Rmu_co8441933.1_g000001

Protein FMP32, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8441933.1
OG0002615
Physical Location & Seq
Forward (+)
1 .. 809
809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8441933.1_g000001.1.cds

Sequence Viewer

Length: 321 bp
ggacaccacttttctttgttgcaacacgagactgaaaaacttcggaatgatatagagaagatgcgcaatgaattgaggtatgaaatcgacaaagttactgcagggcaaaggttggacttgaatcttgaaagggggaggatacgggaagagctagcaaatcagaatgctgaaaccaataaccttactaacaaacttgatcgggaaattcatgctttgcgtgcacaagtggaagccgcaaaatatgacgtcataaaatactgcataggtacacttgtctccatatctgctgttggtcttgctgtactacgtatcttgatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1640

Protein Analysis

106

Amino Acids

12.21

Weight (kDa)

7.1

Isoelectric Point (pI)

30.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 249
Acc16I TGCGCA 1 cut(s) 65
AciI CCGC 1 cut(s) 234
AcsI RAATTY 1 cut(s) 204
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 2 cut(s) 268, 303
AgsI TTSAA 2 cut(s) 121, 128
AluBI AGCT 1 cut(s) 151
AluI AGCT 1 cut(s) 151
Alw21I GWGCWC 1 cut(s) 223
Alw26I GTCTC 2 cut(s) 23, 280
Alw44I GTGCAC 1 cut(s) 219
ApaLI GTGCAC 1 cut(s) 219
ApoI RAATTY 1 cut(s) 204
Asp700I GAANNNNTTC 1 cut(s) 39
AspLEI GCGC 1 cut(s) 66
AsuNHI GCTAGC 1 cut(s) 151
BaeGI GKGCMC 1 cut(s) 223
BaeI ACNNNNGTAYC 2 cut(s) 258, 291
BauI CACGAG 1 cut(s) 26
Bbv12I GWGCWC 1 cut(s) 223
BciVI GTATCC 1 cut(s) 132
BcoDI GTCTC 2 cut(s) 23, 280
BfaI CTAG 1 cut(s) 152
BfmI CTRYAG 1 cut(s) 99
BfuI GTATCC 1 cut(s) 132
BisI GCNGC 1 cut(s) 234
BlsI GCNGC 1 cut(s) 235
BmsI GCATC 1 cut(s) 51
BmtI GCTAGC 1 cut(s) 155
BsaAI YACGTR 1 cut(s) 308
BsaHI GRCGYC 1 cut(s) 246
Bse3DI GCAATG 1 cut(s) 73
BseMI GCAATG 1 cut(s) 73
BseSI GKGCMC 1 cut(s) 223
BsiHKAI GWGCWC 1 cut(s) 223
BsmAI GTCTC 2 cut(s) 23, 280
BsmI GAATGC 1 cut(s) 169
Bsp1286I GDGCHC 1 cut(s) 223
Bsp143I GATC 1 cut(s) 196
BspACI CCGC 1 cut(s) 234
BspMAI CTGCAG 1 cut(s) 103
BspOI GCTAGC 1 cut(s) 155
BspQI GCTCTTC 1 cut(s) 141
BsrDI GCAATG 1 cut(s) 73
BssMI GATC 1 cut(s) 196
BssNI GRCGYC 1 cut(s) 246
BssSI CACGAG 1 cut(s) 26
Bst2BI CACGAG 1 cut(s) 26
Bst6I CTCTTC 1 cut(s) 141
BstACI GRCGYC 1 cut(s) 246
BstBAI YACGTR 1 cut(s) 308
BstC8I GCNNGC 2 cut(s) 153, 219
BstHHI GCGC 1 cut(s) 66
BstKTI GATC 1 cut(s) 199
BstMAI GTCTC 2 cut(s) 23, 280
BstMBI GATC 1 cut(s) 196
BstMWI GCNNNNNNNGC 1 cut(s) 218
BstSFI CTRYAG 1 cut(s) 99
BstSLI GKGCMC 1 cut(s) 223
BstSNI TACGTA 1 cut(s) 308
BsuI GTATCC 1 cut(s) 132
Cac8I GCNNGC 2 cut(s) 153, 219
CfoI GCGC 1 cut(s) 66
Csp6I GTAC 2 cut(s) 267, 302
CviAII CATG 1 cut(s) 209
CviJI RGCY 2 cut(s) 151, 233
CviKI_1 RGCY 2 cut(s) 151, 233
CviQI GTAC 2 cut(s) 267, 302
DpnI GATC 1 cut(s) 198
DpnII GATC 1 cut(s) 196
Eam1104I CTCTTC 1 cut(s) 141
EarI CTCTTC 1 cut(s) 141
Eco105I TACGTA 1 cut(s) 308
FaeI CATG 1 cut(s) 212
FaiI YATR 7 cut(s) 53, 81, 210, 243, 251, 263, 281
FatI CATG 1 cut(s) 208
Fnu4HI GCNGC 1 cut(s) 234
Fsp4HI GCNGC 1 cut(s) 234
FspBI CTAG 1 cut(s) 152
FspI TGCGCA 1 cut(s) 65
GlaI GCGC 1 cut(s) 65
GluI GCNGC 1 cut(s) 234
HhaI GCGC 1 cut(s) 66
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 1 cut(s) 212
Hin6I GCGC 1 cut(s) 64
HinP1I GCGC 1 cut(s) 64
HinfI GANTC 1 cut(s) 121
Hpy166II GTNNAC 2 cut(s) 221, 269
Hpy188I TCNGA 2 cut(s) 45, 162
Hpy188III TCNNGA 3 cut(s) 125, 200, 313
Hpy8I GTNNAC 2 cut(s) 221, 269
HpyCH4IV ACGT 2 cut(s) 246, 307
HpyCH4V TGCA 4 cut(s) 22, 101, 221, 261
HpyF10VI GCNNNNNNNGC 1 cut(s) 218
HpySE526I ACGT 2 cut(s) 246, 307
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 1 cut(s) 212
HspAI GCGC 1 cut(s) 64
Kzo9I GATC 1 cut(s) 196
LguI GCTCTTC 1 cut(s) 141
LpnPI CCDG 1 cut(s) 87
LweI GCATC 1 cut(s) 51
MaeI CTAG 1 cut(s) 152
MaeII ACGT 2 cut(s) 246, 307
MaeIII GTNAC 1 cut(s) 94
MalI GATC 1 cut(s) 198
MboI GATC 1 cut(s) 196
MboII GAAGA 2 cut(s) 70, 158
MhlI GDGCHC 1 cut(s) 223
MluCI AATT 2 cut(s) 71, 204
MmeI TCCRAC 1 cut(s) 93
MnlI CCTC 2 cut(s) 69, 129
MroXI GAANNNNTTC 1 cut(s) 39
Mva1269I GAATGC 1 cut(s) 169
MwoI GCNNNNNNNGC 1 cut(s) 218
NdeII GATC 1 cut(s) 196
NheI GCTAGC 1 cut(s) 151
NlaIII CATG 1 cut(s) 212
NsbI TGCGCA 1 cut(s) 65
PciSI GCTCTTC 1 cut(s) 141
PctI GAATGC 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 1 cut(s) 121
PkrI GCNGC 1 cut(s) 235
Ppu21I YACGTR 1 cut(s) 308
PstI CTGCAG 1 cut(s) 103
RsaI GTAC 2 cut(s) 268, 303
RsaNI GTAC 2 cut(s) 267, 302
SapI GCTCTTC 1 cut(s) 141
SatI GCNGC 1 cut(s) 234
Sau3AI GATC 1 cut(s) 196
SduI GDGCHC 1 cut(s) 223
SetI ASST 7 cut(s) 80, 113, 153, 183, 249, 268, 310
SfaNI GCATC 1 cut(s) 51
SfcI CTRYAG 1 cut(s) 99
SnaBI TACGTA 1 cut(s) 308
Sse9I AATT 2 cut(s) 71, 204
SsiI CCGC 1 cut(s) 234
SspMI CTAG 1 cut(s) 152
TaiI ACGT 2 cut(s) 249, 310
TaqI TCGA 1 cut(s) 87
TasI AATT 2 cut(s) 71, 204
TatI WGTACW 1 cut(s) 301
TauI GCSGC 1 cut(s) 236
TfiI GAWTC 1 cut(s) 121
TspDTI ATGAA 3 cut(s) 84, 96, 197
VneI GTGCAC 1 cut(s) 219
XapI RAATTY 1 cut(s) 204
XmnI GAANNNNTTC 1 cut(s) 39
XspI CTAG 1 cut(s) 152
ZraI GACGTC 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.