Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003106

Physical Location & Seq

Genomic Coordinates Forward (+)

63744223 .. 63747942

Gene Structure 3720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0506000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGAAGTTAACAAAGAGGAGGCCCTTAAGGCGAAAGAGATCGCTGAGAAGCGATTTGCTGACAAGGACTATATAAATGCTATGAATTATGCAGTGAAGGCAAAATCACTCAATCCGGAACTGGAGGGCATAGCTCAAATGGTTGCCACATTTGAAGTTTATGCCGCTACCGAGTACAGATTCTGTGGTGAAATAGATCATTATTCGATTCTTGGGTTGAAGCCCACCTCAAGTAAAGATGCAGTGAAGAAGCAGTATAAGAAGATGGCTGTGTTGCTCCACCCTGATAAGAACAAATGTGTGGGAGCTGATGGCGCTTTCAAACTTGTCTCCGAAGCATGGACCTTGTTGTCTGACACTACCAAGAGAGGCTTTTATGATCTTCAGAGAAACAAGCACTTGGCAACTGCAGTTAATCAACCAAATTACTCTACAGTTCATGCTGGTGGGGTTATGACATCTCATGGTAGACTTGACACTTTCTGGACCGTTTGCACTTCTTGCAAGGTTCAGTATGAGTATCTCCGGAAATATGTCAACAAAAGACTTTCGTGTAAGAACTGTCGAGGTGTTTTCATTGCTGTGGAATCTGGGGCAGCCCCAGCAAATGGCTCCTTCCCCTATACTCCTTGGCCATATCCTAATAATGGGCATTCAAATCATGGGGTTACCTATGTTCCAAACAACGGTACCTTGTTCCCAGCAAATGGTGCCCCTGGATTTCATACTGGACATGCATATGACTATATTTCAAATGTGTCATTTCAGTGGAGCTCATATTCTGGAACTTCTGCTGGAGTTGTCAGCCCTCACGGGTCCTCATCAGCTGTAACCTCTGATGTTGTTTATCAGGCAAATGGAAAGGTTAAGAAAGCTGGAGCAAAACCCAAATTGAGAGTGAATGGAAAACGTTCCATAAAAAATGCTGTGGTTAATGTGGATTTGAATGTGTCTGCTAGCTATGATGAACATCCCAAAATCAAGCGTAATGGACCTGAGAAAAAAAGGAAACTTCTTGTTGGAGCAACTTTTAGAGTCGGGGATCACGACAGAGTATCAAAATCTGCTTCAGAAGCAATCCTAGCAAATGGAAATGGCAGCATTGGGCATGATCAGAAAGTTCCTAGTTCAGCAGACGTTCCCACCAGACGATGCTCCACGGCACCAGCCTTTGATGCTAGGAAGATGTTGATCGAGAAGGCGAGAACGGAAATCTCGAAGAAATTAGAAGAGATGAAGTTGGCTACAGAAGCTGCTGCTGCTGCTGCTGCAGTAAAGAACACAAAAAAGCATGTTGAAGTTGTAGTCACTGCTGCTTCACTAAAGAAAACAAAAAGGCATGCTGAAGTTGAAGTGGCTGCTGCTTCACTAAAGAAAACAAAAAGACGTGTTGGAGTGGGTCAATCTGGAGGAGCTCCAGGGCATCAATTAGAGACAAAGAAAAGTGAGCCACACTTCCATAGAGACCCTGAGCCCCAAAACATGCCAGTCCCTGACTCTGACTTCCACAATTTTGACGAAGATAGGTCAGAGGAATGTTTTAAGCCAAAGCAAATATGGGCTTTATATGATGAAGATGGCATGCCTCGGTTGTACTGTCTGGTACGTGAAGTGGTCTCAGTCAAACCATTTAAGTTGCTCATTACTTACTTGAGCTCTAAAACTGATAGTGAATTCGGGCCCGTGAACTGGCTGGATAGCGGGTTCACCAAGTCCTGTGGAAATTTCAGAGCTCGACACCTTGATGTCGTTGAGCATGTTAACATATTCTCTCATATTTTGAGCCGCACGAAAGCAGCTAGAGGAGGTATTGTTCAGATATACCCAAAAAGTGGGGATATCTGGGCTCTGTATCGGAATTGGTCAAAAGATTGGGATAGTTCAACTCCAGATGAAGTGAGGCACCAATATCAAATGGTGGAGGTTCTTGATGATTACTCGGAAGAGATTGGTGTTTGCGTCTCTCCCCTTTTGAAGCTGGCTGGATTTAGGTCAGTGTACCAGACTGATACGGATAGAAGCGCCATTCTATGGATTCCAAGAAGAGAGATGTTACGCTTTTCTCACCAGGTGCCCGCATGGTTACTCAACGGAGAAGGGACTAACCTACCTGGTAAGTGTTGGGATCTGGATCCTGCTGCAACTCCAGAAGGACTGCTTAATGCTGCAACTCCAGATGAGCAGCTTCATGCTGCAGCGCCAGACGAGCTACCTCATGCTGCAACAAGAGACGAGCTGCTTCATGCTGCTGCAACTCCAGATGAGATGATTCATGCTGCTATGGAAGCTGAGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

765

Amino Acids

84.48

Weight (kDa)

8.8

Isoelectric Point (pI)

38.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	66 - 127	5.4e-19	DnaJ domain
Zn_ribbon_20	PF23551	161 - 195	1.1e-13	Zinc beta-ribbon domain
DUF3444	PF11926	492 - 699	4.4e-73	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003106)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38760 AT5G53820
fragaria_vesca	FvH4_6g45800 FvH4_6g45800 FvH4_6g45802
malus_domestica	MD09G1079600.v1.1 MD17G1070100.v1.1
prunus_persica	Prupe.3G244100_v2.0.a1 Prupe.3G244200_v2.0.a1 Prupe.3G244200_v2.0.a1 Prupe.3G244300_v2.0.a1 Prupe.3G244400_v2.0.a1 Prupe.3G244500_v2.0.a1 Prupe.3G244600_v2.0.a1 Prupe.3G244700_v2.0.a1
pyrus_communis	pycom09g00640 pycom17g07010
rosa_chinensis	RchiOBHm_Chr2g0163981 RchiOBHm_Chr2g0163991 RchiOBHm_Chr2g0164011
rosa_laevigata	RLG00000021431
rosa_multiflora	Rmu_ssc0000432.1_g000017
rosa_roxburghii	Rroxscaffold_2G00086860 Rroxscaffold_2G00086870
rosa_rugosa	Rorug02G0505900 Rorug02G0506000 Rorug02G0506100
rosa_samantha	Rh2AG574000 Rh2AG574200 Rh2BG584800 Rh2BG584900 Rh2CG555700 Rh2CG555800 Rh2DG594100 Rh2DG594300
rosa_wichuraiana	Rw2G047480 Rw2G047490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	349
Acc65I	GGTACC	1 cut(s)	689
AccB1I	GGYRCC	5 cut(s)	689, 710, 1162, 1902, 2071
AccB7I	CCANNNNNTGG	4 cut(s)	608, 707, 1832, 2031
AccI	GTMKAC	1 cut(s)	469
AccIII	TCCGGA	2 cut(s)	115, 525
AciI	CCGC	4 cut(s)	165, 1701, 1786, 2076
AclI	AACGTT	1 cut(s)	910
AclWI	GGATC	4 cut(s)	1050, 2126, 2133, 2139
AcoI	YGGCCR	1 cut(s)	632
AcsI	RAATTY	2 cut(s)	1673, 1723
AcuI	CTGAAG	3 cut(s)	368, 1053, 1365
AdeI	CACNNNGTG	1 cut(s)	2071
AfaI	GTAC	5 cut(s)	176, 691, 1595, 1605, 2000
AfiI	CCNNNNNNNGG	8 cut(s)	339, 608, 647, 686, 707, 1689, 1832, 2031
AflII	CTTAAG	1 cut(s)	26
AflIII	ACRYGT	1 cut(s)	1387
AjiI	CACGTC	1 cut(s)	1388
AjnI	CCWGG	4 cut(s)	715, 1417, 2067, 2110
AloI	GAACNNNNNNTCC	4 cut(s)	1688, 1720, 1797, 1829
Alw21I	GWGCWC	4 cut(s)	776, 1417, 1658, 1735
Alw26I	GTCTC	6 cut(s)	334, 1427, 1458, 1621, 1966, 2223
AlwI	GGATC	4 cut(s)	1050, 2126, 2133, 2139
AlwNI	CAGNNNCTG	3 cut(s)	183, 1253, 1493
Aor13HI	TCCGGA	2 cut(s)	115, 525
AoxI	GGCC	3 cut(s)	21, 632, 1679
ApaI	GGGCCC	1 cut(s)	1683
ApoI	RAATTY	2 cut(s)	1673, 1723
Asp700I	GAANNNNTTC	1 cut(s)	910
Asp718I	GGTACC	1 cut(s)	689
AspLEI	GCGC	3 cut(s)	317, 2024, 2200
AspS9I	GGNCC	7 cut(s)	22, 342, 486, 816, 992, 1679, 1680
AsuHPI	GGTGA	3 cut(s)	200, 1699, 2057
AsuNHI	GCTAGC	1 cut(s)	956
AvaII	GGWCC	4 cut(s)	342, 486, 816, 992
BaeGI	GKGCMC	3 cut(s)	715, 1683, 2076
BaeI	ACNNNNGTAYC	2 cut(s)	673, 706
BalI	TGGCCA	1 cut(s)	634
BamHI	GGATCC	1 cut(s)	2131
BanI	GGYRCC	5 cut(s)	689, 710, 1162, 1902, 2071
BanII	GRGCYC	7 cut(s)	776, 1417, 1476, 1658, 1683, 1735, 1849
Bbv12I	GWGCWC	4 cut(s)	776, 1417, 1658, 1735
BbvCI	CCTCAGC	1 cut(s)	2289
BccI	CCATC	3 cut(s)	259, 305, 1571
BceAI	ACGGC	1 cut(s)	1176
BciT130I	CCWGG	4 cut(s)	717, 1419, 2069, 2112
BclI	TGATCA	1 cut(s)	1111
BcoDI	GTCTC	6 cut(s)	334, 1427, 1458, 1621, 1966, 2223
BfaI	CTAG	5 cut(s)	957, 1082, 1125, 1179, 1800
BfmI	CTRYAG	5 cut(s)	408, 432, 1245, 1269, 2193
BfoI	RGCGCY	3 cut(s)	318, 2025, 2201
BfrI	CTTAAG	1 cut(s)	26
BglI	GCCNNNNNGGC	1 cut(s)	29
Bme1390I	CCNGG	4 cut(s)	717, 1419, 2069, 2112
Bme18I	GGWCC	4 cut(s)	342, 486, 816, 992
BmgBI	CACGTC	1 cut(s)	1388
BmgT120I	GGNCC	7 cut(s)	22, 342, 486, 816, 992, 1679, 1680
BmiI	GGNNCC	9 cut(s)	613, 691, 712, 817, 1164, 1681, 1904, 2073, 2133
BmrFI	CCNGG	4 cut(s)	717, 1419, 2069, 2112
BmsI	GCATC	4 cut(s)	229, 1142, 1165, 1432
BmtI	GCTAGC	1 cut(s)	960
BpmI	CTGGAG	9 cut(s)	143, 816, 897, 1401, 1428, 1872, 2130, 2157, 2241
Bpu10I	CCTNAGC	2 cut(s)	1470, 2289
BpuEI	CTTGAG	2 cut(s)	214, 1672
BsaAI	YACGTR	1 cut(s)	1607
BsaBI	GATNNNNATC	3 cut(s)	969, 1190, 2130
BsaI	GGTCTC	2 cut(s)	1458, 1621
BsaJI	CCNNGG	5 cut(s)	629, 715, 1158, 1418, 1586
BsaWI	WCCGGW	2 cut(s)	115, 525
BsaXI	ACNNNNNCTCC	2 cut(s)	1797, 1827
Bsc4I	CCNNNNNNNGG	8 cut(s)	339, 608, 647, 686, 707, 1689, 1832, 2031
Bse1I	ACTGG	4 cut(s)	126, 733, 1487, 1694
Bse3DI	GCAATG	1 cut(s)	576
Bse8I	GATNNNNATC	3 cut(s)	969, 1190, 2130
BseAI	TCCGGA	2 cut(s)	115, 525
BseBI	CCWGG	4 cut(s)	717, 1419, 2069, 2112
BseDI	CCNNGG	5 cut(s)	629, 715, 1158, 1418, 1586
BseGI	GGATG	1 cut(s)	970
BseJI	GATNNNNATC	3 cut(s)	969, 1190, 2130
BseLI	CCNNNNNNNGG	8 cut(s)	339, 608, 647, 686, 707, 1689, 1832, 2031
BseMI	GCAATG	1 cut(s)	576
BseMII	CTCAG	5 cut(s)	36, 987, 1461, 1632, 2280
BseNI	ACTGG	4 cut(s)	126, 733, 1487, 1694
BseRI	GAGGAG	3 cut(s)	32, 1425, 1818
BseSI	GKGCMC	3 cut(s)	715, 1683, 2076
BseYI	CCCAGC	2 cut(s)	601, 700
BshFI	GGCC	3 cut(s)	23, 634, 1681
BshNI	GGYRCC	5 cut(s)	689, 710, 1162, 1902, 2071
BsiHKAI	GWGCWC	4 cut(s)	776, 1417, 1658, 1735
BsiSI	CCGG	2 cut(s)	116, 526
BslFI	GGGAC	2 cut(s)	1475, 2113
BslI	CCNNNNNNNGG	8 cut(s)	339, 608, 647, 686, 707, 1689, 1832, 2031
BsmAI	GTCTC	6 cut(s)	334, 1427, 1458, 1621, 1966, 2223
BsmBI	CGTCTC	2 cut(s)	1966, 2223
BsmFI	GGGAC	2 cut(s)	1475, 2113
BsmI	GAATGC	1 cut(s)	652
BsnI	GGCC	3 cut(s)	23, 634, 1681
Bso31I	GGTCTC	2 cut(s)	1458, 1621
Bsp120I	GGGCCC	1 cut(s)	1679
Bsp1286I	GDGCHC	9 cut(s)	715, 776, 1417, 1476, 1658, 1683, 1735, 1849, 2076
Bsp13I	TCCGGA	2 cut(s)	115, 525
Bsp143I	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
BspACI	CCGC	4 cut(s)	165, 1701, 1786, 2076
BspANI	GGCC	3 cut(s)	23, 634, 1681
BspCNI	CTCAG	5 cut(s)	37, 988, 1462, 1631, 2281
BspEI	TCCGGA	2 cut(s)	115, 525
BspLI	GGNNCC	9 cut(s)	613, 691, 712, 817, 1164, 1681, 1904, 2073, 2133
BspMAI	CTGCAG	3 cut(s)	412, 1273, 2197
BspOI	GCTAGC	1 cut(s)	960
BspPI	GGATC	4 cut(s)	1050, 2126, 2133, 2139
BspT107I	GGYRCC	5 cut(s)	689, 710, 1162, 1902, 2071
BspTI	CTTAAG	1 cut(s)	26
BspTNI	GGTCTC	2 cut(s)	1458, 1621
BsrDI	GCAATG	1 cut(s)	576
BsrI	ACTGG	4 cut(s)	126, 733, 1487, 1694
BssECI	CCNNGG	5 cut(s)	629, 715, 1158, 1418, 1586
BssMI	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
BssT1I	CCWWGG	1 cut(s)	629
Bst2UI	CCWGG	4 cut(s)	717, 1419, 2069, 2112
Bst4CI	ACNGT	5 cut(s)	436, 490, 563, 689, 1598
Bst6I	CTCTTC	3 cut(s)	1224, 1938, 2038
BstAFI	CTTAAG	1 cut(s)	26
BstAPI	GCANNNNNTGC	2 cut(s)	501, 710
BstBAI	YACGTR	1 cut(s)	1607
BstC8I	GCNNGC	5 cut(s)	958, 1341, 1583, 1980, 2076
BstDEI	CTNAG	5 cut(s)	45, 996, 1470, 1618, 2289
BstDSI	CCRYGG	1 cut(s)	1158
BstEII	GGTNACC	1 cut(s)	667
BstF5I	GGATG	1 cut(s)	970
BstH2I	RGCGCY	3 cut(s)	318, 2025, 2201
BstHHI	GCGC	3 cut(s)	317, 2024, 2200
BstKTI	GATC	8 cut(s)	42, 199, 382, 1045, 1114, 1194, 2128, 2134
BstMAI	GTCTC	6 cut(s)	334, 1427, 1458, 1621, 1966, 2223
BstMBI	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
BstNI	CCWGG	4 cut(s)	717, 1419, 2069, 2112
BstNSI	RCATGY	6 cut(s)	737, 1295, 1343, 1486, 1585, 1760
BstPI	GGTNACC	1 cut(s)	667
BstSCI	CCNGG	4 cut(s)	715, 1417, 2067, 2110
BstSFI	CTRYAG	5 cut(s)	408, 432, 1245, 1269, 2193
BstSLI	GKGCMC	3 cut(s)	715, 1683, 2076
BstX2I	RGATCY	2 cut(s)	2125, 2131
BstYI	RGATCY	2 cut(s)	2125, 2131
BsuRI	GGCC	3 cut(s)	23, 634, 1681
BtgI	CCRYGG	1 cut(s)	1158
BtrI	CACGTC	1 cut(s)	1388
BtsCI	GGATG	1 cut(s)	970
BtsI	GCAGTG	3 cut(s)	99, 249, 1308
BtsIMutI	CAGTG	5 cut(s)	99, 249, 773, 1308, 2001
Cac8I	GCNNGC	5 cut(s)	958, 1341, 1583, 1980, 2076
CaiI	CAGNNNCTG	3 cut(s)	183, 1253, 1493
CfoI	GCGC	3 cut(s)	317, 2024, 2200
Cfr13I	GGNCC	7 cut(s)	22, 342, 486, 816, 992, 1679, 1680
CseI	GACGC	1 cut(s)	1948
CsiI	ACCWGGT	2 cut(s)	2067, 2110
Csp6I	GTAC	5 cut(s)	175, 690, 1594, 1604, 1999
CspCI	CAANNNNNGTGG	2 cut(s)	1699, 1734
CviQI	GTAC	5 cut(s)	175, 690, 1594, 1604, 1999
DdeI	CTNAG	5 cut(s)	45, 996, 1470, 1618, 2289
DpnI	GATC	8 cut(s)	41, 198, 381, 1044, 1113, 1193, 2127, 2133
DpnII	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
DraIII	CACNNNGTG	1 cut(s)	2071
DrdI	GACNNNNNNGTC	1 cut(s)	349
DseDI	GACNNNNNNGTC	1 cut(s)	349
EaeI	YGGCCR	1 cut(s)	632
Eam1104I	CTCTTC	3 cut(s)	1224, 1938, 2038
EarI	CTCTTC	3 cut(s)	1224, 1938, 2038
Ecl136II	GAGCTC	4 cut(s)	774, 1415, 1656, 1733
Eco130I	CCWWGG	1 cut(s)	629
Eco24I	GRGCYC	7 cut(s)	776, 1417, 1476, 1658, 1683, 1735, 1849
Eco31I	GGTCTC	2 cut(s)	1458, 1621
Eco32I	GATATC	1 cut(s)	1840
Eco47I	GGWCC	4 cut(s)	342, 486, 816, 992
Eco53kI	GAGCTC	4 cut(s)	774, 1415, 1656, 1733
Eco57I	CTGAAG	3 cut(s)	368, 1053, 1365
Eco91I	GGTNACC	1 cut(s)	667
EcoICRI	GAGCTC	4 cut(s)	774, 1415, 1656, 1733
EcoO109I	RGGNCCY	2 cut(s)	22, 816
EcoO65I	GGTNACC	1 cut(s)	667
EcoRI	GAATTC	1 cut(s)	1673
EcoRII	CCWGG	4 cut(s)	715, 1417, 2067, 2110
EcoRV	GATATC	1 cut(s)	1840
EcoT14I	CCWWGG	1 cut(s)	629
EcoT22I	ATGCAT	1 cut(s)	739
EcoT38I	GRGCYC	7 cut(s)	776, 1417, 1476, 1658, 1683, 1735, 1849
ErhI	CCWWGG	1 cut(s)	629
Esp3I	CGTCTC	2 cut(s)	1966, 2223
FalI	AAGNNNNNCTT	4 cut(s)	356, 388, 2142, 2174
FaqI	GGGAC	2 cut(s)	1475, 2113
FauI	CCCGC	2 cut(s)	1694, 2083
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	1111
FblI	GTMKAC	1 cut(s)	469
FokI	GGATG	1 cut(s)	957
FriOI	GRGCYC	7 cut(s)	776, 1417, 1476, 1658, 1683, 1735, 1849
FspBI	CTAG	5 cut(s)	957, 1082, 1125, 1179, 1800
GlaI	GCGC	3 cut(s)	316, 2023, 2199
GsaI	CCCAGC	2 cut(s)	605, 704
GsuI	CTGGAG	9 cut(s)	143, 816, 897, 1401, 1428, 1872, 2130, 2157, 2241
HaeII	RGCGCY	3 cut(s)	318, 2025, 2201
HaeIII	GGCC	3 cut(s)	23, 634, 1681
HapII	CCGG	2 cut(s)	116, 526
HgaI	GACGC	1 cut(s)	1948
HhaI	GCGC	3 cut(s)	317, 2024, 2200
Hin6I	GCGC	3 cut(s)	315, 2022, 2198
HinP1I	GCGC	3 cut(s)	315, 2022, 2198
HincII	GTYRAC	3 cut(s)	10, 538, 1762
HindII	GTYRAC	3 cut(s)	10, 538, 1762
HinfI	GANTC	7 cut(s)	180, 208, 587, 1035, 1496, 2035, 2269
HpaI	GTTAAC	2 cut(s)	10, 1762
HpaII	CCGG	2 cut(s)	116, 526
HphI	GGTGA	3 cut(s)	200, 1699, 2057
Hpy166II	GTNNAC	7 cut(s)	10, 470, 538, 1687, 1707, 1762, 1999
Hpy8I	GTNNAC	7 cut(s)	10, 470, 538, 1687, 1707, 1762, 1999
HpyAV	CCTTC	5 cut(s)	91, 625, 1192, 2090, 2144
HpyCH4III	ACNGT	5 cut(s)	436, 490, 563, 689, 1598
HpyCH4IV	ACGT	4 cut(s)	910, 1137, 1387, 1606
HpyF3I	CTNAG	5 cut(s)	45, 996, 1470, 1618, 2289
HpySE526I	ACGT	4 cut(s)	910, 1137, 1387, 1606
HspAI	GCGC	3 cut(s)	315, 2022, 2198
Kpn2I	TCCGGA	2 cut(s)	115, 525
KpnI	GGTACC	1 cut(s)	693
Ksp22I	TGATCA	1 cut(s)	1111
KspAI	GTTAAC	2 cut(s)	10, 1762
Kzo9I	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
LmnI	GCTCC	9 cut(s)	282, 305, 617, 771, 878, 1022, 1160, 1412, 1420
LweI	GCATC	4 cut(s)	229, 1142, 1165, 1432
MabI	ACCWGGT	2 cut(s)	2067, 2110
MaeI	CTAG	5 cut(s)	957, 1082, 1125, 1179, 1800
MaeII	ACGT	4 cut(s)	910, 1137, 1387, 1606
MaeIII	GTNAC	5 cut(s)	667, 829, 1306, 2052, 2082
MalI	GATC	8 cut(s)	41, 198, 381, 1044, 1113, 1193, 2127, 2133
MboI	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
MflI	RGATCY	2 cut(s)	2125, 2131
MhlI	GDGCHC	9 cut(s)	715, 776, 1417, 1476, 1658, 1683, 1735, 1849, 2076
MlsI	TGGCCA	1 cut(s)	634
MluCI	AATT	9 cut(s)	85, 424, 890, 1223, 1427, 1510, 1673, 1723, 1858
MluNI	TGGCCA	1 cut(s)	634
MlyI	GAGTC	2 cut(s)	1044, 1490
MmeI	TCCRAC	2 cut(s)	1000, 1372
Mox20I	TGGCCA	1 cut(s)	634
Mph1103I	ATGCAT	1 cut(s)	739
MroI	TCCGGA	2 cut(s)	115, 525
MroXI	GAANNNNTTC	1 cut(s)	910
MscI	TGGCCA	1 cut(s)	634
MslI	CAYNNNNRTG	5 cut(s)	444, 581, 738, 766, 1743
Msp20I	TGGCCA	1 cut(s)	634
MspA1I	CMGCKG	1 cut(s)	827
MspCI	CTTAAG	1 cut(s)	26
MspI	CCGG	2 cut(s)	116, 526
MspR9I	CCNGG	4 cut(s)	717, 1419, 2069, 2112
Mva1269I	GAATGC	1 cut(s)	652
MvaI	CCWGG	4 cut(s)	717, 1419, 2069, 2112
NdeI	CATATG	1 cut(s)	739
NdeII	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
NheI	GCTAGC	1 cut(s)	956
NlaIV	GGNNCC	9 cut(s)	613, 691, 712, 817, 1164, 1681, 1904, 2073, 2133
NmuCI	GTSAC	1 cut(s)	1306
NsiI	ATGCAT	1 cut(s)	739
NspI	RCATGY	6 cut(s)	737, 1295, 1343, 1486, 1585, 1760
PaeI	GCATGC	2 cut(s)	1343, 1585
PcsI	WCGNNNNNNNCGW	2 cut(s)	1044, 1214
PctI	GAATGC	1 cut(s)	652
PdmI	GAANNNNTTC	1 cut(s)	910
PfeI	GAWTC	5 cut(s)	180, 208, 587, 2035, 2269
PflMI	CCANNNNNTGG	4 cut(s)	608, 707, 1832, 2031
PleI	GAGTC	2 cut(s)	1043, 1490
PpsI	GAGTC	2 cut(s)	1043, 1490
Ppu21I	YACGTR	1 cut(s)	1607
PpuMI	RGGWCCY	1 cut(s)	816
Psp124BI	GAGCTC	4 cut(s)	776, 1417, 1658, 1735
Psp1406I	AACGTT	1 cut(s)	910
Psp5II	RGGWCCY	1 cut(s)	816
Psp6I	CCWGG	4 cut(s)	715, 1417, 2067, 2110
PspEI	GGTNACC	1 cut(s)	667
PspFI	CCCAGC	2 cut(s)	601, 700
PspGI	CCWGG	4 cut(s)	715, 1417, 2067, 2110
PspN4I	GGNNCC	9 cut(s)	613, 691, 712, 817, 1164, 1681, 1904, 2073, 2133
PspOMI	GGGCCC	1 cut(s)	1679
PspPI	GGNCC	7 cut(s)	22, 342, 486, 816, 992, 1679, 1680
PspPPI	RGGWCCY	1 cut(s)	816
PstI	CTGCAG	3 cut(s)	412, 1273, 2197
PstNI	CAGNNNCTG	3 cut(s)	183, 1253, 1493
PsuI	RGATCY	2 cut(s)	2125, 2131
PvuII	CAGCTG	1 cut(s)	827
RsaI	GTAC	5 cut(s)	176, 691, 1595, 1605, 2000
RsaNI	GTAC	5 cut(s)	175, 690, 1594, 1604, 1999
RseI	CAYNNNNRTG	5 cut(s)	444, 581, 738, 766, 1743
SacI	GAGCTC	4 cut(s)	776, 1417, 1658, 1735
Sau3AI	GATC	8 cut(s)	39, 196, 379, 1042, 1111, 1191, 2125, 2131
Sau96I	GGNCC	7 cut(s)	22, 342, 486, 816, 992, 1679, 1680
SchI	GAGTC	2 cut(s)	1044, 1490
ScrFI	CCNGG	4 cut(s)	717, 1419, 2069, 2112
SduI	GDGCHC	9 cut(s)	715, 776, 1417, 1476, 1658, 1683, 1735, 1849, 2076
SexAI	ACCWGGT	2 cut(s)	2067, 2110
SfaNI	GCATC	4 cut(s)	229, 1142, 1165, 1432
SfcI	CTRYAG	5 cut(s)	408, 432, 1245, 1269, 2193
SinI	GGWCC	4 cut(s)	342, 486, 816, 992
SmiMI	CAYNNNNRTG	5 cut(s)	444, 581, 738, 766, 1743
SmlI	CTYRAG	3 cut(s)	26, 229, 1651
SmoI	CTYRAG	3 cut(s)	26, 229, 1651
SphI	GCATGC	2 cut(s)	1343, 1585
Sse9I	AATT	9 cut(s)	85, 424, 890, 1223, 1427, 1510, 1673, 1723, 1858
SsiI	CCGC	4 cut(s)	165, 1701, 1786, 2076
SspMI	CTAG	5 cut(s)	957, 1082, 1125, 1179, 1800
SstI	GAGCTC	4 cut(s)	776, 1417, 1658, 1735
StyD4I	CCNGG	4 cut(s)	715, 1417, 2067, 2110
StyI	CCWWGG	1 cut(s)	629
TaaI	ACNGT	5 cut(s)	436, 490, 563, 689, 1598
TaiI	ACGT	4 cut(s)	913, 1140, 1390, 1609
TaqI	TCGA	5 cut(s)	206, 565, 1194, 1217, 1735
TasI	AATT	9 cut(s)	85, 424, 890, 1223, 1427, 1510, 1673, 1723, 1858
TatI	WGTACW	2 cut(s)	174, 1593
TauI	GCSGC	2 cut(s)	167, 1788
TfiI	GAWTC	5 cut(s)	180, 208, 587, 2035, 2269
TscAI	CASTG	5 cut(s)	99, 249, 773, 1315, 2001
TseFI	GTSAC	1 cut(s)	1306
Tsp45I	GTSAC	1 cut(s)	1306
TspGWI	ACGGA	3 cut(s)	1223, 2027, 2106
TspRI	CASTG	5 cut(s)	99, 249, 773, 1315, 2001
Van91I	CCANNNNNTGG	4 cut(s)	608, 707, 1832, 2031
Vha464I	CTTAAG	1 cut(s)	26
VpaK11BI	GGWCC	4 cut(s)	342, 486, 816, 992
XapI	RAATTY	2 cut(s)	1673, 1723
XceI	RCATGY	6 cut(s)	737, 1295, 1343, 1486, 1585, 1760
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1554
XmiI	GTMKAC	1 cut(s)	469
XmnI	GAANNNNTTC	1 cut(s)	910
XspI	CTAG	5 cut(s)	957, 1082, 1125, 1179, 1800
Zsp2I	ATGCAT	1 cut(s)	739

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.