Rorug01G0455400
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
54988698 .. 54990452
1755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0455400.1

Sequence Viewer

Length: 1392 bp
ATGAGCGGGTCGCTCCCAAAGAGTTTTCGGCAACTATCCCAGCTAACAACCTTGAGTCTAGGCCATAACCGGTTAAGTGGCTCATTCCCAGATGTTACAGGTCTTTCATTCTTATCTCTGTTAAATCTCTCTATCAACCAAATCCATGGAAAGTTTCCGAATCTCCCATCAAGATACTGCGCCTTTCCTTTTATTGACCTGAGTTCCAATCGGTTCTCTGGTACGCTCCCACCATTTCATCCAGCTGTAAGAGCATTGTGGCTCTCCAAAAACAACTTTACAGGGGACCTATCTTCCATATGTTCAACTCCGGCTCCAGATTTGTTTATACTCGACCTTTCTGATAATCTGCTATCAGGGGAGCTCCCTAATTGTTGGGTTCAATTTCAAGGACTGACCGCGTTGAATTTGGCGAACAATAGTTTCTCTGGGAAAATACCAAGCTCATTTGGTTCTTTAAGGTCTCTTTATCAATTACAATTACAACGTAACAATGTTTCAGGTGAACTGCCTTCTCTGGAGAACTGTACGCAGTTGGCTTTTCTTGACCTCGGATTCAATAACTTATCAGGAAAGATACAAGCATGGATAGGCAGCAGCCTTAAAACGTTGTGGGTTCTACAATTAAGGTCAAACCACTTCTCTGGAAGCATTCCCTCAAGTATATGCAGTCTGCCTCTCATTCGTGTTTTGGACCTCTCTCAAAACAATATATCTGGAGTATTGCCACATTGCCTCAACAATTTGACAGCTTTCTCTTCGGTTTCACTGGAGGTGGATGACTTCCCATTTTCTTCTGATTTTGTTTTACAACTTATTTGGAAAGGAACAGAGATGGAGTATGGGAAAAACGTTAGGTATTTGAGGATCATTGACATTTCAAGCAATAAATTAGCTGGGGTGATTCCGGAAAACATAACATATATGCTTGGGTTGCGTTCTCTTAACCTTTCAAGAAACAGTTTGACCGGGGTGATTCCTGGAAAGTTTGGTCAGTTGGAGGTGCTAGAAGCTCTTGATTTGTCAAGAAACCACCTATCCGGTAGTATTCCTGATAGCTTTAGGAACTTGCATTCTATAGCTGTCTTGAATTTATCGATCAACAACTTGTCAGGAAGAATTCCATCCAGCACCCAACTTCTGACTTTTACTGAATCTTCATTCGCTGGAAATGTTGGACTTTGCGGGCCACCGCTAACAACAAAATGCCCGGGAGATAGACCGAGTGAAGATCCAAAAGTCACTGGTGGCACTGAAAGTGATGGTTTCATAACACCAGGGTTTTATGCCGGCATAGGGATTGGATTCTTCACAGGATTTGTGGGAGTCTGCCTTGCTTTACCGCCTGAGACTTCTTGGAGATACGTACAGCAGTTTTTAAGGCAAAGATAA

Protein Analysis

463

Amino Acids

50.45

Weight (kDa)

8.06

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 287 - 346 2.3e-12 Leucine rich repeat
LRR_8 PF13855 312 - 370 1.7e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 6
AccII CGCG 1 cut(s) 401
AccIII TCCGGA 1 cut(s) 907
AciI CCGC 5 cut(s) 6, 399, 1185, 1193, 1343
AclI AACGTT 2 cut(s) 608, 852
AclWI GGATC 2 cut(s) 875, 1226
AcsI RAATTY 3 cut(s) 406, 1090, 1119
AfaI GTAC 3 cut(s) 223, 529, 1368
AfiI CCNNNNNNNGG 1 cut(s) 1296
AgeI ACCGGT 1 cut(s) 69
AgsI TTSAA 8 cut(s) 306, 383, 389, 406, 559, 882, 954, 1090
AjnI CCWGG 2 cut(s) 979, 1276
AluBI AGCT 9 cut(s) 43, 245, 364, 444, 752, 896, 1013, 1059, 1082
AluI AGCT 9 cut(s) 43, 245, 364, 444, 752, 896, 1013, 1059, 1082
Alw21I GWGCWC 1 cut(s) 366
Alw26I GTCTC 2 cut(s) 468, 1343
AlwI GGATC 2 cut(s) 875, 1226
Ama87I CYCGRG 1 cut(s) 1210
Aor13HI TCCGGA 1 cut(s) 907
AoxI GGCC 2 cut(s) 61, 1187
ApeKI GCWGC 2 cut(s) 594, 597
ApoI RAATTY 3 cut(s) 406, 1090, 1119
AsiGI ACCGGT 1 cut(s) 69
AspLEI GCGC 1 cut(s) 182
AspS9I GGNCC 3 cut(s) 286, 694, 1187
AsuC2I CCSGG 3 cut(s) 970, 1211, 1212
AsuHPI GGTGA 3 cut(s) 515, 913, 985
AvaI CYCGRG 1 cut(s) 1210
AvaII GGWCC 2 cut(s) 286, 694
BanII GRGCYC 1 cut(s) 366
Bbv12I GWGCWC 1 cut(s) 366
BbvI GCAGC 2 cut(s) 606, 609
BccI CCATC 4 cut(s) 175, 829, 1132, 1256
BciT130I CCWGG 2 cut(s) 981, 1278
BcnI CCSGG 3 cut(s) 970, 1211, 1212
BcoDI GTCTC 2 cut(s) 468, 1343
BfaI CTAG 2 cut(s) 59, 1007
BfmI CTRYAG 1 cut(s) 1077
BisI GCNGC 2 cut(s) 595, 598
BlsI GCNGC 2 cut(s) 596, 599
Bme1390I CCNGG 5 cut(s) 970, 981, 1211, 1212, 1278
Bme18I GGWCC 2 cut(s) 286, 694
BmeT110I CYCGRG 1 cut(s) 1210
BmgT120I GGNCC 3 cut(s) 286, 694, 1187
BmiI GGNNCC 2 cut(s) 287, 315
BmrFI CCNGG 5 cut(s) 970, 981, 1211, 1212, 1278
BpmI CTGGAG 4 cut(s) 300, 539, 738, 791
BpuEI CTTGAG 2 cut(s) 73, 643
BpuMI CCSGG 3 cut(s) 970, 1211, 1212
Bsa29I ATCGAT 1 cut(s) 1097
BsaAI YACGTR 1 cut(s) 1366
BsaI GGTCTC 1 cut(s) 468
BsaJI CCNNGG 5 cut(s) 145, 550, 969, 1210, 1277
BsaWI WCCGGW 3 cut(s) 69, 907, 1040
BsaXI ACNNNNNCTCC 2 cut(s) 298, 328
Bsc4I CCNNNNNNNGG 1 cut(s) 1296
Bse118I RCCGGY 2 cut(s) 69, 1289
Bse1I ACTGG 2 cut(s) 774, 1249
Bse3DI GCAATG 1 cut(s) 730
BseAI TCCGGA 1 cut(s) 907
BseBI CCWGG 2 cut(s) 981, 1278
BseCI ATCGAT 1 cut(s) 1097
BseDI CCNNGG 5 cut(s) 145, 550, 969, 1210, 1277
BseGI GGATG 3 cut(s) 238, 784, 1124
BseLI CCNNNNNNNGG 1 cut(s) 1296
BseMI GCAATG 1 cut(s) 730
BseMII CTCAG 2 cut(s) 191, 1338
BseNI ACTGG 2 cut(s) 774, 1249
BseXI GCAGC 2 cut(s) 606, 609
BseYI CCCAGC 2 cut(s) 39, 896
Bsh1236I CGCG 1 cut(s) 401
BshFI GGCC 2 cut(s) 63, 1189
BshTI ACCGGT 1 cut(s) 69
BshVI ATCGAT 1 cut(s) 1097
BsiHKAI GWGCWC 1 cut(s) 366
BsiHKCI CYCGRG 1 cut(s) 1210
BsiSI CCGG 7 cut(s) 70, 311, 908, 969, 1041, 1211, 1290
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 1 cut(s) 1296
BsmAI GTCTC 2 cut(s) 468, 1343
BsmFI GGGAC 1 cut(s) 299
BsmI GAATGC 2 cut(s) 651, 1072
BsnI GGCC 2 cut(s) 63, 1189
Bso31I GGTCTC 1 cut(s) 468
BsoBI CYCGRG 1 cut(s) 1210
Bsp1286I GDGCHC 1 cut(s) 366
Bsp13I TCCGGA 1 cut(s) 907
Bsp143I GATC 3 cut(s) 867, 1098, 1231
Bsp19I CCATGG 1 cut(s) 145
BspACI CCGC 5 cut(s) 6, 399, 1185, 1193, 1343
BspANI GGCC 2 cut(s) 63, 1189
BspCNI CTCAG 2 cut(s) 192, 1339
BspDI ATCGAT 1 cut(s) 1097
BspEI TCCGGA 1 cut(s) 907
BspFNI CGCG 1 cut(s) 401
BspLI GGNNCC 2 cut(s) 287, 315
BspPI GGATC 2 cut(s) 875, 1226
BspTNI GGTCTC 1 cut(s) 468
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 1 cut(s) 730
BsrFI RCCGGY 2 cut(s) 69, 1289
BsrI ACTGG 2 cut(s) 774, 1249
BssAI RCCGGY 2 cut(s) 69, 1289
BssECI CCNNGG 5 cut(s) 145, 550, 969, 1210, 1277
BssMI GATC 3 cut(s) 867, 1098, 1231
BssT1I CCWWGG 1 cut(s) 145
Bst2UI CCWGG 2 cut(s) 981, 1278
Bst4CI ACNGT 2 cut(s) 527, 962
Bst6I CTCTTC 1 cut(s) 763
BstBAI YACGTR 1 cut(s) 1366
BstC8I GCNNGC 2 cut(s) 1187, 1291
BstDEI CTNAG 2 cut(s) 200, 1347
BstDSI CCRYGG 1 cut(s) 145
BstF5I GGATG 3 cut(s) 238, 784, 1124
BstFNI CGCG 1 cut(s) 401
BstHHI GCGC 1 cut(s) 182
BstKTI GATC 3 cut(s) 870, 1101, 1234
BstMAI GTCTC 2 cut(s) 468, 1343
BstMBI GATC 3 cut(s) 867, 1098, 1231
BstMWI GCNNNNNNNGC 2 cut(s) 251, 934
BstNI CCWGG 2 cut(s) 981, 1278
BstSCI CCNGG 5 cut(s) 968, 979, 1209, 1210, 1276
BstSFI CTRYAG 1 cut(s) 1077
BstSNI TACGTA 1 cut(s) 1366
BstUI CGCG 1 cut(s) 401
BstV1I GCAGC 2 cut(s) 606, 609
BstX2I RGATCY 1 cut(s) 1231
BstXI CCANNNNNNTGG 2 cut(s) 146, 644
BstYI RGATCY 1 cut(s) 1231
Bsu15I ATCGAT 1 cut(s) 1097
BsuRI GGCC 2 cut(s) 63, 1189
BsuTUI ATCGAT 1 cut(s) 1097
BtgI CCRYGG 1 cut(s) 145
BtsCI GGATG 3 cut(s) 238, 784, 1124
BtsIMutI CAGTG 3 cut(s) 767, 1242, 1251
Cac8I GCNNGC 2 cut(s) 1187, 1291
CfoI GCGC 1 cut(s) 182
Cfr10I RCCGGY 2 cut(s) 69, 1289
Cfr13I GGNCC 3 cut(s) 286, 694, 1187
Cfr9I CCCGGG 1 cut(s) 1210
ClaI ATCGAT 1 cut(s) 1097
Csp6I GTAC 3 cut(s) 222, 528, 1367
CspAI ACCGGT 1 cut(s) 69
CviAII CATG 2 cut(s) 146, 585
CviQI GTAC 3 cut(s) 222, 528, 1367
DdeI CTNAG 2 cut(s) 200, 1347
DpnI GATC 3 cut(s) 869, 1100, 1233
DpnII GATC 3 cut(s) 867, 1098, 1231
Eam1104I CTCTTC 1 cut(s) 763
EarI CTCTTC 1 cut(s) 763
Ecl136II GAGCTC 1 cut(s) 364
Eco105I TACGTA 1 cut(s) 1366
Eco130I CCWWGG 1 cut(s) 145
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 1 cut(s) 468
Eco47I GGWCC 2 cut(s) 286, 694
Eco53kI GAGCTC 1 cut(s) 364
Eco88I CYCGRG 1 cut(s) 1210
EcoICRI GAGCTC 1 cut(s) 364
EcoO109I RGGNCCY 1 cut(s) 286
EcoRI GAATTC 1 cut(s) 1119
EcoRII CCWGG 2 cut(s) 979, 1276
EcoT14I CCWWGG 1 cut(s) 145
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 1 cut(s) 145
FaeI CATG 2 cut(s) 149, 588
FaqI GGGAC 1 cut(s) 299
FatI CATG 2 cut(s) 145, 584
FauI CCCGC 1 cut(s) 1178
FauNDI CATATG 1 cut(s) 299
Fnu4HI GCNGC 2 cut(s) 595, 598
FokI GGATG 3 cut(s) 225, 791, 1111
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 2 cut(s) 595, 598
FspBI CTAG 2 cut(s) 59, 1007
GlaI GCGC 1 cut(s) 181
GluI GCNGC 2 cut(s) 595, 598
GsaI CCCAGC 2 cut(s) 43, 900
GsuI CTGGAG 4 cut(s) 300, 539, 738, 791
HaeIII GGCC 2 cut(s) 63, 1189
HapII CCGG 7 cut(s) 70, 311, 908, 969, 1041, 1211, 1290
HhaI GCGC 1 cut(s) 182
Hin1II CATG 2 cut(s) 149, 588
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HinfI GANTC 8 cut(s) 55, 160, 555, 904, 976, 1154, 1305, 1326
HpaII CCGG 7 cut(s) 70, 311, 908, 969, 1041, 1211, 1290
HphI GGTGA 3 cut(s) 515, 913, 985
Hpy166II GTNNAC 1 cut(s) 506
Hpy188I TCNGA 5 cut(s) 159, 343, 554, 799, 1143
Hpy8I GTNNAC 1 cut(s) 506
HpyAV CCTTC 1 cut(s) 522
HpyCH4III ACNGT 2 cut(s) 527, 962
HpyCH4IV ACGT 4 cut(s) 487, 608, 852, 1365
HpyCH4V TGCA 2 cut(s) 669, 1072
HpyF10VI GCNNNNNNNGC 2 cut(s) 251, 934
HpyF3I CTNAG 2 cut(s) 200, 1347
HpySE526I ACGT 4 cut(s) 487, 608, 852, 1365
Hsp92II CATG 2 cut(s) 149, 588
HspAI GCGC 1 cut(s) 180
Kpn2I TCCGGA 1 cut(s) 907
KroI GCCGGC 1 cut(s) 1289
KroNI GCCGGC 1 cut(s) 1291
Kzo9I GATC 3 cut(s) 867, 1098, 1231
LmnI GCTCC 5 cut(s) 18, 231, 319, 361, 369
Lsp1109I GCAGC 2 cut(s) 606, 609
MaeI CTAG 2 cut(s) 59, 1007
MaeII ACGT 4 cut(s) 487, 608, 852, 1365
MaeIII GTNAC 3 cut(s) 94, 488, 1240
MalI GATC 3 cut(s) 869, 1100, 1233
MbiI CCGCTC 1 cut(s) 6
MboI GATC 3 cut(s) 867, 1098, 1231
MboII GAAGA 7 cut(s) 285, 750, 786, 1128, 1149, 1241, 1300
MflI RGATCY 1 cut(s) 1231
MhlI GDGCHC 1 cut(s) 366
MlyI GAGTC 2 cut(s) 64, 1335
MmeI TCCRAC 2 cut(s) 978, 1156
MnlI CCTC 8 cut(s) 560, 667, 687, 707, 746, 766, 858, 994
MroI TCCGGA 1 cut(s) 907
MroNI GCCGGC 1 cut(s) 1289
MseI TTAA 7 cut(s) 74, 122, 458, 603, 626, 945, 1379
MspA1I CMGCKG 1 cut(s) 245
MspI CCGG 7 cut(s) 70, 311, 908, 969, 1041, 1211, 1290
MspR9I CCNGG 5 cut(s) 970, 981, 1211, 1212, 1278
Mva1269I GAATGC 2 cut(s) 651, 1072
MvaI CCWGG 2 cut(s) 981, 1278
MvnI CGCG 1 cut(s) 401
MwoI GCNNNNNNNGC 2 cut(s) 251, 934
NaeI GCCGGC 1 cut(s) 1291
NciI CCSGG 3 cut(s) 970, 1211, 1212
NcoI CCATGG 1 cut(s) 145
NdeI CATATG 1 cut(s) 299
NdeII GATC 3 cut(s) 867, 1098, 1231
NgoMIV GCCGGC 1 cut(s) 1289
NlaIII CATG 2 cut(s) 149, 588
NlaIV GGNNCC 2 cut(s) 287, 315
NmuCI GTSAC 1 cut(s) 1240
PctI GAATGC 2 cut(s) 651, 1072
PdiI GCCGGC 1 cut(s) 1291
PfeI GAWTC 6 cut(s) 160, 555, 904, 976, 1154, 1305
PfoI TCCNGGA 1 cut(s) 979
PinAI ACCGGT 1 cut(s) 69
PkrI GCNGC 2 cut(s) 596, 599
PleI GAGTC 2 cut(s) 63, 1334
PpsI GAGTC 2 cut(s) 63, 1334
Ppu21I YACGTR 1 cut(s) 1366
PpuMI RGGWCCY 1 cut(s) 286
Psp124BI GAGCTC 1 cut(s) 366
Psp1406I AACGTT 2 cut(s) 608, 852
Psp5II RGGWCCY 1 cut(s) 286
Psp6I CCWGG 2 cut(s) 979, 1276
PspFI CCCAGC 2 cut(s) 39, 896
PspGI CCWGG 2 cut(s) 979, 1276
PspN4I GGNNCC 2 cut(s) 287, 315
PspPI GGNCC 3 cut(s) 286, 694, 1187
PspPPI RGGWCCY 1 cut(s) 286
PsuI RGATCY 1 cut(s) 1231
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 3 cut(s) 223, 529, 1368
RsaNI GTAC 3 cut(s) 222, 528, 1367
SacI GAGCTC 1 cut(s) 366
SaqAI TTAA 7 cut(s) 74, 122, 458, 603, 626, 945, 1379
SatI GCNGC 2 cut(s) 595, 598
Sau3AI GATC 3 cut(s) 867, 1098, 1231
Sau96I GGNCC 3 cut(s) 286, 694, 1187
SchI GAGTC 2 cut(s) 64, 1335
ScrFI CCNGG 5 cut(s) 970, 981, 1211, 1212, 1278
SduI GDGCHC 1 cut(s) 366
SfcI CTRYAG 1 cut(s) 1077
SinI GGWCC 2 cut(s) 286, 694
SmaI CCCGGG 1 cut(s) 1212
SmlI CTYRAG 2 cut(s) 52, 658
SmoI CTYRAG 2 cut(s) 52, 658
SnaBI TACGTA 1 cut(s) 1366
SsiI CCGC 5 cut(s) 6, 399, 1185, 1193, 1343
SspMI CTAG 2 cut(s) 59, 1007
SstI GAGCTC 1 cut(s) 366
StyD4I CCNGG 5 cut(s) 968, 979, 1209, 1210, 1276
StyI CCWWGG 1 cut(s) 145
TaaI ACNGT 2 cut(s) 527, 962
TaiI ACGT 4 cut(s) 490, 611, 855, 1368
TaqI TCGA 2 cut(s) 333, 1097
TaqII GACCGA 1 cut(s) 1237
TfiI GAWTC 6 cut(s) 160, 555, 904, 976, 1154, 1305
Tru1I TTAA 7 cut(s) 74, 122, 458, 603, 626, 945, 1379
Tru9I TTAA 7 cut(s) 74, 122, 458, 603, 626, 945, 1379
TscAI CASTG 3 cut(s) 774, 1249, 1258
TseFI GTSAC 1 cut(s) 1240
TseI GCWGC 2 cut(s) 594, 597
Tsp45I GTSAC 1 cut(s) 1240
TspDTI ATGAA 4 cut(s) 96, 227, 1149, 1258
TspMI CCCGGG 1 cut(s) 1210
TspRI CASTG 3 cut(s) 774, 1249, 1258
VpaK11BI GGWCC 2 cut(s) 286, 694
XapI RAATTY 3 cut(s) 406, 1090, 1119
XmaI CCCGGG 1 cut(s) 1210
XspI CTAG 2 cut(s) 59, 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.