RLG00000021431

Stress-induced protein KIN2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0003106
Physical Location & Seq
Forward (+)
75352096 .. 75352641
546 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021431

Sequence Viewer

Length: 336 bp
ATGGATAACTCGCAGAAGATGAGCTACAACGCCGGTGTGGCCAAGGGCCAAACTCAGGAGAAGGCCAACACCATGATGGAAAAGGCCGGGAATGTTGCACAGTCCGCCAAGGAATCGATACAGAATGCTGGCCAAGTGGATAACTCGCAGAAGATGAGCTACAACGCCGGTGTGGCCAAGGGCCAAACTCAGGAGAAGGCCAGCACCATGATGGGCAAGGCCGGGAATGTTGCACAGTCCGCCAAGGAATCGATGCAGAATGCTGGCCAAGCTATTCAGCAAACGGCTGCGGGAGCTGCTGACGCCGTCAAGAATGCTACTGGCATGAACAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

112

Amino Acids

11.43

Weight (kDa)

9.44

Isoelectric Point (pI)

34.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 105, 240, 290
AcoI YGGCCR 4 cut(s) 39, 130, 174, 265
AcyI GRCGYC 1 cut(s) 303
AfiI CCNNNNNNNGG 2 cut(s) 55, 190
AluBI AGCT 4 cut(s) 24, 159, 272, 296
AluI AGCT 4 cut(s) 24, 159, 272, 296
ApeKI GCWGC 2 cut(s) 287, 296
AspS9I GGNCC 2 cut(s) 46, 181
AsuC2I CCSGG 2 cut(s) 88, 223
BalI TGGCCA 4 cut(s) 41, 132, 176, 267
BarI GAAGNNNNNNTAC 4 cut(s) 8, 40, 143, 175
BbvI GCAGC 2 cut(s) 274, 283
BccI CCATC 2 cut(s) 70, 205
BceAI ACGGC 2 cut(s) 290, 300
BcnI CCSGG 2 cut(s) 88, 223
BglI GCCNNNNNGGC 2 cut(s) 38, 173
BisI GCNGC 2 cut(s) 288, 297
BlsI GCNGC 2 cut(s) 289, 298
Bme1390I CCNGG 2 cut(s) 88, 223
BmgT120I GGNCC 2 cut(s) 46, 181
BmrFI CCNGG 2 cut(s) 88, 223
BmsI GCATC 1 cut(s) 243
BpuMI CCSGG 2 cut(s) 88, 223
Bsa29I ATCGAT 2 cut(s) 116, 251
BsaHI GRCGYC 1 cut(s) 303
BsaJI CCNNGG 4 cut(s) 42, 108, 177, 243
Bsc4I CCNNNNNNNGG 2 cut(s) 55, 190
Bse118I RCCGGY 2 cut(s) 32, 167
Bse1I ACTGG 1 cut(s) 325
BseCI ATCGAT 2 cut(s) 116, 251
BseDI CCNNGG 4 cut(s) 42, 108, 177, 243
BseLI CCNNNNNNNGG 2 cut(s) 55, 190
BseMII CTCAG 2 cut(s) 68, 203
BseNI ACTGG 1 cut(s) 325
BseXI GCAGC 2 cut(s) 274, 283
BshVI ATCGAT 2 cut(s) 116, 251
BsiSI CCGG 4 cut(s) 33, 87, 168, 222
BslI CCNNNNNNNGG 2 cut(s) 55, 190
BsmI GAATGC 3 cut(s) 130, 265, 319
BspACI CCGC 3 cut(s) 105, 240, 290
BspCNI CTCAG 2 cut(s) 67, 202
BspDI ATCGAT 2 cut(s) 116, 251
BsrFI RCCGGY 2 cut(s) 32, 167
BsrI ACTGG 1 cut(s) 325
BssAI RCCGGY 2 cut(s) 32, 167
BssECI CCNNGG 4 cut(s) 42, 108, 177, 243
BssNI GRCGYC 1 cut(s) 303
BssT1I CCWWGG 4 cut(s) 42, 108, 177, 243
Bst4CI ACNGT 2 cut(s) 102, 237
BstACI GRCGYC 1 cut(s) 303
BstC8I GCNNGC 3 cut(s) 130, 202, 265
BstDEI CTNAG 2 cut(s) 54, 189
BstMWI GCNNNNNNNGC 8 cut(s) 38, 104, 173, 239, 269, 293, 296, 302
BstSCI CCNGG 2 cut(s) 86, 221
BstV1I GCAGC 2 cut(s) 274, 283
Bsu15I ATCGAT 2 cut(s) 116, 251
BsuTUI ATCGAT 2 cut(s) 116, 251
Cac8I GCNNGC 3 cut(s) 130, 202, 265
Cfr10I RCCGGY 2 cut(s) 32, 167
Cfr13I GGNCC 2 cut(s) 46, 181
ClaI ATCGAT 2 cut(s) 116, 251
CseI GACGC 1 cut(s) 311
CviAII CATG 3 cut(s) 73, 208, 325
DdeI CTNAG 2 cut(s) 54, 189
EaeI YGGCCR 4 cut(s) 39, 130, 174, 265
EciI GGCGGA 2 cut(s) 94, 229
Eco130I CCWWGG 4 cut(s) 42, 108, 177, 243
EcoT14I CCWWGG 4 cut(s) 42, 108, 177, 243
ErhI CCWWGG 4 cut(s) 42, 108, 177, 243
FaeI CATG 3 cut(s) 76, 211, 328
FaiI YATR 3 cut(s) 74, 209, 326
FatI CATG 3 cut(s) 72, 207, 324
FauI CCCGC 1 cut(s) 283
Fnu4HI GCNGC 2 cut(s) 288, 297
Fsp4HI GCNGC 2 cut(s) 288, 297
GluI GCNGC 2 cut(s) 288, 297
HapII CCGG 4 cut(s) 33, 87, 168, 222
HgaI GACGC 1 cut(s) 311
Hin1I GRCGYC 1 cut(s) 303
Hin1II CATG 3 cut(s) 76, 211, 328
HinfI GANTC 2 cut(s) 113, 248
HpaII CCGG 4 cut(s) 33, 87, 168, 222
Hpy188III TCNNGA 3 cut(s) 56, 191, 310
HpyAV CCTTC 2 cut(s) 55, 190
HpyCH4III ACNGT 2 cut(s) 102, 237
HpyCH4V TGCA 3 cut(s) 98, 233, 256
HpyF10VI GCNNNNNNNGC 8 cut(s) 38, 104, 173, 239, 269, 293, 296, 302
HpyF3I CTNAG 2 cut(s) 54, 189
Hsp92I GRCGYC 1 cut(s) 303
Hsp92II CATG 3 cut(s) 76, 211, 328
LmnI GCTCC 1 cut(s) 293
Lsp1109I GCAGC 2 cut(s) 274, 283
LweI GCATC 1 cut(s) 243
MboII GAAGA 2 cut(s) 28, 163
MlsI TGGCCA 4 cut(s) 41, 132, 176, 267
MluNI TGGCCA 4 cut(s) 41, 132, 176, 267
Mox20I TGGCCA 4 cut(s) 41, 132, 176, 267
MscI TGGCCA 4 cut(s) 41, 132, 176, 267
MslI CAYNNNNRTG 2 cut(s) 74, 209
Msp20I TGGCCA 4 cut(s) 41, 132, 176, 267
MspI CCGG 4 cut(s) 33, 87, 168, 222
MspR9I CCNGG 2 cut(s) 88, 223
Mva1269I GAATGC 3 cut(s) 130, 265, 319
MwoI GCNNNNNNNGC 8 cut(s) 38, 104, 173, 239, 269, 293, 296, 302
NciI CCSGG 2 cut(s) 88, 223
NlaIII CATG 3 cut(s) 76, 211, 328
PctI GAATGC 3 cut(s) 130, 265, 319
PfeI GAWTC 2 cut(s) 113, 248
PflFI GACNNNGTC 1 cut(s) 305
PkrI GCNGC 2 cut(s) 289, 298
PspPI GGNCC 2 cut(s) 46, 181
PsyI GACNNNGTC 1 cut(s) 305
RseI CAYNNNNRTG 2 cut(s) 74, 209
SatI GCNGC 2 cut(s) 288, 297
Sau96I GGNCC 2 cut(s) 46, 181
ScrFI CCNGG 2 cut(s) 88, 223
SetI ASST 4 cut(s) 26, 161, 274, 298
SfaNI GCATC 1 cut(s) 243
SgrAI CRCCGGYG 2 cut(s) 32, 167
SmiMI CAYNNNNRTG 2 cut(s) 74, 209
SsiI CCGC 3 cut(s) 105, 240, 290
StyD4I CCNGG 2 cut(s) 86, 221
StyI CCWWGG 4 cut(s) 42, 108, 177, 243
TaaI ACNGT 2 cut(s) 102, 237
TaqI TCGA 2 cut(s) 116, 251
TfiI GAWTC 2 cut(s) 113, 248
TseI GCWGC 2 cut(s) 287, 296
Tth111I GACNNNGTC 1 cut(s) 305
XcmI CCANNNNNNNNNTGG 2 cut(s) 73, 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.