Rh2BG003100
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
301229 .. 301546
318 bp
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UTR
Exon/CDS
Intron
Rh2BG003100.1

Sequence Viewer

Length: 318 bp
ATGCCTGTCATGAAATCAGCAGAAGAAGCCTTGCTTATGCTCATGCTCCTGCTATTTGTTTGGTCACTAGCACTGGGTACATTTACCTTTTGTTATGCTGAAGAAGATCATCCTAGTGACATCCGTTGCTTGAAATCTATTAAAGAGTCGTTGGAGGACCCTTTGAGTTCCCTCGGCGACTGGGACTTTAACAACAGCACACAAGGTTTTATCCGCAAGTTTAGCGGGGTTGAGTGCTGGCACTTCGATGAGAACAAAGCCCTCAACCTCAACCTCTCCAGCATGGGGCTTAAGGCAACTTCCCTCGGGGCATCGTAA

Protein Analysis

105

Amino Acids

11.74

Weight (kDa)

4.69

Isoelectric Point (pI)

44.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 214, 225
AcuI CTGAAG 1 cut(s) 120
AfaI GTAC 1 cut(s) 79
AfiI CCNNNNNNNGG 1 cut(s) 285
AflII CTTAAG 1 cut(s) 290
AgsI TTSAA 1 cut(s) 133
Ama87I CYCGRG 1 cut(s) 305
AspS9I GGNCC 1 cut(s) 157
AvaI CYCGRG 1 cut(s) 305
AvaII GGWCC 1 cut(s) 157
BfaI CTAG 2 cut(s) 68, 114
BfrI CTTAAG 1 cut(s) 290
Bme18I GGWCC 1 cut(s) 157
BmeT110I CYCGRG 1 cut(s) 305
BmgT120I GGNCC 1 cut(s) 157
BmiI GGNNCC 1 cut(s) 159
BmrI ACTGGG 2 cut(s) 83, 190
BmuI ACTGGG 2 cut(s) 83, 190
BpmI CTGGAG 1 cut(s) 262
BsaJI CCNNGG 2 cut(s) 172, 304
Bsc4I CCNNNNNNNGG 1 cut(s) 285
Bse1I ACTGG 2 cut(s) 78, 185
BseDI CCNNGG 2 cut(s) 172, 304
BseGI GGATG 2 cut(s) 109, 120
BseLI CCNNNNNNNGG 1 cut(s) 285
BseNI ACTGG 2 cut(s) 78, 185
BsiHKCI CYCGRG 1 cut(s) 305
BslFI GGGAC 1 cut(s) 197
BslI CCNNNNNNNGG 1 cut(s) 285
BsmFI GGGAC 1 cut(s) 197
BsoBI CYCGRG 1 cut(s) 305
Bsp143I GATC 1 cut(s) 106
BspACI CCGC 2 cut(s) 214, 225
BspHI TCATGA 1 cut(s) 9
BspLI GGNNCC 1 cut(s) 159
BspTI CTTAAG 1 cut(s) 290
BsrI ACTGG 2 cut(s) 78, 185
BssECI CCNNGG 2 cut(s) 172, 304
BssMI GATC 1 cut(s) 106
BstAFI CTTAAG 1 cut(s) 290
BstC8I GCNNGC 1 cut(s) 239
BstF5I GGATG 2 cut(s) 109, 120
BstKTI GATC 1 cut(s) 109
BstMBI GATC 1 cut(s) 106
BstMWI GCNNNNNNNGC 2 cut(s) 26, 222
BtsCI GGATG 2 cut(s) 109, 120
BtsIMutI CAGTG 1 cut(s) 71
Cac8I GCNNGC 1 cut(s) 239
CciI TCATGA 1 cut(s) 9
Cfr13I GGNCC 1 cut(s) 157
Csp6I GTAC 1 cut(s) 78
CviAII CATG 3 cut(s) 10, 43, 283
CviJI RGCY 3 cut(s) 29, 260, 289
CviKI_1 RGCY 3 cut(s) 29, 260, 289
CviQI GTAC 1 cut(s) 78
DpnI GATC 1 cut(s) 108
DpnII GATC 1 cut(s) 106
Eco47I GGWCC 1 cut(s) 157
Eco57I CTGAAG 1 cut(s) 120
Eco88I CYCGRG 1 cut(s) 305
EcoO109I RGGNCCY 1 cut(s) 157
FaeI CATG 3 cut(s) 13, 46, 286
FaiI YATR 5 cut(s) 11, 38, 44, 96, 284
FalI AAGNNNNNCTT 2 cut(s) 18, 50
FaqI GGGAC 1 cut(s) 197
FatI CATG 3 cut(s) 9, 42, 282
FauI CCCGC 1 cut(s) 218
FokI GGATG 2 cut(s) 96, 107
FspBI CTAG 2 cut(s) 68, 114
GsuI CTGGAG 1 cut(s) 262
Hin1II CATG 3 cut(s) 13, 46, 286
HinfI GANTC 1 cut(s) 146
Hpy188III TCNNGA 1 cut(s) 10
HpyF10VI GCNNNNNNNGC 2 cut(s) 26, 222
Hsp92II CATG 3 cut(s) 13, 46, 286
Kzo9I GATC 1 cut(s) 106
LmnI GCTCC 1 cut(s) 51
LpnPI CCDG 6 cut(s) 18, 59, 62, 166, 223, 292
MaeI CTAG 2 cut(s) 68, 114
MaeIII GTNAC 2 cut(s) 63, 116
MalI GATC 1 cut(s) 108
MboI GATC 1 cut(s) 106
MboII GAAGA 3 cut(s) 35, 113, 116
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 132
MnlI CCTC 6 cut(s) 148, 182, 272, 278, 284, 314
MseI TTAA 3 cut(s) 141, 189, 291
MslI CAYNNNNRTG 2 cut(s) 114, 246
MspCI CTTAAG 1 cut(s) 290
MwoI GCNNNNNNNGC 2 cut(s) 26, 222
NdeII GATC 1 cut(s) 106
NlaIII CATG 3 cut(s) 13, 46, 286
NlaIV GGNNCC 1 cut(s) 159
NmeAIII GCCGAG 1 cut(s) 153
NmuCI GTSAC 2 cut(s) 63, 116
PagI TCATGA 1 cut(s) 9
PleI GAGTC 1 cut(s) 154
PpsI GAGTC 1 cut(s) 154
PpuMI RGGWCCY 1 cut(s) 157
Psp5II RGGWCCY 1 cut(s) 157
PspN4I GGNNCC 1 cut(s) 159
PspPI GGNCC 1 cut(s) 157
PspPPI RGGWCCY 1 cut(s) 157
RsaI GTAC 1 cut(s) 79
RsaNI GTAC 1 cut(s) 78
RseI CAYNNNNRTG 2 cut(s) 114, 246
SaqAI TTAA 3 cut(s) 141, 189, 291
Sau3AI GATC 1 cut(s) 106
Sau96I GGNCC 1 cut(s) 157
SchI GAGTC 1 cut(s) 155
SetI ASST 4 cut(s) 89, 208, 270, 276
SinI GGWCC 1 cut(s) 157
SmiMI CAYNNNNRTG 2 cut(s) 114, 246
SmlI CTYRAG 1 cut(s) 290
SmoI CTYRAG 1 cut(s) 290
SsiI CCGC 2 cut(s) 214, 225
SspMI CTAG 2 cut(s) 68, 114
TaqI TCGA 1 cut(s) 246
Tru1I TTAA 3 cut(s) 141, 189, 291
Tru9I TTAA 3 cut(s) 141, 189, 291
TscAI CASTG 1 cut(s) 78
TseFI GTSAC 2 cut(s) 63, 116
Tsp45I GTSAC 2 cut(s) 63, 116
TspDTI ATGAA 1 cut(s) 26
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 1 cut(s) 78
Vha464I CTTAAG 1 cut(s) 290
VpaK11BI GGWCC 1 cut(s) 157
XspI CTAG 2 cut(s) 68, 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.