Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0003451

Physical Location & Seq

Genomic Coordinates Forward (+)

629055 .. 633853

Gene Structure 4799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026115

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGACAGCAGTTTGAAGGCACTTTCGAGCCGCGAAGGGACGCCGGTGTCAGTGAGTGGGAGGACTGAGTCTGTGGTGTTGATGGAGGATGATGAGCCTAAGGAATGGGAAGCGCAAGTAGAGCCTAGTGTGCTCATCACTTTTGTTTCTCTGCTTCAAGGAGGAAATGATTTGAAGTGCATTCGATTCAGCATAGCAGGAGCCTTTCGCATCGTTCTTGCACAGTCTCGGCCTCTCTGTTCCGGTGTGGGAAGGACAAAGGCAATTTTGGGTTTTGGTCTTGGAATCAAAGTACAGTGCTTTGAAGTAGCTGGGATGAGCAGGGAGGGGTCTCCGGATTGGCTGCGCACTTTTCAGGTCCCAAAAACTGAGTCAGTACTGTCATTGTCCTCAGATTCTGAGTCTTCACTGAATGGACTTAATTTGGGGGAGGATAACACTGATGGCCCAGAACTATCTCCTCGTAAATCATCTGGATTTGATGAAGATGATGATGATGATGAAGTTATAGGTAAATTTCTTGGGAAAAGTGTTGCAGGGTCTCCATCTGATAAGAGATTGAAAGGCAAGTCTCCTAAACGAGGGGAAAAAATAGAAGAAGACATACCCCAGAAAACAAAGAAGTCAGACGGATCCAAGAAGAGAGAAGGTAAAACAAGGACCGTTGTTGAGAAGCCTTCAAAGACTCATGAACCGAATGATTCAGTTTTGGCGTTGTCATCAGATTCTGATCCTGAAAACAGCCCTCCCAGAGAGGATGGTATCCATGATGGAGAATCTTCTGACCTTAAAACATCTCAACTGCAGTCAATAGGTAACAGTGAGGATGCAGCTCTTATGGGCAGTAGTGAAGAGTCTCCATCTAAACAGGCTACCAAAGGAAAATCTTTGAAGAAAAGTCCAAAAGGAAAAGGCCAGTCACCCAAGAAAGAGAAGAGAAAGATAGGTAGCAAAGAAAAAGAAGGAATTTGTGGCGATGTGGAAGTGGCAGAGAAAGAAGCTTCTGACAAGCAGATTGATCCACGTGTATCCACCTCAACATTGCCGTTGGTGCTTTCTGAGAAAGTCCATCGTACAAAGGCACTTGTTGAGTGTGAAAAGGACTCCATAGATTTGAGTGGTGATATGGGTGCTGTAGGACGGGTAGTAGTTTCAGATTCTAGATCTGGGCATAGCGAGATGTGCTTAGATTTAAAAGGTACGGTTTTTCTTTTGTCTCACTCAATATACTTTGGCTCTCTCATATTGGTGCCATATTCTATGCCTCTTTTCATCTCTGTTTTTGTCATGTTGTTGTTAAGCCTTGTCTGTATAACTTATTGGTCTGCATGTTTCTGTATAAGCGGCTTCCATCTGACTGGTTTATTTTTGGTTAACATCACAGGAACCATTTACAAAACAACAATAGTTCCTTCCAGGACATTTTGTGTTGTTAGCTTTGGACCGTCCGAGGCAAAGATAGAAGCTATCATGAATGACTTCATTCAGCTGAAACCAGAAACATATGAAGCTGAAACAATGGTTGAAGGAACACTAGAGGGTTTCTTATTTGATTCCGAAGATGAGGCTGACAAAGTTCCTAAAGCAACTCCTCATCAAACTGATAAGAATGAGGATACTGAAGAACAAACCAATGGGACAACCAAAGGGAAAGCTGACAAAGCATCGAGGGTTGTAAAGAAGAGAGATAAGCCTGCAGGAGGGAAGCCACAGCCACCAAAGAAAGCAAGAAAGAAAACTCAAGTTTCCAAGAAGCCCAAGAACAAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008544 GO:0009058 GO:0009059 GO:0009330 GO:0009653 GO:0009888 GO:0009913 GO:0009987 GO:0010026 GO:0010090 GO:0016043 GO:0022402 GO:0022622 GO:0030154 GO:0030307 GO:0030855 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0040008 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045927 GO:0046483 GO:0048364 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051276 GO:0060429 GO:0065007 GO:0071704 GO:0071840 GO:0090304 GO:0090558 GO:0090626 GO:0097159 GO:0099402 GO:1901360 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

591

Amino Acids

63.96

Weight (kDa)

6.48

Isoelectric Point (pI)

44.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRX	PF08381	34 - 64	1.7e-06	Transcription factor regulating root and shoot growth via Pin3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630 AT5G24630
fragaria_vesca	FvH4_7g33320 FvH4_7g33320
malus_domestica	MD01G1231400.v1.1 MD07G1303400.v1.1
prunus_persica	Prupe.2G322100_v2.0.a1 Prupe.2G322100_v2.0.a1 Prupe.2G322100_v2.0.a1 Prupe.2G322100_v2.0.a1 Prupe.2G322100_v2.0.a1 Prupe.2G322100_v2.0.a1
pyrus_communis	pycom01g23940 pycom07g27630
rosa_chinensis	RchiOBHm_Chr1g0383301
rosa_laevigata	RLG00000026115
rosa_multiflora	Rmu_sc0007173.1_g000019 Rmu_sc0014196.1_g000003
rosa_roxburghii	Rroxscaffold_4G00277420
rosa_rugosa	Rorug01G0440400 Rorug01G0440400
rosa_samantha	Rh1AG466000 Rh1BG423400 Rh1CG436600 Rh1DG456100
rosa_wichuraiana	Rw1G040640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	46
Acc16I	TGCGCA	1 cut(s)	347
AccB1I	GGYRCC	1 cut(s)	1249
AccII	CGCG	1 cut(s)	33
AccIII	TCCGGA	1 cut(s)	334
AciI	CCGC	2 cut(s)	31, 1344
AclWI	GGATC	4 cut(s)	627, 640, 725, 1013
AcsI	RAATTY	2 cut(s)	515, 966
AcuI	CTGAAG	1 cut(s)	1641
AcvI	CACGTG	1 cut(s)	1025
AcyI	GRCGYC	1 cut(s)	41
AfaI	GTAC	4 cut(s)	294, 378, 1075, 1201
AfiI	CCNNNNNNNGG	2 cut(s)	581, 1700
AflIII	ACRYGT	1 cut(s)	1024
AgsI	TTSAA	8 cut(s)	16, 158, 175, 305, 562, 681, 892, 1526
AjnI	CCWGG	1 cut(s)	1415
AluBI	AGCT	8 cut(s)	311, 833, 1001, 1437, 1466, 1489, 1511, 1655
AluI	AGCT	8 cut(s)	311, 833, 1001, 1437, 1466, 1489, 1511, 1655
Alw21I	GWGCWC	1 cut(s)	135
Alw26I	GTCTC	6 cut(s)	231, 336, 546, 576, 861, 1221
AlwI	GGATC	4 cut(s)	627, 640, 725, 1013
AlwNI	CAGNNNCTG	2 cut(s)	398, 728
Aor13HI	TCCGGA	1 cut(s)	334
AoxI	GGCC	3 cut(s)	230, 445, 913
ApeKI	GCWGC	2 cut(s)	343, 830
ApoI	RAATTY	2 cut(s)	515, 966
ArsI	GACNNNNNNTTYG	2 cut(s)	356, 388
Asp700I	GAANNNNTTC	1 cut(s)	1478
AspLEI	GCGC	2 cut(s)	115, 348
AspS9I	GGNCC	4 cut(s)	358, 446, 660, 1442
AsuHPI	GGTGA	2 cut(s)	912, 1133
AvaII	GGWCC	3 cut(s)	358, 660, 1442
AxyI	CCTNAGG	1 cut(s)	99
BamHI	GGATCC	1 cut(s)	632
BanI	GGYRCC	1 cut(s)	1249
BarI	GAAGNNNNNNTAC	2 cut(s)	588, 620
BbrPI	CACGTG	1 cut(s)	1025
BbsI	GAAGAC	2 cut(s)	396, 606
Bbv12I	GWGCWC	1 cut(s)	135
BbvI	GCAGC	2 cut(s)	330, 842
BccI	CCATC	8 cut(s)	76, 437, 553, 752, 764, 868, 1077, 1359
BceAI	ACGGC	1 cut(s)	1030
BciT130I	CCWGG	1 cut(s)	1417
BciVI	GTATCC	3 cut(s)	773, 1039, 1609
BcoDI	GTCTC	6 cut(s)	231, 336, 546, 576, 861, 1221
BfaI	CTAG	3 cut(s)	126, 1161, 1535
BfmI	CTRYAG	3 cut(s)	803, 1134, 1695
BfuI	GTATCC	3 cut(s)	773, 1039, 1609
BglII	AGATCT	1 cut(s)	1163
BisI	GCNGC	4 cut(s)	31, 344, 831, 1345
BlsI	GCNGC	4 cut(s)	32, 345, 832, 1346
BmcAI	AGTACT	1 cut(s)	378
Bme1390I	CCNGG	1 cut(s)	1417
Bme18I	GGWCC	3 cut(s)	358, 660, 1442
BmgT120I	GGNCC	4 cut(s)	358, 446, 660, 1442
BmiI	GGNNCC	5 cut(s)	202, 360, 634, 1251, 1387
BmrFI	CCNGG	1 cut(s)	1417
BmsI	GCATC	3 cut(s)	219, 817, 1673
BpiI	GAAGAC	2 cut(s)	396, 606
BpuEI	CTTGAG	1 cut(s)	1725
BsaAI	YACGTR	1 cut(s)	1025
BsaBI	GATNNNNATC	1 cut(s)	729
BsaHI	GRCGYC	1 cut(s)	41
BsaI	GGTCTC	2 cut(s)	336, 546
BsaJI	CCNNGG	1 cut(s)	1449
BsaWI	WCCGGW	2 cut(s)	242, 334
Bsc4I	CCNNNNNNNGG	2 cut(s)	581, 1700
Bse118I	RCCGGY	1 cut(s)	43
Bse1I	ACTGG	2 cut(s)	916, 1363
Bse21I	CCTNAGG	1 cut(s)	99
Bse3DI	GCAATG	1 cut(s)	1040
Bse8I	GATNNNNATC	1 cut(s)	729
BseAI	TCCGGA	1 cut(s)	334
BseBI	CCWGG	1 cut(s)	1417
BseDI	CCNNGG	1 cut(s)	1449
BseGI	GGATG	4 cut(s)	94, 321, 763, 832
BseJI	GATNNNNATC	1 cut(s)	729
BseLI	CCNNNNNNNGG	2 cut(s)	581, 1700
BseMI	GCAATG	1 cut(s)	1040
BseMII	CTCAG	5 cut(s)	57, 360, 390, 405, 1050
BseNI	ACTGG	2 cut(s)	916, 1363
BseRI	GAGGAG	2 cut(s)	450, 1581
BseXI	GCAGC	2 cut(s)	330, 842
BseYI	CCCAGC	1 cut(s)	311
Bsh1236I	CGCG	1 cut(s)	33
BshFI	GGCC	3 cut(s)	232, 447, 915
BshNI	GGYRCC	1 cut(s)	1249
BsiHKAI	GWGCWC	1 cut(s)	135
BsiSI	CCGG	3 cut(s)	44, 243, 335
BslFI	GGGAC	3 cut(s)	52, 344, 1651
BslI	CCNNNNNNNGG	2 cut(s)	581, 1700
BsmAI	GTCTC	6 cut(s)	231, 336, 546, 576, 861, 1221
BsmFI	GGGAC	3 cut(s)	52, 344, 1651
BsmI	GAATGC	1 cut(s)	180
BsnI	GGCC	3 cut(s)	232, 447, 915
Bso31I	GGTCTC	2 cut(s)	336, 546
Bsp1286I	GDGCHC	1 cut(s)	135
Bsp13I	TCCGGA	1 cut(s)	334
Bsp143I	GATC	4 cut(s)	632, 730, 1018, 1163
BspACI	CCGC	2 cut(s)	31, 1344
BspANI	GGCC	3 cut(s)	232, 447, 915
BspCNI	CTCAG	5 cut(s)	58, 361, 391, 404, 1051
BspEI	TCCGGA	1 cut(s)	334
BspFNI	CGCG	1 cut(s)	33
BspHI	TCATGA	2 cut(s)	688, 1470
BspLI	GGNNCC	5 cut(s)	202, 360, 634, 1251, 1387
BspMAI	CTGCAG	2 cut(s)	807, 1699
BspPI	GGATC	4 cut(s)	627, 640, 725, 1013
BspT107I	GGYRCC	1 cut(s)	1249
BspTNI	GGTCTC	2 cut(s)	336, 546
BsrDI	GCAATG	1 cut(s)	1040
BsrFI	RCCGGY	1 cut(s)	43
BsrI	ACTGG	2 cut(s)	916, 1363
BssAI	RCCGGY	1 cut(s)	43
BssECI	CCNNGG	1 cut(s)	1449
BssMI	GATC	4 cut(s)	632, 730, 1018, 1163
BssNI	GRCGYC	1 cut(s)	41
Bst2UI	CCWGG	1 cut(s)	1417
Bst4CI	ACNGT	7 cut(s)	225, 297, 381, 664, 821, 1204, 1446
Bst6I	CTCTTC	4 cut(s)	635, 846, 929, 1676
BstACI	GRCGYC	1 cut(s)	41
BstBAI	YACGTR	1 cut(s)	1025
BstC8I	GCNNGC	1 cut(s)	1695
BstDEI	CTNAG	7 cut(s)	66, 99, 369, 391, 399, 1059, 1186
BstENI	CCTNNNNNAGG	2 cut(s)	579, 1698
BstF5I	GGATG	4 cut(s)	94, 321, 763, 832
BstFNI	CGCG	1 cut(s)	33
BstHHI	GCGC	2 cut(s)	115, 348
BstKTI	GATC	4 cut(s)	635, 733, 1021, 1166
BstMAI	GTCTC	6 cut(s)	231, 336, 546, 576, 861, 1221
BstMBI	GATC	4 cut(s)	632, 730, 1018, 1163
BstMWI	GCNNNNNNNGC	5 cut(s)	121, 130, 1051, 1182, 1661
BstNI	CCWGG	1 cut(s)	1417
BstNSI	RCATGY	1 cut(s)	1332
BstSCI	CCNGG	1 cut(s)	1415
BstSFI	CTRYAG	3 cut(s)	803, 1134, 1695
BstUI	CGCG	1 cut(s)	33
BstV1I	GCAGC	2 cut(s)	330, 842
BstV2I	GAAGAC	2 cut(s)	396, 606
BstX2I	RGATCY	2 cut(s)	632, 1163
BstXI	CCANNNNNNTGG	1 cut(s)	1358
BstYI	RGATCY	2 cut(s)	632, 1163
Bsu36I	CCTNAGG	1 cut(s)	99
BsuI	GTATCC	3 cut(s)	773, 1039, 1609
BsuRI	GGCC	3 cut(s)	232, 447, 915
BtgZI	GCGATG	1 cut(s)	990
BtsCI	GGATG	4 cut(s)	94, 321, 763, 832
BtsIMutI	CAGTG	5 cut(s)	57, 302, 407, 438, 826
Cac8I	GCNNGC	1 cut(s)	1695
CaiI	CAGNNNCTG	2 cut(s)	398, 728
CciI	TCATGA	2 cut(s)	688, 1470
CfoI	GCGC	2 cut(s)	115, 348
Cfr10I	RCCGGY	1 cut(s)	43
Cfr13I	GGNCC	4 cut(s)	358, 446, 660, 1442
CseI	GACGC	1 cut(s)	49
Csp6I	GTAC	4 cut(s)	293, 377, 1074, 1200
CviAII	CATG	5 cut(s)	689, 767, 1288, 1329, 1471
CviQI	GTAC	4 cut(s)	293, 377, 1074, 1200
DdeI	CTNAG	7 cut(s)	66, 99, 369, 391, 399, 1059, 1186
DpnI	GATC	4 cut(s)	634, 732, 1020, 1165
DpnII	GATC	4 cut(s)	632, 730, 1018, 1163
DraI	TTTAAA	1 cut(s)	1194
DrdI	GACNNNNNNGTC	1 cut(s)	46
DseDI	GACNNNNNNGTC	1 cut(s)	46
Eam1104I	CTCTTC	4 cut(s)	635, 846, 929, 1676
EarI	CTCTTC	4 cut(s)	635, 846, 929, 1676
Eco31I	GGTCTC	2 cut(s)	336, 546
Eco47I	GGWCC	3 cut(s)	358, 660, 1442
Eco57I	CTGAAG	1 cut(s)	1641
Eco72I	CACGTG	1 cut(s)	1025
Eco81I	CCTNAGG	1 cut(s)	99
EcoNI	CCTNNNNNAGG	2 cut(s)	579, 1698
EcoO109I	RGGNCCY	1 cut(s)	358
EcoRII	CCWGG	1 cut(s)	1415
FaeI	CATG	5 cut(s)	692, 770, 1291, 1332, 1474
FaqI	GGGAC	3 cut(s)	52, 344, 1651
FatI	CATG	5 cut(s)	688, 766, 1287, 1328, 1470
FauNDI	CATATG	1 cut(s)	1504
Fnu4HI	GCNGC	4 cut(s)	31, 344, 831, 1345
FokI	GGATG	4 cut(s)	101, 328, 770, 839
Fsp4HI	GCNGC	4 cut(s)	31, 344, 831, 1345
FspBI	CTAG	3 cut(s)	126, 1161, 1535
FspI	TGCGCA	1 cut(s)	347
GlaI	GCGC	2 cut(s)	114, 347
GluI	GCNGC	4 cut(s)	31, 344, 831, 1345
GsaI	CCCAGC	1 cut(s)	315
HaeIII	GGCC	3 cut(s)	232, 447, 915
HapII	CCGG	3 cut(s)	44, 243, 335
HgaI	GACGC	1 cut(s)	49
HhaI	GCGC	2 cut(s)	115, 348
Hin1I	GRCGYC	1 cut(s)	41
Hin1II	CATG	5 cut(s)	692, 770, 1291, 1332, 1474
Hin6I	GCGC	2 cut(s)	113, 346
HinP1I	GCGC	2 cut(s)	113, 346
HincII	GTYRAC	1 cut(s)	1375
HindII	GTYRAC	1 cut(s)	1375
HindIII	AAGCTT	1 cut(s)	999
HpaI	GTTAAC	1 cut(s)	1375
HpaII	CCGG	3 cut(s)	44, 243, 335
HphI	GGTGA	2 cut(s)	912, 1133
Hpy166II	GTNNAC	1 cut(s)	1375
Hpy188III	TCNNGA	6 cut(s)	335, 474, 689, 734, 1161, 1471
Hpy8I	GTNNAC	1 cut(s)	1375
HpyAV	CCTTC	8 cut(s)	10, 29, 246, 641, 687, 956, 1422, 1520
HpyCH4III	ACNGT	7 cut(s)	225, 297, 381, 664, 821, 1204, 1446
HpyCH4IV	ACGT	1 cut(s)	1024
HpyCH4V	TGCA	7 cut(s)	180, 221, 536, 805, 830, 1328, 1697
HpyF10VI	GCNNNNNNNGC	5 cut(s)	121, 130, 1051, 1182, 1661
HpyF3I	CTNAG	7 cut(s)	66, 99, 369, 391, 399, 1059, 1186
HpySE526I	ACGT	1 cut(s)	1024
Hsp92I	GRCGYC	1 cut(s)	41
Hsp92II	CATG	5 cut(s)	692, 770, 1291, 1332, 1474
HspAI	GCGC	2 cut(s)	113, 346
Kpn2I	TCCGGA	1 cut(s)	334
KspAI	GTTAAC	1 cut(s)	1375
Kzo9I	GATC	4 cut(s)	632, 730, 1018, 1163
LmnI	GCTCC	1 cut(s)	200
Lsp1109I	GCAGC	2 cut(s)	330, 842
LweI	GCATC	3 cut(s)	219, 817, 1673
MaeI	CTAG	3 cut(s)	126, 1161, 1535
MaeII	ACGT	1 cut(s)	1024
MaeIII	GTNAC	2 cut(s)	815, 918
MalI	GATC	4 cut(s)	634, 732, 1020, 1165
MboI	GATC	4 cut(s)	632, 730, 1018, 1163
MflI	RGATCY	2 cut(s)	632, 1163
MhlI	GDGCHC	1 cut(s)	135
MluCI	AATT	4 cut(s)	264, 421, 515, 966
MlyI	GAGTC	6 cut(s)	77, 380, 410, 679, 863, 1097
MroI	TCCGGA	1 cut(s)	334
MroXI	GAANNNNTTC	1 cut(s)	1478
MseI	TTAA	5 cut(s)	420, 789, 1193, 1298, 1374
MslI	CAYNNNNRTG	1 cut(s)	1247
MspA1I	CMGCKG	1 cut(s)	1489
MspI	CCGG	3 cut(s)	44, 243, 335
MspR9I	CCNGG	1 cut(s)	1417
Mva1269I	GAATGC	1 cut(s)	180
MvaI	CCWGG	1 cut(s)	1417
MvnI	CGCG	1 cut(s)	33
MwoI	GCNNNNNNNGC	5 cut(s)	121, 130, 1051, 1182, 1661
NdeI	CATATG	1 cut(s)	1504
NdeII	GATC	4 cut(s)	632, 730, 1018, 1163
NlaIII	CATG	5 cut(s)	692, 770, 1291, 1332, 1474
NlaIV	GGNNCC	5 cut(s)	202, 360, 634, 1251, 1387
NmeAIII	GCCGAG	1 cut(s)	208
NmuCI	GTSAC	1 cut(s)	918
NsbI	TGCGCA	1 cut(s)	347
NspI	RCATGY	1 cut(s)	1332
PagI	TCATGA	2 cut(s)	688, 1470
PctI	GAATGC	1 cut(s)	180
PdmI	GAANNNNTTC	1 cut(s)	1478
PfeI	GAWTC	8 cut(s)	186, 285, 395, 701, 725, 776, 1157, 1553
PflFI	GACNNNGTC	1 cut(s)	67
PfoI	TCCNGGA	1 cut(s)	1415
PkrI	GCNGC	4 cut(s)	32, 345, 832, 1346
PleI	GAGTC	6 cut(s)	76, 379, 409, 679, 862, 1097
PmaCI	CACGTG	1 cut(s)	1025
PmlI	CACGTG	1 cut(s)	1025
PpsI	GAGTC	6 cut(s)	76, 379, 409, 679, 862, 1097
Ppu21I	YACGTR	1 cut(s)	1025
PpuMI	RGGWCCY	1 cut(s)	358
Psp5II	RGGWCCY	1 cut(s)	358
Psp6I	CCWGG	1 cut(s)	1415
PspCI	CACGTG	1 cut(s)	1025
PspFI	CCCAGC	1 cut(s)	311
PspGI	CCWGG	1 cut(s)	1415
PspN4I	GGNNCC	5 cut(s)	202, 360, 634, 1251, 1387
PspPI	GGNCC	4 cut(s)	358, 446, 660, 1442
PspPPI	RGGWCCY	1 cut(s)	358
PstI	CTGCAG	2 cut(s)	807, 1699
PstNI	CAGNNNCTG	2 cut(s)	398, 728
PsuI	RGATCY	2 cut(s)	632, 1163
PsyI	GACNNNGTC	1 cut(s)	67
PvuII	CAGCTG	1 cut(s)	1489
RsaI	GTAC	4 cut(s)	294, 378, 1075, 1201
RsaNI	GTAC	4 cut(s)	293, 377, 1074, 1200
RseI	CAYNNNNRTG	1 cut(s)	1247
SaqAI	TTAA	5 cut(s)	420, 789, 1193, 1298, 1374
SatI	GCNGC	4 cut(s)	31, 344, 831, 1345
Sau3AI	GATC	4 cut(s)	632, 730, 1018, 1163
Sau96I	GGNCC	4 cut(s)	358, 446, 660, 1442
SbfI	CCTGCAGG	1 cut(s)	1699
ScaI	AGTACT	1 cut(s)	378
SchI	GAGTC	6 cut(s)	77, 380, 410, 679, 863, 1097
ScrFI	CCNGG	1 cut(s)	1417
SdaI	CCTGCAGG	1 cut(s)	1699
SduI	GDGCHC	1 cut(s)	135
SfaNI	GCATC	3 cut(s)	219, 817, 1673
SfcI	CTRYAG	3 cut(s)	803, 1134, 1695
SgrAI	CRCCGGYG	1 cut(s)	43
SinI	GGWCC	3 cut(s)	358, 660, 1442
SmiMI	CAYNNNNRTG	1 cut(s)	1247
SmlI	CTYRAG	1 cut(s)	1740
SmoI	CTYRAG	1 cut(s)	1740
Sse8387I	CCTGCAGG	1 cut(s)	1699
Sse9I	AATT	4 cut(s)	264, 421, 515, 966
SsiI	CCGC	2 cut(s)	31, 1344
SspMI	CTAG	3 cut(s)	126, 1161, 1535
StyD4I	CCNGG	1 cut(s)	1415
TaaI	ACNGT	7 cut(s)	225, 297, 381, 664, 821, 1204, 1446
TaiI	ACGT	1 cut(s)	1027
TaqI	TCGA	3 cut(s)	26, 184, 1667
TasI	AATT	4 cut(s)	264, 421, 515, 966
TatI	WGTACW	2 cut(s)	292, 376
TauI	GCSGC	2 cut(s)	33, 1347
TfiI	GAWTC	8 cut(s)	186, 285, 395, 701, 725, 776, 1157, 1553
Tru1I	TTAA	5 cut(s)	420, 789, 1193, 1298, 1374
Tru9I	TTAA	5 cut(s)	420, 789, 1193, 1298, 1374
TscAI	CASTG	5 cut(s)	57, 302, 414, 445, 826
TseFI	GTSAC	1 cut(s)	918
TseI	GCWGC	2 cut(s)	343, 830
Tsp45I	GTSAC	1 cut(s)	918
TspDTI	ATGAA	7 cut(s)	498, 516, 705, 1261, 1471, 1487, 1521
TspGWI	ACGGA	1 cut(s)	645
TspRI	CASTG	5 cut(s)	57, 302, 414, 445, 826
Tth111I	GACNNNGTC	1 cut(s)	67
VpaK11BI	GGWCC	3 cut(s)	358, 660, 1442
XagI	CCTNNNNNAGG	2 cut(s)	579, 1698
XapI	RAATTY	2 cut(s)	515, 966
XbaI	TCTAGA	1 cut(s)	1160
XceI	RCATGY	1 cut(s)	1332
XmnI	GAANNNNTTC	1 cut(s)	1478
XspI	CTAG	3 cut(s)	126, 1161, 1535
ZrmI	AGTACT	1 cut(s)	378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.