Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005192

Physical Location & Seq

Genomic Coordinates Forward (+)

55363871 .. 55366750

Gene Structure 2880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0460000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGCGCTTCAAATGTCAAGGATACAGAATGGTGATATAGAAGAAAATGGTGGAGAACTAATTCAAAGGGCTAATGGTACTCTTTCAAGTGCAAGTTTAGCATCAGTGGACTCGGCTGTCGATAAGGTCTATAGAGCTATGGGGCCTGCAGGTTTTGAAGGGCTAAAGAGTTTTAGGAAAACCATGAAAATCTATTATGGTGTTTTGTCTATAGGCTTGAGTTCCAATAATAAAATTCTTTACCGCCAGGAATTAATCCAGCACAGGTGGAATAAGATGCTTCTTGTTCTGTGTGTCATCGCTCTCTCACTGGATCCCTTGTTTTGTTATATTCTTGTGGTTAATGATGAGAAGAAGTGCCTTGGATTGGACAGAACATTAGGAGCTATAGCTAGTGTTCTGCGATTTGTCGTGGATTTCTTTTATGTGTTTTATATTATTTATCAATTTCGTGCTAGTGTTGTCACTCTTTGTTCTAAATCATCGAAAGAAGGTGAACTAGTTCCACATACTCGGACAAGAGCATGGAGATATTTGTTGTTGTACTTCATATTCGACATCCTTGTAATTCTTCCACTTCCACAGGTGATAGTTTATGCTATCATTCCAAGATTGAATAACTCGAGACTTTTCCATGCAACACAGTCATTGTACTTCATAGTTATCTTTCAATACGTGCTAAGGGTTCTTCGAATCTGCTCATTGTTAAAAGAAGCCACAAGTTCTTCGGGCATCCTCGCTGAAACTGCATGGGCTAAAGCTGCCTTTAATCTTTTTCTTTATATGCTTGCCAGTCATGTTGTTGGAGCCTTTTGGTATTTCTTTTCAATAGAAAGGAAAACATCTTGCTGGCGAAAATCCTGTAAAATGCATGCTACTGCTCACTGTCCGTTATATTGTGACGATACTTTTGGAGCTAGCACTTTTCTGAATGACTCTTGCTCTTCAAAGACACCAAATTCCACATTTTTTGATTTTGGAATATACTTAGGTGCTCTTGAATCTGGTGTCATCGAATCAACAGATTTCATGACAAAGATCTCTTACTGCTTTTGGTGGGGACTGCAAAACCTGAGTTCCCTGGGTCAAAGCCTCAAAACAAGTACCTATGTCTGGGAAGTCTATTTCTCAGTTTTTGTTTCACTTTCTGGATTGATATTGTTTGCATTTCTTATTGGAAATATGCAGACATATTTACAATCGAAAACAGCAAGGCTGGAGGAAATGAGATTGAAGGGGCAAGAGATGGAGTTGTGGATGGCCTTCCATTCCCTTCCTCGGAAGCTCAAGAAGCGAATATGGCAATACCAGAAATACAAATGGCAAGAAACTAAAGGTGTTGATGTGGAGAATTTTCTTCACAATCTTCCCCGGGACATCAGAAGGGAAACAAAGCAGTATCTATGCTCTGGTCCACTCAGTCAAGTTCCAATGCTTCAAAATATGGATAAACGATTGTTTGATGCAATATGTGATCATCTGAAGCCAGTACTTTACATAGAGCACAGCTTCATACTTCGGAAAGGAGACCCTCTCGATGAGATGTTGTTCATCACTCGTGGCAAAGTATTGACTTACACCACAGAAGGCAATGCAGGCGCTGATTGTCTCGAAAAGGGTGACTTCTATGGCCAAGAACTTCTTGACTGGGTGCTCAAGACTTATCCCAATCCCAGCCTATCCAACCTTCCCTTCTCAACCAAAACAGTCCAAGCGCATACCAAAGTTGAAGTGTTTGCTCTAAGGGCTAATGACTTGAAAAATGTAGTCTCTAAGTTCTGGTGGCTTTTCCCCAGCAAGGGTTTGGACCAATCACGCCAACCAAGGGCAGCTCATGCTTTGCAAGCAGCATGGCGCCGCTATAAACAGCTTCAAAAGACTCCCCGGTCAAAGGAGGGCAGTGTTTCTCGCACTGACCATGCTGTAGTCTCAGAACCCATGATAGCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 Pkinase Pkinase_Tyr

Protein Analysis

650

Amino Acids

74.53

Weight (kDa)

9.26

Isoelectric Point (pI)

39.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	109 - 405	3.5e-16	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005192)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g34860
rosa_chinensis	RchiOBHm_Chr2g0084611 RchiOBHm_Chr2g0084621 RchiOBHm_Chr2g0084631
rosa_laevigata	RLG00000015682
rosa_multiflora	Rmu_co8126716.1_g000001 Rmu_sc0002352.1_g000013 Rmu_sc0004926.1_g000012 Rmu_sc0034217.1_g000001 Rmu_sc0039558.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155410
rosa_rugosa	Rorug01G0455300 Rorug01G0455400 Rorug01G0460000
rosa_samantha	Rh2AG003100 Rh2AG008000 Rh2AG008100 Rh2BG003100 Rh2BG003300 Rh2BG003400 Rh2BG009100 Rh2CG003500 Rh2CG003700 Rh2CG003800 Rh2CG009800 Rh2CG009900 Rh2DG003600 Rh2DG010200 Rh2DG010300
rosa_wichuraiana	Rw2G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	116, 1885
Acc36I	ACCTGC	1 cut(s)	140
AccB1I	GGYRCC	1 cut(s)	1854
AciI	CCGC	2 cut(s)	244, 1858
AclWI	GGATC	2 cut(s)	308, 321
AcoI	YGGCCR	1 cut(s)	1630
AcsI	RAATTY	3 cut(s)	234, 958, 1351
AcuI	CTGAAG	1 cut(s)	1502
AcyI	GRCGYC	1 cut(s)	1855
AfaI	GTAC	5 cut(s)	79, 545, 653, 1105, 1491
AfiI	CCNNNNNNNGG	7 cut(s)	367, 1113, 1278, 1798, 1799, 1825, 1891
AhlI	ACTAGT	1 cut(s)	499
AjnI	CCWGG	2 cut(s)	246, 1080
AjuI	GAANNNNNNNTTGG	2 cut(s)	1676, 1708
AluBI	AGCT	9 cut(s)	137, 386, 392, 761, 917, 1285, 1509, 1832, 1870
AluI	AGCT	9 cut(s)	137, 386, 392, 761, 917, 1285, 1509, 1832, 1870
Alw21I	GWGCWC	3 cut(s)	997, 1506, 1656
Alw26I	GTCTC	5 cut(s)	619, 1521, 1613, 1774, 1933
AlwI	GGATC	2 cut(s)	308, 321
AlwNI	CAGNNNCTG	1 cut(s)	1601
Ama87I	CYCGRG	2 cut(s)	622, 1371
AoxI	GGCC	3 cut(s)	143, 1260, 1630
ApeKI	GCWGC	3 cut(s)	761, 1829, 1847
ApoI	RAATTY	3 cut(s)	234, 958, 1351
ArsI	GACNNNNNNTTYG	2 cut(s)	893, 925
AseI	ATTAAT	1 cut(s)	254
Asp700I	GAANNNNTTC	2 cut(s)	60, 501
AspLEI	GCGC	4 cut(s)	7, 1601, 1717, 1857
AspS9I	GGNCC	3 cut(s)	143, 1412, 1807
AsuC2I	CCSGG	3 cut(s)	1372, 1373, 1885
AsuHPI	GGTGA	4 cut(s)	44, 506, 598, 1631
AsuII	TTCGAA	1 cut(s)	691
AsuNHI	GCTAGC	1 cut(s)	917
AvaI	CYCGRG	2 cut(s)	622, 1371
AvaII	GGWCC	2 cut(s)	1412, 1807
BalI	TGGCCA	1 cut(s)	1632
BamHI	GGATCC	1 cut(s)	313
BanI	GGYRCC	1 cut(s)	1854
BauI	CACGAG	1 cut(s)	1557
Bbv12I	GWGCWC	3 cut(s)	997, 1506, 1656
BbvI	GCAGC	3 cut(s)	748, 1841, 1859
BccI	CCATC	2 cut(s)	1240, 1252
BciT130I	CCWGG	2 cut(s)	248, 1082
BciVI	GTATCC	1 cut(s)	15
BclI	TGATCA	1 cut(s)	1474
BcnI	CCSGG	3 cut(s)	1372, 1373, 1885
BcoDI	GTCTC	5 cut(s)	619, 1521, 1613, 1774, 1933
BcuI	ACTAGT	1 cut(s)	499
BfaI	CTAG	4 cut(s)	393, 456, 500, 918
BfmI	CTRYAG	5 cut(s)	130, 147, 210, 387, 1923
BfoI	RGCGCY	3 cut(s)	8, 1602, 1858
BfuAI	ACCTGC	1 cut(s)	140
BfuI	GTATCC	1 cut(s)	15
BglII	AGATCT	1 cut(s)	1038
BisI	GCNGC	4 cut(s)	762, 1830, 1848, 1858
BlsI	GCNGC	4 cut(s)	763, 1831, 1849, 1859
BmcAI	AGTACT	1 cut(s)	1491
Bme1390I	CCNGG	5 cut(s)	248, 1082, 1372, 1373, 1885
Bme18I	GGWCC	2 cut(s)	1412, 1807
BmeT110I	CYCGRG	2 cut(s)	622, 1371
BmgT120I	GGNCC	3 cut(s)	143, 1412, 1807
BmiI	GGNNCC	4 cut(s)	144, 315, 808, 1856
BmrFI	CCNGG	5 cut(s)	248, 1082, 1372, 1373, 1885
BmrI	ACTGGG	1 cut(s)	1657
BmsI	GCATC	4 cut(s)	110, 267, 741, 1453
BmtI	GCTAGC	1 cut(s)	921
BmuI	ACTGGG	1 cut(s)	1657
BplI	GAGNNNNNCTC	2 cut(s)	1518, 1550
BpmI	CTGGAG	1 cut(s)	1238
Bpu10I	CCTNAGC	1 cut(s)	680
Bpu14I	TTCGAA	1 cut(s)	691
BpuEI	CTTGAG	3 cut(s)	238, 1271, 1640
BpuMI	CCSGG	3 cut(s)	1372, 1373, 1885
BsaAI	YACGTR	1 cut(s)	676
BsaHI	GRCGYC	1 cut(s)	1855
BsaI	GGTCTC	1 cut(s)	1521
BsaJI	CCNNGG	8 cut(s)	361, 1080, 1081, 1277, 1370, 1371, 1823, 1883
Bsc4I	CCNNNNNNNGG	7 cut(s)	367, 1113, 1278, 1798, 1799, 1825, 1891
Bse1I	ACTGG	4 cut(s)	315, 792, 1487, 1652
Bse3DI	GCAATG	1 cut(s)	1597
BseBI	CCWGG	2 cut(s)	248, 1082
BseDI	CCNNGG	8 cut(s)	361, 1080, 1081, 1277, 1370, 1371, 1823, 1883
BseGI	GGATG	3 cut(s)	558, 732, 1263
BseLI	CCNNNNNNNGG	7 cut(s)	367, 1113, 1278, 1798, 1799, 1825, 1891
BseMI	GCAATG	1 cut(s)	1597
BseMII	CTCAG	4 cut(s)	1064, 1143, 1432, 1944
BseNI	ACTGG	4 cut(s)	315, 792, 1487, 1652
BseXI	GCAGC	3 cut(s)	748, 1841, 1859
BseYI	CCCAGC	2 cut(s)	1673, 1793
BshFI	GGCC	3 cut(s)	145, 1262, 1632
BshNI	GGYRCC	1 cut(s)	1854
BsiHKAI	GWGCWC	3 cut(s)	997, 1506, 1656
BsiHKCI	CYCGRG	2 cut(s)	622, 1371
BsiSI	CCGG	2 cut(s)	1372, 1885
BslFI	GGGAC	2 cut(s)	1074, 1388
BslI	CCNNNNNNNGG	7 cut(s)	367, 1113, 1278, 1798, 1799, 1825, 1891
BsmAI	GTCTC	5 cut(s)	619, 1521, 1613, 1774, 1933
BsmFI	GGGAC	2 cut(s)	1074, 1388
BsnI	GGCC	3 cut(s)	145, 1262, 1632
Bso31I	GGTCTC	1 cut(s)	1521
BsoBI	CYCGRG	2 cut(s)	622, 1371
Bsp119I	TTCGAA	1 cut(s)	691
Bsp1286I	GDGCHC	3 cut(s)	997, 1506, 1656
Bsp143I	GATC	3 cut(s)	313, 1038, 1474
BspACI	CCGC	2 cut(s)	244, 1858
BspANI	GGCC	3 cut(s)	145, 1262, 1632
BspCNI	CTCAG	4 cut(s)	1065, 1142, 1431, 1943
BspHI	TCATGA	1 cut(s)	1029
BspLI	GGNNCC	4 cut(s)	144, 315, 808, 1856
BspMAI	CTGCAG	1 cut(s)	151
BspMI	ACCTGC	1 cut(s)	140
BspOI	GCTAGC	1 cut(s)	921
BspPI	GGATC	2 cut(s)	308, 321
BspQI	GCTCTTC	1 cut(s)	949
BspT104I	TTCGAA	1 cut(s)	691
BspT107I	GGYRCC	1 cut(s)	1854
BspTNI	GGTCTC	1 cut(s)	1521
BsrDI	GCAATG	1 cut(s)	1597
BsrI	ACTGG	4 cut(s)	315, 792, 1487, 1652
BssECI	CCNNGG	8 cut(s)	361, 1080, 1081, 1277, 1370, 1371, 1823, 1883
BssMI	GATC	3 cut(s)	313, 1038, 1474
BssNI	GRCGYC	1 cut(s)	1855
BssSI	CACGAG	1 cut(s)	1557
BssT1I	CCWWGG	2 cut(s)	361, 1823
Bst2BI	CACGAG	1 cut(s)	1557
Bst2UI	CCWGG	2 cut(s)	248, 1082
Bst4CI	ACNGT	3 cut(s)	645, 887, 1708
Bst6I	CTCTTC	1 cut(s)	949
BstACI	GRCGYC	1 cut(s)	1855
BstAPI	GCANNNNNTGC	1 cut(s)	1835
BstBAI	YACGTR	1 cut(s)	676
BstBI	TTCGAA	1 cut(s)	691
BstC8I	GCNNGC	7 cut(s)	147, 789, 851, 873, 919, 1597, 1845
BstDEI	CTNAG	8 cut(s)	680, 988, 1073, 1129, 1418, 1742, 1773, 1930
BstF5I	GGATG	3 cut(s)	558, 732, 1263
BstH2I	RGCGCY	3 cut(s)	8, 1602, 1858
BstHHI	GCGC	4 cut(s)	7, 1601, 1717, 1857
BstKTI	GATC	3 cut(s)	316, 1041, 1477
BstMAI	GTCTC	5 cut(s)	619, 1521, 1613, 1774, 1933
BstMBI	GATC	3 cut(s)	313, 1038, 1474
BstMWI	GCNNNNNNNGC	9 cut(s)	98, 746, 761, 1291, 1300, 1596, 1745, 1835, 1844
BstNI	CCWGG	2 cut(s)	248, 1082
BstNSI	RCATGY	1 cut(s)	875
BstSCI	CCNGG	5 cut(s)	246, 1080, 1370, 1371, 1883
BstSFI	CTRYAG	5 cut(s)	130, 147, 210, 387, 1923
BstV1I	GCAGC	3 cut(s)	748, 1841, 1859
BstX2I	RGATCY	2 cut(s)	313, 1038
BstYI	RGATCY	2 cut(s)	313, 1038
BsuI	GTATCC	1 cut(s)	15
BsuRI	GGCC	3 cut(s)	145, 1262, 1632
BtgZI	GCGATG	1 cut(s)	283
BtsCI	GGATG	3 cut(s)	558, 732, 1263
BtsI	GCAGTG	1 cut(s)	1906
BtsIMutI	CAGTG	5 cut(s)	111, 308, 883, 1906, 1911
BveI	ACCTGC	1 cut(s)	140
Cac8I	GCNNGC	7 cut(s)	147, 789, 851, 873, 919, 1597, 1845
CaiI	CAGNNNCTG	1 cut(s)	1601
CciI	TCATGA	1 cut(s)	1029
CfoI	GCGC	4 cut(s)	7, 1601, 1717, 1857
Cfr13I	GGNCC	3 cut(s)	143, 1412, 1807
Cfr9I	CCCGGG	1 cut(s)	1371
Csp6I	GTAC	5 cut(s)	78, 544, 652, 1104, 1490
CspCI	CAANNNNNGTGG	2 cut(s)	952, 987
CviQI	GTAC	5 cut(s)	78, 544, 652, 1104, 1490
DdeI	CTNAG	8 cut(s)	680, 988, 1073, 1129, 1418, 1742, 1773, 1930
DinI	GGCGCC	1 cut(s)	1856
DpnI	GATC	3 cut(s)	315, 1040, 1476
DpnII	GATC	3 cut(s)	313, 1038, 1474
DrdI	GACNNNNNNGTC	2 cut(s)	116, 1885
DseDI	GACNNNNNNGTC	2 cut(s)	116, 1885
EaeI	YGGCCR	1 cut(s)	1630
Eam1104I	CTCTTC	1 cut(s)	949
EarI	CTCTTC	1 cut(s)	949
Eco130I	CCWWGG	2 cut(s)	361, 1823
Eco31I	GGTCTC	1 cut(s)	1521
Eco47I	GGWCC	2 cut(s)	1412, 1807
Eco57I	CTGAAG	1 cut(s)	1502
Eco88I	CYCGRG	2 cut(s)	622, 1371
EcoO109I	RGGNCCY	1 cut(s)	143
EcoRII	CCWGG	2 cut(s)	246, 1080
EcoT14I	CCWWGG	2 cut(s)	361, 1823
EcoT22I	ATGCAT	1 cut(s)	873
EgeI	GGCGCC	1 cut(s)	1856
EheI	GGCGCC	1 cut(s)	1856
ErhI	CCWWGG	2 cut(s)	361, 1823
FalI	AAGNNNNNCTT	4 cut(s)	1607, 1639, 1626, 1658
FaqI	GGGAC	2 cut(s)	1074, 1388
FbaI	TGATCA	1 cut(s)	1474
Fnu4HI	GCNGC	4 cut(s)	762, 1830, 1848, 1858
FokI	GGATG	3 cut(s)	545, 719, 1270
Fsp4HI	GCNGC	4 cut(s)	762, 1830, 1848, 1858
FspBI	CTAG	4 cut(s)	393, 456, 500, 918
GlaI	GCGC	4 cut(s)	6, 1600, 1716, 1856
GluI	GCNGC	4 cut(s)	762, 1830, 1848, 1858
GsaI	CCCAGC	2 cut(s)	1677, 1797
GsuI	CTGGAG	1 cut(s)	1238
HaeII	RGCGCY	3 cut(s)	8, 1602, 1858
HaeIII	GGCC	3 cut(s)	145, 1262, 1632
HapII	CCGG	2 cut(s)	1372, 1885
HhaI	GCGC	4 cut(s)	7, 1601, 1717, 1857
Hin1I	GRCGYC	1 cut(s)	1855
Hin6I	GCGC	4 cut(s)	5, 1599, 1715, 1855
HinP1I	GCGC	4 cut(s)	5, 1599, 1715, 1855
HinfI	GANTC	6 cut(s)	110, 693, 935, 1001, 1016, 1879
HpaII	CCGG	2 cut(s)	1372, 1885
HphI	GGTGA	4 cut(s)	44, 506, 598, 1631
Hpy166II	GTNNAC	3 cut(s)	109, 497, 1415
Hpy188I	TCNGA	7 cut(s)	516, 930, 1281, 1382, 1482, 1521, 1933
Hpy188III	TCNNGA	9 cut(s)	624, 998, 1030, 1149, 1288, 1535, 1610, 1643, 1657
Hpy8I	GTNNAC	3 cut(s)	109, 497, 1415
HpyAV	CCTTC	9 cut(s)	152, 485, 1228, 1273, 1283, 1377, 1580, 1697, 1702
HpyCH4III	ACNGT	3 cut(s)	645, 887, 1708
HpyCH4IV	ACGT	1 cut(s)	675
HpyF10VI	GCNNNNNNNGC	9 cut(s)	98, 746, 761, 1291, 1300, 1596, 1745, 1835, 1844
HpyF3I	CTNAG	8 cut(s)	680, 988, 1073, 1129, 1418, 1742, 1773, 1930
HpySE526I	ACGT	1 cut(s)	675
Hsp92I	GRCGYC	1 cut(s)	1855
HspAI	GCGC	4 cut(s)	5, 1599, 1715, 1855
KasI	GGCGCC	1 cut(s)	1854
Ksp22I	TGATCA	1 cut(s)	1474
Kzo9I	GATC	3 cut(s)	313, 1038, 1474
LguI	GCTCTTC	1 cut(s)	949
LmnI	GCTCC	3 cut(s)	383, 806, 914
Lsp1109I	GCAGC	3 cut(s)	748, 1841, 1859
LweI	GCATC	4 cut(s)	110, 267, 741, 1453
MaeI	CTAG	4 cut(s)	393, 456, 500, 918
MaeII	ACGT	1 cut(s)	675
MaeIII	GTNAC	3 cut(s)	463, 899, 1619
MalI	GATC	3 cut(s)	315, 1040, 1476
MboI	GATC	3 cut(s)	313, 1038, 1474
MboII	GAAGA	8 cut(s)	53, 364, 563, 680, 717, 936, 1349, 1358
MflI	RGATCY	2 cut(s)	313, 1038
MhlI	GDGCHC	3 cut(s)	997, 1506, 1656
MlsI	TGGCCA	1 cut(s)	1632
MluCI	AATT	7 cut(s)	60, 234, 251, 446, 567, 958, 1351
MluNI	TGGCCA	1 cut(s)	1632
Mly113I	GGCGCC	1 cut(s)	1855
MlyI	GAGTC	3 cut(s)	104, 929, 1873
MmeI	TCCRAC	2 cut(s)	784, 1707
MnlI	CCTC	6 cut(s)	746, 1103, 1213, 1287, 1542, 1888
Mox20I	TGGCCA	1 cut(s)	1632
Mph1103I	ATGCAT	1 cut(s)	873
MroXI	GAANNNNTTC	2 cut(s)	60, 501
MscI	TGGCCA	1 cut(s)	1632
MseI	TTAA	4 cut(s)	254, 342, 707, 768
Msp20I	TGGCCA	1 cut(s)	1632
MspI	CCGG	2 cut(s)	1372, 1885
MspR9I	CCNGG	5 cut(s)	248, 1082, 1372, 1373, 1885
MvaI	CCWGG	2 cut(s)	248, 1082
MwoI	GCNNNNNNNGC	9 cut(s)	98, 746, 761, 1291, 1300, 1596, 1745, 1835, 1844
NarI	GGCGCC	1 cut(s)	1855
NciI	CCSGG	3 cut(s)	1372, 1373, 1885
NdeII	GATC	3 cut(s)	313, 1038, 1474
NheI	GCTAGC	1 cut(s)	917
NlaIV	GGNNCC	4 cut(s)	144, 315, 808, 1856
NmeAIII	GCCGAG	1 cut(s)	92
NmuCI	GTSAC	3 cut(s)	463, 899, 1619
NsiI	ATGCAT	1 cut(s)	873
NspI	RCATGY	1 cut(s)	875
NspV	TTCGAA	1 cut(s)	691
PaeI	GCATGC	1 cut(s)	875
PaeR7I	CTCGAG	1 cut(s)	622
PagI	TCATGA	1 cut(s)	1029
PasI	CCCWGGG	1 cut(s)	1081
PciSI	GCTCTTC	1 cut(s)	949
PdmI	GAANNNNTTC	2 cut(s)	60, 501
PfeI	GAWTC	3 cut(s)	693, 1001, 1016
PkrI	GCNGC	4 cut(s)	763, 1831, 1849, 1859
PleI	GAGTC	3 cut(s)	104, 929, 1873
PluTI	GGCGCC	1 cut(s)	1858
PpsI	GAGTC	3 cut(s)	104, 929, 1873
Ppu21I	YACGTR	1 cut(s)	676
PshBI	ATTAAT	1 cut(s)	254
Psp6I	CCWGG	2 cut(s)	246, 1080
PspFI	CCCAGC	2 cut(s)	1673, 1793
PspGI	CCWGG	2 cut(s)	246, 1080
PspN4I	GGNNCC	4 cut(s)	144, 315, 808, 1856
PspPI	GGNCC	3 cut(s)	143, 1412, 1807
PstI	CTGCAG	1 cut(s)	151
PstNI	CAGNNNCTG	1 cut(s)	1601
PsuI	RGATCY	2 cut(s)	313, 1038
RsaI	GTAC	5 cut(s)	79, 545, 653, 1105, 1491
RsaNI	GTAC	5 cut(s)	78, 544, 652, 1104, 1490
SapI	GCTCTTC	1 cut(s)	949
SaqAI	TTAA	4 cut(s)	254, 342, 707, 768
SatI	GCNGC	4 cut(s)	762, 1830, 1848, 1858
Sau3AI	GATC	3 cut(s)	313, 1038, 1474
Sau96I	GGNCC	3 cut(s)	143, 1412, 1807
SbfI	CCTGCAGG	1 cut(s)	151
ScaI	AGTACT	1 cut(s)	1491
SchI	GAGTC	3 cut(s)	104, 929, 1873
ScrFI	CCNGG	5 cut(s)	248, 1082, 1372, 1373, 1885
SdaI	CCTGCAGG	1 cut(s)	151
SduI	GDGCHC	3 cut(s)	997, 1506, 1656
SfaNI	GCATC	4 cut(s)	110, 267, 741, 1453
SfcI	CTRYAG	5 cut(s)	130, 147, 210, 387, 1923
SfoI	GGCGCC	1 cut(s)	1856
Sfr274I	CTCGAG	1 cut(s)	622
SfuI	TTCGAA	1 cut(s)	691
SinI	GGWCC	2 cut(s)	1412, 1807
SlaI	CTCGAG	1 cut(s)	622
SmaI	CCCGGG	1 cut(s)	1373
SmlI	CTYRAG	4 cut(s)	217, 622, 1286, 1655
SmoI	CTYRAG	4 cut(s)	217, 622, 1286, 1655
SpeI	ACTAGT	1 cut(s)	499
SphI	GCATGC	1 cut(s)	875
Sse8387I	CCTGCAGG	1 cut(s)	151
Sse9I	AATT	7 cut(s)	60, 234, 251, 446, 567, 958, 1351
SsiI	CCGC	2 cut(s)	244, 1858
SspDI	GGCGCC	1 cut(s)	1854
SspMI	CTAG	4 cut(s)	393, 456, 500, 918
StyD4I	CCNGG	5 cut(s)	246, 1080, 1370, 1371, 1883
StyI	CCWWGG	2 cut(s)	361, 1823
TaaI	ACNGT	3 cut(s)	645, 887, 1708
TaiI	ACGT	1 cut(s)	678
TaqI	TCGA	9 cut(s)	120, 485, 555, 623, 691, 1014, 1202, 1536, 1611
TasI	AATT	7 cut(s)	60, 234, 251, 446, 567, 958, 1351
TatI	WGTACW	3 cut(s)	543, 651, 1489
TauI	GCSGC	1 cut(s)	1860
TfiI	GAWTC	3 cut(s)	693, 1001, 1016
Tru1I	TTAA	4 cut(s)	254, 342, 707, 768
Tru9I	TTAA	4 cut(s)	254, 342, 707, 768
TscAI	CASTG	5 cut(s)	111, 315, 890, 1906, 1918
TseFI	GTSAC	3 cut(s)	463, 899, 1619
TseI	GCWGC	3 cut(s)	761, 1829, 1847
Tsp45I	GTSAC	3 cut(s)	463, 899, 1619
TspDTI	ATGAA	6 cut(s)	200, 538, 646, 1018, 1501, 1540
TspGWI	ACGGA	1 cut(s)	879
TspMI	CCCGGG	1 cut(s)	1371
TspRI	CASTG	5 cut(s)	111, 315, 890, 1906, 1918
VpaK11BI	GGWCC	2 cut(s)	1412, 1807
VspI	ATTAAT	1 cut(s)	254
XapI	RAATTY	3 cut(s)	234, 958, 1351
XceI	RCATGY	1 cut(s)	875
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1801
XhoI	CTCGAG	1 cut(s)	622
XmaI	CCCGGG	1 cut(s)	1371
XmnI	GAANNNNTTC	2 cut(s)	60, 501
XspI	CTAG	4 cut(s)	393, 456, 500, 918
ZrmI	AGTACT	1 cut(s)	1491
Zsp2I	ATGCAT	1 cut(s)	873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.