RLG00000021035

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0004659
Physical Location & Seq
Reverse (-)
71211921 .. 71216882
4962 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021035

Sequence Viewer

Length: 1314 bp
ATGATTTTTGAATTCTCATCTGTTGTGAAACTAGAGTTGGTGTTTATCTATGAAAATGTGAAAGATTTTTGTCGTGATTGTGGATTGTTCCTTCATGATGCTCTAGGGTGTGACAAAACGTTGGTCAAGGAGAATGAGAAGATTAAAGCTAAACCTTCGGCAGCCGCCATGGTAGGTCTGTCTCTGAGCTCGGAGGTAGAGGCTGTTTCTTATCCTTCCAGTGCTTTTGATAGGGAGGTGGGCATGGGTATGGAGTCAGAACATGGATGCATGGAACTGGTGATGGTTGGGCAGGAGTCGGGTTCTCCGAGTGTCGATGGTATTCTTGCAGAGAAGGGCAGCCAAGCGGTGGATGCAACTCTTGGAATATCGGGTTTCGAGAATATGGGAAGCCCCATAATCTTGCAACACGTGCTGGTTGATATTAAGCAGGTAGGAAGTACGTTCACTCATGGACCTAGTCCATCTATCCCGGGCAAGGAAGGGAAGAAGATTAGAAAGTATAAGCGAAGGGGAAAATTGAGTTTTGAATCCGAGGAGGCTGAAATTGCTTGTAAGGGCTTGCTTGTGCAACCGGTGGAGGGTGAGGCTATGCAGATGGCGGTGTCTACTATTGCAGAGGGCAGAGCCACCGCTGCTGCAGTCAACAACCAATCACCGGCATCATGCAAGAAGCCCCGGGCGGCGCTCGCGGCCCCGAAAACGACGCCGTCTTCGTCGCAGCAGCAGCAGCAGCAGCAGCAACCGCAAATCAGATTCCGCGGCGTGCGGAAGCGGCCGTGGGGCCGATTCGCCGCCGAGATCAGAGACCCGTGGAAGAAGACGCGTGTCTGGCTCGGGACCTTCGATTCCGCCGAGGACGCGGCGAGAGCGTATGATGCCGCCGCCCGATCGTTGCGGGGGCCCAAGGCCAAGACCAACTTCTCCCTGCCGTGCGATCCTTTCTACGGCGGCGATTTCAACGACGACGCGATTTGCTCTAAGATCGATGTGATTCAGGCCAGCCGGCCGACCTCCAGCAGCCTCAGCAGCACCGTCGAGTCCTTCAGCGGACCGAGGGTCAACTCCGGCAAGCCTCCTCCGATGAAACCCACGCAGCGGAGACCGGTGTATCCGGTTTCGCCAGAGGACTGCCACAGCGATTGTGACTCATCTTCCTCCGTCGTCGATGACGGTGACGATTGCGTCCTCACGTCGTCTTTCCGGAAAGCCCTGCCCTTCGATCTGAACATGCCGCCGCCGATGGATGGTTTTGATTTCTCCGCCGACAACGTGGATGATCACGATCTTCAAGCCACCGCTCTCTGCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AP2

Protein Analysis

438

Amino Acids

47.22

Weight (kDa)

5.57

Isoelectric Point (pI)

50.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AP2 PF00847 252 - 301 1.7e-13 AP2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1184
Acc36I ACCTGC 1 cut(s) 421
AccB7I CCANNNNNTGG 1 cut(s) 349
AccBSI CCGCTC 1 cut(s) 1301
AccI GTMKAC 1 cut(s) 608
AccII CGCG 5 cut(s) 692, 762, 826, 863, 971
AccIII TCCGGA 1 cut(s) 1203
AclI AACGTT 1 cut(s) 119
AclWI GGATC 1 cut(s) 932
AcoI YGGCCR 2 cut(s) 776, 1007
AcsI RAATTY 1 cut(s) 11
AcuI CTGAAG 1 cut(s) 1030
AcvI CACGTG 1 cut(s) 412
AcyI GRCGYC 1 cut(s) 707
AfaI GTAC 1 cut(s) 442
AfiI CCNNNNNNNGG 7 cut(s) 349, 478, 581, 658, 947, 1098, 1247
AflIII ACRYGT 2 cut(s) 409, 824
AgeI ACCGGT 2 cut(s) 574, 1105
AgsI TTSAA 4 cut(s) 11, 530, 961, 1292
AhdI GACNNNNNGTC 1 cut(s) 1058
AjiI CACGTC 1 cut(s) 1194
AjuI GAANNNNNNNTTGG 4 cut(s) 20, 52, 905, 937
AluBI AGCT 2 cut(s) 149, 189
AluI AGCT 2 cut(s) 149, 189
Alw21I GWGCWC 1 cut(s) 191
Alw26I GTCTC 3 cut(s) 186, 801, 1096
AlwI GGATC 1 cut(s) 932
Ama87I CYCGRG 3 cut(s) 472, 678, 836
Aor13HI TCCGGA 1 cut(s) 1203
AoxI GGCC 7 cut(s) 693, 776, 784, 902, 909, 999, 1007
ApaI GGGCCC 1 cut(s) 906
ApoI RAATTY 1 cut(s) 11
ArsI GACNNNNNNTTYG 4 cut(s) 108, 140, 697, 729
AsiGI ACCGGT 2 cut(s) 574, 1105
AspLEI GCGC 1 cut(s) 688
AspS9I GGNCC 7 cut(s) 455, 694, 784, 840, 902, 903, 1052
AsuC2I CCSGG 4 cut(s) 473, 474, 679, 680
AsuHPI GGTGA 4 cut(s) 292, 596, 648, 1187
AvaI CYCGRG 3 cut(s) 472, 678, 836
AvaII GGWCC 3 cut(s) 455, 840, 1052
BaeGI GKGCMC 1 cut(s) 906
BaeI ACNNNNGTAYC 2 cut(s) 1094, 1127
BanII GRGCYC 2 cut(s) 191, 906
BbrPI CACGTG 1 cut(s) 412
BbsI GAAGAC 2 cut(s) 705, 827
Bbv12I GWGCWC 1 cut(s) 191
BbvCI CCTCAGC 1 cut(s) 1025
BccI CCATC 6 cut(s) 277, 311, 472, 592, 1237, 1241
BceAI ACGGC 4 cut(s) 694, 763, 916, 964
BcgI CGANNNNNNTGC 2 cut(s) 1018, 1052
BciVI GTATCC 1 cut(s) 1122
BclI TGATCA 1 cut(s) 1279
BcnI CCSGG 4 cut(s) 473, 474, 679, 680
BcoDI GTCTC 3 cut(s) 186, 801, 1096
BfaI CTAG 3 cut(s) 32, 104, 459
BfmI CTRYAG 1 cut(s) 639
BfoI RGCGCY 1 cut(s) 689
BfuAI ACCTGC 1 cut(s) 421
BfuI GTATCC 1 cut(s) 1122
Bme1390I CCNGG 4 cut(s) 473, 474, 679, 680
Bme18I GGWCC 3 cut(s) 455, 840, 1052
BmeRI GACNNNNNGTC 1 cut(s) 1058
BmeT110I CYCGRG 3 cut(s) 472, 678, 836
BmgBI CACGTC 1 cut(s) 1194
BmgT120I GGNCC 7 cut(s) 455, 694, 784, 840, 902, 903, 1052
BmiI GGNNCC 5 cut(s) 696, 785, 841, 903, 904
BmrFI CCNGG 4 cut(s) 473, 474, 679, 680
BmsI GCATC 5 cut(s) 88, 257, 343, 671, 868
BoxI GACNNNNGTC 1 cut(s) 827
BpiI GAAGAC 2 cut(s) 705, 827
BpmI CTGGAG 1 cut(s) 1000
Bpu10I CCTNAGC 1 cut(s) 1025
BpuMI CCSGG 4 cut(s) 473, 474, 679, 680
Bsa29I ATCGAT 1 cut(s) 987
BsaAI YACGTR 1 cut(s) 412
BsaBI GATNNNNATC 1 cut(s) 1284
BsaHI GRCGYC 1 cut(s) 707
BsaI GGTCTC 2 cut(s) 801, 1096
BsaWI WCCGGW 4 cut(s) 574, 1105, 1114, 1203
Bsc4I CCNNNNNNNGG 7 cut(s) 349, 478, 581, 658, 947, 1098, 1247
Bse118I RCCGGY 4 cut(s) 574, 658, 1005, 1105
Bse1I ACTGG 2 cut(s) 219, 282
Bse8I GATNNNNATC 1 cut(s) 1284
BseAI TCCGGA 1 cut(s) 1203
BseCI ATCGAT 1 cut(s) 987
BseGI GGATG 4 cut(s) 272, 358, 1252, 1282
BseJI GATNNNNATC 1 cut(s) 1284
BseLI CCNNNNNNNGG 7 cut(s) 349, 478, 581, 658, 947, 1098, 1247
BseMII CTCAG 2 cut(s) 176, 1039
BseNI ACTGG 2 cut(s) 219, 282
BseRI GAGGAG 2 cut(s) 551, 1068
BseSI GKGCMC 1 cut(s) 906
BseX3I CGGCCG 2 cut(s) 776, 1007
Bsh1236I CGCG 5 cut(s) 692, 762, 826, 863, 971
Bsh1285I CGRYCG 3 cut(s) 779, 893, 1010
BshFI GGCC 7 cut(s) 695, 778, 786, 904, 911, 1001, 1009
BshTI ACCGGT 2 cut(s) 574, 1105
BshVI ATCGAT 1 cut(s) 987
BsiEI CGRYCG 3 cut(s) 779, 893, 1010
BsiHKAI GWGCWC 1 cut(s) 191
BsiHKCI CYCGRG 3 cut(s) 472, 678, 836
BsiSI CCGG 9 cut(s) 473, 575, 659, 679, 1006, 1068, 1106, 1115, 1204
BslFI GGGAC 1 cut(s) 853
BslI CCNNNNNNNGG 7 cut(s) 349, 478, 581, 658, 947, 1098, 1247
BsmAI GTCTC 3 cut(s) 186, 801, 1096
BsmFI GGGAC 1 cut(s) 853
BsnI GGCC 7 cut(s) 695, 778, 786, 904, 911, 1001, 1009
Bso31I GGTCTC 2 cut(s) 801, 1096
BsoBI CYCGRG 3 cut(s) 472, 678, 836
Bsp120I GGGCCC 1 cut(s) 902
Bsp1286I GDGCHC 2 cut(s) 191, 906
Bsp13I TCCGGA 1 cut(s) 1203
Bsp143I GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
Bsp19I CCATGG 1 cut(s) 168
BspANI GGCC 7 cut(s) 695, 778, 786, 904, 911, 1001, 1009
BspCNI CTCAG 2 cut(s) 177, 1038
BspDI ATCGAT 1 cut(s) 987
BspEI TCCGGA 1 cut(s) 1203
BspFNI CGCG 5 cut(s) 692, 762, 826, 863, 971
BspHI TCATGA 1 cut(s) 94
BspLI GGNNCC 5 cut(s) 696, 785, 841, 903, 904
BspMAI CTGCAG 1 cut(s) 643
BspMI ACCTGC 1 cut(s) 421
BspPI GGATC 1 cut(s) 932
BspTNI GGTCTC 2 cut(s) 801, 1096
BsrBI CCGCTC 1 cut(s) 1301
BsrFI RCCGGY 4 cut(s) 574, 658, 1005, 1105
BsrI ACTGG 2 cut(s) 219, 282
BssAI RCCGGY 4 cut(s) 574, 658, 1005, 1105
BssMI GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
BssNI GRCGYC 1 cut(s) 707
BssT1I CCWWGG 2 cut(s) 168, 906
Bst4CI ACNGT 2 cut(s) 1036, 1175
BstACI GRCGYC 1 cut(s) 707
BstAPI GCANNNNNTGC 1 cut(s) 412
BstBAI YACGTR 1 cut(s) 412
BstC8I GCNNGC 6 cut(s) 563, 690, 767, 1003, 1007, 1073
BstDEI CTNAG 3 cut(s) 185, 981, 1025
BstDSI CCRYGG 4 cut(s) 168, 760, 779, 812
BstF5I GGATG 4 cut(s) 272, 358, 1252, 1282
BstFNI CGCG 5 cut(s) 692, 762, 826, 863, 971
BstH2I RGCGCY 1 cut(s) 689
BstHHI GCGC 1 cut(s) 688
BstKTI GATC 7 cut(s) 804, 893, 940, 987, 1225, 1282, 1288
BstMAI GTCTC 3 cut(s) 186, 801, 1096
BstMBI GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
BstMCI CGRYCG 3 cut(s) 779, 893, 1010
BstNSI RCATGY 1 cut(s) 1234
BstPAI GACNNNNGTC 1 cut(s) 827
BstSCI CCNGG 4 cut(s) 471, 472, 677, 678
BstSFI CTRYAG 1 cut(s) 639
BstSLI GKGCMC 1 cut(s) 906
BstUI CGCG 5 cut(s) 692, 762, 826, 863, 971
BstV2I GAAGAC 2 cut(s) 705, 827
BstZI CGGCCG 2 cut(s) 776, 1007
Bsu15I ATCGAT 1 cut(s) 987
BsuI GTATCC 1 cut(s) 1122
BsuRI GGCC 7 cut(s) 695, 778, 786, 904, 911, 1001, 1009
BsuTUI ATCGAT 1 cut(s) 987
BtgI CCRYGG 4 cut(s) 168, 760, 779, 812
BtrI CACGTC 1 cut(s) 1194
BtsCI GGATG 4 cut(s) 272, 358, 1252, 1282
BtsIMutI CAGTG 1 cut(s) 226
BveI ACCTGC 1 cut(s) 421
Cac8I GCNNGC 6 cut(s) 563, 690, 767, 1003, 1007, 1073
CciI TCATGA 1 cut(s) 94
CfoI GCGC 1 cut(s) 688
Cfr10I RCCGGY 4 cut(s) 574, 658, 1005, 1105
Cfr13I GGNCC 7 cut(s) 455, 694, 784, 840, 902, 903, 1052
Cfr42I CCGCGG 1 cut(s) 763
Cfr9I CCCGGG 2 cut(s) 472, 678
ClaI ATCGAT 1 cut(s) 987
CpoI CGGWCCG 1 cut(s) 1052
CseI GACGC 5 cut(s) 715, 832, 869, 977, 1174
Csp6I GTAC 1 cut(s) 441
CspAI ACCGGT 2 cut(s) 574, 1105
CspCI CAANNNNNGTGG 2 cut(s) 1124, 1159
CspI CGGWCCG 1 cut(s) 1052
CviAII CATG 8 cut(s) 95, 169, 244, 263, 271, 452, 666, 1231
CviQI GTAC 1 cut(s) 441
DdeI CTNAG 3 cut(s) 185, 981, 1025
DpnI GATC 7 cut(s) 803, 892, 939, 986, 1224, 1281, 1287
DpnII GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
DrdI GACNNNNNNGTC 1 cut(s) 1184
DriI GACNNNNNGTC 1 cut(s) 1058
DseDI GACNNNNNNGTC 1 cut(s) 1184
EaeI YGGCCR 2 cut(s) 776, 1007
EagI CGGCCG 2 cut(s) 776, 1007
Eam1105I GACNNNNNGTC 1 cut(s) 1058
EciI GGCGGA 2 cut(s) 841, 1252
Ecl136II GAGCTC 1 cut(s) 189
EclXI CGGCCG 2 cut(s) 776, 1007
Eco130I CCWWGG 2 cut(s) 168, 906
Eco24I GRGCYC 2 cut(s) 191, 906
Eco31I GGTCTC 2 cut(s) 801, 1096
Eco47I GGWCC 3 cut(s) 455, 840, 1052
Eco52I CGGCCG 2 cut(s) 776, 1007
Eco53kI GAGCTC 1 cut(s) 189
Eco57I CTGAAG 1 cut(s) 1030
Eco72I CACGTG 1 cut(s) 412
Eco88I CYCGRG 3 cut(s) 472, 678, 836
EcoICRI GAGCTC 1 cut(s) 189
EcoO109I RGGNCCY 2 cut(s) 840, 902
EcoRI GAATTC 1 cut(s) 11
EcoT14I CCWWGG 2 cut(s) 168, 906
EcoT22I ATGCAT 1 cut(s) 272
EcoT38I GRGCYC 2 cut(s) 191, 906
ErhI CCWWGG 2 cut(s) 168, 906
FaeI CATG 8 cut(s) 98, 172, 247, 266, 274, 455, 669, 1234
FalI AAGNNNNNCTT 2 cut(s) 905, 937
FaqI GGGAC 1 cut(s) 853
FatI CATG 8 cut(s) 94, 168, 243, 262, 270, 451, 665, 1230
FauI CCCGC 1 cut(s) 891
FbaI TGATCA 1 cut(s) 1279
FblI GTMKAC 1 cut(s) 608
FokI GGATG 4 cut(s) 279, 365, 1259, 1289
FriOI GRGCYC 2 cut(s) 191, 906
FspBI CTAG 3 cut(s) 32, 104, 459
GlaI GCGC 1 cut(s) 687
GsuI CTGGAG 1 cut(s) 1000
HaeII RGCGCY 1 cut(s) 689
HaeIII GGCC 7 cut(s) 695, 778, 786, 904, 911, 1001, 1009
HapII CCGG 9 cut(s) 473, 575, 659, 679, 1006, 1068, 1106, 1115, 1204
HgaI GACGC 5 cut(s) 715, 832, 869, 977, 1174
HhaI GCGC 1 cut(s) 688
Hin1I GRCGYC 1 cut(s) 707
Hin1II CATG 8 cut(s) 98, 172, 247, 266, 274, 455, 669, 1234
Hin6I GCGC 1 cut(s) 686
HinP1I GCGC 1 cut(s) 686
HincII GTYRAC 2 cut(s) 646, 1063
HindII GTYRAC 2 cut(s) 646, 1063
HinfI GANTC 9 cut(s) 254, 296, 530, 756, 789, 848, 994, 1040, 1148
HpaII CCGG 9 cut(s) 473, 575, 659, 679, 1006, 1068, 1106, 1115, 1204
HphI GGTGA 4 cut(s) 292, 596, 648, 1187
Hpy166II GTNNAC 4 cut(s) 447, 609, 646, 1063
Hpy188III TCNNGA 6 cut(s) 74, 95, 379, 838, 1204, 1283
Hpy8I GTNNAC 4 cut(s) 447, 609, 646, 1063
Hpy99I CGWCG 8 cut(s) 709, 721, 968, 971, 1040, 1166, 1169, 1198
HpyAV CCTTC 9 cut(s) 101, 165, 225, 328, 476, 504, 853, 1054, 1228
HpyCH4III ACNGT 2 cut(s) 1036, 1175
HpyCH4IV ACGT 5 cut(s) 119, 411, 443, 1193, 1272
HpyCH4V TGCA 9 cut(s) 270, 329, 356, 406, 571, 595, 617, 641, 669
HpyF3I CTNAG 3 cut(s) 185, 981, 1025
HpySE526I ACGT 5 cut(s) 119, 411, 443, 1193, 1272
Hsp92I GRCGYC 1 cut(s) 707
Hsp92II CATG 8 cut(s) 98, 172, 247, 266, 274, 455, 669, 1234
HspAI GCGC 1 cut(s) 686
Kpn2I TCCGGA 1 cut(s) 1203
KroI GCCGGC 1 cut(s) 1005
KroNI GCCGGC 1 cut(s) 1007
Ksp22I TGATCA 1 cut(s) 1279
KspI CCGCGG 1 cut(s) 763
Kzo9I GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
LweI GCATC 5 cut(s) 88, 257, 343, 671, 868
MaeI CTAG 3 cut(s) 32, 104, 459
MaeII ACGT 5 cut(s) 119, 411, 443, 1193, 1272
MaeIII GTNAC 3 cut(s) 110, 1145, 1175
MalI GATC 7 cut(s) 803, 892, 939, 986, 1224, 1281, 1287
MbiI CCGCTC 1 cut(s) 1301
MboI GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
MboII GAAGA 8 cut(s) 151, 499, 502, 705, 829, 832, 1146, 1280
MhlI GDGCHC 2 cut(s) 191, 906
MluCI AATT 3 cut(s) 11, 518, 546
MluI ACGCGT 1 cut(s) 824
MlyI GAGTC 4 cut(s) 263, 305, 1049, 1142
Mph1103I ATGCAT 1 cut(s) 272
MroI TCCGGA 1 cut(s) 1203
MroNI GCCGGC 1 cut(s) 1005
MseI TTAA 2 cut(s) 144, 426
MslI CAYNNNNRTG 1 cut(s) 248
MspA1I CMGCKG 4 cut(s) 635, 762, 1050, 1099
MspI CCGG 9 cut(s) 473, 575, 659, 679, 1006, 1068, 1106, 1115, 1204
MspR9I CCNGG 4 cut(s) 473, 474, 679, 680
MvnI CGCG 5 cut(s) 692, 762, 826, 863, 971
NaeI GCCGGC 1 cut(s) 1007
NciI CCSGG 4 cut(s) 473, 474, 679, 680
NcoI CCATGG 1 cut(s) 168
NdeII GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
NgoMIV GCCGGC 1 cut(s) 1005
NlaIII CATG 8 cut(s) 98, 172, 247, 266, 274, 455, 669, 1234
NlaIV GGNNCC 5 cut(s) 696, 785, 841, 903, 904
NmeAIII GCCGAG 2 cut(s) 823, 880
NmuCI GTSAC 3 cut(s) 110, 1145, 1175
NsiI ATGCAT 1 cut(s) 272
NspI RCATGY 1 cut(s) 1234
PagI TCATGA 1 cut(s) 94
PcsI WCGNNNNNNNCGW 4 cut(s) 305, 713, 843, 852
PdiI GCCGGC 1 cut(s) 1007
PfeI GAWTC 5 cut(s) 530, 756, 789, 848, 994
PflFI GACNNNGTC 2 cut(s) 459, 709
PflMI CCANNNNNTGG 1 cut(s) 349
PinAI ACCGGT 2 cut(s) 574, 1105
Ple19I CGATCG 1 cut(s) 893
PleI GAGTC 4 cut(s) 262, 304, 1048, 1142
PmaCI CACGTG 1 cut(s) 412
PmlI CACGTG 1 cut(s) 412
PpsI GAGTC 4 cut(s) 262, 304, 1048, 1142
Ppu21I YACGTR 1 cut(s) 412
PpuMI RGGWCCY 1 cut(s) 840
PshAI GACNNNNGTC 1 cut(s) 827
Psp124BI GAGCTC 1 cut(s) 191
Psp1406I AACGTT 1 cut(s) 119
Psp5II RGGWCCY 1 cut(s) 840
PspCI CACGTG 1 cut(s) 412
PspN4I GGNNCC 5 cut(s) 696, 785, 841, 903, 904
PspOMI GGGCCC 1 cut(s) 902
PspPI GGNCC 7 cut(s) 455, 694, 784, 840, 902, 903, 1052
PspPPI RGGWCCY 1 cut(s) 840
PstI CTGCAG 1 cut(s) 643
PsyI GACNNNGTC 2 cut(s) 459, 709
PvuI CGATCG 1 cut(s) 893
RsaI GTAC 1 cut(s) 442
RsaNI GTAC 1 cut(s) 441
RseI CAYNNNNRTG 1 cut(s) 248
Rsr2I CGGWCCG 1 cut(s) 1052
RsrII CGGWCCG 1 cut(s) 1052
SacI GAGCTC 1 cut(s) 191
SacII CCGCGG 1 cut(s) 763
SaqAI TTAA 2 cut(s) 144, 426
Sau3AI GATC 7 cut(s) 801, 890, 937, 984, 1222, 1279, 1285
Sau96I GGNCC 7 cut(s) 455, 694, 784, 840, 902, 903, 1052
SchI GAGTC 4 cut(s) 263, 305, 1049, 1142
ScrFI CCNGG 4 cut(s) 473, 474, 679, 680
SduI GDGCHC 2 cut(s) 191, 906
SfaNI GCATC 5 cut(s) 88, 257, 343, 671, 868
SfcI CTRYAG 1 cut(s) 639
Sfr303I CCGCGG 1 cut(s) 763
SgrBI CCGCGG 1 cut(s) 763
SinI GGWCC 3 cut(s) 455, 840, 1052
SmaI CCCGGG 2 cut(s) 474, 680
SmiMI CAYNNNNRTG 1 cut(s) 248
Sse9I AATT 3 cut(s) 11, 518, 546
SspMI CTAG 3 cut(s) 32, 104, 459
SstI GAGCTC 1 cut(s) 191
StyD4I CCNGG 4 cut(s) 471, 472, 677, 678
StyI CCWWGG 2 cut(s) 168, 906
TaaI ACNGT 2 cut(s) 1036, 1175
TaiI ACGT 5 cut(s) 122, 414, 446, 1196, 1275
TaqI TCGA 7 cut(s) 315, 378, 846, 987, 1038, 1167, 1221
TaqII GACCGA 1 cut(s) 1069
TasI AATT 3 cut(s) 11, 518, 546
TfiI GAWTC 5 cut(s) 530, 756, 789, 848, 994
Tru1I TTAA 2 cut(s) 144, 426
Tru9I TTAA 2 cut(s) 144, 426
TscAI CASTG 1 cut(s) 226
TseFI GTSAC 3 cut(s) 110, 1145, 1175
Tsp45I GTSAC 3 cut(s) 110, 1145, 1175
TspDTI ATGAA 3 cut(s) 66, 83, 1100
TspGWI ACGGA 1 cut(s) 1150
TspMI CCCGGG 2 cut(s) 472, 678
TspRI CASTG 1 cut(s) 226
Tth111I GACNNNGTC 2 cut(s) 459, 709
Van91I CCANNNNNTGG 1 cut(s) 349
VpaK11BI GGWCC 3 cut(s) 455, 840, 1052
XapI RAATTY 1 cut(s) 11
XceI RCATGY 1 cut(s) 1234
XmaI CCCGGG 2 cut(s) 472, 678
XmiI GTMKAC 1 cut(s) 608
XspI CTAG 3 cut(s) 32, 104, 459
Zsp2I ATGCAT 1 cut(s) 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.