Rw2G000790
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
660417 .. 663372
2956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G000790.1

Sequence Viewer

Length: 1878 bp
ATGTGCTCAAGGAGTTCAATTATGTTGATAAAATCTCACTCGGCAAGGATGCCTGTCATGAAAGCAGCAGAAGAAGTCTTGCTTATGCTCATGCTTCTGCTATTTGTTTGGTCACTAGCACTGGGTACATTTACCTTTTGTTATGCTGAAGAAGGTCTTCCTAGTGACATCAGTTGCTTGAAATCTATTAAAGAGTCGTTGGAGGACCCTTTGAATTCCCTTGGCAATTGGAACTTTAACAACAGAACACAAGGTTTTATCTGCGAGTTTAGCGGGGTTGAGTGCTGGCACTTTCATGAGAACAAAGTCCTCAACCTCAACCTCTCCAGCATGGGGCTTAAGGGCAACTTCCCTCGGGGAATCACAAACTGCACAAGCTTAATGCAGTTAAACCTTTCCCACAATCACCTCTCTGGGCCAATCCCATGGGACATATCTCGTTTGCTTTACTTTGCGACCAGCCTTGATCTCTCCAACAATAACTTTTCTGGTCAAGTCCCAGAGAGCCTAGCCAACTGCAGTTTTCTTAATATACTTGGCCTTGATCACAACCGACTTACTGGTGCACTACCAACTCAACTAGGCATGCTAAACCGGATCAAGATATTTAGGGTCAATAATAATCTCTTGTCGGGGCCAATTCCTCCATTTTCCTATAGTAATTATATTACAGGGGAGAGTTTAGCAAATAACAAAGGACTCTGTGGGTTTCCTTTGGAAAGTTGCGATAACAACAAAAGGATATCATATGTTCATTCCTGCAAAGTTCCCTTCGGAATTGGTTATGCGCTTTCATTCATAGCCGTGTTTGTCTCATGTTGCGTGCCATGGGTAGAAATTAAGATGGAGACGAGGTGGATAGTATTCTCTCTACTAGAGAAGATAAACAAGAGAAAACAAGCTCATCATAATCTGATCAAATTTGGAGCTGAAAAACAGTTTGGCAGGTTTGAAAGGACAATAAATAAAATGAGTTTTACAGAACTGAGTAAAGCAACTGGCAACTTCGGTTTGGACAATGTTATTGGATTTGGAAAAATGGGGACTATGTACAAGGCCAAACTTTCAAATGGTTGGTTTCTTGCAGTTAAGAAGTTGCATCATGACTCTGAACAATCTGAGAAGAAATTCATATCAGAGCTACTGGCTCTGAGCAGATTGAGGCATGTAAACTTGATTCCCCTGCTCGGATTCTGCATACAAAACAATGAGAAGCTACTTGTGTACAAATACATGTCAAACGGAAACCTCTATAATTGGTTGCACCCAGTGGCAGATGCTAATAAGATTTTGGAATGGCCTTTGAGGGTTAAAATCGCCATTGGGGTTGCAAGAGGCTTGGCATGTCTCCACCACAACACCAAGTTCCGAATAGTCCACCGCAGCCTAAGCTCAAACTGTATATTGCTTGATCGTTATTTTGAACCCAATATATCCAACTTTGGAGATGCAATCATCTCGAACCGAGGAGGAGTAATGTTTTTGTGCTCAAGTGACAGTGAGTCAGGGCAGTTTGTTAACAGCGGTCTGTGGGAGTCAGATTTTGTGAAGAAGGATGTGTATGACTATGGAGTTGTGCTTGTTGAGCTAATCACAGGAAAGGAGCCTATAACTACTGGTTCATCAAACAGTCTGCACAAGACTTTGGTTGAATGGATTGATCATGTTTCAACTAGCTCATTCATTTTCAATGACGCCATCGATAAATATCTGATTGGGCAAGGGTTTGATGAGGAGATCATTCAGTTTCTTAAAATTGCATCTGACTGCGTTCAGCCATATCCATTTCAGAGGTCAACAATGCTTGAAGTATACAGAAGACTCGGCACAATTGGGCAGAAATATGACATTACATGTGATTCTGGATTTCTGATTTAA

Protein Analysis

625

Amino Acids

70.47

Weight (kDa)

8.51

Isoelectric Point (pI)

40.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 54 - 96 3.9e-06 Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr PF07714 338 - 548 4.8e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 339 - 604 2.2e-23 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 936
AccI GTMKAC 1 cut(s) 1812
AciI CCGC 3 cut(s) 273, 1381, 1524
AclWI GGATC 1 cut(s) 605
AcsI RAATTY 3 cut(s) 214, 920, 1127
AcuI CTGAAG 1 cut(s) 168
AcyI GRCGYC 1 cut(s) 1695
AdeI CACNNNGTG 1 cut(s) 1270
AfaI GTAC 3 cut(s) 127, 1052, 1226
AfiI CCNNNNNNNGG 2 cut(s) 333, 1187
AflII CTTAAG 1 cut(s) 338
AflIII ACRYGT 2 cut(s) 1233, 1853
AhdI GACNNNNNGTC 1 cut(s) 1501
AjuI GAANNNNNNNTTGG 2 cut(s) 924, 956
AluBI AGCT 8 cut(s) 378, 902, 929, 1141, 1216, 1392, 1588, 1677
AluI AGCT 8 cut(s) 378, 902, 929, 1141, 1216, 1392, 1588, 1677
Alw21I GWGCWC 3 cut(s) 8, 568, 1490
Alw26I GTCTC 3 cut(s) 817, 842, 1352
Alw44I GTGCAC 1 cut(s) 564
AlwI GGATC 1 cut(s) 605
Ama87I CYCGRG 1 cut(s) 354
AoxI GGCC 5 cut(s) 416, 538, 635, 1056, 1298
ApaLI GTGCAC 1 cut(s) 564
ApeKI GCWGC 2 cut(s) 65, 1383
ApoI RAATTY 3 cut(s) 214, 920, 1127
Asp700I GAANNNNTTC 2 cut(s) 156, 1127
AspLEI GCGC 1 cut(s) 790
AspS9I GGNCC 3 cut(s) 205, 416, 635
AsuHPI GGTGA 1 cut(s) 398
AvaI CYCGRG 1 cut(s) 354
AvaII GGWCC 1 cut(s) 205
BaeGI GKGCMC 1 cut(s) 568
BbsI GAAGAC 2 cut(s) 149, 1825
Bbv12I GWGCWC 3 cut(s) 8, 568, 1490
BbvI GCAGC 2 cut(s) 77, 1395
BccI CCATC 2 cut(s) 838, 1706
BceAI ACGGC 1 cut(s) 788
BcgI CGANNNNNNTGC 2 cut(s) 1440, 1474
BclI TGATCA 3 cut(s) 544, 915, 1660
BcoDI GTCTC 3 cut(s) 817, 842, 1352
BfaI CTAG 6 cut(s) 116, 162, 509, 581, 875, 1674
BfmI CTRYAG 2 cut(s) 517, 655
BfrI CTTAAG 1 cut(s) 338
BfuAI ACCTGC 1 cut(s) 936
BisI GCNGC 2 cut(s) 66, 1384
BlsI GCNGC 2 cut(s) 67, 1385
Bme18I GGWCC 1 cut(s) 205
BmeRI GACNNNNNGTC 1 cut(s) 1501
BmeT110I CYCGRG 1 cut(s) 354
BmgT120I GGNCC 3 cut(s) 205, 416, 635
BmiI GGNNCC 3 cut(s) 207, 636, 1605
BmrI ACTGGG 2 cut(s) 131, 1262
BmsI GCATC 5 cut(s) 39, 1108, 1267, 1438, 1769
BmuI ACTGGG 2 cut(s) 131, 1262
BpiI GAAGAC 2 cut(s) 149, 1825
BpmI CTGGAG 1 cut(s) 310
Bpu10I CCTNAGC 1 cut(s) 1388
BpuEI CTTGAG 1 cut(s) 1474
Bsa29I ATCGAT 1 cut(s) 1701
BsaBI GATNNNNATC 1 cut(s) 1707
BsaHI GRCGYC 1 cut(s) 1695
BsaJI CCNNGG 5 cut(s) 220, 353, 425, 827, 1465
BsaWI WCCGGW 1 cut(s) 594
BsaXI ACNNNNNCTCC 2 cut(s) 839, 869
Bsc4I CCNNNNNNNGG 2 cut(s) 333, 1187
Bse1I ACTGG 6 cut(s) 126, 565, 1003, 1149, 1268, 1621
Bse8I GATNNNNATC 1 cut(s) 1707
BseCI ATCGAT 1 cut(s) 1701
BseDI CCNNGG 5 cut(s) 220, 353, 425, 827, 1465
BseGI GGATG 2 cut(s) 54, 1561
BseJI GATNNNNATC 1 cut(s) 1707
BseLI CCNNNNNNNGG 2 cut(s) 333, 1187
BseMII CTCAG 3 cut(s) 977, 1110, 1142
BseNI ACTGG 6 cut(s) 126, 565, 1003, 1149, 1268, 1621
BseRI GAGGAG 3 cut(s) 1482, 1485, 1748
BseSI GKGCMC 1 cut(s) 568
BseXI GCAGC 2 cut(s) 77, 1395
BsgI GTGCAG 2 cut(s) 355, 1619
BshFI GGCC 5 cut(s) 418, 540, 637, 1058, 1300
BshVI ATCGAT 1 cut(s) 1701
BsiHKAI GWGCWC 3 cut(s) 8, 568, 1490
BsiHKCI CYCGRG 1 cut(s) 354
BsiSI CCGG 1 cut(s) 595
BslFI GGGAC 3 cut(s) 443, 482, 1057
BslI CCNNNNNNNGG 2 cut(s) 333, 1187
BsmAI GTCTC 3 cut(s) 817, 842, 1352
BsmBI CGTCTC 1 cut(s) 842
BsmFI GGGAC 3 cut(s) 443, 482, 1057
BsnI GGCC 5 cut(s) 418, 540, 637, 1058, 1300
BsoBI CYCGRG 1 cut(s) 354
Bsp1286I GDGCHC 3 cut(s) 8, 568, 1490
Bsp1407I TGTACA 2 cut(s) 1050, 1224
Bsp143I GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
Bsp19I CCATGG 2 cut(s) 425, 827
BspACI CCGC 3 cut(s) 273, 1381, 1524
BspANI GGCC 5 cut(s) 418, 540, 637, 1058, 1300
BspCNI CTCAG 3 cut(s) 978, 1111, 1143
BspDI ATCGAT 1 cut(s) 1701
BspHI TCATGA 3 cut(s) 57, 295, 1102
BspLI GGNNCC 3 cut(s) 207, 636, 1605
BspMAI CTGCAG 1 cut(s) 521
BspMI ACCTGC 1 cut(s) 936
BspPI GGATC 1 cut(s) 605
BspTI CTTAAG 1 cut(s) 338
BsrGI TGTACA 2 cut(s) 1050, 1224
BsrI ACTGG 6 cut(s) 126, 565, 1003, 1149, 1268, 1621
BssECI CCNNGG 5 cut(s) 220, 353, 425, 827, 1465
BssMI GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
BssNAI GTATAC 1 cut(s) 1813
BssNI GRCGYC 1 cut(s) 1695
BssT1I CCWWGG 3 cut(s) 220, 425, 827
Bst1107I GTATAC 1 cut(s) 1813
Bst4CI ACNGT 4 cut(s) 939, 1400, 1499, 1631
BstACI GRCGYC 1 cut(s) 1695
BstAFI CTTAAG 1 cut(s) 338
BstAUI TGTACA 2 cut(s) 1050, 1224
BstC8I GCNNGC 3 cut(s) 287, 587, 824
BstDEI CTNAG 4 cut(s) 986, 1119, 1151, 1388
BstDSI CCRYGG 2 cut(s) 425, 827
BstF5I GGATG 2 cut(s) 54, 1561
BstHHI GCGC 1 cut(s) 790
BstKTI GATC 7 cut(s) 469, 547, 600, 918, 1414, 1663, 1740
BstMAI GTCTC 3 cut(s) 817, 842, 1352
BstMBI GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
BstMWI GCNNNNNNNGC 3 cut(s) 270, 1389, 1585
BstNSI RCATGY 5 cut(s) 589, 1169, 1237, 1347, 1857
BstSFI CTRYAG 2 cut(s) 517, 655
BstSLI GKGCMC 1 cut(s) 568
BstV1I GCAGC 2 cut(s) 77, 1395
BstV2I GAAGAC 2 cut(s) 149, 1825
BstXI CCANNNNNNTGG 1 cut(s) 426
BstZ17I GTATAC 1 cut(s) 1813
Bsu15I ATCGAT 1 cut(s) 1701
BsuRI GGCC 5 cut(s) 418, 540, 637, 1058, 1300
BsuTUI ATCGAT 1 cut(s) 1701
BtgI CCRYGG 2 cut(s) 425, 827
BtsCI GGATG 2 cut(s) 54, 1561
BtsIMutI CAGTG 3 cut(s) 119, 1275, 1504
BveI ACCTGC 1 cut(s) 936
Cac8I GCNNGC 3 cut(s) 287, 587, 824
CciI TCATGA 3 cut(s) 57, 295, 1102
CfoI GCGC 1 cut(s) 790
Cfr13I GGNCC 3 cut(s) 205, 416, 635
ClaI ATCGAT 1 cut(s) 1701
CseI GACGC 1 cut(s) 1703
Csp6I GTAC 3 cut(s) 126, 1051, 1225
CviQI GTAC 3 cut(s) 126, 1051, 1225
DdeI CTNAG 4 cut(s) 986, 1119, 1151, 1388
DpnI GATC 7 cut(s) 468, 546, 599, 917, 1413, 1662, 1739
DpnII GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
DraIII CACNNNGTG 1 cut(s) 1270
DriI GACNNNNNGTC 1 cut(s) 1501
Eam1105I GACNNNNNGTC 1 cut(s) 1501
Eco130I CCWWGG 3 cut(s) 220, 425, 827
Eco32I GATATC 1 cut(s) 744
Eco47I GGWCC 1 cut(s) 205
Eco57I CTGAAG 1 cut(s) 168
Eco88I CYCGRG 1 cut(s) 354
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 214
EcoRV GATATC 1 cut(s) 744
EcoT14I CCWWGG 3 cut(s) 220, 425, 827
ErhI CCWWGG 3 cut(s) 220, 425, 827
Esp3I CGTCTC 1 cut(s) 842
FalI AAGNNNNNCTT 6 cut(s) 66, 98, 141, 173, 332, 364
FaqI GGGAC 3 cut(s) 443, 482, 1057
FauI CCCGC 1 cut(s) 266
FauNDI CATATG 1 cut(s) 748
FbaI TGATCA 3 cut(s) 544, 915, 1660
FblI GTMKAC 1 cut(s) 1812
Fnu4HI GCNGC 2 cut(s) 66, 1384
FokI GGATG 2 cut(s) 61, 1568
Fsp4HI GCNGC 2 cut(s) 66, 1384
FspBI CTAG 6 cut(s) 116, 162, 509, 581, 875, 1674
GlaI GCGC 1 cut(s) 789
GluI GCNGC 2 cut(s) 66, 1384
GsuI CTGGAG 1 cut(s) 310
HaeIII GGCC 5 cut(s) 418, 540, 637, 1058, 1300
HapII CCGG 1 cut(s) 595
HgaI GACGC 1 cut(s) 1703
HhaI GCGC 1 cut(s) 790
Hin1I GRCGYC 1 cut(s) 1695
Hin6I GCGC 1 cut(s) 788
HinP1I GCGC 1 cut(s) 788
HincII GTYRAC 2 cut(s) 1519, 1797
HindII GTYRAC 2 cut(s) 1519, 1797
HindIII AAGCTT 1 cut(s) 376
HpaI GTTAAC 1 cut(s) 1519
HpaII CCGG 1 cut(s) 595
HphI GGTGA 1 cut(s) 398
Hpy166II GTNNAC 7 cut(s) 566, 1171, 1225, 1378, 1519, 1797, 1813
Hpy188III TCNNGA 6 cut(s) 58, 296, 601, 1103, 1459, 1863
Hpy8I GTNNAC 7 cut(s) 566, 1171, 1225, 1378, 1519, 1797, 1813
HpyAV CCTTC 3 cut(s) 146, 781, 1546
HpyCH4III ACNGT 4 cut(s) 939, 1400, 1499, 1631
HpyF10VI GCNNNNNNNGC 3 cut(s) 270, 1389, 1585
HpyF3I CTNAG 4 cut(s) 986, 1119, 1151, 1388
Hsp92I GRCGYC 1 cut(s) 1695
HspAI GCGC 1 cut(s) 788
Ksp22I TGATCA 3 cut(s) 544, 915, 1660
KspAI GTTAAC 1 cut(s) 1519
Kzo9I GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
LmnI GCTCC 2 cut(s) 926, 1603
Lsp1109I GCAGC 2 cut(s) 77, 1395
LweI GCATC 5 cut(s) 39, 1108, 1267, 1438, 1769
MaeI CTAG 6 cut(s) 116, 162, 509, 581, 875, 1674
MaeIII GTNAC 3 cut(s) 111, 164, 1493
MalI GATC 7 cut(s) 468, 546, 599, 917, 1413, 1662, 1739
MboI GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
MboII GAAGA 7 cut(s) 83, 149, 161, 892, 1135, 1561, 1830
MfeI CAATTG 2 cut(s) 226, 1830
MhlI GDGCHC 3 cut(s) 8, 568, 1490
MlyI GAGTC 6 cut(s) 203, 693, 1100, 1511, 1544, 1815
MmeI TCCRAC 3 cut(s) 180, 498, 1461
MroXI GAANNNNTTC 2 cut(s) 156, 1127
MslI CAYNNNNRTG 2 cut(s) 294, 803
MspA1I CMGCKG 1 cut(s) 1524
MspCI CTTAAG 1 cut(s) 338
MspI CCGG 1 cut(s) 595
MunI CAATTG 2 cut(s) 226, 1830
MwoI GCNNNNNNNGC 3 cut(s) 270, 1389, 1585
NcoI CCATGG 2 cut(s) 425, 827
NdeI CATATG 1 cut(s) 748
NdeII GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
NlaIV GGNNCC 3 cut(s) 207, 636, 1605
NmeAIII GCCGAG 2 cut(s) 20, 1803
NmuCI GTSAC 3 cut(s) 111, 164, 1493
NspI RCATGY 5 cut(s) 589, 1169, 1237, 1347, 1857
PaeI GCATGC 1 cut(s) 589
PagI TCATGA 3 cut(s) 57, 295, 1102
PciI ACATGT 2 cut(s) 1233, 1853
PdmI GAANNNNTTC 2 cut(s) 156, 1127
PfeI GAWTC 4 cut(s) 360, 1177, 1191, 1859
PkrI GCNGC 2 cut(s) 67, 1385
PleI GAGTC 6 cut(s) 202, 693, 1100, 1510, 1543, 1815
PpsI GAGTC 6 cut(s) 202, 693, 1100, 1510, 1543, 1815
PpuMI RGGWCCY 1 cut(s) 205
PscI ACATGT 2 cut(s) 1233, 1853
Psp5II RGGWCCY 1 cut(s) 205
PspN4I GGNNCC 3 cut(s) 207, 636, 1605
PspPI GGNCC 3 cut(s) 205, 416, 635
PspPPI RGGWCCY 1 cut(s) 205
PstI CTGCAG 1 cut(s) 521
RsaI GTAC 3 cut(s) 127, 1052, 1226
RsaNI GTAC 3 cut(s) 126, 1051, 1225
RseI CAYNNNNRTG 2 cut(s) 294, 803
SatI GCNGC 2 cut(s) 66, 1384
Sau3AI GATC 7 cut(s) 466, 544, 597, 915, 1411, 1660, 1737
Sau96I GGNCC 3 cut(s) 205, 416, 635
SchI GAGTC 6 cut(s) 203, 693, 1100, 1511, 1544, 1815
SduI GDGCHC 3 cut(s) 8, 568, 1490
SfaNI GCATC 5 cut(s) 39, 1108, 1267, 1438, 1769
SfcI CTRYAG 2 cut(s) 517, 655
SinI GGWCC 1 cut(s) 205
SmiMI CAYNNNNRTG 2 cut(s) 294, 803
SmlI CTYRAG 3 cut(s) 7, 338, 1489
SmoI CTYRAG 3 cut(s) 7, 338, 1489
SphI GCATGC 1 cut(s) 589
SsiI CCGC 3 cut(s) 273, 1381, 1524
SspMI CTAG 6 cut(s) 116, 162, 509, 581, 875, 1674
StyI CCWWGG 3 cut(s) 220, 425, 827
TaaI ACNGT 4 cut(s) 939, 1400, 1499, 1631
TaqI TCGA 2 cut(s) 1460, 1701
TatI WGTACW 2 cut(s) 1050, 1224
TfiI GAWTC 4 cut(s) 360, 1177, 1191, 1859
TscAI CASTG 3 cut(s) 126, 1275, 1504
TseFI GTSAC 3 cut(s) 111, 164, 1493
TseI GCWGC 2 cut(s) 65, 1383
Tsp45I GTSAC 3 cut(s) 111, 164, 1493
TspDTI ATGAA 8 cut(s) 74, 284, 743, 783, 787, 1120, 1611, 1672
TspGWI ACGGA 1 cut(s) 1257
TspRI CASTG 3 cut(s) 126, 1275, 1504
Vha464I CTTAAG 1 cut(s) 338
VneI GTGCAC 1 cut(s) 564
VpaK11BI GGWCC 1 cut(s) 205
XapI RAATTY 3 cut(s) 214, 920, 1127
XceI RCATGY 5 cut(s) 589, 1169, 1237, 1347, 1857
XmiI GTMKAC 1 cut(s) 1812
XmnI GAANNNNTTC 2 cut(s) 156, 1127
XspI CTAG 6 cut(s) 116, 162, 509, 581, 875, 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.