Rh2BG009100
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
618597 .. 620714
2118 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG009100.1

Sequence Viewer

Length: 1830 bp
ATGCCTGTCATGAAAGCAGCAGAAGAAGCCTTGCTTATGCTCATGCTTCTGCTATTTGTTTGGTCACTAGCACTGGGTACATTTACCTTTTGTTATGCTGAAGAAGATCATCCTAGTGACATCAGTTGCTTGAAATCTATTAAAGAGTCGTTGGAGGACCCTTTGAATTCCCTTGGCAATTGGAACTTTAACAACAGCACAGAAGGTTTTATCTGCGAGTTTAGCGGGGTTGAGTGCTGGCACTTTCATGAGAACAAAGTCCTCAACCTCAACCTCTCCAGCATGGGGCTTAAGGGCAACTTCCCTCGGGGAATCGCAAACTGCCAAAGCATAGTGCAGTTAAACCTTTCCCACAATCACCTCTCTGGGCCAATCCCATGGGGCATATCTGATTTGCTTTCCTATGTGACCAGCCTTGATCTCTCCAACAATAACTTTTCTGGTCAAGTCCCAGAGAGCCTAGCCAACTGCAGTTTTCTTAATATACTTGGCCTTGACCACAACGGACTTACTGGTGCACTACCAACTCAACTAGGCATGCTTTACCGGATCAAGATTTTTAGGGTCAATAATAATCTCTTGTCGGGGCCAATTCCTCCATTTTCCTATAGTCATTATATTACAAGGGAGAGTTTAGCAAATAACAAAGGACTCTGTGGGTTTCCTTTGGAAAGTTGCGATAACAACAAAAGGATATCATATGTTCATTCCTGCAAAGTTCCCTTCGGAATTGGTTATGCGCTTTCATTCATAGCCGTGTTTGTCTCATGTTGCGTGCCATGGGTAGAAATTAAGATGGAGACGAGGTGGATAGTATTCTCTCTACTAGAGAAGAGAAACAAGAGAAAACAAGCTCATCATAATCTGATCAAATTTGGAGCTGAAAAACAGTTTGGCAGGTTTGAAAGGACAATAAATAAAATGAGTTTTACAGAACTGAGAAAAGCAACTGGCAACTTCGGTTTGGACAATGTTATTGGATTTGGAAAAATGGGGACTATGTACAAGGCCAAACTTTCAAATGGTTGGTTTCTTGCAGTTAAGAAGTTGCATCATGACTCTGAACAATCTGAGAAGCAATTCATATCAGAGCTACTGGCTCTGAGCAGATTGAGGCATGTAAACTTGATTCCCCTGCTCGGATTCTGCATACAAAACAATGAGAAGCTTCTTGTGTACAAATACATGTCAAACGGAAACCTCTATAATTGGTTGCACCCAGTGGCAGATGCTAATAAGATTTTGGAATGGCCTTTGAGGGTTAAAATCGCCATTGGGGTTGCAAGAGGCTTGGCATGTCTCCACCACAACACCAAGTTCCGAATAGTCCACCGCAGCCTAAGCTCAAACTGTATATTGCTTGATCGTTATTTTGAACCCAATATATCCAACTTTGGAGATGCAATCATCTCAAACGGAGGAGGAGTAATGTTTTTGTGCTCAAGTGACAGTGAGTCAGGGCAGTTTGTTAACAGCGGTCTGTGGGAGTCAGATTTTGTGAAGAAGGATGTGTATGACTATGGAGTTGTGCTTGTTGAGCTAATCACAGGAAAGGAGCCCATAACTACCGGTTCATCAAACAGTCTGCACAAGACTTTGGTTGAATGGATTGATCATGTTTCAACTAGCTCATTCATTTTCAATGACGCCATTGATAAATATCTGATTGGGCAAGGGTTTGATGAGGAGATCATTCAGTTTCTTAAAATTGCATCTGACTGCGTTCAGCCATATCCATTTCAGAGGTTAACAATGCTTGAAGTATACAGAAGACTCGGCACAATTGGGCAGAAATATGACATTACATGTGATTCTGGATTTCTGATATAA

Protein Analysis

609

Amino Acids

68.61

Weight (kDa)

7.25

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 80 5.8e-07 Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr PF07714 322 - 532 1e-23 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 323 - 589 9.5e-24 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 888
AccI GTMKAC 1 cut(s) 1764
AciI CCGC 3 cut(s) 225, 1333, 1476
AclWI GGATC 1 cut(s) 557
AcsI RAATTY 2 cut(s) 166, 872
AcuI CTGAAG 1 cut(s) 120
AcyI GRCGYC 1 cut(s) 1647
AdeI CACNNNGTG 1 cut(s) 1222
AfaI GTAC 3 cut(s) 79, 1004, 1178
AfiI CCNNNNNNNGG 2 cut(s) 285, 1139
AflII CTTAAG 1 cut(s) 290
AflIII ACRYGT 2 cut(s) 1185, 1805
AgeI ACCGGT 1 cut(s) 1568
AgsI TTSAA 9 cut(s) 133, 166, 905, 1020, 1376, 1604, 1623, 1642, 1760
AhdI GACNNNNNGTC 1 cut(s) 1453
AjuI GAANNNNNNNTTGG 2 cut(s) 876, 908
AluBI AGCT 7 cut(s) 854, 881, 1093, 1168, 1344, 1540, 1629
AluI AGCT 7 cut(s) 854, 881, 1093, 1168, 1344, 1540, 1629
Alw21I GWGCWC 2 cut(s) 520, 1442
Alw26I GTCTC 3 cut(s) 769, 794, 1304
Alw44I GTGCAC 1 cut(s) 516
AlwI GGATC 1 cut(s) 557
Ama87I CYCGRG 1 cut(s) 306
AoxI GGCC 5 cut(s) 368, 490, 587, 1008, 1250
ApaLI GTGCAC 1 cut(s) 516
ApeKI GCWGC 2 cut(s) 17, 1335
ApoI RAATTY 2 cut(s) 166, 872
AsiGI ACCGGT 1 cut(s) 1568
Asp700I GAANNNNTTC 1 cut(s) 1079
AspLEI GCGC 1 cut(s) 742
AspS9I GGNCC 3 cut(s) 157, 368, 587
AsuHPI GGTGA 1 cut(s) 350
AvaI CYCGRG 1 cut(s) 306
AvaII GGWCC 1 cut(s) 157
BaeGI GKGCMC 1 cut(s) 520
BanII GRGCYC 1 cut(s) 1560
BbsI GAAGAC 1 cut(s) 1777
Bbv12I GWGCWC 2 cut(s) 520, 1442
BbvI GCAGC 2 cut(s) 29, 1347
BccI CCATC 1 cut(s) 790
BceAI ACGGC 1 cut(s) 740
BclI TGATCA 2 cut(s) 867, 1612
BcoDI GTCTC 3 cut(s) 769, 794, 1304
BfaI CTAG 6 cut(s) 68, 114, 461, 533, 827, 1626
BfmI CTRYAG 2 cut(s) 469, 607
BfrI CTTAAG 1 cut(s) 290
BfuAI ACCTGC 1 cut(s) 888
BisI GCNGC 2 cut(s) 18, 1336
BlsI GCNGC 2 cut(s) 19, 1337
Bme18I GGWCC 1 cut(s) 157
BmeRI GACNNNNNGTC 1 cut(s) 1453
BmeT110I CYCGRG 1 cut(s) 306
BmgT120I GGNCC 3 cut(s) 157, 368, 587
BmiI GGNNCC 3 cut(s) 159, 588, 1557
BmrI ACTGGG 2 cut(s) 83, 1214
BmsI GCATC 4 cut(s) 1060, 1219, 1390, 1721
BmuI ACTGGG 2 cut(s) 83, 1214
BpiI GAAGAC 1 cut(s) 1777
BpmI CTGGAG 1 cut(s) 262
Bpu10I CCTNAGC 1 cut(s) 1340
BpuEI CTTGAG 1 cut(s) 1426
BsaBI GATNNNNATC 1 cut(s) 1659
BsaHI GRCGYC 1 cut(s) 1647
BsaJI CCNNGG 4 cut(s) 172, 305, 377, 779
BsaWI WCCGGW 2 cut(s) 546, 1568
BsaXI ACNNNNNCTCC 4 cut(s) 791, 821, 1410, 1440
Bsc4I CCNNNNNNNGG 2 cut(s) 285, 1139
Bse118I RCCGGY 1 cut(s) 1568
Bse1I ACTGG 5 cut(s) 78, 517, 955, 1101, 1220
Bse8I GATNNNNATC 1 cut(s) 1659
BseDI CCNNGG 4 cut(s) 172, 305, 377, 779
BseGI GGATG 2 cut(s) 109, 1513
BseJI GATNNNNATC 1 cut(s) 1659
BseLI CCNNNNNNNGG 2 cut(s) 285, 1139
BseMII CTCAG 3 cut(s) 929, 1062, 1094
BseNI ACTGG 5 cut(s) 78, 517, 955, 1101, 1220
BseRI GAGGAG 3 cut(s) 1434, 1437, 1700
BseSI GKGCMC 1 cut(s) 520
BseXI GCAGC 2 cut(s) 29, 1347
BsgI GTGCAG 2 cut(s) 356, 1571
BshFI GGCC 5 cut(s) 370, 492, 589, 1010, 1252
BshTI ACCGGT 1 cut(s) 1568
BsiHKAI GWGCWC 2 cut(s) 520, 1442
BsiHKCI CYCGRG 1 cut(s) 306
BsiSI CCGG 2 cut(s) 547, 1569
BslFI GGGAC 2 cut(s) 434, 1009
BslI CCNNNNNNNGG 2 cut(s) 285, 1139
BsmAI GTCTC 3 cut(s) 769, 794, 1304
BsmBI CGTCTC 1 cut(s) 794
BsmFI GGGAC 2 cut(s) 434, 1009
BsnI GGCC 5 cut(s) 370, 492, 589, 1010, 1252
BsoBI CYCGRG 1 cut(s) 306
Bsp1286I GDGCHC 3 cut(s) 520, 1442, 1560
Bsp1407I TGTACA 2 cut(s) 1002, 1176
Bsp143I GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
Bsp19I CCATGG 2 cut(s) 377, 779
BspACI CCGC 3 cut(s) 225, 1333, 1476
BspANI GGCC 5 cut(s) 370, 492, 589, 1010, 1252
BspCNI CTCAG 3 cut(s) 930, 1063, 1095
BspHI TCATGA 3 cut(s) 9, 247, 1054
BspLI GGNNCC 3 cut(s) 159, 588, 1557
BspMAI CTGCAG 1 cut(s) 473
BspMI ACCTGC 1 cut(s) 888
BspPI GGATC 1 cut(s) 557
BspTI CTTAAG 1 cut(s) 290
BsrFI RCCGGY 1 cut(s) 1568
BsrGI TGTACA 2 cut(s) 1002, 1176
BsrI ACTGG 5 cut(s) 78, 517, 955, 1101, 1220
BssAI RCCGGY 1 cut(s) 1568
BssECI CCNNGG 4 cut(s) 172, 305, 377, 779
BssMI GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
BssNAI GTATAC 1 cut(s) 1765
BssNI GRCGYC 1 cut(s) 1647
BssT1I CCWWGG 3 cut(s) 172, 377, 779
Bst1107I GTATAC 1 cut(s) 1765
Bst4CI ACNGT 4 cut(s) 891, 1352, 1451, 1583
Bst6I CTCTTC 1 cut(s) 827
BstACI GRCGYC 1 cut(s) 1647
BstAFI CTTAAG 1 cut(s) 290
BstAUI TGTACA 2 cut(s) 1002, 1176
BstC8I GCNNGC 3 cut(s) 239, 539, 776
BstDEI CTNAG 4 cut(s) 938, 1071, 1103, 1340
BstDSI CCRYGG 2 cut(s) 377, 779
BstF5I GGATG 2 cut(s) 109, 1513
BstHHI GCGC 1 cut(s) 742
BstKTI GATC 7 cut(s) 109, 421, 552, 870, 1366, 1615, 1692
BstMAI GTCTC 3 cut(s) 769, 794, 1304
BstMBI GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
BstMWI GCNNNNNNNGC 4 cut(s) 26, 222, 1341, 1537
BstNSI RCATGY 5 cut(s) 541, 1121, 1189, 1299, 1809
BstSFI CTRYAG 2 cut(s) 469, 607
BstSLI GKGCMC 1 cut(s) 520
BstV1I GCAGC 2 cut(s) 29, 1347
BstV2I GAAGAC 1 cut(s) 1777
BstXI CCANNNNNNTGG 1 cut(s) 378
BstZ17I GTATAC 1 cut(s) 1765
BsuRI GGCC 5 cut(s) 370, 492, 589, 1010, 1252
BtgI CCRYGG 2 cut(s) 377, 779
BtsCI GGATG 2 cut(s) 109, 1513
BtsIMutI CAGTG 3 cut(s) 71, 1227, 1456
BveI ACCTGC 1 cut(s) 888
Cac8I GCNNGC 3 cut(s) 239, 539, 776
CciI TCATGA 3 cut(s) 9, 247, 1054
CfoI GCGC 1 cut(s) 742
Cfr10I RCCGGY 1 cut(s) 1568
Cfr13I GGNCC 3 cut(s) 157, 368, 587
CseI GACGC 1 cut(s) 1655
Csp6I GTAC 3 cut(s) 78, 1003, 1177
CspAI ACCGGT 1 cut(s) 1568
CviQI GTAC 3 cut(s) 78, 1003, 1177
DdeI CTNAG 4 cut(s) 938, 1071, 1103, 1340
DpnI GATC 7 cut(s) 108, 420, 551, 869, 1365, 1614, 1691
DpnII GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
DraIII CACNNNGTG 1 cut(s) 1222
DriI GACNNNNNGTC 1 cut(s) 1453
Eam1104I CTCTTC 1 cut(s) 827
Eam1105I GACNNNNNGTC 1 cut(s) 1453
EarI CTCTTC 1 cut(s) 827
Eco130I CCWWGG 3 cut(s) 172, 377, 779
Eco24I GRGCYC 1 cut(s) 1560
Eco32I GATATC 1 cut(s) 696
Eco47I GGWCC 1 cut(s) 157
Eco57I CTGAAG 1 cut(s) 120
Eco88I CYCGRG 1 cut(s) 306
EcoO109I RGGNCCY 1 cut(s) 157
EcoRI GAATTC 1 cut(s) 166
EcoRV GATATC 1 cut(s) 696
EcoT14I CCWWGG 3 cut(s) 172, 377, 779
EcoT38I GRGCYC 1 cut(s) 1560
ErhI CCWWGG 3 cut(s) 172, 377, 779
Esp3I CGTCTC 1 cut(s) 794
FalI AAGNNNNNCTT 4 cut(s) 18, 50, 284, 316
FaqI GGGAC 2 cut(s) 434, 1009
FauI CCCGC 1 cut(s) 218
FauNDI CATATG 1 cut(s) 700
FbaI TGATCA 2 cut(s) 867, 1612
FblI GTMKAC 1 cut(s) 1764
Fnu4HI GCNGC 2 cut(s) 18, 1336
FokI GGATG 2 cut(s) 96, 1520
FriOI GRGCYC 1 cut(s) 1560
Fsp4HI GCNGC 2 cut(s) 18, 1336
FspBI CTAG 6 cut(s) 68, 114, 461, 533, 827, 1626
GlaI GCGC 1 cut(s) 741
GluI GCNGC 2 cut(s) 18, 1336
GsuI CTGGAG 1 cut(s) 262
HaeIII GGCC 5 cut(s) 370, 492, 589, 1010, 1252
HapII CCGG 2 cut(s) 547, 1569
HgaI GACGC 1 cut(s) 1655
HhaI GCGC 1 cut(s) 742
Hin1I GRCGYC 1 cut(s) 1647
Hin6I GCGC 1 cut(s) 740
HinP1I GCGC 1 cut(s) 740
HincII GTYRAC 2 cut(s) 1471, 1749
HindII GTYRAC 2 cut(s) 1471, 1749
HindIII AAGCTT 1 cut(s) 1166
HpaI GTTAAC 2 cut(s) 1471, 1749
HpaII CCGG 2 cut(s) 547, 1569
HphI GGTGA 1 cut(s) 350
Hpy166II GTNNAC 7 cut(s) 518, 1123, 1177, 1330, 1471, 1749, 1765
Hpy188III TCNNGA 5 cut(s) 10, 248, 553, 1055, 1815
Hpy8I GTNNAC 7 cut(s) 518, 1123, 1177, 1330, 1471, 1749, 1765
HpyAV CCTTC 3 cut(s) 197, 733, 1498
HpyCH4III ACNGT 4 cut(s) 891, 1352, 1451, 1583
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 222, 1341, 1537
HpyF3I CTNAG 4 cut(s) 938, 1071, 1103, 1340
Hsp92I GRCGYC 1 cut(s) 1647
HspAI GCGC 1 cut(s) 740
Ksp22I TGATCA 2 cut(s) 867, 1612
KspAI GTTAAC 2 cut(s) 1471, 1749
Kzo9I GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
LmnI GCTCC 2 cut(s) 878, 1555
Lsp1109I GCAGC 2 cut(s) 29, 1347
LweI GCATC 4 cut(s) 1060, 1219, 1390, 1721
MaeI CTAG 6 cut(s) 68, 114, 461, 533, 827, 1626
MaeIII GTNAC 4 cut(s) 63, 116, 406, 1445
MalI GATC 7 cut(s) 108, 420, 551, 869, 1365, 1614, 1691
MboI GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
MboII GAAGA 6 cut(s) 35, 113, 116, 844, 1513, 1782
MfeI CAATTG 2 cut(s) 178, 1782
MhlI GDGCHC 3 cut(s) 520, 1442, 1560
MlyI GAGTC 6 cut(s) 155, 645, 1052, 1463, 1496, 1767
MmeI TCCRAC 3 cut(s) 132, 450, 1413
MroXI GAANNNNTTC 1 cut(s) 1079
MslI CAYNNNNRTG 3 cut(s) 114, 246, 755
MspA1I CMGCKG 1 cut(s) 1476
MspCI CTTAAG 1 cut(s) 290
MspI CCGG 2 cut(s) 547, 1569
MunI CAATTG 2 cut(s) 178, 1782
MwoI GCNNNNNNNGC 4 cut(s) 26, 222, 1341, 1537
NcoI CCATGG 2 cut(s) 377, 779
NdeI CATATG 1 cut(s) 700
NdeII GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
NlaIV GGNNCC 3 cut(s) 159, 588, 1557
NmeAIII GCCGAG 1 cut(s) 1755
NmuCI GTSAC 4 cut(s) 63, 116, 406, 1445
NspI RCATGY 5 cut(s) 541, 1121, 1189, 1299, 1809
PaeI GCATGC 1 cut(s) 541
PagI TCATGA 3 cut(s) 9, 247, 1054
PciI ACATGT 2 cut(s) 1185, 1805
PdmI GAANNNNTTC 1 cut(s) 1079
PfeI GAWTC 4 cut(s) 312, 1129, 1143, 1811
PinAI ACCGGT 1 cut(s) 1568
PkrI GCNGC 2 cut(s) 19, 1337
PleI GAGTC 6 cut(s) 154, 645, 1052, 1462, 1495, 1767
PpsI GAGTC 6 cut(s) 154, 645, 1052, 1462, 1495, 1767
PpuMI RGGWCCY 1 cut(s) 157
PscI ACATGT 2 cut(s) 1185, 1805
Psp5II RGGWCCY 1 cut(s) 157
PspN4I GGNNCC 3 cut(s) 159, 588, 1557
PspPI GGNCC 3 cut(s) 157, 368, 587
PspPPI RGGWCCY 1 cut(s) 157
PstI CTGCAG 1 cut(s) 473
RsaI GTAC 3 cut(s) 79, 1004, 1178
RsaNI GTAC 3 cut(s) 78, 1003, 1177
RseI CAYNNNNRTG 3 cut(s) 114, 246, 755
SatI GCNGC 2 cut(s) 18, 1336
Sau3AI GATC 7 cut(s) 106, 418, 549, 867, 1363, 1612, 1689
Sau96I GGNCC 3 cut(s) 157, 368, 587
SchI GAGTC 6 cut(s) 155, 645, 1052, 1463, 1496, 1767
SduI GDGCHC 3 cut(s) 520, 1442, 1560
SfaNI GCATC 4 cut(s) 1060, 1219, 1390, 1721
SfcI CTRYAG 2 cut(s) 469, 607
SinI GGWCC 1 cut(s) 157
SmiMI CAYNNNNRTG 3 cut(s) 114, 246, 755
SmlI CTYRAG 2 cut(s) 290, 1441
SmoI CTYRAG 2 cut(s) 290, 1441
SphI GCATGC 1 cut(s) 541
SsiI CCGC 3 cut(s) 225, 1333, 1476
SspMI CTAG 6 cut(s) 68, 114, 461, 533, 827, 1626
StyI CCWWGG 3 cut(s) 172, 377, 779
TaaI ACNGT 4 cut(s) 891, 1352, 1451, 1583
TatI WGTACW 2 cut(s) 1002, 1176
TfiI GAWTC 4 cut(s) 312, 1129, 1143, 1811
TscAI CASTG 3 cut(s) 78, 1227, 1456
TseFI GTSAC 4 cut(s) 63, 116, 406, 1445
TseI GCWGC 2 cut(s) 17, 1335
Tsp45I GTSAC 4 cut(s) 63, 116, 406, 1445
TspDTI ATGAA 8 cut(s) 26, 236, 695, 735, 739, 1072, 1563, 1624
TspGWI ACGGA 3 cut(s) 519, 1209, 1431
TspRI CASTG 3 cut(s) 78, 1227, 1456
Vha464I CTTAAG 1 cut(s) 290
VneI GTGCAC 1 cut(s) 516
VpaK11BI GGWCC 1 cut(s) 157
XapI RAATTY 2 cut(s) 166, 872
XceI RCATGY 5 cut(s) 541, 1121, 1189, 1299, 1809
XmiI GTMKAC 1 cut(s) 1764
XmnI GAANNNNTTC 1 cut(s) 1079
XspI CTAG 6 cut(s) 68, 114, 461, 533, 827, 1626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.