RLG00000028942

RWP-RK domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0006657
Physical Location & Seq
Reverse (-)
30414529 .. 30417784
3256 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028942

Sequence Viewer

Length: 2844 bp
ATGGCAGATATTCCATGGGATGTTTTGCCGTACCATGACCCTTACAATCAAGAAGTCCCTGACATTCTGAGTTCCGCTAATGATTATTTTGATCTAAGCCTTCAGAACATCTCGGCTCTGTTGGACGAAGTAGTAGTACCTCCATCCCCTCATTCTCATGCAGTTCCTGTTTTTGATAATGAAATCCAAAACATCAACAATCCCATTCCCTTTAATGCCCCAATATGGAATGTTGGCAACAATGCTAGTCTGTCCAGTAATGGAGGAGGAGGAGGGAGTCCGACTATTTCACTGGCGGATCATTTCTCAAAGATTTTTGGGGCAGAAGGTAATACTATTTCACTACCAGATCTTCCCTTGCAGATTTTCGGAGCAGGAGGCAATAACATTTCACTAGCGGATATTCCCTCGCATATCTTCGAAACAAGAGGCAATATTGATTCACTACCGGATCTTTCATCGCAGAATTTCAGAGCAAGAGGCAATACAAGTTCACTACCCGATCTTCCCTCGCAGTTTTTCAGAGTAGGAGGGAATTCATCTCATTCACTAGACCATCATCCCTCGCACATTTTCAGAGCAGGAGGAGACTCAAGTATTAATCCACTAGCGGAGATTTTTGGACCAAGAGGGAATACAATTTCACTAGACGATCATCGCTCGCAGATTTCCCGAGCAGGAGAAAAAAGTATTTTGGTAGAGAATCATCCCTCGCATATTTTCAGAGCAGGAGAAGAATCGAGTACTAATCCACTAGCGGAGATTTTCATACCAAGAGCGAGTACAATTTCACTAGAGGATCATCCCTCGCAGATTTCCCGAGTAGGAGAAAATAGTATTTCAGTAGCGAATCATCTCTCGCAGATTTTCAGAGCAGGAGGAGAATCGGGTCTCAATCCACTAGCAGAAATTTTTGAAGCAAGAAAGAGAAAAATTGCACTAAAGGATCATCCCTCGCAGATTTTCCGAACAAGAGGGAATAGTAATCTAGCAGCGAATCATCCCTCACAGATTTTCGGGTCACGAGGGAGTACTAATTCACTAGCGGATCATCCCTCGCAGTTGTATGGAGCAGGAGGGAGTGCTTTTAATTCACTGGACGATCATCCCTCGCATAATTTCAGAGCAGAAGGAGAATCGAGTATGAATCCATTAGCGGAGATTTTCGGAGCAAGAGGGAGCATAGTTTCACTAGAGGATCATCCCGAGCAGATTTTCCGAGCAGGAGGACAATCGAGTACTAATCCACTAGCGGAAATATTCGGAGCAAAAAAGAGTAAAGTTTCACTAGTGGATCATCCCTCGCAGATATTCCGAGCAGGAGGAGAATCGAGTACTAATCCACTAGCGGAAATTTTCGGAGCAAAAAATAGTAAAGTTTCACTAGAGGATCATCCCTTGCAGATATTCCGAGCAGGAGGAGAATCGAGTACTAATCCACTAGCGGAAATTTTCGGAGCAAAAAATAGTAAAGTTTCACTAGAGGATCATCCCTTGCAGATATTCCGAGCAGGAGGAGAATCGAGGATTAATCCACTAGCAGAGATTTTCAGAACAAGAAAGAGTACAATTTCCCTAGAGGATCACTCATCGCAGATTTTTCGAGCAGGAGGAGAATTGAGTACTAATTCACTTACTGAGATTTTTGAAGCAAGAAAGAGTACAATTTCACTAGAGGGTCACTCATCGCAGATTTTTCGAGCAGGAGGAGAATTGAGTACTAATTCACTTGCAGAGATTTTTGAAGCAAGAAAGAGTACAGTTTCACTAGAGGATCATCCCTCGCAGATTTTTCGAACAGGAGGGAATAGTATTTCAGTAGCGAATCATCCCTTGCAATTTCTCGGGTCAGGAAGGAATACTATTTCACTAGCGGATCATCCCTCACTGGTGTATGAAGCAGGAGGACGTACGTCTAATTCACTAGACGATCATCCTCTGTATATTTCCGGAGCAGAAGGAGAATTGAGTTTTGGTCAGAATCTGAATCATAATCTGGAGGGTTTCGGGAACAATAATACGTTGCCGCCTCTTCCACTGAATCGGCCTCCACGACAACCAATCCCCTCTAGTTGCTGCGGTTGTCAGGTTCTGATGGAAATCTTCCATGCTAATAACAAGTATATCATCAAATTTGAAATTCATGGAAAACGCGGCGTCATCTGTCATGCAATTCAAGAACGTCGCGCCAATGTCTTCCACAATTCCGGTGCTTCCAGTGAACCTCTCTATGAGAGCTTCGATTTTCGCACCAAAAGTCTAAAGGAAGTGAAGCACTTTCTGACTCAGTATTGCGAGAAGCGAAAGGCCGAAGGCTATATAAAGCAATTGGATCCTATGCAGCCATTTTTTCAGGCTCCCTTTGTGGGAATGGATGAAGATGAGTGGGAAGATGTTCTAACCTATCCTGAAGAATACATTCCCGAGGACTTGGATATTGACGACTTCGGTCTACCAAATTTAGATGAAATGGAGCGCCAACCTGCTGATAAGGCGTCGTCCGGGAATTGGAAACGGAAGGGTCCTGCTAAGCGTCCTAGGCTTTCCCTTCCAGAACAGAGGGAGAGAGCGGCGAAGATGAAATTGGAGGATCTCCGTGTTTACTTCCATCTCACCTTTGAAGAGGCTTCTGAGGAATTGCGATTATCCGCAGCTGTTGTCAAAAGGCTCTGCCGCAAGTTTGGAATAGGCAGATGGCCTGGTAGAAAGATCAAAGCCATTTCAAAGATGATTTCAAATTTACAACCTCTGTTGCTTTCATATAGTGAGAGCACCAGAGTTCATATAGCAGCCAAAATTGAAAGTCTGGAGAAGGAGATCGCTATACTTTCGCGTTATAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RWP-RK

Protein Analysis

948

Amino Acids

103.88

Weight (kDa)

5.9

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RWP-RK PF02042 859 - 906 6.8e-17 RWP-RK domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2491
AccBSI CCGCTC 1 cut(s) 2570
AccI GTMKAC 1 cut(s) 2452
AccII CGCG 3 cut(s) 2154, 2187, 2833
AccIII TCCGGA 1 cut(s) 1949
AcsI RAATTY 9 cut(s) 466, 535, 909, 1353, 1449, 2132, 2139, 2458, 2737
AcuI CTGAAG 2 cut(s) 86, 2430
AcyI GRCGYC 2 cut(s) 2157, 2495
AfiI CCNNNNNNNGG 3 cut(s) 225, 2366, 2508
AgsI TTSAA 9 cut(s) 917, 1649, 1745, 2138, 2177, 2621, 2724, 2736, 2801
AhlI ACTAGT 1 cut(s) 1288
AjnI CCWGG 1 cut(s) 2698
AjuI GAANNNNNNNTTGG 4 cut(s) 1956, 1988, 2567, 2599
AluBI AGCT 3 cut(s) 2238, 2654, 2841
AluI AGCT 3 cut(s) 2238, 2654, 2841
Alw21I GWGCWC 1 cut(s) 2774
Alw26I GTCTC 2 cut(s) 582, 896
AlwNI CAGNNNCTG 3 cut(s) 167, 1984, 2092
Ama87I CYCGRG 5 cut(s) 672, 819, 1205, 1844, 2423
Aor13HI TCCGGA 1 cut(s) 1949
AoxI GGCC 3 cut(s) 2045, 2307, 2696
ApeKI GCWGC 5 cut(s) 992, 2076, 2341, 2651, 2789
ApoI RAATTY 9 cut(s) 466, 535, 909, 1353, 1449, 2132, 2139, 2458, 2737
AseI ATTAAT 2 cut(s) 600, 1530
Asp700I GAANNNNTTC 2 cut(s) 2394, 2418
AspA2I CCTAGG 1 cut(s) 2537
AspLEI GCGC 2 cut(s) 2189, 2478
AspS9I GGNCC 2 cut(s) 623, 2522
AsuC2I CCSGG 1 cut(s) 2503
AsuHPI GGTGA 1 cut(s) 2605
AsuII TTCGAA 2 cut(s) 420, 1795
AvaI CYCGRG 5 cut(s) 672, 819, 1205, 1844, 2423
AvaII GGWCC 2 cut(s) 623, 2522
AvrII CCTAGG 1 cut(s) 2537
BamHI GGATCC 1 cut(s) 2332
BarI GAAGNNNNNNTAC 2 cut(s) 120, 152
BauI CACGAG 1 cut(s) 1023
BbsI GAAGAC 1 cut(s) 2188
Bbv12I GWGCWC 1 cut(s) 2774
BbvI GCAGC 5 cut(s) 1004, 2063, 2353, 2663, 2801
BccI CCATC 5 cut(s) 151, 564, 2089, 2616, 2688
BceAI ACGGC 1 cut(s) 13
BcgI CGANNNNNNTGC 6 cut(s) 1583, 1617, 1679, 1713, 1775, 1809
BciT130I CCWGG 1 cut(s) 2700
BcnI CCSGG 1 cut(s) 2503
BcoDI GTCTC 2 cut(s) 582, 896
BcuI ACTAGT 1 cut(s) 1288
BfoI RGCGCY 1 cut(s) 2479
BfuAI ACCTGC 1 cut(s) 2491
BglII AGATCT 1 cut(s) 349
BisI GCNGC 9 cut(s) 993, 2027, 2077, 2155, 2342, 2571, 2652, 2674, 2790
BlnI CCTAGG 1 cut(s) 2537
BlpI GCTNAGC 1 cut(s) 2529
BlsI GCNGC 9 cut(s) 994, 2028, 2078, 2156, 2343, 2572, 2653, 2675, 2791
BmcAI AGTACT 7 cut(s) 745, 1033, 1240, 1336, 1432, 1624, 1720
Bme1390I CCNGG 2 cut(s) 2503, 2700
Bme18I GGWCC 2 cut(s) 623, 2522
BmeT110I CYCGRG 5 cut(s) 672, 819, 1205, 1844, 2423
BmgT120I GGNCC 2 cut(s) 623, 2522
BmiI GGNNCC 3 cut(s) 2334, 2358, 2523
BmrFI CCNGG 2 cut(s) 2503, 2700
BoxI GACNNNNGTC 2 cut(s) 1912, 2448
BpiI GAAGAC 1 cut(s) 2188
BplI GAGNNNNNCTC 4 cut(s) 1571, 1603, 1667, 1699
BpmI CTGGAG 2 cut(s) 2018, 2828
Bpu1102I GCTNAGC 1 cut(s) 2529
Bpu14I TTCGAA 2 cut(s) 420, 1795
BpuEI CTTGAG 1 cut(s) 577
BpuMI CCSGG 1 cut(s) 2503
BsaBI GATNNNNATC 1 cut(s) 2099
BsaHI GRCGYC 2 cut(s) 2157, 2495
BsaI GGTCTC 1 cut(s) 896
BsaJI CCNNGG 3 cut(s) 14, 2424, 2537
BsaWI WCCGGW 3 cut(s) 448, 1949, 2207
Bsc4I CCNNNNNNNGG 3 cut(s) 225, 2366, 2508
Bse1I ACTGG 5 cut(s) 255, 297, 1101, 1893, 2217
Bse8I GATNNNNATC 1 cut(s) 2099
BseAI TCCGGA 1 cut(s) 1949
BseBI CCWGG 1 cut(s) 2700
BseDI CCNNGG 3 cut(s) 14, 2424, 2537
BseJI GATNNNNATC 1 cut(s) 2099
BseLI CCNNNNNNNGG 3 cut(s) 225, 2366, 2508
BseMII CTCAG 4 cut(s) 59, 1629, 2300, 2622
BseNI ACTGG 5 cut(s) 255, 297, 1101, 1893, 2217
BseXI GCAGC 5 cut(s) 1004, 2063, 2353, 2663, 2801
Bsh1236I CGCG 3 cut(s) 2154, 2187, 2833
BshFI GGCC 3 cut(s) 2047, 2309, 2698
BsiHKAI GWGCWC 1 cut(s) 2774
BsiHKCI CYCGRG 5 cut(s) 672, 819, 1205, 1844, 2423
BsiSI CCGG 4 cut(s) 449, 1950, 2208, 2502
BsiWI CGTACG 1 cut(s) 1910
BslFI GGGAC 1 cut(s) 41
BslI CCNNNNNNNGG 3 cut(s) 225, 2366, 2508
BsmAI GTCTC 2 cut(s) 582, 896
BsmFI GGGAC 1 cut(s) 41
BsnI GGCC 3 cut(s) 2047, 2309, 2698
Bso31I GGTCTC 1 cut(s) 896
BsoBI CYCGRG 5 cut(s) 672, 819, 1205, 1844, 2423
Bsp119I TTCGAA 2 cut(s) 420, 1795
Bsp1286I GDGCHC 1 cut(s) 2774
Bsp13I TCCGGA 1 cut(s) 1949
Bsp1720I GCTNAGC 1 cut(s) 2529
Bsp19I CCATGG 1 cut(s) 14
BspANI GGCC 3 cut(s) 2047, 2309, 2698
BspCNI CTCAG 4 cut(s) 60, 1630, 2299, 2623
BspEI TCCGGA 1 cut(s) 1949
BspFNI CGCG 3 cut(s) 2154, 2187, 2833
BspLI GGNNCC 3 cut(s) 2334, 2358, 2523
BspMI ACCTGC 1 cut(s) 2491
BspT104I TTCGAA 2 cut(s) 420, 1795
BspTNI GGTCTC 1 cut(s) 896
BsrBI CCGCTC 1 cut(s) 2570
BsrI ACTGG 5 cut(s) 255, 297, 1101, 1893, 2217
BssECI CCNNGG 3 cut(s) 14, 2424, 2537
BssNI GRCGYC 2 cut(s) 2157, 2495
BssSI CACGAG 1 cut(s) 1023
BssT1I CCWWGG 2 cut(s) 14, 2537
Bst2BI CACGAG 1 cut(s) 1023
Bst2UI CCWGG 1 cut(s) 2700
Bst4CI ACNGT 1 cut(s) 1762
Bst6I CTCTTC 2 cut(s) 2037, 2616
BstACI GRCGYC 2 cut(s) 2157, 2495
BstBI TTCGAA 2 cut(s) 420, 1795
BstC8I GCNNGC 1 cut(s) 662
BstDEI CTNAG 6 cut(s) 68, 95, 1638, 2286, 2529, 2631
BstDSI CCRYGG 1 cut(s) 14
BstFNI CGCG 3 cut(s) 2154, 2187, 2833
BstH2I RGCGCY 1 cut(s) 2479
BstHHI GCGC 2 cut(s) 2189, 2478
BstMAI GTCTC 2 cut(s) 582, 896
BstMWI GCNNNNNNNGC 2 cut(s) 2492, 2539
BstNI CCWGG 1 cut(s) 2700
BstPAI GACNNNNGTC 2 cut(s) 1912, 2448
BstSCI CCNGG 2 cut(s) 2501, 2698
BstUI CGCG 3 cut(s) 2154, 2187, 2833
BstV1I GCAGC 5 cut(s) 1004, 2063, 2353, 2663, 2801
BstV2I GAAGAC 1 cut(s) 2188
BstX2I RGATCY 4 cut(s) 349, 451, 2332, 2590
BstYI RGATCY 4 cut(s) 349, 451, 2332, 2590
BsuRI GGCC 3 cut(s) 2047, 2309, 2698
BtgI CCRYGG 1 cut(s) 14
BtgZI GCGATG 4 cut(s) 444, 641, 1575, 1671
BtsIMutI CAGTG 5 cut(s) 290, 1094, 1886, 2036, 2224
BveI ACCTGC 1 cut(s) 2491
Cac8I GCNNGC 1 cut(s) 662
CaiI CAGNNNCTG 3 cut(s) 167, 1984, 2092
CfoI GCGC 2 cut(s) 2189, 2478
Cfr13I GGNCC 2 cut(s) 623, 2522
CseI GACGC 3 cut(s) 2146, 2484, 2522
CviAII CATG 6 cut(s) 15, 35, 158, 2108, 2144, 2168
DdeI CTNAG 6 cut(s) 68, 95, 1638, 2286, 2529, 2631
Eam1104I CTCTTC 2 cut(s) 2037, 2616
EarI CTCTTC 2 cut(s) 2037, 2616
EciI GGCGGA 1 cut(s) 311
Eco130I CCWWGG 2 cut(s) 14, 2537
Eco31I GGTCTC 1 cut(s) 896
Eco47I GGWCC 2 cut(s) 623, 2522
Eco57I CTGAAG 2 cut(s) 86, 2430
Eco88I CYCGRG 5 cut(s) 672, 819, 1205, 1844, 2423
EcoO109I RGGNCCY 1 cut(s) 2522
EcoRI GAATTC 1 cut(s) 535
EcoRII CCWGG 1 cut(s) 2698
EcoT14I CCWWGG 2 cut(s) 14, 2537
ErhI CCWWGG 2 cut(s) 14, 2537
FaeI CATG 6 cut(s) 18, 38, 161, 2111, 2147, 2171
FaqI GGGAC 1 cut(s) 41
FatI CATG 6 cut(s) 14, 34, 157, 2107, 2143, 2167
FblI GTMKAC 1 cut(s) 2452
Fnu4HI GCNGC 9 cut(s) 993, 2027, 2077, 2155, 2342, 2571, 2652, 2674, 2790
Fsp4HI GCNGC 9 cut(s) 993, 2027, 2077, 2155, 2342, 2571, 2652, 2674, 2790
GlaI GCGC 2 cut(s) 2188, 2477
GluI GCNGC 9 cut(s) 993, 2027, 2077, 2155, 2342, 2571, 2652, 2674, 2790
GsuI CTGGAG 2 cut(s) 2018, 2828
HaeII RGCGCY 1 cut(s) 2479
HaeIII GGCC 3 cut(s) 2047, 2309, 2698
HapII CCGG 4 cut(s) 449, 1950, 2208, 2502
HgaI GACGC 3 cut(s) 2146, 2484, 2522
HhaI GCGC 2 cut(s) 2189, 2478
Hin1I GRCGYC 2 cut(s) 2157, 2495
Hin1II CATG 6 cut(s) 18, 38, 161, 2111, 2147, 2171
Hin6I GCGC 2 cut(s) 2187, 2476
HinP1I GCGC 2 cut(s) 2187, 2476
HpaII CCGG 4 cut(s) 449, 1950, 2208, 2502
HphI GGTGA 1 cut(s) 2605
Hpy166II GTNNAC 4 cut(s) 494, 2222, 2453, 2602
Hpy8I GTNNAC 4 cut(s) 494, 2222, 2453, 2602
Hpy99I CGWCG 2 cut(s) 2187, 2500
HpyAV CCTTC 9 cut(s) 110, 320, 1124, 1848, 1952, 2306, 2512, 2558, 2806
HpyCH4III ACNGT 1 cut(s) 1762
HpyCH4IV ACGT 4 cut(s) 1909, 1913, 2021, 2182
HpyCH4V TGCA 9 cut(s) 161, 361, 938, 1402, 1498, 1733, 1837, 2171, 2341
HpyF10VI GCNNNNNNNGC 2 cut(s) 2492, 2539
HpyF3I CTNAG 6 cut(s) 68, 95, 1638, 2286, 2529, 2631
HpySE526I ACGT 4 cut(s) 1909, 1913, 2021, 2182
Hsp92I GRCGYC 2 cut(s) 2157, 2495
Hsp92II CATG 6 cut(s) 18, 38, 161, 2111, 2147, 2171
HspAI GCGC 2 cut(s) 2187, 2476
Kpn2I TCCGGA 1 cut(s) 1949
Lsp1109I GCAGC 5 cut(s) 1004, 2063, 2353, 2663, 2801
MaeII ACGT 4 cut(s) 1909, 1913, 2021, 2182
MaeIII GTNAC 2 cut(s) 1020, 1679
MbiI CCGCTC 1 cut(s) 2570
MfeI CAATTG 1 cut(s) 2327
MflI RGATCY 4 cut(s) 349, 451, 2332, 2590
MhlI GDGCHC 1 cut(s) 2774
MlyI GAGTC 3 cut(s) 286, 584, 2278
MmeI TCCRAC 2 cut(s) 102, 305
MroI TCCGGA 1 cut(s) 1949
MroXI GAANNNNTTC 2 cut(s) 2394, 2418
MseI TTAA 4 cut(s) 213, 600, 1089, 1530
MslI CAYNNNNRTG 1 cut(s) 156
MspA1I CMGCKG 1 cut(s) 2654
MspI CCGG 4 cut(s) 449, 1950, 2208, 2502
MspR9I CCNGG 2 cut(s) 2503, 2700
MunI CAATTG 1 cut(s) 2327
MvaI CCWGG 1 cut(s) 2700
MvnI CGCG 3 cut(s) 2154, 2187, 2833
MwoI GCNNNNNNNGC 2 cut(s) 2492, 2539
NciI CCSGG 1 cut(s) 2503
NcoI CCATGG 1 cut(s) 14
NlaIII CATG 6 cut(s) 18, 38, 161, 2111, 2147, 2171
NlaIV GGNNCC 3 cut(s) 2334, 2358, 2523
NmeAIII GCCGAG 1 cut(s) 92
NmuCI GTSAC 2 cut(s) 1020, 1679
NspV TTCGAA 2 cut(s) 420, 1795
PcsI WCGNNNNNNNCGW 1 cut(s) 2050
PdmI GAANNNNTTC 2 cut(s) 2394, 2418
Pfl23II CGTACG 1 cut(s) 1910
PfoI TCCNGGA 1 cut(s) 2501
PkrI GCNGC 9 cut(s) 994, 2028, 2078, 2156, 2343, 2572, 2653, 2675, 2791
PleI GAGTC 3 cut(s) 285, 584, 2278
PpsI GAGTC 3 cut(s) 285, 584, 2278
PpuMI RGGWCCY 1 cut(s) 2522
PshAI GACNNNNGTC 2 cut(s) 1912, 2448
PshBI ATTAAT 2 cut(s) 600, 1530
Psp5II RGGWCCY 1 cut(s) 2522
Psp6I CCWGG 1 cut(s) 2698
PspGI CCWGG 1 cut(s) 2698
PspLI CGTACG 1 cut(s) 1910
PspN4I GGNNCC 3 cut(s) 2334, 2358, 2523
PspPI GGNCC 2 cut(s) 623, 2522
PspPPI RGGWCCY 1 cut(s) 2522
PstNI CAGNNNCTG 3 cut(s) 167, 1984, 2092
PsuI RGATCY 4 cut(s) 349, 451, 2332, 2590
PvuII CAGCTG 1 cut(s) 2654
RseI CAYNNNNRTG 1 cut(s) 156
SaqAI TTAA 4 cut(s) 213, 600, 1089, 1530
SatI GCNGC 9 cut(s) 993, 2027, 2077, 2155, 2342, 2571, 2652, 2674, 2790
Sau96I GGNCC 2 cut(s) 623, 2522
ScaI AGTACT 7 cut(s) 745, 1033, 1240, 1336, 1432, 1624, 1720
SchI GAGTC 3 cut(s) 286, 584, 2278
ScrFI CCNGG 2 cut(s) 2503, 2700
SduI GDGCHC 1 cut(s) 2774
SfuI TTCGAA 2 cut(s) 420, 1795
SinI GGWCC 2 cut(s) 623, 2522
SmiMI CAYNNNNRTG 1 cut(s) 156
SmlI CTYRAG 1 cut(s) 592
SmoI CTYRAG 1 cut(s) 592
SpeI ACTAGT 1 cut(s) 1288
SspI AATATT 2 cut(s) 436, 1260
StyD4I CCNGG 2 cut(s) 2501, 2698
StyI CCWWGG 2 cut(s) 14, 2537
TaaI ACNGT 1 cut(s) 1762
TaiI ACGT 4 cut(s) 1912, 1916, 2024, 2185
TaqII GACCGA 1 cut(s) 2438
TauI GCSGC 4 cut(s) 2029, 2157, 2573, 2676
Tru1I TTAA 4 cut(s) 213, 600, 1089, 1530
Tru9I TTAA 4 cut(s) 213, 600, 1089, 1530
TscAI CASTG 5 cut(s) 297, 1101, 1893, 2043, 2224
TseFI GTSAC 2 cut(s) 1020, 1679
TseI GCWGC 5 cut(s) 992, 2076, 2341, 2651, 2789
Tsp45I GTSAC 2 cut(s) 1020, 1679
TspGWI ACGGA 2 cut(s) 2530, 2585
TspRI CASTG 5 cut(s) 297, 1101, 1893, 2043, 2224
VpaK11BI GGWCC 2 cut(s) 623, 2522
VspI ATTAAT 2 cut(s) 600, 1530
XapI RAATTY 9 cut(s) 466, 535, 909, 1353, 1449, 2132, 2139, 2458, 2737
XmaJI CCTAGG 1 cut(s) 2537
XmiI GTMKAC 1 cut(s) 2452
XmnI GAANNNNTTC 2 cut(s) 2394, 2418
ZrmI AGTACT 7 cut(s) 745, 1033, 1240, 1336, 1432, 1624, 1720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.