Rh2CG138500

Protein FMP32, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002615
Physical Location & Seq
Forward (+)
12197828 .. 12201317
3490 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG138500.1

Sequence Viewer

Length: 690 bp
ATGGCCGCTGCTGCGGCGTGTAAACGGGTCGCCCAATCCGGGTTCGGAGCTCTCGGCGGGTCCAAACTGATTTCTCCGAGTTTGCCGCACAGGCATTTGGATTGCAGGCTCATTTCCTCCGAGCTTGTCAAATCTACTAATGGAAAGCGCCTTTTTCTTGTTGACACATTAGCTTTGGTTAGGAGATTAGAGGGGCAAGGGGTGCCCTCGAAGCACGCCGAGGCCATAACAGCTGCCATCACTGAAGTTTTGAATGACAGCTTGGAGAATGTGTCTCAGTCGTTTGTTTCCAAGGCAGAGCAGCAGAAAAATGAGATGATCCAAGACTCGAACTTGTCCAAATTCAAATCCGAAGTTCAAAGTTCTCAGGGACACCACTTTTCTTTGTTGCAACACGAGACTGAAAAACTTCGGAATGATATAGAGAAGATGCGCAATGAATTGAGGTATGAAATCGACAAAGTTACTGCAGGGCAAAGGTTGGACTTGAATCTTGAAAGGGGGAGGATACGGGAAGAGCTAGCAAATCAGAATGCTGAAACCAATAACCTTACTAACAAACTTGATCGGGAAATTCATGCTTTGCGTGCACAAGTGGAAGCCGCAAAATATGATGTCATAAAATACTGCATAGGTACACTTGTCTCCATTTCTGCTGTTGGTCTCGCTGTACTACGTATCTTGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1640

Protein Analysis

229

Amino Acids

25.4

Weight (kDa)

8.75

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CCDC90-like PF07798 54 - 227 1.5e-61 Coiled-coil domain-containing protein 90-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 434
AccB1I GGYRCC 1 cut(s) 202
AciI CCGC 5 cut(s) 6, 14, 57, 86, 603
AclWI GGATC 1 cut(s) 313
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 341, 573
AcuI CTGAAG 1 cut(s) 264
AfaI GTAC 2 cut(s) 637, 672
AfiI CCNNNNNNNGG 1 cut(s) 39
AgsI TTSAA 5 cut(s) 253, 346, 359, 490, 497
AjuI GAANNNNNNNTTGG 2 cut(s) 245, 277
AluBI AGCT 6 cut(s) 50, 124, 173, 233, 261, 520
AluI AGCT 6 cut(s) 50, 124, 173, 233, 261, 520
Alw21I GWGCWC 2 cut(s) 52, 592
Alw26I GTCTC 4 cut(s) 279, 392, 649, 668
Alw44I GTGCAC 1 cut(s) 588
AlwI GGATC 1 cut(s) 313
AoxI GGCC 2 cut(s) 3, 222
ApaLI GTGCAC 1 cut(s) 588
ApeKI GCWGC 4 cut(s) 8, 11, 233, 301
ApoI RAATTY 2 cut(s) 341, 573
Asp700I GAANNNNTTC 1 cut(s) 408
AspLEI GCGC 2 cut(s) 150, 435
AspS9I GGNCC 1 cut(s) 60
AsuC2I CCSGG 1 cut(s) 40
AsuNHI GCTAGC 1 cut(s) 520
AvaII GGWCC 1 cut(s) 60
BaeGI GKGCMC 2 cut(s) 207, 592
BaeI ACNNNNGTAYC 2 cut(s) 627, 660
BanI GGYRCC 1 cut(s) 202
BanII GRGCYC 1 cut(s) 52
BauI CACGAG 1 cut(s) 395
Bbv12I GWGCWC 2 cut(s) 52, 592
BbvI GCAGC 2 cut(s) 220, 313
BccI CCATC 1 cut(s) 245
BciVI GTATCC 1 cut(s) 501
BcnI CCSGG 1 cut(s) 40
BcoDI GTCTC 4 cut(s) 279, 392, 649, 668
BfaI CTAG 1 cut(s) 521
BfmI CTRYAG 1 cut(s) 468
BfoI RGCGCY 1 cut(s) 151
BfuI GTATCC 1 cut(s) 501
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 8 cut(s) 6, 9, 12, 15, 86, 234, 302, 603
BlsI GCNGC 8 cut(s) 7, 10, 13, 16, 87, 235, 303, 604
Bme1390I CCNGG 1 cut(s) 40
Bme18I GGWCC 1 cut(s) 60
BmgT120I GGNCC 1 cut(s) 60
BmiI GGNNCC 2 cut(s) 61, 204
BmrFI CCNGG 1 cut(s) 40
BmsI GCATC 1 cut(s) 420
BmtI GCTAGC 1 cut(s) 524
BpuMI CCSGG 1 cut(s) 40
BsaAI YACGTR 1 cut(s) 677
BsaI GGTCTC 1 cut(s) 668
BsaJI CCNNGG 2 cut(s) 219, 291
BsaXI ACNNNNNCTCC 2 cut(s) 257, 287
Bsc4I CCNNNNNNNGG 1 cut(s) 39
Bse3DI GCAATG 1 cut(s) 442
BseDI CCNNGG 2 cut(s) 219, 291
BseLI CCNNNNNNNGG 1 cut(s) 39
BseMI GCAATG 1 cut(s) 442
BseMII CTCAG 2 cut(s) 290, 380
BseSI GKGCMC 2 cut(s) 207, 592
BseXI GCAGC 2 cut(s) 220, 313
BshFI GGCC 2 cut(s) 5, 224
BshNI GGYRCC 1 cut(s) 202
BsiHKAI GWGCWC 2 cut(s) 52, 592
BsiSI CCGG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 384
BslI CCNNNNNNNGG 1 cut(s) 39
BsmAI GTCTC 4 cut(s) 279, 392, 649, 668
BsmFI GGGAC 1 cut(s) 384
BsmI GAATGC 1 cut(s) 538
BsnI GGCC 2 cut(s) 5, 224
Bso31I GGTCTC 1 cut(s) 668
Bsp1286I GDGCHC 3 cut(s) 52, 207, 592
Bsp143I GATC 2 cut(s) 318, 565
BspACI CCGC 5 cut(s) 6, 14, 57, 86, 603
BspANI GGCC 2 cut(s) 5, 224
BspCNI CTCAG 2 cut(s) 289, 379
BspLI GGNNCC 2 cut(s) 61, 204
BspMAI CTGCAG 1 cut(s) 472
BspOI GCTAGC 1 cut(s) 524
BspPI GGATC 1 cut(s) 313
BspQI GCTCTTC 1 cut(s) 510
BspT107I GGYRCC 1 cut(s) 202
BspTNI GGTCTC 1 cut(s) 668
BsrDI GCAATG 1 cut(s) 442
BssECI CCNNGG 2 cut(s) 219, 291
BssMI GATC 2 cut(s) 318, 565
BssSI CACGAG 1 cut(s) 395
BssT1I CCWWGG 1 cut(s) 291
Bst2BI CACGAG 1 cut(s) 395
Bst6I CTCTTC 1 cut(s) 510
BstAPI GCANNNNNTGC 1 cut(s) 202
BstBAI YACGTR 1 cut(s) 677
BstC8I GCNNGC 4 cut(s) 107, 216, 522, 588
BstDEI CTNAG 2 cut(s) 276, 366
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 2 cut(s) 150, 435
BstKTI GATC 2 cut(s) 321, 568
BstMAI GTCTC 4 cut(s) 279, 392, 649, 668
BstMBI GATC 2 cut(s) 318, 565
BstMWI GCNNNNNNNGC 7 cut(s) 11, 14, 91, 202, 211, 230, 587
BstSCI CCNGG 1 cut(s) 38
BstSFI CTRYAG 1 cut(s) 468
BstSLI GKGCMC 2 cut(s) 207, 592
BstSNI TACGTA 1 cut(s) 677
BstV1I GCAGC 2 cut(s) 220, 313
BsuI GTATCC 1 cut(s) 501
BsuRI GGCC 2 cut(s) 5, 224
BtsIMutI CAGTG 1 cut(s) 240
Cac8I GCNNGC 4 cut(s) 107, 216, 522, 588
CfoI GCGC 2 cut(s) 150, 435
Cfr13I GGNCC 1 cut(s) 60
Csp6I GTAC 2 cut(s) 636, 671
CviAII CATG 1 cut(s) 578
CviQI GTAC 2 cut(s) 636, 671
DdeI CTNAG 2 cut(s) 276, 366
DpnI GATC 2 cut(s) 320, 567
DpnII GATC 2 cut(s) 318, 565
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 510
EarI CTCTTC 1 cut(s) 510
Ecl136II GAGCTC 1 cut(s) 50
Eco105I TACGTA 1 cut(s) 677
Eco130I CCWWGG 1 cut(s) 291
Eco24I GRGCYC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 668
Eco47I GGWCC 1 cut(s) 60
Eco53kI GAGCTC 1 cut(s) 50
Eco57I CTGAAG 1 cut(s) 264
EcoICRI GAGCTC 1 cut(s) 50
EcoT14I CCWWGG 1 cut(s) 291
EcoT38I GRGCYC 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 291
FaeI CATG 1 cut(s) 581
FaiI YATR 7 cut(s) 227, 422, 450, 579, 612, 620, 632
FaqI GGGAC 1 cut(s) 384
FatI CATG 1 cut(s) 577
FauI CCCGC 1 cut(s) 50
Fnu4HI GCNGC 8 cut(s) 6, 9, 12, 15, 86, 234, 302, 603
FriOI GRGCYC 1 cut(s) 52
Fsp4HI GCNGC 8 cut(s) 6, 9, 12, 15, 86, 234, 302, 603
FspBI CTAG 1 cut(s) 521
FspI TGCGCA 1 cut(s) 434
GlaI GCGC 2 cut(s) 149, 434
GluI GCNGC 8 cut(s) 6, 9, 12, 15, 86, 234, 302, 603
HaeII RGCGCY 1 cut(s) 151
HaeIII GGCC 2 cut(s) 5, 224
HapII CCGG 1 cut(s) 39
HhaI GCGC 2 cut(s) 150, 435
Hin1II CATG 1 cut(s) 581
Hin6I GCGC 2 cut(s) 148, 433
HinP1I GCGC 2 cut(s) 148, 433
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HinfI GANTC 2 cut(s) 326, 490
HpaII CCGG 1 cut(s) 39
Hpy166II GTNNAC 4 cut(s) 23, 163, 590, 638
Hpy188I TCNGA 6 cut(s) 47, 78, 121, 352, 414, 531
Hpy188III TCNNGA 3 cut(s) 494, 569, 682
Hpy8I GTNNAC 4 cut(s) 23, 163, 590, 638
HpyCH4IV ACGT 1 cut(s) 676
HpyCH4V TGCA 5 cut(s) 105, 391, 470, 590, 630
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 14, 91, 202, 211, 230, 587
HpyF3I CTNAG 2 cut(s) 276, 366
HpySE526I ACGT 1 cut(s) 676
Hsp92II CATG 1 cut(s) 581
HspAI GCGC 2 cut(s) 148, 433
Kzo9I GATC 2 cut(s) 318, 565
LguI GCTCTTC 1 cut(s) 510
LmnI GCTCC 1 cut(s) 47
LpnPI CCDG 5 cut(s) 52, 76, 91, 353, 456
Lsp1109I GCAGC 2 cut(s) 220, 313
LweI GCATC 1 cut(s) 420
MaeI CTAG 1 cut(s) 521
MaeII ACGT 1 cut(s) 676
MaeIII GTNAC 1 cut(s) 463
MalI GATC 2 cut(s) 320, 567
MboI GATC 2 cut(s) 318, 565
MboII GAAGA 2 cut(s) 439, 527
MhlI GDGCHC 3 cut(s) 52, 207, 592
MluCI AATT 3 cut(s) 341, 440, 573
MlyI GAGTC 1 cut(s) 320
MmeI TCCRAC 1 cut(s) 462
MnlI CCTC 6 cut(s) 127, 184, 214, 217, 438, 498
MroXI GAANNNNTTC 1 cut(s) 408
MspA1I CMGCKG 2 cut(s) 8, 233
MspI CCGG 1 cut(s) 39
MspR9I CCNGG 1 cut(s) 40
Mva1269I GAATGC 1 cut(s) 538
MwoI GCNNNNNNNGC 7 cut(s) 11, 14, 91, 202, 211, 230, 587
NciI CCSGG 1 cut(s) 40
NdeII GATC 2 cut(s) 318, 565
NheI GCTAGC 1 cut(s) 520
NlaIII CATG 1 cut(s) 581
NlaIV GGNNCC 2 cut(s) 61, 204
NmeAIII GCCGAG 2 cut(s) 33, 244
NsbI TGCGCA 1 cut(s) 434
PciSI GCTCTTC 1 cut(s) 510
PctI GAATGC 1 cut(s) 538
PdmI GAANNNNTTC 1 cut(s) 408
PfeI GAWTC 1 cut(s) 490
PkrI GCNGC 8 cut(s) 7, 10, 13, 16, 87, 235, 303, 604
PleI GAGTC 1 cut(s) 320
PpsI GAGTC 1 cut(s) 320
Ppu21I YACGTR 1 cut(s) 677
Psp124BI GAGCTC 1 cut(s) 52
PspN4I GGNNCC 2 cut(s) 61, 204
PspPI GGNCC 1 cut(s) 60
PstI CTGCAG 1 cut(s) 472
PvuII CAGCTG 1 cut(s) 233
RsaI GTAC 2 cut(s) 637, 672
RsaNI GTAC 2 cut(s) 636, 671
SacI GAGCTC 1 cut(s) 52
SapI GCTCTTC 1 cut(s) 510
SatI GCNGC 8 cut(s) 6, 9, 12, 15, 86, 234, 302, 603
Sau3AI GATC 2 cut(s) 318, 565
Sau96I GGNCC 1 cut(s) 60
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 1 cut(s) 40
SduI GDGCHC 3 cut(s) 52, 207, 592
SfaNI GCATC 1 cut(s) 420
SfcI CTRYAG 1 cut(s) 468
SinI GGWCC 1 cut(s) 60
SnaBI TACGTA 1 cut(s) 677
Sse9I AATT 3 cut(s) 341, 440, 573
SsiI CCGC 5 cut(s) 6, 14, 57, 86, 603
SspMI CTAG 1 cut(s) 521
SstI GAGCTC 1 cut(s) 52
StyD4I CCNGG 1 cut(s) 38
StyI CCWWGG 1 cut(s) 291
TaiI ACGT 1 cut(s) 679
TaqI TCGA 3 cut(s) 209, 329, 456
TasI AATT 3 cut(s) 341, 440, 573
TatI WGTACW 1 cut(s) 670
TauI GCSGC 4 cut(s) 8, 17, 88, 605
TfiI GAWTC 1 cut(s) 490
TscAI CASTG 1 cut(s) 247
TseI GCWGC 4 cut(s) 8, 11, 233, 301
TspDTI ATGAA 3 cut(s) 453, 465, 566
TspRI CASTG 1 cut(s) 247
VneI GTGCAC 1 cut(s) 588
VpaK11BI GGWCC 1 cut(s) 60
XapI RAATTY 2 cut(s) 341, 573
XmnI GAANNNNTTC 1 cut(s) 408
XspI CTAG 1 cut(s) 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.