RLG00000017112

TPL-binding domain in jasmonate signalling

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0002230
Physical Location & Seq
Forward (+)
12916008 .. 12921328
5321 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017112

Sequence Viewer

Length: 2094 bp
ATGACCGGTCCGGCGAAGGTAACTCCGTCTCGAACACTCTCTCAACTCCTCAATTTTCAAGGGTTTTCCCCCAATGCTCTGTTTATCATTTTCATGTCTTCTAGGATTGGAGAGAGTGTACCAGTTCGAGTTTGGAGTGTGGGGAAAGCTGAGCTTTTCGGTGTCGGAGCGGCTAGTGAGCCTCTTCTGAAAATGTCTTTCCAGCCCAAAAGCTTTCGGATTCCAAGAGATGCTAGCTGTCTAAATGATGGAAAGATGGGCTGTGATAATTCTTCCAGGAAGCAAGCAATGGAGGCTGTTGATGGCAGGCCAGCTTCAAGAGCTTCAAACTTGGCCGTTGCCCCGTCGGATAACACTTCTGGGTTTCAGACAGTTCCAGGGAAGTTCACTGACTGCCTCTTTGGACAAGAGCCTGGACGGACAGTCAACTTAGTTGATAGAAACATTCAGTCTGTTGGCAGTGGAACTACTAAATTTGGAAGAAAAGGGTTTCAGAATCAATATGGCAATGATCAATCAGTGGATCTGTCAATGTCCCACACCATCGAAGATCCTTCATCATGTCTAGGGTTTAGGGGTGGAATCAAGGAAGTGAAAGTCAATGAAGTTAAGGACTCTGATAATGCCGTATTGGGAGACAATTATACAATTCCAATGTGTACAACCTATAACAAGAATGATGAAAACATCATTTCATTAAGTGCACCTTTGGGAGACAATTGTACAATTCCATTGTGGACTACATTTAATAAGGCAGATGACAATTTCATCTCAGTTTGTCATACTTTTGGCAAGGGAGATGACACTTTCATATCGATGGCTCATAATTACACCAAGGGTGACACTCGTATATTATCAATGGGTCAGCCCTTTGAGAAGGAGAATGAAAGTTTTATATCAATTGGTCAGTCATATGAAAAGGGAGAAGGCAGTTTCATATCATTAGGTAATTCCTACAACAAAGTGCATGAGAGTTTCATTTCTATGGGTCCAGTATATGGTAGAGGAGAAGAGAATTTGATCTCAGTGGCTCTGACCTACGATAAGCATGCTGATAACACTATATCAATGGGTCTGACCTATGACAAGGCTGATTCGAATATTTTACCAATGGACAAACCCTTCTGGTGTGGGATCATCAGTAGCTGTGGTTTGTTGACGTGTAATCAGAACACAGCAGCTCATGCATCAGAAGAATCTGGTGTGAGAGATTCTGATCATCCTGATGAGTCGAAGATAGATGCACATGTAGATGACGCCGTGAAAGTTGATTCCAAAACTGTTAATATTCCCAAAGTAAAAGAGCCAAAGACTAAGAAAGCTCCACCAAACAGCTTTCTTTCGTATAAAAACCTAGATGGAATTATCAAAGGGACTGGGTATCTATGCTCTTGTGCTGACTGCAATCACTCAAAGTGTCTTAATGCTTACGAGTTTGAGCGCCATGCTTGTGCCAAGACCAAACATCCCAATAATCGCATCTACTTTGAGAATGGAAAGACCATCCATGCAGTAGTTGAAGAGCTGAAGAACACTCCTCAGGACATGCTCTTTGATGCCATCCAAAATGTGACAGGGTCTCAGGTTAATAAGAAGAACTTCCGCGTCTGGATAGCATCATTCCAAGCCGCCAGCGTGACCTTCAGCATGTTGAGGTTTGATCCATGGATAGCATCGCTTGTAGTAAACTATAGAGTGGAATTTGGGCATATTTGGATTTTGAACTTTTGGATGTTTACAGGAGCAGTGGTGGCCATTGTGGTTGAAAGGGAAAATTCAGAAGCATGGTCCATACACTTCGACTTCAAGTTGCTCGCAGCTGTTTATGGGGCTCTTCTATCGGGGGCTGTATATTATGTCATGGGGCTGGTTGTGACGAAGAAGGGACCAGTTTTCTACTCTGTCTTTAACCCCTTGGCCACCCTGCTTGTGGCGATTTTGGGATCATTTTTTCTGGCAGAACAATTTCTCATCGGAGCTGTAACCATTGTGGGAGGCCTCTATCTTGTTCTTTGGGGAAAAGCAAGAGATCAGCCTCCCTCTTTGAATGCCAATGTGGAAGAACCAACTGGAACCCCAGCAATAGACGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas

Protein Analysis

698

Amino Acids

76.34

Weight (kDa)

5.92

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TDBD PF16135 454 - 508 3.1e-10 Tify domain binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 998
AccBSI CCGCTC 1 cut(s) 170
AccII CGCG 1 cut(s) 1605
AciI CCGC 3 cut(s) 170, 1603, 1629
AclWI GGATC 5 cut(s) 531, 545, 1142, 1655, 1951
AcoI YGGCCR 3 cut(s) 333, 1752, 1917
AcsI RAATTY 4 cut(s) 473, 1015, 1700, 1774
AcuI CTGAAG 2 cut(s) 1547, 1627
AcyI GRCGYC 1 cut(s) 1257
AfaI GTAC 3 cut(s) 120, 661, 724
AfiI CCNNNNNNNGG 2 cut(s) 998, 1930
AflIII ACRYGT 2 cut(s) 1160, 1246
AgeI ACCGGT 1 cut(s) 5
AgsI TTSAA 8 cut(s) 59, 318, 327, 1520, 1723, 1766, 1807, 2047
AhdI GACNNNNNGTC 1 cut(s) 422
AjiI CACGTC 1 cut(s) 1161
AjnI CCWGG 3 cut(s) 275, 376, 412
Alw21I GWGCWC 1 cut(s) 706
Alw26I GTCTC 4 cut(s) 33, 630, 708, 1584
Alw44I GTGCAC 1 cut(s) 702
AlwI GGATC 5 cut(s) 531, 545, 1142, 1655, 1951
AlwNI CAGNNNCTG 1 cut(s) 1146
AoxI GGCC 5 cut(s) 308, 333, 1752, 1917, 1996
ApaLI GTGCAC 1 cut(s) 702
ApeKI GCWGC 2 cut(s) 1178, 1817
ApoI RAATTY 4 cut(s) 473, 1015, 1700, 1774
ArsI GACNNNNNNTTYG 4 cut(s) 383, 415, 1535, 1567
AsiGI ACCGGT 1 cut(s) 5
Asp700I GAANNNNTTC 2 cut(s) 1598, 1965
AspLEI GCGC 1 cut(s) 1443
AspS9I GGNCC 4 cut(s) 8, 989, 1788, 1886
AsuHPI GGTGA 1 cut(s) 851
AsuII TTCGAA 1 cut(s) 1097
AsuNHI GCTAGC 1 cut(s) 233
AvaII GGWCC 4 cut(s) 8, 989, 1788, 1886
AxyI CCTNAGG 1 cut(s) 1539
BaeGI GKGCMC 1 cut(s) 706
BalI TGGCCA 2 cut(s) 1754, 1919
BanII GRGCYC 1 cut(s) 1834
BbsI GAAGAC 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 706
BbvI GCAGC 2 cut(s) 1190, 1829
BccI CCATC 8 cut(s) 242, 250, 296, 551, 811, 1352, 1511, 1568
BceAI ACGGC 3 cut(s) 320, 611, 1244
BcgI CGANNNNNNTGC 2 cut(s) 1031, 1065
BciT130I CCWGG 3 cut(s) 277, 378, 414
BclI TGATCA 2 cut(s) 511, 1216
BcoDI GTCTC 4 cut(s) 33, 630, 708, 1584
BfaI CTAG 5 cut(s) 102, 174, 234, 566, 1355
BfmI CTRYAG 1 cut(s) 1690
BfoI RGCGCY 1 cut(s) 1444
BisI GCNGC 4 cut(s) 171, 1179, 1629, 1818
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 4 cut(s) 172, 1180, 1630, 1819
Bme1390I CCNGG 3 cut(s) 277, 378, 414
Bme18I GGWCC 4 cut(s) 8, 989, 1788, 1886
BmeRI GACNNNNNGTC 1 cut(s) 422
BmgBI CACGTC 1 cut(s) 1161
BmgT120I GGNCC 4 cut(s) 8, 989, 1788, 1886
BmiI GGNNCC 3 cut(s) 990, 1887, 2074
BmrFI CCNGG 3 cut(s) 277, 378, 414
BmrI ACTGGG 1 cut(s) 1386
BmsI GCATC 7 cut(s) 220, 1196, 1231, 1488, 1546, 1625, 1682
BmtI GCTAGC 1 cut(s) 237
BmuI ACTGGG 1 cut(s) 1386
BpiI GAAGAC 1 cut(s) 90
Bpu1102I GCTNAGC 1 cut(s) 150
Bpu14I TTCGAA 1 cut(s) 1097
Bsa29I ATCGAT 1 cut(s) 815
BsaBI GATNNNNATC 1 cut(s) 1215
BsaHI GRCGYC 1 cut(s) 1257
BsaI GGTCTC 1 cut(s) 1584
BsaJI CCNNGG 4 cut(s) 377, 834, 1664, 1914
BsaWI WCCGGW 1 cut(s) 5
BsaXI ACNNNNNCTCC 4 cut(s) 102, 132, 1734, 1764
Bsc4I CCNNNNNNNGG 2 cut(s) 998, 1930
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 5 cut(s) 122, 992, 1381, 1889, 2074
Bse21I CCTNAGG 1 cut(s) 1539
Bse3DI GCAATG 2 cut(s) 294, 514
Bse8I GATNNNNATC 1 cut(s) 1215
BseBI CCWGG 3 cut(s) 277, 378, 414
BseCI ATCGAT 1 cut(s) 815
BseDI CCNNGG 4 cut(s) 377, 834, 1664, 1914
BseGI GGATG 5 cut(s) 1219, 1465, 1503, 1560, 1737
BseJI GATNNNNATC 1 cut(s) 1215
BseLI CCNNNNNNNGG 2 cut(s) 998, 1930
BseMI GCAATG 2 cut(s) 294, 514
BseMII CTCAG 5 cut(s) 141, 786, 1038, 1553, 1595
BseNI ACTGG 5 cut(s) 122, 992, 1381, 1889, 2074
BseRI GAGGAG 3 cut(s) 38, 1020, 1527
BseSI GKGCMC 1 cut(s) 706
BseXI GCAGC 2 cut(s) 1190, 1829
BseYI CCCAGC 1 cut(s) 2077
Bsh1236I CGCG 1 cut(s) 1605
BshFI GGCC 5 cut(s) 310, 335, 1754, 1919, 1998
BshTI ACCGGT 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 815
BsiHKAI GWGCWC 1 cut(s) 706
BsiSI CCGG 2 cut(s) 6, 11
BslFI GGGAC 3 cut(s) 520, 1387, 1899
BslI CCNNNNNNNGG 2 cut(s) 998, 1930
BsmAI GTCTC 4 cut(s) 33, 630, 708, 1584
BsmBI CGTCTC 1 cut(s) 33
BsmFI GGGAC 3 cut(s) 520, 1387, 1899
BsmI GAATGC 1 cut(s) 2053
BsnI GGCC 5 cut(s) 310, 335, 1754, 1919, 1998
Bso31I GGTCTC 1 cut(s) 1584
Bsp119I TTCGAA 1 cut(s) 1097
Bsp1286I GDGCHC 2 cut(s) 706, 1834
Bsp1407I TGTACA 2 cut(s) 659, 722
Bsp143I GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
Bsp1720I GCTNAGC 1 cut(s) 150
Bsp19I CCATGG 1 cut(s) 1664
BspACI CCGC 3 cut(s) 170, 1603, 1629
BspANI GGCC 5 cut(s) 310, 335, 1754, 1919, 1998
BspCNI CTCAG 5 cut(s) 142, 785, 1037, 1552, 1594
BspDI ATCGAT 1 cut(s) 815
BspFNI CGCG 1 cut(s) 1605
BspLI GGNNCC 3 cut(s) 990, 1887, 2074
BspOI GCTAGC 1 cut(s) 237
BspPI GGATC 5 cut(s) 531, 545, 1142, 1655, 1951
BspQI GCTCTTC 2 cut(s) 1515, 1839
BspT104I TTCGAA 1 cut(s) 1097
BspTNI GGTCTC 1 cut(s) 1584
BsrBI CCGCTC 1 cut(s) 170
BsrDI GCAATG 2 cut(s) 294, 514
BsrFI RCCGGY 1 cut(s) 5
BsrGI TGTACA 2 cut(s) 659, 722
BsrI ACTGG 5 cut(s) 122, 992, 1381, 1889, 2074
BssAI RCCGGY 1 cut(s) 5
BssECI CCNNGG 4 cut(s) 377, 834, 1664, 1914
BssMI GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
BssNI GRCGYC 1 cut(s) 1257
BssT1I CCWWGG 3 cut(s) 834, 1664, 1914
Bst2UI CCWGG 3 cut(s) 277, 378, 414
Bst4CI ACNGT 3 cut(s) 373, 424, 1282
Bst6I CTCTTC 4 cut(s) 189, 1005, 1515, 1839
BstACI GRCGYC 1 cut(s) 1257
BstAPI GCANNNNNTGC 1 cut(s) 1184
BstAUI TGTACA 2 cut(s) 659, 722
BstBI TTCGAA 1 cut(s) 1097
BstC8I GCNNGC 7 cut(s) 235, 285, 308, 312, 1050, 1633, 1815
BstDEI CTNAG 7 cut(s) 150, 430, 772, 1024, 1314, 1539, 1581
BstDSI CCRYGG 1 cut(s) 1664
BstF5I GGATG 5 cut(s) 1219, 1465, 1503, 1560, 1737
BstFNI CGCG 1 cut(s) 1605
BstH2I RGCGCY 1 cut(s) 1444
BstHHI GCGC 1 cut(s) 1443
BstKTI GATC 9 cut(s) 514, 526, 553, 1023, 1137, 1219, 1663, 1946, 2032
BstMAI GTCTC 4 cut(s) 33, 630, 708, 1584
BstMBI GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
BstMWI GCNNNNNNNGC 4 cut(s) 293, 320, 1184, 1751
BstNI CCWGG 3 cut(s) 277, 378, 414
BstNSI RCATGY 4 cut(s) 1052, 1250, 1549, 1651
BstSCI CCNGG 3 cut(s) 275, 376, 412
BstSFI CTRYAG 1 cut(s) 1690
BstSLI GKGCMC 1 cut(s) 706
BstUI CGCG 1 cut(s) 1605
BstV1I GCAGC 2 cut(s) 1190, 1829
BstV2I GAAGAC 1 cut(s) 90
BstX2I RGATCY 2 cut(s) 523, 550
BstYI RGATCY 2 cut(s) 523, 550
Bsu15I ATCGAT 1 cut(s) 815
Bsu36I CCTNAGG 1 cut(s) 1539
BsuRI GGCC 5 cut(s) 310, 335, 1754, 1919, 1998
BsuTUI ATCGAT 1 cut(s) 815
BtgI CCRYGG 1 cut(s) 1664
BtgZI GCGATG 1 cut(s) 1659
BtrI CACGTC 1 cut(s) 1161
BtsCI GGATG 5 cut(s) 1219, 1465, 1503, 1560, 1737
BtsI GCAGTG 2 cut(s) 466, 1752
BtsIMutI CAGTG 5 cut(s) 387, 466, 525, 1032, 1752
Cac8I GCNNGC 7 cut(s) 235, 285, 308, 312, 1050, 1633, 1815
CaiI CAGNNNCTG 1 cut(s) 1146
CfoI GCGC 1 cut(s) 1443
Cfr10I RCCGGY 1 cut(s) 5
Cfr13I GGNCC 4 cut(s) 8, 989, 1788, 1886
ClaI ATCGAT 1 cut(s) 815
CpoI CGGWCCG 1 cut(s) 8
CseI GACGC 2 cut(s) 1265, 1594
Csp6I GTAC 3 cut(s) 119, 660, 723
CspAI ACCGGT 1 cut(s) 5
CspCI CAANNNNNGTGG 2 cut(s) 1909, 1944
CspI CGGWCCG 1 cut(s) 8
CviQI GTAC 3 cut(s) 119, 660, 723
DdeI CTNAG 7 cut(s) 150, 430, 772, 1024, 1314, 1539, 1581
DpnI GATC 9 cut(s) 513, 525, 552, 1022, 1136, 1218, 1662, 1945, 2031
DpnII GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
DriI GACNNNNNGTC 1 cut(s) 422
EaeI YGGCCR 3 cut(s) 333, 1752, 1917
Eam1104I CTCTTC 4 cut(s) 189, 1005, 1515, 1839
Eam1105I GACNNNNNGTC 1 cut(s) 422
EarI CTCTTC 4 cut(s) 189, 1005, 1515, 1839
Eco130I CCWWGG 3 cut(s) 834, 1664, 1914
Eco147I AGGCCT 1 cut(s) 1998
Eco24I GRGCYC 1 cut(s) 1834
Eco31I GGTCTC 1 cut(s) 1584
Eco47I GGWCC 4 cut(s) 8, 989, 1788, 1886
Eco57I CTGAAG 2 cut(s) 1547, 1627
Eco81I CCTNAGG 1 cut(s) 1539
EcoRII CCWGG 3 cut(s) 275, 376, 412
EcoT14I CCWWGG 3 cut(s) 834, 1664, 1914
EcoT22I ATGCAT 1 cut(s) 1189
EcoT38I GRGCYC 1 cut(s) 1834
ErhI CCWWGG 3 cut(s) 834, 1664, 1914
Esp3I CGTCTC 1 cut(s) 33
FalI AAGNNNNNCTT 6 cut(s) 138, 170, 691, 723, 1583, 1615
FaqI GGGAC 3 cut(s) 520, 1387, 1899
FauNDI CATATG 1 cut(s) 913
FbaI TGATCA 2 cut(s) 511, 1216
Fnu4HI GCNGC 4 cut(s) 171, 1179, 1629, 1818
FokI GGATG 5 cut(s) 1206, 1452, 1490, 1547, 1744
FriOI GRGCYC 1 cut(s) 1834
Fsp4HI GCNGC 4 cut(s) 171, 1179, 1629, 1818
FspBI CTAG 5 cut(s) 102, 174, 234, 566, 1355
GlaI GCGC 1 cut(s) 1442
GluI GCNGC 4 cut(s) 171, 1179, 1629, 1818
GsaI CCCAGC 1 cut(s) 2081
HaeII RGCGCY 1 cut(s) 1444
HaeIII GGCC 5 cut(s) 310, 335, 1754, 1919, 1998
HapII CCGG 2 cut(s) 6, 11
HgaI GACGC 2 cut(s) 1265, 1594
HhaI GCGC 1 cut(s) 1443
Hin1I GRCGYC 1 cut(s) 1257
Hin6I GCGC 1 cut(s) 1441
HinP1I GCGC 1 cut(s) 1441
HincII GTYRAC 2 cut(s) 427, 1158
HindII GTYRAC 2 cut(s) 427, 1158
HindIII AAGCTT 1 cut(s) 211
HinfI GANTC 9 cut(s) 220, 496, 582, 614, 1094, 1196, 1211, 1229, 1271
HpaII CCGG 2 cut(s) 6, 11
HphI GGTGA 1 cut(s) 851
Hpy166II GTNNAC 9 cut(s) 119, 387, 427, 660, 704, 738, 1158, 1687, 1737
Hpy188III TCNNGA 5 cut(s) 30, 318, 1223, 1541, 1609
Hpy8I GTNNAC 9 cut(s) 119, 387, 427, 660, 704, 738, 1158, 1687, 1737
Hpy99I CGWCG 1 cut(s) 349
HpyAV CCTTC 7 cut(s) 10, 564, 871, 920, 1132, 1651, 1876
HpyCH4III ACNGT 3 cut(s) 373, 424, 1282
HpyCH4IV ACGT 1 cut(s) 1160
HpyCH4V TGCA 6 cut(s) 704, 967, 1187, 1244, 1404, 1511
HpyF10VI GCNNNNNNNGC 4 cut(s) 293, 320, 1184, 1751
HpyF3I CTNAG 7 cut(s) 150, 430, 772, 1024, 1314, 1539, 1581
HpySE526I ACGT 1 cut(s) 1160
Hsp92I GRCGYC 1 cut(s) 1257
HspAI GCGC 1 cut(s) 1441
Ksp22I TGATCA 2 cut(s) 511, 1216
Kzo9I GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
LguI GCTCTTC 2 cut(s) 1515, 1839
LmnI GCTCC 4 cut(s) 167, 1327, 1742, 1976
Lsp1109I GCAGC 2 cut(s) 1190, 1829
LweI GCATC 7 cut(s) 220, 1196, 1231, 1488, 1546, 1625, 1682
MaeI CTAG 5 cut(s) 102, 174, 234, 566, 1355
MaeII ACGT 1 cut(s) 1160
MaeIII GTNAC 6 cut(s) 19, 839, 1570, 1636, 1873, 1981
MalI GATC 9 cut(s) 513, 525, 552, 1022, 1136, 1218, 1662, 1945, 2031
MbiI CCGCTC 1 cut(s) 170
MboI GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
MfeI CAATTG 2 cut(s) 718, 900
MflI RGATCY 2 cut(s) 523, 550
MhlI GDGCHC 2 cut(s) 706, 1834
MlsI TGGCCA 2 cut(s) 1754, 1919
MluNI TGGCCA 2 cut(s) 1754, 1919
MlyI GAGTC 2 cut(s) 608, 1238
MmeI TCCRAC 2 cut(s) 145, 327
Mox20I TGGCCA 2 cut(s) 1754, 1919
Mph1103I ATGCAT 1 cut(s) 1189
MroXI GAANNNNTTC 2 cut(s) 1598, 1965
MscI TGGCCA 2 cut(s) 1754, 1919
MseI TTAA 8 cut(s) 609, 698, 747, 1284, 1422, 1587, 1908, 2092
MslI CAYNNNNRTG 6 cut(s) 92, 815, 983, 1224, 1251, 1449
Msp20I TGGCCA 2 cut(s) 1754, 1919
MspA1I CMGCKG 1 cut(s) 1820
MspI CCGG 2 cut(s) 6, 11
MspR9I CCNGG 3 cut(s) 277, 378, 414
MunI CAATTG 2 cut(s) 718, 900
Mva1269I GAATGC 1 cut(s) 2053
MvaI CCWGG 3 cut(s) 277, 378, 414
MvnI CGCG 1 cut(s) 1605
MwoI GCNNNNNNNGC 4 cut(s) 293, 320, 1184, 1751
NcoI CCATGG 1 cut(s) 1664
NdeI CATATG 1 cut(s) 913
NdeII GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
NheI GCTAGC 1 cut(s) 233
NlaIV GGNNCC 3 cut(s) 990, 1887, 2074
NmuCI GTSAC 4 cut(s) 839, 1570, 1636, 1873
NsiI ATGCAT 1 cut(s) 1189
NspI RCATGY 4 cut(s) 1052, 1250, 1549, 1651
NspV TTCGAA 1 cut(s) 1097
PaeI GCATGC 1 cut(s) 1052
PceI AGGCCT 1 cut(s) 1998
PciI ACATGT 1 cut(s) 1246
PciSI GCTCTTC 2 cut(s) 1515, 1839
PctI GAATGC 1 cut(s) 2053
PdmI GAANNNNTTC 2 cut(s) 1598, 1965
PfeI GAWTC 7 cut(s) 220, 496, 582, 1094, 1196, 1211, 1271
PflFI GACNNNGTC 1 cut(s) 1576
PflMI CCANNNNNTGG 1 cut(s) 998
PfoI TCCNGGA 1 cut(s) 275
PinAI ACCGGT 1 cut(s) 5
PkrI GCNGC 4 cut(s) 172, 1180, 1630, 1819
PleI GAGTC 2 cut(s) 608, 1237
PpsI GAGTC 2 cut(s) 608, 1237
PscI ACATGT 1 cut(s) 1246
Psp6I CCWGG 3 cut(s) 275, 376, 412
PspFI CCCAGC 1 cut(s) 2077
PspGI CCWGG 3 cut(s) 275, 376, 412
PspN4I GGNNCC 3 cut(s) 990, 1887, 2074
PspPI GGNCC 4 cut(s) 8, 989, 1788, 1886
PstNI CAGNNNCTG 1 cut(s) 1146
PsuI RGATCY 2 cut(s) 523, 550
PsyI GACNNNGTC 1 cut(s) 1576
PvuII CAGCTG 1 cut(s) 1820
RsaI GTAC 3 cut(s) 120, 661, 724
RsaNI GTAC 3 cut(s) 119, 660, 723
RseI CAYNNNNRTG 6 cut(s) 92, 815, 983, 1224, 1251, 1449
Rsr2I CGGWCCG 1 cut(s) 8
RsrII CGGWCCG 1 cut(s) 8
SapI GCTCTTC 2 cut(s) 1515, 1839
SaqAI TTAA 8 cut(s) 609, 698, 747, 1284, 1422, 1587, 1908, 2092
SatI GCNGC 4 cut(s) 171, 1179, 1629, 1818
Sau3AI GATC 9 cut(s) 511, 523, 550, 1020, 1134, 1216, 1660, 1943, 2029
Sau96I GGNCC 4 cut(s) 8, 989, 1788, 1886
SchI GAGTC 2 cut(s) 608, 1238
ScrFI CCNGG 3 cut(s) 277, 378, 414
SduI GDGCHC 2 cut(s) 706, 1834
SfaNI GCATC 7 cut(s) 220, 1196, 1231, 1488, 1546, 1625, 1682
SfcI CTRYAG 1 cut(s) 1690
SfuI TTCGAA 1 cut(s) 1097
SinI GGWCC 4 cut(s) 8, 989, 1788, 1886
SmiMI CAYNNNNRTG 6 cut(s) 92, 815, 983, 1224, 1251, 1449
SphI GCATGC 1 cut(s) 1052
SseBI AGGCCT 1 cut(s) 1998
SsiI CCGC 3 cut(s) 170, 1603, 1629
SspI AATATT 2 cut(s) 1102, 1288
SspMI CTAG 5 cut(s) 102, 174, 234, 566, 1355
StuI AGGCCT 1 cut(s) 1998
StyD4I CCNGG 3 cut(s) 275, 376, 412
StyI CCWWGG 3 cut(s) 834, 1664, 1914
TaaI ACNGT 3 cut(s) 373, 424, 1282
TaiI ACGT 1 cut(s) 1163
TaqI TCGA 7 cut(s) 31, 127, 546, 815, 1097, 1232, 1800
TatI WGTACW 2 cut(s) 659, 722
TauI GCSGC 2 cut(s) 173, 1631
TfiI GAWTC 7 cut(s) 220, 496, 582, 1094, 1196, 1211, 1271
Tru1I TTAA 8 cut(s) 609, 698, 747, 1284, 1422, 1587, 1908, 2092
Tru9I TTAA 8 cut(s) 609, 698, 747, 1284, 1422, 1587, 1908, 2092
TscAI CASTG 5 cut(s) 394, 466, 525, 1032, 1752
TseFI GTSAC 4 cut(s) 839, 1570, 1636, 1873
TseI GCWGC 2 cut(s) 1178, 1817
Tsp45I GTSAC 4 cut(s) 839, 1570, 1636, 1873
TspGWI ACGGA 2 cut(s) 15, 433
TspRI CASTG 5 cut(s) 394, 466, 525, 1032, 1752
Tth111I GACNNNGTC 1 cut(s) 1576
Van91I CCANNNNNTGG 1 cut(s) 998
VneI GTGCAC 1 cut(s) 702
VpaK11BI GGWCC 4 cut(s) 8, 989, 1788, 1886
XapI RAATTY 4 cut(s) 473, 1015, 1700, 1774
XceI RCATGY 4 cut(s) 1052, 1250, 1549, 1651
XcmI CCANNNNNNNNNTGG 2 cut(s) 129, 1927
XmnI GAANNNNTTC 2 cut(s) 1598, 1965
XspI CTAG 5 cut(s) 102, 174, 234, 566, 1355
Zsp2I ATGCAT 1 cut(s) 1189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.