RLG00000016926

Protein FMP32, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0002615
Physical Location & Seq
Forward (+)
11265015 .. 11269363
4349 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016926

Sequence Viewer

Length: 1083 bp
ATGACATCGAAACTTCATTCTTATCAGCAGTATCTGCTTGATCATAGATGTAAGACAGGTGTTGACAATGGTCATTTGGCTACTAGGGTTCTGAAGAAACCGATATTGGAGAAGAGCAGCCTGGTGGAGTTGGCGGGTGAAGTTGGCATGGCTATCGAGCCGCTAGCAACGTTAGGGGAAAGTGGATCGTCGACTTCTCAGGAACCGAACTGGGATGCCATAGTATTCTCAGATGAGGAGATCAAGTATGCAATTTATGATCTGAAGCCCAAATCACTGCACTGCGTCGTCTTCGGGCACCATCTCTCTTCGTTTTGGCCAACGTACTTTTCCGGAACATTTGGAGTCAGCGGCGGAAACCAAGTTGAAATCGGAATGGCCGCTGCTGCGGCGTGTAAACGGGTCGCCCAATCCGGGAGGATCGGGTTGTCCGGGTTCGGAGCTCTCGGCGGTTCCAAACCGATTTCTCCGAGTTTGCCGCACAGGCATTTGGATTGCAGGCTCATTTCCTCCGAGCTTGTCAAATCTAGTAATGGAAAGCGCCTTTTTCTTGTTGACACATTAGCTTTGGTTAGGAGATTAGAGGGCCAAGGGGTGCCCTCCAAGCACGCCGAGGCCATAACAGCTGCCATTACTGAAGTTTTGAATGACAGCTTGGAGAATGTGTCTCAGTCGTTTGTTTCCAAGGCAGAGCAGCAGAAAAATGAGATGATCCAAGACTCAAACTTGTCCAAATTCAAATCCGAAGTTCAAAGTTCACAGGGACACCACTTTTCTTTGTTGCAACACGAGACTGAAAAACTTCGGAATGATATAGAGAAGATGCGCAATGAATTGAGGTATGAAATCGACAAAGTTACTGCAGGGCAAAGGTTGGACTTGAATCTTGAAAGGGGGAGGATACGGGAAGAGCTAGCAAATCAGAATGCTGAAACCAATAACCTTACTAACAAACTTGATCGGGAAATTCATGCTTTGCGAGCACAAGTGGAAGCCGCAAAATATGATGTCATAAAATACTGCATAGGTACACTCGTCTCCATATCTGCTGTTGGTCTTGCTGTACTACGTATCTTGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1640

Protein Analysis

361

Amino Acids

39.66

Weight (kDa)

7.22

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CCDC90-like PF07798 185 - 358 5.4e-61 Coiled-coil domain-containing protein 90-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 827
AccB1I GGYRCC 2 cut(s) 297, 595
AccI GTMKAC 1 cut(s) 191
AccIII TCCGGA 1 cut(s) 332
AciI CCGC 9 cut(s) 134, 161, 351, 354, 381, 389, 450, 479, 996
AclI AACGTT 1 cut(s) 170
AclWI GGATC 3 cut(s) 193, 428, 706
AcoI YGGCCR 2 cut(s) 317, 378
AcsI RAATTY 2 cut(s) 734, 966
AcuI CTGAAG 3 cut(s) 113, 284, 657
AfaI GTAC 3 cut(s) 326, 1030, 1065
AfiI CCNNNNNNNGG 1 cut(s) 414
AgsI TTSAA 6 cut(s) 368, 646, 739, 752, 883, 890
AjnI CCWGG 1 cut(s) 120
AjuI GAANNNNNNNTTGG 6 cut(s) 89, 121, 313, 345, 638, 670
AluBI AGCT 6 cut(s) 443, 517, 566, 626, 654, 913
AluI AGCT 6 cut(s) 443, 517, 566, 626, 654, 913
Alw21I GWGCWC 2 cut(s) 445, 985
Alw26I GTCTC 3 cut(s) 672, 785, 1042
AlwI GGATC 3 cut(s) 193, 428, 706
AlwNI CAGNNNCTG 1 cut(s) 34
Aor13HI TCCGGA 1 cut(s) 332
AoxI GGCC 4 cut(s) 317, 378, 586, 615
ApeKI GCWGC 5 cut(s) 117, 383, 386, 626, 694
ApoI RAATTY 2 cut(s) 734, 966
Asp700I GAANNNNTTC 1 cut(s) 801
AspLEI GCGC 2 cut(s) 543, 828
AspS9I GGNCC 1 cut(s) 586
AsuC2I CCSGG 2 cut(s) 415, 433
AsuHPI GGTGA 1 cut(s) 149
AsuNHI GCTAGC 2 cut(s) 163, 913
BaeGI GKGCMC 2 cut(s) 300, 600
BaeI ACNNNNGTAYC 2 cut(s) 1020, 1053
BalI TGGCCA 1 cut(s) 319
BanI GGYRCC 2 cut(s) 297, 595
BanII GRGCYC 1 cut(s) 445
BauI CACGAG 1 cut(s) 788
BbsI GAAGAC 1 cut(s) 283
Bbv12I GWGCWC 2 cut(s) 445, 985
BbvI GCAGC 5 cut(s) 129, 370, 373, 613, 706
BccI CCATC 1 cut(s) 309
BcgI CGANNNNNNTGC 2 cut(s) 136, 170
BciT130I CCWGG 1 cut(s) 122
BciVI GTATCC 1 cut(s) 894
BclI TGATCA 1 cut(s) 40
BcnI CCSGG 2 cut(s) 415, 433
BcoDI GTCTC 3 cut(s) 672, 785, 1042
BfaI CTAG 4 cut(s) 84, 164, 528, 914
BfmI CTRYAG 1 cut(s) 861
BfoI RGCGCY 1 cut(s) 544
BfuI GTATCC 1 cut(s) 894
BglI GCCNNNNNGGC 1 cut(s) 484
Bme1390I CCNGG 3 cut(s) 122, 415, 433
BmgT120I GGNCC 1 cut(s) 586
BmiI GGNNCC 4 cut(s) 204, 299, 454, 597
BmrFI CCNGG 3 cut(s) 122, 415, 433
BmrI ACTGGG 1 cut(s) 220
BmsI GCATC 2 cut(s) 205, 813
BmtI GCTAGC 2 cut(s) 167, 917
BmuI ACTGGG 1 cut(s) 220
BoxI GACNNNNGTC 1 cut(s) 69
BpiI GAAGAC 1 cut(s) 283
BpuMI CCSGG 2 cut(s) 415, 433
BsaAI YACGTR 1 cut(s) 1070
BsaJI CCNNGG 3 cut(s) 589, 612, 684
BsaWI WCCGGW 1 cut(s) 332
BsaXI ACNNNNNCTCC 4 cut(s) 230, 260, 650, 680
Bsc4I CCNNNNNNNGG 1 cut(s) 414
Bse1I ACTGG 1 cut(s) 215
Bse3DI GCAATG 1 cut(s) 835
BseAI TCCGGA 1 cut(s) 332
BseBI CCWGG 1 cut(s) 122
BseDI CCNNGG 3 cut(s) 589, 612, 684
BseGI GGATG 1 cut(s) 220
BseLI CCNNNNNNNGG 1 cut(s) 414
BseMI GCAATG 1 cut(s) 835
BseMII CTCAG 3 cut(s) 212, 243, 683
BseNI ACTGG 1 cut(s) 215
BseRI GAGGAG 1 cut(s) 251
BseSI GKGCMC 2 cut(s) 300, 600
BseXI GCAGC 5 cut(s) 129, 370, 373, 613, 706
BsgI GTGCAG 1 cut(s) 263
BshFI GGCC 4 cut(s) 319, 380, 588, 617
BshNI GGYRCC 2 cut(s) 297, 595
BsiHKAI GWGCWC 2 cut(s) 445, 985
BsiSI CCGG 3 cut(s) 333, 414, 432
BslFI GGGAC 1 cut(s) 777
BslI CCNNNNNNNGG 1 cut(s) 414
BsmAI GTCTC 3 cut(s) 672, 785, 1042
BsmBI CGTCTC 1 cut(s) 1042
BsmFI GGGAC 1 cut(s) 777
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 4 cut(s) 319, 380, 588, 617
Bsp1286I GDGCHC 4 cut(s) 300, 445, 600, 985
Bsp13I TCCGGA 1 cut(s) 332
Bsp143I GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
BspACI CCGC 9 cut(s) 134, 161, 351, 354, 381, 389, 450, 479, 996
BspANI GGCC 4 cut(s) 319, 380, 588, 617
BspCNI CTCAG 3 cut(s) 211, 242, 682
BspEI TCCGGA 1 cut(s) 332
BspLI GGNNCC 4 cut(s) 204, 299, 454, 597
BspMAI CTGCAG 1 cut(s) 865
BspOI GCTAGC 2 cut(s) 167, 917
BspPI GGATC 3 cut(s) 193, 428, 706
BspQI GCTCTTC 2 cut(s) 107, 903
BspT107I GGYRCC 2 cut(s) 297, 595
BsrDI GCAATG 1 cut(s) 835
BsrI ACTGG 1 cut(s) 215
BssECI CCNNGG 3 cut(s) 589, 612, 684
BssMI GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
BssSI CACGAG 1 cut(s) 788
BssT1I CCWWGG 2 cut(s) 589, 684
Bst2BI CACGAG 1 cut(s) 788
Bst2UI CCWGG 1 cut(s) 122
Bst6I CTCTTC 3 cut(s) 107, 313, 903
BstAPI GCANNNNNTGC 1 cut(s) 34
BstBAI YACGTR 1 cut(s) 1070
BstC8I GCNNGC 5 cut(s) 165, 500, 609, 915, 981
BstDEI CTNAG 3 cut(s) 198, 229, 669
BstF5I GGATG 1 cut(s) 220
BstH2I RGCGCY 1 cut(s) 544
BstHHI GCGC 2 cut(s) 543, 828
BstKTI GATC 7 cut(s) 43, 188, 243, 262, 423, 714, 961
BstMAI GTCTC 3 cut(s) 672, 785, 1042
BstMBI GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
BstMWI GCNNNNNNNGC 7 cut(s) 34, 386, 389, 484, 604, 623, 980
BstNI CCWGG 1 cut(s) 122
BstPAI GACNNNNGTC 1 cut(s) 69
BstSCI CCNGG 3 cut(s) 120, 413, 431
BstSFI CTRYAG 1 cut(s) 861
BstSLI GKGCMC 2 cut(s) 300, 600
BstSNI TACGTA 1 cut(s) 1070
BstV1I GCAGC 5 cut(s) 129, 370, 373, 613, 706
BstV2I GAAGAC 1 cut(s) 283
BsuI GTATCC 1 cut(s) 894
BsuRI GGCC 4 cut(s) 319, 380, 588, 617
BtsCI GGATG 1 cut(s) 220
BtsI GCAGTG 2 cut(s) 275, 280
BtsIMutI CAGTG 2 cut(s) 275, 280
Cac8I GCNNGC 5 cut(s) 165, 500, 609, 915, 981
CaiI CAGNNNCTG 1 cut(s) 34
CfoI GCGC 2 cut(s) 543, 828
Cfr13I GGNCC 1 cut(s) 586
CseI GACGC 1 cut(s) 274
Csp6I GTAC 3 cut(s) 325, 1029, 1064
CviAII CATG 2 cut(s) 148, 971
CviQI GTAC 3 cut(s) 325, 1029, 1064
DdeI CTNAG 3 cut(s) 198, 229, 669
DpnI GATC 7 cut(s) 42, 187, 242, 261, 422, 713, 960
DpnII GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
EaeI YGGCCR 2 cut(s) 317, 378
Eam1104I CTCTTC 3 cut(s) 107, 313, 903
EarI CTCTTC 3 cut(s) 107, 313, 903
EciI GGCGGA 1 cut(s) 369
Ecl136II GAGCTC 1 cut(s) 443
Eco105I TACGTA 1 cut(s) 1070
Eco130I CCWWGG 2 cut(s) 589, 684
Eco24I GRGCYC 1 cut(s) 445
Eco53kI GAGCTC 1 cut(s) 443
Eco57I CTGAAG 3 cut(s) 113, 284, 657
EcoICRI GAGCTC 1 cut(s) 443
EcoRII CCWGG 1 cut(s) 120
EcoT14I CCWWGG 2 cut(s) 589, 684
EcoT38I GRGCYC 1 cut(s) 445
ErhI CCWWGG 2 cut(s) 589, 684
Esp3I CGTCTC 1 cut(s) 1042
FaeI CATG 2 cut(s) 151, 974
FaqI GGGAC 1 cut(s) 777
FatI CATG 2 cut(s) 147, 970
FauI CCCGC 1 cut(s) 127
FbaI TGATCA 1 cut(s) 40
FblI GTMKAC 1 cut(s) 191
FokI GGATG 1 cut(s) 227
FriOI GRGCYC 1 cut(s) 445
FspBI CTAG 4 cut(s) 84, 164, 528, 914
FspI TGCGCA 1 cut(s) 827
GlaI GCGC 2 cut(s) 542, 827
HaeII RGCGCY 1 cut(s) 544
HaeIII GGCC 4 cut(s) 319, 380, 588, 617
HapII CCGG 3 cut(s) 333, 414, 432
HgaI GACGC 1 cut(s) 274
HhaI GCGC 2 cut(s) 543, 828
Hin1II CATG 2 cut(s) 151, 974
Hin6I GCGC 2 cut(s) 541, 826
HinP1I GCGC 2 cut(s) 541, 826
HincII GTYRAC 3 cut(s) 64, 192, 556
HindII GTYRAC 3 cut(s) 64, 192, 556
HinfI GANTC 3 cut(s) 345, 719, 883
HpaII CCGG 3 cut(s) 333, 414, 432
HphI GGTGA 1 cut(s) 149
Hpy166II GTNNAC 6 cut(s) 64, 192, 398, 556, 758, 1031
Hpy188III TCNNGA 5 cut(s) 200, 333, 887, 962, 1075
Hpy8I GTNNAC 6 cut(s) 64, 192, 398, 556, 758, 1031
Hpy99I CGWCG 2 cut(s) 193, 290
HpyCH4IV ACGT 3 cut(s) 170, 323, 1069
HpyCH4V TGCA 6 cut(s) 251, 280, 498, 784, 863, 1023
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 386, 389, 484, 604, 623, 980
HpyF3I CTNAG 3 cut(s) 198, 229, 669
HpySE526I ACGT 3 cut(s) 170, 323, 1069
Hsp92II CATG 2 cut(s) 151, 974
HspAI GCGC 2 cut(s) 541, 826
Kpn2I TCCGGA 1 cut(s) 332
Ksp22I TGATCA 1 cut(s) 40
Kzo9I GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
LguI GCTCTTC 2 cut(s) 107, 903
LmnI GCTCC 1 cut(s) 440
Lsp1109I GCAGC 5 cut(s) 129, 370, 373, 613, 706
LweI GCATC 2 cut(s) 205, 813
MaeI CTAG 4 cut(s) 84, 164, 528, 914
MaeII ACGT 3 cut(s) 170, 323, 1069
MaeIII GTNAC 1 cut(s) 856
MalI GATC 7 cut(s) 42, 187, 242, 261, 422, 713, 960
MboI GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
MboII GAAGA 6 cut(s) 106, 124, 283, 300, 832, 920
MhlI GDGCHC 4 cut(s) 300, 445, 600, 985
MlsI TGGCCA 1 cut(s) 319
MluCI AATT 4 cut(s) 252, 734, 833, 966
MluNI TGGCCA 1 cut(s) 319
MlyI GAGTC 2 cut(s) 354, 713
MmeI TCCRAC 1 cut(s) 855
MnlI CCTC 8 cut(s) 229, 411, 520, 577, 607, 610, 831, 891
Mox20I TGGCCA 1 cut(s) 319
MroI TCCGGA 1 cut(s) 332
MroXI GAANNNNTTC 1 cut(s) 801
MscI TGGCCA 1 cut(s) 319
Msp20I TGGCCA 1 cut(s) 319
MspA1I CMGCKG 3 cut(s) 351, 383, 626
MspI CCGG 3 cut(s) 333, 414, 432
MspR9I CCNGG 3 cut(s) 122, 415, 433
Mva1269I GAATGC 1 cut(s) 931
MvaI CCWGG 1 cut(s) 122
MwoI GCNNNNNNNGC 7 cut(s) 34, 386, 389, 484, 604, 623, 980
NciI CCSGG 2 cut(s) 415, 433
NdeII GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
NheI GCTAGC 2 cut(s) 163, 913
NlaIII CATG 2 cut(s) 151, 974
NlaIV GGNNCC 4 cut(s) 204, 299, 454, 597
NmeAIII GCCGAG 2 cut(s) 426, 637
NsbI TGCGCA 1 cut(s) 827
PciSI GCTCTTC 2 cut(s) 107, 903
PctI GAATGC 1 cut(s) 931
PdmI GAANNNNTTC 1 cut(s) 801
PfeI GAWTC 1 cut(s) 883
PfoI TCCNGGA 1 cut(s) 413
PleI GAGTC 2 cut(s) 353, 713
PpsI GAGTC 2 cut(s) 353, 713
Ppu21I YACGTR 1 cut(s) 1070
PshAI GACNNNNGTC 1 cut(s) 69
Psp124BI GAGCTC 1 cut(s) 445
Psp1406I AACGTT 1 cut(s) 170
Psp6I CCWGG 1 cut(s) 120
PspGI CCWGG 1 cut(s) 120
PspN4I GGNNCC 4 cut(s) 204, 299, 454, 597
PspPI GGNCC 1 cut(s) 586
PstI CTGCAG 1 cut(s) 865
PstNI CAGNNNCTG 1 cut(s) 34
PvuII CAGCTG 1 cut(s) 626
RsaI GTAC 3 cut(s) 326, 1030, 1065
RsaNI GTAC 3 cut(s) 325, 1029, 1064
SacI GAGCTC 1 cut(s) 445
SalI GTCGAC 1 cut(s) 190
SapI GCTCTTC 2 cut(s) 107, 903
Sau3AI GATC 7 cut(s) 40, 185, 240, 259, 420, 711, 958
Sau96I GGNCC 1 cut(s) 586
SchI GAGTC 2 cut(s) 354, 713
ScrFI CCNGG 3 cut(s) 122, 415, 433
SduI GDGCHC 4 cut(s) 300, 445, 600, 985
SfaNI GCATC 2 cut(s) 205, 813
SfcI CTRYAG 1 cut(s) 861
SnaBI TACGTA 1 cut(s) 1070
Sse9I AATT 4 cut(s) 252, 734, 833, 966
SsiI CCGC 9 cut(s) 134, 161, 351, 354, 381, 389, 450, 479, 996
SspMI CTAG 4 cut(s) 84, 164, 528, 914
SstI GAGCTC 1 cut(s) 445
StyD4I CCNGG 3 cut(s) 120, 413, 431
StyI CCWWGG 2 cut(s) 589, 684
TaiI ACGT 3 cut(s) 173, 326, 1072
TaqI TCGA 4 cut(s) 8, 156, 191, 849
TasI AATT 4 cut(s) 252, 734, 833, 966
TatI WGTACW 1 cut(s) 1063
TauI GCSGC 6 cut(s) 163, 354, 383, 392, 481, 998
TfiI GAWTC 1 cut(s) 883
TscAI CASTG 2 cut(s) 282, 287
TseI GCWGC 5 cut(s) 117, 383, 386, 626, 694
TspDTI ATGAA 4 cut(s) 5, 846, 858, 959
TspRI CASTG 2 cut(s) 282, 287
XapI RAATTY 2 cut(s) 734, 966
XmiI GTMKAC 1 cut(s) 191
XmnI GAANNNNTTC 1 cut(s) 801
XspI CTAG 4 cut(s) 84, 164, 528, 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.