Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002938.1

Orthogroup ID

OG0008889

Physical Location & Seq

Genomic Coordinates Reverse (-)

15936 .. 18915

Gene Structure 2980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002938.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2799 bp

atgtttcatcaaaaatttgaccaagctattaaagtgctagacaaactgcatttttttgacgtaaccagtgtctcgtactttaccattggcaggtttgagtcgaagtttattcatgggattgttgaagagatttggaaacgagtacatcttacctatttgcatgtggcggattatccggtaggaatagagtctcgtatacgtgatatggataggcttgtaggtgttggaggggatgatattcgtatggtcgggatatgggggcctggtggaataggtaaaacaacaattgccaaagctgtttataattcaattattcacaagttcgaatgtagctgcttcctggaaaatattagagaaagatcagcgcaatatggaggcctcgtgaaactacaaagattttttctttcccacatcctaatgggaaaagaaatcaaattagccacttgcaatgaaggaatgacagttataaaggaaagattaagccacaaatgggttctgttagttcttgatgatgtgaatgacttggaacagttaagaatattagctggaggatctcagtggtttggtttaggaagcagggttattattacaacaagagataagcatttattaattgctcatcacgtcaatctaatatacaaggtcaaaaaattggatcatcatgaagcttttgagctcttcagttacaattgcttcccaaagaaggaactttcaaatgagtctgcgaaactggcaattgatgcagtacagtacgcccagggccttccattagctcttgtagctttaggctcagttctttgtggtagatctatagaggagtggaaagaagcgagagatggtaattggcaatttggtatcacaggtctgtatgacactcttaaaataagtattgatgcattggaacatcaggttagagaagttttccttgacatcgcatgtttctttagaggtgaaaataacaatcatgtgatacagttacttaaagggggtggcatcaatcctaacatcagtcttagtatcctccaagaaaaggcggtgataagtattaatgaagaaagccatatctggatgcacaacttggtggaggtaatgggaaaaagaatagttcacattgagtccccaaatgaaccctgcaaacgcagtagattgtggtcttctgatgatgtttacgatgtattaactaaaggcaaaggaacaaacaaagtcaaaggtatcatggtaaagttgcctgaaccagatgagatagtattgagtgctgcaagcttttcacggatgaaaaatcttaaatacttcataaactgtaatgcatctttttcgggaaacattgattatctccctgatgagttgaggctaattgattggcctgcatttcctttcgaatctttaccaatcaattttattccgaggaagcttgttaaactcagtatgcctcgcagctgcatgtcacaactgggggagagattcaagcactccaaaactctgaaatatataaatctggaaagctgcccattcttgacagaaatcccgaacttgtctggatttccaaatttaaggcacttgaatttgagcaactgtacggctttagttgagcttgatgattctattggattccttaataagcttgtgtttttaagtctatcaggatgccgtaatattactaagtttccaagaagaatcgccttgaaatctgcaaaacatattactcttagaggttgcagaatgcttgagtctttccccgcaattgtaaaaaggatggagtgcttgacaagcttagatctatccggcactgccatcaaagaattgccttcacaaattgcatctctgattagccttgaagagttaactataagagaatgtgacaaccttactactcttccatgcagcatatatgatttgcagaatttggggtctcttgatctccaaggctgctcaaaacttgttacgtttccaaaatggtgtgcaaaatcagtcccaacatacttgaacatttcacatgacttgacttatctaaatctacgtggctgcaggatgcttgaggaaattcctgaacttccaccaaaagtgaaatgggtaaatgcagctgattgcttattgttggaacgatttacgaaattatcaaacatcttggaacatagagagtcgcaaatgatcaaatgtgtttcactgttgaattgtcagagactgtgtggaagtctggccaacaaaatggaagagattgaagatactttactgaatgaggtcactctctgctctctgtttctctcatgcaagcaatctgaattcaacgttgtttttccaggagctgaagttccaaagtggttcaaccattggaagtacttgagtaatctagttgatacatctgaattttcttttgaaatccctctcaatttcaaattgggggacaaaggattggctatatgtgcagtggctacttctgtagatgatcttggtcattgcgctttcacagccagaattagcattcaggaagaaagtagtattacacgttcgtttagttttgaagcaaaagaaatggtctcagctcatgtgtggctgctctatattccattggttaactttgctcatcgtcaatccttgccttttacctgtcgagttactttggaacatactagccaaggttcagcgcgctgtaaaagctatggggtgcacctagtaatgcctcaaggtgaatatgatgactacatggaagatgactactccgtctgctcatctagtgaagatgataagagtaatatttcagatcggaaaaagaaaaaagaaaagatgaagaaacggaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC TIR

Protein Analysis

932

Amino Acids

105.86

Weight (kDa)

7.97

Isoelectric Point (pI)

45.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008889)

Species	Orthologous Gene IDs
prunus_persica	Prupe.8G110000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0262301 RchiOBHm_Chr6g0262321
rosa_laevigata	RLG00000014024 RLG00000014034 RLG00000014334 RLG00000014342 RLG00000035301
rosa_multiflora	Rmu_sc0000565.1_g000041 Rmu_sc0002938.1_g000003 Rmu_sc0002938.1_g000011 Rmu_ssc0000388.1_g000023
rosa_roxburghii	Rroxscaffold_7G00201070 Rroxscaffold_7G00201110 Rroxscaffold_7G00204190 Rroxscaffold_7G00204430
rosa_rugosa	Rorug06G0029600 Rorug06G0029800
rosa_samantha	Rh1AG095400 Rh1AG095600 Rh6AG151300 Rh6DG136200
rosa_wichuraiana	Rw6G013100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 467
AasI	GACNNNNNNGTC	1 cut(s)	2717
Acc36I	ACCTGC	1 cut(s)	81
AccI	GTMKAC	1 cut(s)	196
AccII	CGCG	1 cut(s)	2644
AciI	CCGC	3 cut(s)	167, 1034, 1737
AclI	AACGTT	1 cut(s)	2286
AclWI	GGATC	2 cut(s)	559, 663
AcoI	YGGCCR	1 cut(s)	2196
AcsI	RAATTY	7 cut(s)	14, 1546, 1561, 1900, 2040, 2279, 2363
AcuI	CTGAAG	2 cut(s)	664, 2325
AfaI	GTAC	6 cut(s)	77, 144, 747, 752, 1576, 2336
AfiI	CCNNNNNNNGG	4 cut(s)	90, 490, 703, 1030
AflIII	ACRYGT	1 cut(s)	2501
AjiI	CACGTC	1 cut(s)	625
AjnI	CCWGG	4 cut(s)	262, 339, 756, 2296
AloI	GAACNNNNNNTCC	2 cut(s)	2292, 2324
Alw21I	GWGCWC	2 cut(s)	678, 2667
Alw26I	GTCTC	5 cut(s)	76, 195, 1914, 2173, 2539
Alw44I	GTGCAC	1 cut(s)	2663
AlwI	GGATC	2 cut(s)	559, 663
AlwNI	CAGNNNCTG	2 cut(s)	2182, 2303
AoxI	GGCC	5 cut(s)	260, 376, 760, 1361, 2196
ApaLI	GTGCAC	1 cut(s)	2663
ApoI	RAATTY	7 cut(s)	14, 1546, 1561, 1900, 2040, 2279, 2363
AseI	ATTAAT	2 cut(s)	611, 1047
AspLEI	GCGC	4 cut(s)	367, 2459, 2644, 2646
AspS9I	GGNCC	2 cut(s)	260, 760
AsuHPI	GGTGA	3 cut(s)	962, 1048, 2696
AsuII	TTCGAA	2 cut(s)	324, 1377
BaeGI	GKGCMC	1 cut(s)	2667
BalI	TGGCCA	1 cut(s)	2198
BanII	GRGCYC	1 cut(s)	678
BarI	GAAGNNNNNNTAC	2 cut(s)	2211, 2243
BauI	CACGAG	1 cut(s)	380
BbsI	GAAGAC	1 cut(s)	1146
Bbv12I	GWGCWC	2 cut(s)	678, 2667
BccI	CCATC	3 cut(s)	830, 1747, 1799
BceAI	ACGGC	2 cut(s)	1593, 1632
BcgI	CGANNNNNNTGC	2 cut(s)	1296, 1330
BciT130I	CCWGG	4 cut(s)	264, 341, 758, 2298
BciVI	GTATCC	1 cut(s)	1028
BclI	TGATCA	1 cut(s)	2148
BcoDI	GTCTC	5 cut(s)	76, 195, 1914, 2173, 2539
BfaI	CTAG	5 cut(s)	38, 2348, 2628, 2669, 2730
BfmI	CTRYAG	3 cut(s)	810, 2023, 2436
BfuAI	ACCTGC	1 cut(s)	81
BfuI	GTATCC	1 cut(s)	1028
BglII	AGATCT	2 cut(s)	806, 1774
BmcAI	AGTACT	1 cut(s)	2336
Bme1390I	CCNGG	4 cut(s)	264, 341, 758, 2298
BmgBI	CACGTC	1 cut(s)	625
BmgT120I	GGNCC	2 cut(s)	260, 760
BmiI	GGNNCC	1 cut(s)	261
BmrFI	CCNGG	4 cut(s)	264, 341, 758, 2298
BmrI	ACTGGG	1 cut(s)	1460
BmsI	GCATC	8 cut(s)	730, 883, 1002, 1059, 1316, 1634, 1826, 2019
BmuI	ACTGGG	1 cut(s)	1460
BpiI	GAAGAC	1 cut(s)	1146
BpmI	CTGGAG	1 cut(s)	567
Bpu14I	TTCGAA	2 cut(s)	324, 1377
BpuEI	CTTGAG	4 cut(s)	1745, 2054, 2359, 2664
BsaAI	YACGTR	2 cut(s)	200, 2018
BsaI	GGTCTC	2 cut(s)	1914, 2539
BsaJI	CCNNGG	5 cut(s)	756, 757, 1403, 1921, 2632
BsaWI	WCCGGW	1 cut(s)	175
BsaXI	ACNNNNNCTCC	4 cut(s)	366, 396, 2292, 2322
Bsc4I	CCNNNNNNNGG	4 cut(s)	90, 490, 703, 1030
Bse1I	ACTGG	3 cut(s)	66, 735, 1455
Bse3DI	GCAATG	2 cut(s)	454, 2452
BseBI	CCWGG	4 cut(s)	264, 341, 758, 2298
BseDI	CCNNGG	5 cut(s)	756, 757, 1403, 1921, 2632
BseGI	GGATG	7 cut(s)	238, 411, 1074, 1278, 1649, 1758, 2034
BseLI	CCNNNNNNNGG	4 cut(s)	90, 490, 703, 1030
BseMI	GCAATG	2 cut(s)	454, 2452
BseMII	CTCAG	4 cut(s)	569, 804, 1435, 2550
BseNI	ACTGG	3 cut(s)	66, 735, 1455
BsePI	GCGCGC	1 cut(s)	2642
BseRI	GAGGAG	1 cut(s)	830
BseSI	GKGCMC	1 cut(s)	2667
BsgI	GTGCAG	1 cut(s)	2442
Bsh1236I	CGCG	1 cut(s)	2644
BshFI	GGCC	5 cut(s)	262, 378, 762, 1363, 2198
BsiHKAI	GWGCWC	2 cut(s)	678, 2667
BsiSI	CCGG	2 cut(s)	176, 1782
BslFI	GGGAC	3 cut(s)	1102, 1955, 2414
BslI	CCNNNNNNNGG	4 cut(s)	90, 490, 703, 1030
BsmAI	GTCTC	5 cut(s)	76, 195, 1914, 2173, 2539
BsmFI	GGGAC	3 cut(s)	1102, 1955, 2414
BsmI	GAATGC	2 cut(s)	1725, 2478
BsnI	GGCC	5 cut(s)	262, 378, 762, 1363, 2198
Bso31I	GGTCTC	2 cut(s)	1914, 2539
Bsp119I	TTCGAA	2 cut(s)	324, 1377
Bsp1286I	GDGCHC	2 cut(s)	678, 2667
Bsp143I	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
BspACI	CCGC	3 cut(s)	167, 1034, 1737
BspANI	GGCC	5 cut(s)	262, 378, 762, 1363, 2198
BspCNI	CTCAG	4 cut(s)	568, 803, 1434, 2549
BspFNI	CGCG	1 cut(s)	2644
BspHI	TCATGA	1 cut(s)	661
BspLI	GGNNCC	1 cut(s)	261
BspMAI	CTGCAG	1 cut(s)	2027
BspMI	ACCTGC	1 cut(s)	81
BspPI	GGATC	2 cut(s)	559, 663
BspQI	GCTCTTC	1 cut(s)	683
BspT104I	TTCGAA	2 cut(s)	324, 1377
BspTNI	GGTCTC	2 cut(s)	1914, 2539
BsrDI	GCAATG	2 cut(s)	454, 2452
BsrI	ACTGG	3 cut(s)	66, 735, 1455
BssECI	CCNNGG	5 cut(s)	756, 757, 1403, 1921, 2632
BssHII	GCGCGC	1 cut(s)	2642
BssMI	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
BssNAI	GTATAC	1 cut(s)	197
BssSI	CACGAG	1 cut(s)	380
BssT1I	CCWWGG	2 cut(s)	1921, 2632
Bst1107I	GTATAC	1 cut(s)	197
Bst2BI	CACGAG	1 cut(s)	380
Bst2UI	CCWGG	4 cut(s)	264, 341, 758, 2298
Bst4CI	ACNGT	8 cut(s)	463, 531, 750, 975, 1301, 1574, 2166, 2184
Bst6I	CTCTTC	5 cut(s)	120, 683, 1830, 1878, 2205
BstAPI	GCANNNNNTGC	1 cut(s)	740
BstBAI	YACGTR	2 cut(s)	200, 2018
BstBI	TTCGAA	2 cut(s)	324, 1377
BstC8I	GCNNGC	4 cut(s)	1261, 1365, 2270, 2644
BstDEI	CTNAG	8 cut(s)	555, 790, 1013, 1421, 1659, 1706, 1771, 2536
BstF5I	GGATG	7 cut(s)	238, 411, 1074, 1278, 1649, 1758, 2034
BstFNI	CGCG	1 cut(s)	2644
BstHHI	GCGC	4 cut(s)	367, 2459, 2644, 2646
BstKTI	GATC	9 cut(s)	362, 554, 658, 809, 1777, 1918, 2151, 2446, 2761
BstMAI	GTCTC	5 cut(s)	76, 195, 1914, 2173, 2539
BstMBI	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
BstMWI	GCNNNNNNNGC	7 cut(s)	731, 740, 779, 1767, 2420, 2465, 2652
BstNI	CCWGG	4 cut(s)	264, 341, 758, 2298
BstNSI	RCATGY	3 cut(s)	164, 939, 1444
BstSCI	CCNGG	4 cut(s)	262, 339, 756, 2296
BstSFI	CTRYAG	3 cut(s)	810, 2023, 2436
BstSLI	GKGCMC	1 cut(s)	2667
BstUI	CGCG	1 cut(s)	2644
BstV2I	GAAGAC	1 cut(s)	1146
BstX2I	RGATCY	3 cut(s)	551, 806, 1774
BstXI	CCANNNNNNTGG	1 cut(s)	2206
BstYI	RGATCY	3 cut(s)	551, 806, 1774
BstZ17I	GTATAC	1 cut(s)	197
BsuI	GTATCC	1 cut(s)	1028
BsuRI	GGCC	5 cut(s)	262, 378, 762, 1363, 2198
BtgZI	GCGATG	1 cut(s)	916
BtrI	CACGTC	1 cut(s)	625
BtsCI	GGATG	7 cut(s)	238, 411, 1074, 1278, 1649, 1758, 2034
BtsI	GCAGTG	2 cut(s)	1785, 2430
BtsIMutI	CAGTG	5 cut(s)	73, 563, 1785, 2162, 2430
BveI	ACCTGC	1 cut(s)	81
Cac8I	GCNNGC	4 cut(s)	1261, 1365, 2270, 2644
CaiI	CAGNNNCTG	2 cut(s)	2182, 2303
CciI	TCATGA	1 cut(s)	661
CfoI	GCGC	4 cut(s)	367, 2459, 2644, 2646
Cfr13I	GGNCC	2 cut(s)	260, 760
Csp6I	GTAC	6 cut(s)	76, 143, 746, 751, 1575, 2335
CviQI	GTAC	6 cut(s)	76, 143, 746, 751, 1575, 2335
DdeI	CTNAG	8 cut(s)	555, 790, 1013, 1421, 1659, 1706, 1771, 2536
DpnI	GATC	9 cut(s)	361, 553, 657, 808, 1776, 1917, 2150, 2445, 2760
DpnII	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
DrdI	GACNNNNNNGTC	1 cut(s)	2717
DseDI	GACNNNNNNGTC	1 cut(s)	2717
EaeI	YGGCCR	1 cut(s)	2196
Eam1104I	CTCTTC	5 cut(s)	120, 683, 1830, 1878, 2205
EarI	CTCTTC	5 cut(s)	120, 683, 1830, 1878, 2205
EciI	GGCGGA	1 cut(s)	182
Ecl136II	GAGCTC	1 cut(s)	676
Eco130I	CCWWGG	2 cut(s)	1921, 2632
Eco147I	AGGCCT	1 cut(s)	378
Eco24I	GRGCYC	1 cut(s)	678
Eco31I	GGTCTC	2 cut(s)	1914, 2539
Eco53kI	GAGCTC	1 cut(s)	676
Eco57I	CTGAAG	2 cut(s)	664, 2325
EcoICRI	GAGCTC	1 cut(s)	676
EcoO109I	RGGNCCY	2 cut(s)	260, 760
EcoRI	GAATTC	1 cut(s)	2279
EcoRII	CCWGG	4 cut(s)	262, 339, 756, 2296
EcoT14I	CCWWGG	2 cut(s)	1921, 2632
EcoT22I	ATGCAT	2 cut(s)	898, 1309
EcoT38I	GRGCYC	1 cut(s)	678
ErhI	CCWWGG	2 cut(s)	1921, 2632
FalI	AAGNNNNNCTT	2 cut(s)	909, 941
FaqI	GGGAC	3 cut(s)	1102, 1955, 2414
FauI	CCCGC	1 cut(s)	1744
FbaI	TGATCA	1 cut(s)	2148
FblI	GTMKAC	1 cut(s)	196
FokI	GGATG	7 cut(s)	245, 398, 1081, 1285, 1656, 1765, 2041
FriOI	GRGCYC	1 cut(s)	678
FspBI	CTAG	5 cut(s)	38, 2348, 2628, 2669, 2730
GlaI	GCGC	4 cut(s)	366, 2458, 2643, 2645
GsuI	CTGGAG	1 cut(s)	567
HaeIII	GGCC	5 cut(s)	262, 378, 762, 1363, 2198
HapII	CCGG	2 cut(s)	176, 1782
HhaI	GCGC	4 cut(s)	367, 2459, 2644, 2646
Hin6I	GCGC	4 cut(s)	365, 2457, 2642, 2644
HinP1I	GCGC	4 cut(s)	365, 2457, 2642, 2644
HincII	GTYRAC	2 cut(s)	1842, 2572
HindII	GTYRAC	2 cut(s)	1842, 2572
HindIII	AAGCTT	5 cut(s)	666, 1261, 1409, 1619, 1768
HpaI	GTTAAC	2 cut(s)	1842, 2572
HpaII	CCGG	2 cut(s)	176, 1782
HphI	GGTGA	3 cut(s)	962, 1048, 2696
Hpy166II	GTNNAC	6 cut(s)	197, 1108, 1168, 1842, 2572, 2665
Hpy188I	TCNGA	9 cut(s)	1159, 1404, 1482, 1824, 2178, 2278, 2362, 2758, 2763
Hpy8I	GTNNAC	6 cut(s)	197, 1108, 1168, 1842, 2572, 2665
HpyAV	CCTTC	4 cut(s)	446, 697, 773, 1815
HpyCH4III	ACNGT	8 cut(s)	463, 531, 750, 975, 1301, 1574, 2166, 2184
HpyCH4IV	ACGT	7 cut(s)	60, 199, 624, 1943, 2017, 2286, 2503
HpyF10VI	GCNNNNNNNGC	7 cut(s)	731, 740, 779, 1767, 2420, 2465, 2652
HpyF3I	CTNAG	8 cut(s)	555, 790, 1013, 1421, 1659, 1706, 1771, 2536
HpySE526I	ACGT	7 cut(s)	60, 199, 624, 1943, 2017, 2286, 2503
HspAI	GCGC	4 cut(s)	365, 2457, 2642, 2644
Ksp22I	TGATCA	1 cut(s)	2148
KspAI	GTTAAC	2 cut(s)	1842, 2572
Kzo9I	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
LguI	GCTCTTC	1 cut(s)	683
LmnI	GCTCC	1 cut(s)	2300
LweI	GCATC	8 cut(s)	730, 883, 1002, 1059, 1316, 1634, 1826, 2019
MaeI	CTAG	5 cut(s)	38, 2348, 2628, 2669, 2730
MaeII	ACGT	7 cut(s)	60, 199, 624, 1943, 2017, 2286, 2503
MaeIII	GTNAC	8 cut(s)	61, 683, 975, 1443, 1856, 1939, 2239, 2611
MalI	GATC	9 cut(s)	361, 553, 657, 808, 1776, 1917, 2150, 2445, 2760
MboI	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
MfeI	CAATTG	4 cut(s)	285, 688, 735, 1740
MflI	RGATCY	3 cut(s)	551, 806, 1774
MhlI	GDGCHC	2 cut(s)	678, 2667
MlsI	TGGCCA	1 cut(s)	2198
MluNI	TGGCCA	1 cut(s)	2198
MlyI	GAGTC	6 cut(s)	107, 197, 728, 1124, 1736, 2147
MmeI	TCCRAC	2 cut(s)	205, 2076
Mox20I	TGGCCA	1 cut(s)	2198
Mph1103I	ATGCAT	2 cut(s)	898, 1309
MscI	TGGCCA	1 cut(s)	2198
MslI	CAYNNNNRTG	1 cut(s)	416
Msp20I	TGGCCA	1 cut(s)	2198
MspA1I	CMGCKG	2 cut(s)	1437, 2081
MspI	CCGG	2 cut(s)	176, 1782
MspR9I	CCNGG	4 cut(s)	264, 341, 758, 2298
MunI	CAATTG	4 cut(s)	285, 688, 735, 1740
Mva1269I	GAATGC	2 cut(s)	1725, 2478
MvaI	CCWGG	4 cut(s)	264, 341, 758, 2298
MvnI	CGCG	1 cut(s)	2644
MwoI	GCNNNNNNNGC	7 cut(s)	731, 740, 779, 1767, 2420, 2465, 2652
NdeII	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
NlaIV	GGNNCC	1 cut(s)	261
NmuCI	GTSAC	3 cut(s)	1443, 1856, 2239
NsiI	ATGCAT	2 cut(s)	898, 1309
NspI	RCATGY	3 cut(s)	164, 939, 1444
NspV	TTCGAA	2 cut(s)	324, 1377
PagI	TCATGA	1 cut(s)	661
PasI	CCCWGGG	1 cut(s)	757
PauI	GCGCGC	1 cut(s)	2642
PceI	AGGCCT	1 cut(s)	378
PciSI	GCTCTTC	1 cut(s)	683
PctI	GAATGC	2 cut(s)	1725, 2478
PfeI	GAWTC	5 cut(s)	1379, 1461, 1598, 1608, 1674
PfoI	TCCNGGA	2 cut(s)	339, 2296
PleI	GAGTC	6 cut(s)	106, 196, 727, 1123, 1735, 2146
PpsI	GAGTC	6 cut(s)	106, 196, 727, 1123, 1735, 2146
Ppu21I	YACGTR	2 cut(s)	200, 2018
PshBI	ATTAAT	2 cut(s)	611, 1047
PsiI	TTATAA	2 cut(s)	303, 467
Psp124BI	GAGCTC	1 cut(s)	678
Psp1406I	AACGTT	1 cut(s)	2286
Psp6I	CCWGG	4 cut(s)	262, 339, 756, 2296
PspGI	CCWGG	4 cut(s)	262, 339, 756, 2296
PspN4I	GGNNCC	1 cut(s)	261
PspPI	GGNCC	2 cut(s)	260, 760
PsrI	GAACNNNNNNTAC	2 cut(s)	2488, 2520
PstI	CTGCAG	1 cut(s)	2027
PstNI	CAGNNNCTG	2 cut(s)	2182, 2303
PsuI	RGATCY	3 cut(s)	551, 806, 1774
PteI	GCGCGC	1 cut(s)	2642
PvuII	CAGCTG	2 cut(s)	1437, 2081
RsaI	GTAC	6 cut(s)	77, 144, 747, 752, 1576, 2336
RsaNI	GTAC	6 cut(s)	76, 143, 746, 751, 1575, 2335
RseI	CAYNNNNRTG	1 cut(s)	416
SacI	GAGCTC	1 cut(s)	678
SapI	GCTCTTC	1 cut(s)	683
Sau3AI	GATC	9 cut(s)	359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
Sau96I	GGNCC	2 cut(s)	260, 760
ScaI	AGTACT	1 cut(s)	2336
SchI	GAGTC	6 cut(s)	107, 197, 728, 1124, 1736, 2147
ScrFI	CCNGG	4 cut(s)	264, 341, 758, 2298
SduI	GDGCHC	2 cut(s)	678, 2667
SfaNI	GCATC	8 cut(s)	730, 883, 1002, 1059, 1316, 1634, 1826, 2019
SfcI	CTRYAG	3 cut(s)	810, 2023, 2436
SfuI	TTCGAA	2 cut(s)	324, 1377
SmiMI	CAYNNNNRTG	1 cut(s)	416
SmlI	CTYRAG	4 cut(s)	1724, 2033, 2338, 2679
SmoI	CTYRAG	4 cut(s)	1724, 2033, 2338, 2679
SseBI	AGGCCT	1 cut(s)	378
SsiI	CCGC	3 cut(s)	167, 1034, 1737
SspI	AATATT	4 cut(s)	349, 540, 1654, 2752
SspMI	CTAG	5 cut(s)	38, 2348, 2628, 2669, 2730
SstI	GAGCTC	1 cut(s)	678
StuI	AGGCCT	1 cut(s)	378
StyD4I	CCNGG	4 cut(s)	262, 339, 756, 2296
StyI	CCWWGG	2 cut(s)	1921, 2632
TaaI	ACNGT	8 cut(s)	463, 531, 750, 975, 1301, 1574, 2166, 2184
TaiI	ACGT	7 cut(s)	63, 202, 627, 1946, 2020, 2289, 2506
TaqI	TCGA	4 cut(s)	101, 324, 1377, 2608
TatI	WGTACW	3 cut(s)	142, 745, 2334
TfiI	GAWTC	5 cut(s)	1379, 1461, 1598, 1608, 1674
TscAI	CASTG	5 cut(s)	73, 563, 1792, 2169, 2430
TseFI	GTSAC	3 cut(s)	1443, 1856, 2239
Tsp45I	GTSAC	3 cut(s)	1443, 1856, 2239
TspDTI	ATGAA	8 cut(s)	101, 465, 678, 1065, 1140, 1282, 1289, 2798
TspGWI	ACGGA	2 cut(s)	1285, 2707
TspRI	CASTG	5 cut(s)	73, 563, 1792, 2169, 2430
VneI	GTGCAC	1 cut(s)	2663
VspI	ATTAAT	2 cut(s)	611, 1047
XapI	RAATTY	7 cut(s)	14, 1546, 1561, 1900, 2040, 2279, 2363
XceI	RCATGY	3 cut(s)	164, 939, 1444
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2064
XmiI	GTMKAC	1 cut(s)	196
XspI	CTAG	5 cut(s)	38, 2348, 2628, 2669, 2730
ZrmI	AGTACT	1 cut(s)	2336
Zsp2I	ATGCAT	2 cut(s)	898, 1309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.