(s) 224, 227, 335, 1305, 1404, 2364
SstI GAGCTC 2 cut(s) 846, 1197
StuI AGGCCT 1 cut(s) 546
StyD4I CCNGG 1 cut(s) 2799
StyI CCWWGG 1 cut(s) 2123
TaaI ACNGT 2 cut(s) 1127, 1987
TaiI ACGT 6 cut(s) 316, 1315, 1414, 2086, 2293, 2503
TaqI TCGA 9 cut(s) 276, 361, 409, 492, 1440, 1899, 2150, 2424, 2649
TatI WGTACW 5 cut(s) 573, 922, 1748, 2630, 2859
TauI GCSGC 1 cut(s) 227
TscAI CASTG 2 cut(s) 1428, 2591
TseFI GTSAC 4 cut(s) 1166, 1290, 1820, 2345
TseI GCWGC 4 cut(s) 535, 741, 1677, 2736
Tsp45I GTSAC 4 cut(s) 1166, 1290, 1820, 2345
TspGWI ACGGA 2 cut(s) 58, 814
TspRI CASTG 2 cut(s) 1428, 2591
VpaK11BI GGWCC 3 cut(s) 204, 1406, 2257
XagI CCTNNNNNAGG 1 cut(s) 1939
XhoI CTCGAG 2 cut(s) 360, 1898
XmiI GTMKAC 1 cut(s) 1600
XmnI GAANNNNTTC 2 cut(s) 355, 1097
ZrmI AGTACT 1 cut(s) 2861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.