Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0005192

Physical Location & Seq

Genomic Coordinates Reverse (-)

595420 .. 599117

Gene Structure 3698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015682

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGTGCTCAAGGAGTTCAATTATGTTGATAAAATCTCACACGGCAAGGATGCCTGTCATGAAAGCAGCAGAAGAAGCCTTGCTTATGCTCATGCTTCTGCTATTTGTTTGGTCACTAGCACTGGGTACATTTACCTTTTGTTATGCTGAAGAAGGTCGTCCTAGTGACATCAGTTGCTTGAAATCTATTAAAGAGTCGTTGGAGGACCCTTTGAATTCCCTTGGCAATTGGAACTTTAACAACAGCACAGAAGGTTTTATCTGCGAGTTTAGCGGGGTTGAGTGCTGGCACTTTCCTGAGAACAAAGTCCTCAACCTCAACCTCTCCAGCATGGGGCTTAAGGGCAACTTCCCTCGGGGAATCGCAAACTGCCAAAGCTTAATGCAGTTAAACCTTTCCCATAATCACCTCTCTGGGCCAATCCCATGGGACATATCTGATTTGCTTTACTATGCGACCAGCCTTGATTTCTCCAACAATAACTTTTCTGGTCAAGTCCCAGAGAGCCTAGCCAACTGCAGTTTTCTTAATATACTTGGCCTTGACCACAACCGACTTTCTGGTGCACTACCAACTCAACTAGGCATGCTTTACCGGATCAAGATTTTTAGGGTCAATAATAATCTCTTGTCGGGGCCAATTCCTCCATTTTCCCATAGTTATTATATTACAGCGGAGAGTTTAGCAAATAACAAAGGACTCTGTGGTTTTCCTTTGGAAAGTTGTGATAACAGCAAAAGGATATCAAATGTTCATTCCTGCAAAGTTCCCTTCGGAATTGGTTATGCGCTTTCATTCATAGCCGTGTTTGTCTCATGTTGCGTGCCATGGGTAGAAATTAAGAAGGAGACGAGGTGGATAGTATTCTCTCTACTAGAGAAAAGAAACAAGAGAAAACAAGCTCATCATAATCTGATCAAATTTGGAGCTGAAAAACAGTTTGGCAGGTTTGAAAGTACAATAAATAAAATGAGTTTTACAGAACTGAGTAAAGCAACTGGCAACTTCGGTTTGGACAATGTTATTGGATTTGGAAAAATGGGGACTATGTACAAGGCCAAACTTTCAAATGGTTGGTTTCTTGCAGTTAAGAAGTTGCATCATGACTCTGAACAATCTGAGAAGCAATTCATATCAGAGCTACTGGCTCTGAGCAGATTAAGGCATGTAAACTTGATTCCCCTGCTCGGATTCTGCATACAAAACAATGAGAAGCTTCTTGTGTACAAATACATGTCAAACGGAAACCTCTATAATTGGTTGCACCCAGTGGCAGATGCTAATAAGATTTTGGAATGGCCTTTGAGGGTTAAAATCGCCATTGGGGTTGCAAGAGGCTTGGCGTGTCTCCACCACAACACCAAGTTCCGAATAGTCCACCGCAGCCTAAGCTCAAACTGTATATTGCTTGATCGTTATTTTGAACCCAATATATCCAACTTTGGAGATGCAATCATCTCGAACCGAGGAGGAGTAATGTTTTTGTGCTCAAGTGACAGTGAGTCAGGGCAGTTTGTTAACAGCGGTCTGTGGGAGTCAGATTTTGTGAAGAAGGATGTGTATGACTATGGAGTTGTGCTTGTTGAGCTAATCACAGGAAAGGAGCCGGTAACTACTGGTTCATCAAACAGTCTGCACAAGACTTTGGTTGAATGGATTGATCATGTTTCAACTAGCTCATTCATTTTCAATGACGCCATTGATAAATATCTGATTGGGCAAGGGTTTGATGAGGAGATCATTCAGTTTCTTAAAATTGCATGTGACTGCGTTCAGCCATATCCATTTCAGAGGTCAACAATGCTTGAATTGCCCGAGCCCATTGGCCTCGGCAGAGGCGACGGCGACTTGAACGATGACGCGGAATCGGAGAGTGCCGCCGTTGATTGGATTCAACTGATTGGACTTAGTCGTCGGCTGGGAGGACTCGATCGGAGGACAAGGTATTCGCGTAGTTGTGGCCGCGTCGGCTGGGTGGGAGCTAATCGCCGAGATGATGCCGGGACTGAGCGCCGAGGAGGTTATGAGAGAGTAGTTCATGATGTTGGAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 Pkinase Pkinase_Tyr

Protein Analysis

685

Amino Acids

76.7

Weight (kDa)

7.79

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	54 - 96	1e-06	Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr	PF07714	338 - 548	8.8e-24	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	339 - 603	3.8e-23	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005192)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g34860
rosa_chinensis	RchiOBHm_Chr2g0084611 RchiOBHm_Chr2g0084621 RchiOBHm_Chr2g0084631
rosa_laevigata	RLG00000015682
rosa_multiflora	Rmu_co8126716.1_g000001 Rmu_sc0002352.1_g000013 Rmu_sc0004926.1_g000012 Rmu_sc0034217.1_g000001 Rmu_sc0039558.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155410
rosa_rugosa	Rorug01G0455300 Rorug01G0455400 Rorug01G0460000
rosa_samantha	Rh2AG003100 Rh2AG008000 Rh2AG008100 Rh2BG003100 Rh2BG003300 Rh2BG003400 Rh2BG009100 Rh2CG003500 Rh2CG003700 Rh2CG003800 Rh2CG009800 Rh2CG009900 Rh2DG003600 Rh2DG010200 Rh2DG010300
rosa_wichuraiana	Rw2G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1911
Acc36I	ACCTGC	1 cut(s)	936
AccII	CGCG	3 cut(s)	1862, 1951, 1965
AciI	CCGC	7 cut(s)	273, 674, 1381, 1524, 1862, 1878, 1963
AclWI	GGATC	1 cut(s)	605
AcoI	YGGCCR	1 cut(s)	1960
AcsI	RAATTY	2 cut(s)	214, 920
AcuI	CTGAAG	1 cut(s)	168
AcyI	GRCGYC	1 cut(s)	1695
AdeI	CACNNNGTG	1 cut(s)	1270
AfaI	GTAC	4 cut(s)	127, 958, 1052, 1226
AfiI	CCNNNNNNNGG	3 cut(s)	333, 1187, 1887
AflII	CTTAAG	1 cut(s)	338
AflIII	ACRYGT	1 cut(s)	1233
AhdI	GACNNNNNGTC	1 cut(s)	1501
AjuI	GAANNNNNNNTTGG	2 cut(s)	924, 956
AluBI	AGCT	9 cut(s)	378, 902, 929, 1141, 1216, 1392, 1588, 1677, 1982
AluI	AGCT	9 cut(s)	378, 902, 929, 1141, 1216, 1392, 1588, 1677, 1982
Alw21I	GWGCWC	3 cut(s)	8, 568, 1490
Alw26I	GTCTC	3 cut(s)	817, 842, 1352
Alw44I	GTGCAC	1 cut(s)	564
AlwI	GGATC	1 cut(s)	605
Ama87I	CYCGRG	2 cut(s)	354, 1814
AoxI	GGCC	7 cut(s)	416, 538, 635, 1056, 1298, 1825, 1960
ApaLI	GTGCAC	1 cut(s)	564
ApeKI	GCWGC	2 cut(s)	65, 1383
ApoI	RAATTY	2 cut(s)	214, 920
ArsI	GACNNNNNNTTYG	2 cut(s)	1930, 1962
Asp700I	GAANNNNTTC	1 cut(s)	1127
AspLEI	GCGC	2 cut(s)	790, 2013
AspS9I	GGNCC	3 cut(s)	205, 416, 635
AsuC2I	CCSGG	1 cut(s)	2002
AsuHPI	GGTGA	1 cut(s)	398
AvaI	CYCGRG	2 cut(s)	354, 1814
AvaII	GGWCC	1 cut(s)	205
BaeGI	GKGCMC	1 cut(s)	568
BanII	GRGCYC	1 cut(s)	1821
Bbv12I	GWGCWC	3 cut(s)	8, 568, 1490
BbvI	GCAGC	2 cut(s)	77, 1395
BceAI	ACGGC	4 cut(s)	57, 788, 1858, 1865
BcgI	CGANNNNNNTGC	2 cut(s)	1440, 1474
BclI	TGATCA	2 cut(s)	915, 1660
BcnI	CCSGG	1 cut(s)	2002
BcoDI	GTCTC	3 cut(s)	817, 842, 1352
BfaI	CTAG	6 cut(s)	116, 162, 509, 581, 875, 1674
BfmI	CTRYAG	1 cut(s)	517
BfoI	RGCGCY	1 cut(s)	2014
BfrI	CTTAAG	1 cut(s)	338
BfuAI	ACCTGC	1 cut(s)	936
BglI	GCCNNNNNGGC	1 cut(s)	1968
BisI	GCNGC	4 cut(s)	66, 1384, 1878, 1963
BlsI	GCNGC	4 cut(s)	67, 1385, 1879, 1964
Bme1390I	CCNGG	1 cut(s)	2002
Bme18I	GGWCC	1 cut(s)	205
BmeRI	GACNNNNNGTC	1 cut(s)	1501
BmeT110I	CYCGRG	2 cut(s)	354, 1814
BmgT120I	GGNCC	3 cut(s)	205, 416, 635
BmiI	GGNNCC	3 cut(s)	207, 636, 1605
BmrFI	CCNGG	1 cut(s)	2002
BmrI	ACTGGG	2 cut(s)	131, 1262
BmsI	GCATC	5 cut(s)	39, 1108, 1267, 1438, 1987
BmuI	ACTGGG	2 cut(s)	131, 1262
BpmI	CTGGAG	1 cut(s)	310
Bpu10I	CCTNAGC	1 cut(s)	1388
BpuEI	CTTGAG	1 cut(s)	1474
BpuMI	CCSGG	1 cut(s)	2002
BsaBI	GATNNNNATC	1 cut(s)	1707
BsaHI	GRCGYC	1 cut(s)	1695
BsaJI	CCNNGG	7 cut(s)	220, 353, 425, 827, 1465, 1828, 2014
BsaWI	WCCGGW	1 cut(s)	594
BsaXI	ACNNNNNCTCC	2 cut(s)	839, 869
Bsc4I	CCNNNNNNNGG	3 cut(s)	333, 1187, 1887
Bse118I	RCCGGY	1 cut(s)	1606
Bse1I	ACTGG	5 cut(s)	126, 1003, 1149, 1268, 1621
Bse8I	GATNNNNATC	1 cut(s)	1707
BseDI	CCNNGG	7 cut(s)	220, 353, 425, 827, 1465, 1828, 2014
BseGI	GGATG	2 cut(s)	54, 1561
BseJI	GATNNNNATC	1 cut(s)	1707
BseLI	CCNNNNNNNGG	3 cut(s)	333, 1187, 1887
BseMII	CTCAG	5 cut(s)	288, 977, 1110, 1142, 1998
BseNI	ACTGG	5 cut(s)	126, 1003, 1149, 1268, 1621
BseRI	GAGGAG	4 cut(s)	1482, 1485, 1748, 2031
BseSI	GKGCMC	1 cut(s)	568
BseXI	GCAGC	2 cut(s)	77, 1395
BseYI	CCCAGC	2 cut(s)	1918, 1971
BsgI	GTGCAG	1 cut(s)	1619
Bsh1236I	CGCG	3 cut(s)	1862, 1951, 1965
Bsh1285I	CGRYCG	1 cut(s)	1933
BshFI	GGCC	7 cut(s)	418, 540, 637, 1058, 1300, 1827, 1962
BsiEI	CGRYCG	1 cut(s)	1933
BsiHKAI	GWGCWC	3 cut(s)	8, 568, 1490
BsiHKCI	CYCGRG	2 cut(s)	354, 1814
BsiSI	CCGG	3 cut(s)	595, 1607, 2001
BslFI	GGGAC	4 cut(s)	443, 482, 1057, 2017
BslI	CCNNNNNNNGG	3 cut(s)	333, 1187, 1887
BsmAI	GTCTC	3 cut(s)	817, 842, 1352
BsmBI	CGTCTC	1 cut(s)	842
BsmFI	GGGAC	4 cut(s)	443, 482, 1057, 2017
BsnI	GGCC	7 cut(s)	418, 540, 637, 1058, 1300, 1827, 1962
BsoBI	CYCGRG	2 cut(s)	354, 1814
Bsp1286I	GDGCHC	4 cut(s)	8, 568, 1490, 1821
Bsp1407I	TGTACA	2 cut(s)	1050, 1224
Bsp143I	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
Bsp19I	CCATGG	2 cut(s)	425, 827
BspACI	CCGC	7 cut(s)	273, 674, 1381, 1524, 1862, 1878, 1963
BspANI	GGCC	7 cut(s)	418, 540, 637, 1058, 1300, 1827, 1962
BspCNI	CTCAG	5 cut(s)	289, 978, 1111, 1143, 1999
BspFNI	CGCG	3 cut(s)	1862, 1951, 1965
BspHI	TCATGA	3 cut(s)	57, 1102, 2038
BspLI	GGNNCC	3 cut(s)	207, 636, 1605
BspMAI	CTGCAG	1 cut(s)	521
BspMI	ACCTGC	1 cut(s)	936
BspPI	GGATC	1 cut(s)	605
BspTI	CTTAAG	1 cut(s)	338
BsrFI	RCCGGY	1 cut(s)	1606
BsrGI	TGTACA	2 cut(s)	1050, 1224
BsrI	ACTGG	5 cut(s)	126, 1003, 1149, 1268, 1621
BssAI	RCCGGY	1 cut(s)	1606
BssECI	CCNNGG	7 cut(s)	220, 353, 425, 827, 1465, 1828, 2014
BssMI	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
BssNI	GRCGYC	1 cut(s)	1695
BssT1I	CCWWGG	3 cut(s)	220, 425, 827
Bst4CI	ACNGT	4 cut(s)	939, 1400, 1499, 1631
BstACI	GRCGYC	1 cut(s)	1695
BstAFI	CTTAAG	1 cut(s)	338
BstAUI	TGTACA	2 cut(s)	1050, 1224
BstC8I	GCNNGC	3 cut(s)	287, 587, 824
BstDEI	CTNAG	7 cut(s)	297, 986, 1119, 1151, 1388, 1907, 2007
BstDSI	CCRYGG	2 cut(s)	425, 827
BstF5I	GGATG	2 cut(s)	54, 1561
BstFNI	CGCG	3 cut(s)	1862, 1951, 1965
BstH2I	RGCGCY	1 cut(s)	2014
BstHHI	GCGC	2 cut(s)	790, 2013
BstKTI	GATC	6 cut(s)	600, 918, 1414, 1663, 1740, 1933
BstMAI	GTCTC	3 cut(s)	817, 842, 1352
BstMBI	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
BstMCI	CGRYCG	1 cut(s)	1933
BstMWI	GCNNNNNNNGC	6 cut(s)	74, 270, 1389, 1585, 1810, 1968
BstNSI	RCATGY	4 cut(s)	589, 1169, 1237, 1764
BstSCI	CCNGG	1 cut(s)	2000
BstSFI	CTRYAG	1 cut(s)	517
BstSLI	GKGCMC	1 cut(s)	568
BstUI	CGCG	3 cut(s)	1862, 1951, 1965
BstV1I	GCAGC	2 cut(s)	77, 1395
BstXI	CCANNNNNNTGG	1 cut(s)	426
BsuRI	GGCC	7 cut(s)	418, 540, 637, 1058, 1300, 1827, 1962
BtgI	CCRYGG	2 cut(s)	425, 827
BtsCI	GGATG	2 cut(s)	54, 1561
BtsIMutI	CAGTG	3 cut(s)	119, 1275, 1504
BveI	ACCTGC	1 cut(s)	936
Cac8I	GCNNGC	3 cut(s)	287, 587, 824
CciI	TCATGA	3 cut(s)	57, 1102, 2038
CfoI	GCGC	2 cut(s)	790, 2013
Cfr10I	RCCGGY	1 cut(s)	1606
Cfr13I	GGNCC	3 cut(s)	205, 416, 635
CseI	GACGC	3 cut(s)	1703, 1868, 1954
Csp6I	GTAC	4 cut(s)	126, 957, 1051, 1225
CviQI	GTAC	4 cut(s)	126, 957, 1051, 1225
DdeI	CTNAG	7 cut(s)	297, 986, 1119, 1151, 1388, 1907, 2007
DpnI	GATC	6 cut(s)	599, 917, 1413, 1662, 1739, 1932
DpnII	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
DraIII	CACNNNGTG	1 cut(s)	1270
DrdI	GACNNNNNNGTC	1 cut(s)	1911
DriI	GACNNNNNGTC	1 cut(s)	1501
DseDI	GACNNNNNNGTC	1 cut(s)	1911
EaeI	YGGCCR	1 cut(s)	1960
Eam1105I	GACNNNNNGTC	1 cut(s)	1501
Eco130I	CCWWGG	3 cut(s)	220, 425, 827
Eco24I	GRGCYC	1 cut(s)	1821
Eco32I	GATATC	1 cut(s)	744
Eco47I	GGWCC	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	168
Eco88I	CYCGRG	2 cut(s)	354, 1814
EcoO109I	RGGNCCY	1 cut(s)	205
EcoRI	GAATTC	1 cut(s)	214
EcoRV	GATATC	1 cut(s)	744
EcoT14I	CCWWGG	3 cut(s)	220, 425, 827
EcoT38I	GRGCYC	1 cut(s)	1821
ErhI	CCWWGG	3 cut(s)	220, 425, 827
Esp3I	CGTCTC	1 cut(s)	842
FalI	AAGNNNNNCTT	4 cut(s)	66, 98, 332, 364
FaqI	GGGAC	4 cut(s)	443, 482, 1057, 2017
FauI	CCCGC	1 cut(s)	266
FbaI	TGATCA	2 cut(s)	915, 1660
Fnu4HI	GCNGC	4 cut(s)	66, 1384, 1878, 1963
FokI	GGATG	2 cut(s)	61, 1568
FriOI	GRGCYC	1 cut(s)	1821
Fsp4HI	GCNGC	4 cut(s)	66, 1384, 1878, 1963
FspBI	CTAG	6 cut(s)	116, 162, 509, 581, 875, 1674
GlaI	GCGC	2 cut(s)	789, 2012
GluI	GCNGC	4 cut(s)	66, 1384, 1878, 1963
GsaI	CCCAGC	2 cut(s)	1922, 1975
GsuI	CTGGAG	1 cut(s)	310
HaeII	RGCGCY	1 cut(s)	2014
HaeIII	GGCC	7 cut(s)	418, 540, 637, 1058, 1300, 1827, 1962
HapII	CCGG	3 cut(s)	595, 1607, 2001
HgaI	GACGC	3 cut(s)	1703, 1868, 1954
HhaI	GCGC	2 cut(s)	790, 2013
Hin1I	GRCGYC	1 cut(s)	1695
Hin6I	GCGC	2 cut(s)	788, 2011
HinP1I	GCGC	2 cut(s)	788, 2011
HincII	GTYRAC	2 cut(s)	1519, 1797
HindII	GTYRAC	2 cut(s)	1519, 1797
HindIII	AAGCTT	2 cut(s)	376, 1214
HpaI	GTTAAC	1 cut(s)	1519
HpaII	CCGG	3 cut(s)	595, 1607, 2001
HphI	GGTGA	1 cut(s)	398
Hpy166II	GTNNAC	6 cut(s)	566, 1171, 1225, 1378, 1519, 1797
Hpy188III	TCNNGA	6 cut(s)	58, 296, 601, 1103, 1459, 2039
Hpy8I	GTNNAC	6 cut(s)	566, 1171, 1225, 1378, 1519, 1797
Hpy99I	CGWCG	3 cut(s)	1844, 1917, 1970
HpyAV	CCTTC	5 cut(s)	146, 245, 781, 838, 1546
HpyCH4III	ACNGT	4 cut(s)	939, 1400, 1499, 1631
HpyF10VI	GCNNNNNNNGC	6 cut(s)	74, 270, 1389, 1585, 1810, 1968
HpyF3I	CTNAG	7 cut(s)	297, 986, 1119, 1151, 1388, 1907, 2007
Hsp92I	GRCGYC	1 cut(s)	1695
HspAI	GCGC	2 cut(s)	788, 2011
Ksp22I	TGATCA	2 cut(s)	915, 1660
KspAI	GTTAAC	1 cut(s)	1519
Kzo9I	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
LmnI	GCTCC	3 cut(s)	926, 1603, 1979
Lsp1109I	GCAGC	2 cut(s)	77, 1395
LweI	GCATC	5 cut(s)	39, 1108, 1267, 1438, 1987
MaeI	CTAG	6 cut(s)	116, 162, 509, 581, 875, 1674
MaeIII	GTNAC	5 cut(s)	111, 164, 1493, 1609, 1763
MalI	GATC	6 cut(s)	599, 917, 1413, 1662, 1739, 1932
MboI	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
MboII	GAAGA	3 cut(s)	83, 161, 1561
MfeI	CAATTG	1 cut(s)	226
MhlI	GDGCHC	4 cut(s)	8, 568, 1490, 1821
MlyI	GAGTC	6 cut(s)	203, 693, 1100, 1511, 1544, 1920
MmeI	TCCRAC	4 cut(s)	180, 498, 1461, 2026
MroXI	GAANNNNTTC	1 cut(s)	1127
MslI	CAYNNNNRTG	1 cut(s)	803
MspA1I	CMGCKG	2 cut(s)	674, 1524
MspCI	CTTAAG	1 cut(s)	338
MspI	CCGG	3 cut(s)	595, 1607, 2001
MspR9I	CCNGG	1 cut(s)	2002
MunI	CAATTG	1 cut(s)	226
MvnI	CGCG	3 cut(s)	1862, 1951, 1965
MwoI	GCNNNNNNNGC	6 cut(s)	74, 270, 1389, 1585, 1810, 1968
NciI	CCSGG	1 cut(s)	2002
NcoI	CCATGG	2 cut(s)	425, 827
NdeII	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
NlaIV	GGNNCC	3 cut(s)	207, 636, 1605
NmeAIII	GCCGAG	3 cut(s)	1809, 2015, 2039
NmuCI	GTSAC	4 cut(s)	111, 164, 1493, 1763
NspI	RCATGY	4 cut(s)	589, 1169, 1237, 1764
PaeI	GCATGC	1 cut(s)	589
PagI	TCATGA	3 cut(s)	57, 1102, 2038
PciI	ACATGT	1 cut(s)	1233
PcsI	WCGNNNNNNNCGW	1 cut(s)	1836
PdmI	GAANNNNTTC	1 cut(s)	1127
PfeI	GAWTC	5 cut(s)	360, 1177, 1191, 1865, 1891
PflFI	GACNNNGTC	1 cut(s)	1908
PkrI	GCNGC	4 cut(s)	67, 1385, 1879, 1964
Ple19I	CGATCG	1 cut(s)	1933
PleI	GAGTC	6 cut(s)	202, 693, 1100, 1510, 1543, 1920
PpsI	GAGTC	6 cut(s)	202, 693, 1100, 1510, 1543, 1920
PpuMI	RGGWCCY	1 cut(s)	205
PscI	ACATGT	1 cut(s)	1233
Psp5II	RGGWCCY	1 cut(s)	205
PspFI	CCCAGC	2 cut(s)	1918, 1971
PspN4I	GGNNCC	3 cut(s)	207, 636, 1605
PspPI	GGNCC	3 cut(s)	205, 416, 635
PspPPI	RGGWCCY	1 cut(s)	205
PstI	CTGCAG	1 cut(s)	521
PsyI	GACNNNGTC	1 cut(s)	1908
PvuI	CGATCG	1 cut(s)	1933
RsaI	GTAC	4 cut(s)	127, 958, 1052, 1226
RsaNI	GTAC	4 cut(s)	126, 957, 1051, 1225
RseI	CAYNNNNRTG	1 cut(s)	803
SatI	GCNGC	4 cut(s)	66, 1384, 1878, 1963
Sau3AI	GATC	6 cut(s)	597, 915, 1411, 1660, 1737, 1930
Sau96I	GGNCC	3 cut(s)	205, 416, 635
SchI	GAGTC	6 cut(s)	203, 693, 1100, 1511, 1544, 1920
ScrFI	CCNGG	1 cut(s)	2002
SduI	GDGCHC	4 cut(s)	8, 568, 1490, 1821
SfaNI	GCATC	5 cut(s)	39, 1108, 1267, 1438, 1987
SfcI	CTRYAG	1 cut(s)	517
SinI	GGWCC	1 cut(s)	205
SmiMI	CAYNNNNRTG	1 cut(s)	803
SmlI	CTYRAG	3 cut(s)	7, 338, 1489
SmoI	CTYRAG	3 cut(s)	7, 338, 1489
SphI	GCATGC	1 cut(s)	589
SsiI	CCGC	7 cut(s)	273, 674, 1381, 1524, 1862, 1878, 1963
SspMI	CTAG	6 cut(s)	116, 162, 509, 581, 875, 1674
StyD4I	CCNGG	1 cut(s)	2000
StyI	CCWWGG	3 cut(s)	220, 425, 827
TaaI	ACNGT	4 cut(s)	939, 1400, 1499, 1631
TaqI	TCGA	2 cut(s)	1460, 1929
TatI	WGTACW	3 cut(s)	956, 1050, 1224
TauI	GCSGC	2 cut(s)	1880, 1965
TfiI	GAWTC	5 cut(s)	360, 1177, 1191, 1865, 1891
TscAI	CASTG	3 cut(s)	126, 1275, 1504
TseFI	GTSAC	4 cut(s)	111, 164, 1493, 1763
TseI	GCWGC	2 cut(s)	65, 1383
Tsp45I	GTSAC	4 cut(s)	111, 164, 1493, 1763
TspDTI	ATGAA	8 cut(s)	74, 743, 783, 787, 1120, 1611, 1672, 2027
TspGWI	ACGGA	1 cut(s)	1257
TspRI	CASTG	3 cut(s)	126, 1275, 1504
Tth111I	GACNNNGTC	1 cut(s)	1908
Vha464I	CTTAAG	1 cut(s)	338
VneI	GTGCAC	1 cut(s)	564
VpaK11BI	GGWCC	1 cut(s)	205
XapI	RAATTY	2 cut(s)	214, 920
XceI	RCATGY	4 cut(s)	589, 1169, 1237, 1764
XmnI	GAANNNNTTC	1 cut(s)	1127
XspI	CTAG	6 cut(s)	116, 162, 509, 581, 875, 1674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.