Rh1DG185400

RWP-RK domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0006657
Physical Location & Seq
Forward (+)
37348625 .. 37352843
4219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG185400.1

Sequence Viewer

Length: 2613 bp
ATGATTGATTATTGTGTGGATACTGGATTCATCTTTGTCTTGGAGATCGATTGCACAAACCTTCAGAACATCTCGGTTCTGTTGGACGAAGTAGTAGTACATCCATCCCCTCATTCTCATGCAGTTCCTGTTTTTGATAATGAAATCCAAAACATCAACAATCCCATTCCCTTTAATGCCCCAATATGGAATGTTGGCAACAACGCTAGTCTGTCCAGTAATGGAGGAGGAGGAGGGAGTCCGACTATTTCACTGGCGGATCATTTCTCAGAGATTTTTGGGGCAGAAGCTAATACTATTTCACTACCAGATCTTCCCTCGCAGATTTTCGGAGCAGGAGGCAATAACATTTTACTAACGGATATTCCCTCGCATATCTTCGAAGCAGGAGGCAATATTGTTTCACTACCGGATCTTCCATCGCAGAATTTCAGAGCAAGAGGCAATACAAGTTCACTACCCGATCTTCCATCGCAGTTTTTCAGAGTAGGAGGGAATTCATCTCATTCACTAGACCATCATCCCTCGCACATTTTCAGAGCAGGAGGAGACTCAAGTATTAATCCAGTAGCGGAGATTTTTGGACCAAAAGGGAATACAATTTCACTAGAGGATCATCGCTCGCAGATTTCTCGAGCAGGAGAAAAAAGTATTTTGGTAGAGAATCATCCCTCGCAGATTTTCAGAGCAGGAGGAGAATCGAGTACTAATCCACTAGCGGAGATTTTCATACCAAGAGGGAGTACAATTTCACTAGATGATCATCCCTCGCAGATTTCCCGAGTAGGAGAAAATAGTATTTCAGTAGCGAATCATCTCTCGCAGATTTTCAGAGCAGGAGAAGAGTCGAGTCTCAATCCACTAGCGGAAATTTTTGAAGCAAGAAAGAGAAAAATTGCACTAGAGGATCATCCCTCGCAGATTTTCCAAACAAGAGGGAATAGTAATCTAGCAGCGAATCATCCCTCACTGTTTTTCGGGTCACGAGGGAGTACTAATTCACTAGCGGATCATCCCTCGCAGTTGTATGGAGCAGGAGGGAGTGCTTTTAATTCACTGGACGATCATCCCTCGCATAATTTCAGAGCAGAAGGAGAATCGAGTATGAATCCATTAGCGGAGATTTTCGGAGCAAGAGGGAGCATAGTTTCACTAGAGGATCATCCCTCGCAGATTTTCCGAGCAGGAGGACAATCGAGTACTAATCCACTAGCGGAAATATTCGGAGCAAAAAAGAGTAAAGTTTCACTAGTGGATCATCCCTCGCAGATATTCCGAGCAGGAGGAGAATCGAGTACTAATCCACTAGCGGAAATTTTCGGAGCAAAAAAGAGTAAAGTTTCACTAGAGGATCATCCCTTGAAGATATTCCGAGCAGGAGGAGAATCGAGTATTAATCCACTAGCAGAGATTTTCAGAACAAGAAAGAGTACAATTTCACTAGAGGATCACCCATCGCAGATTTTTCGAGCAGGAGGAGAATTGAGTACTAATCCACTTGCAGAGATTTTTGAAGCAAGAAAGAGTTCAGTTTCACTAGAGGATCATCCCTCGCAGATTTTTCGAACAGGAGGGAATAGTATTTCAGTAGCGAATCATCCCTTGCAATTTTTCGGGTCAGGACGGAATACTATTTCACTAGCGGATCATCCCTCACAGTTGTATGAAGCAGGAGGACGTACGTCTAATTCACTAGACGATCATCCTCTGTATATTTCCGGAGCAGAAGGAGAATTGAGTTTTGGTCAGAATCTGAATCATAATCTGGAGGGTTTCGGCAACAATAGTACGTTGCGGCCTCTTCCACTGAATCGGCTTCCACGACAACCAATCCCCTCTAGTTGCTGCGGTTGTCAGGTTCTGAGGGAAATCTTCCATGCTAATAACAAGTATATCATCAAATTTGAAATTCATGGAAAACGCGGCGTCATCTGTCATGCAATTCAAGAACGTCGCGCCAATGTCTTCCACAATTCCGGTGCTTCCAGTGAACCTCTCTATGAGAGCTTCGATTTTCGCACTAAAAGCCTAAAGGAAGTGGAGCACTTTCTAACTCGGTATTGCGAGGAGCGAAAGGCCGAAGGCTATATAAAGCAATTGGATCCTATGCAGCCATTTTTTCAGCCTCCCTTTGTCGGAATGGATGAAGATGAGTGGGAAGATGTTCTAACCTATCCTGAAGAATACATTCCCGAGGACTTGGATATTGACGACTTCGATCTACCAAATTTAGATGAAATGGAGCGCCAACCTGCTGATAAGGCGTCGTCCGGGAATTGGAAACGGAAGGGTCCTGCTAAGCGTCCTAGGCTTTCCCTTCCAGAACAGAGGGAGAGAGCGGCGAAGATGAAATTGGAGGATCTCCGTGTTTACTTCCATCTCACCTTTGAAGAGGCTTGTGAGGAATTGCGATTATCCGCAGCTGTTGTCAAAAGGCTCTGCCGCAAGTTTGGAATAGGCAGATGGCCTGGTAGAAAGATCAAAGCCATTTCAAAGATGATTTCAAATTTACAACCTCTGTTGTTCTCATATAGTGAGAGCACCAGAGTTCATATAGCAGCCAAAATTGAAAGTCTGGAGAAGGAGATCGCTATACTTTCGCGTTATAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RWP-RK

Protein Analysis

870

Amino Acids

95.65

Weight (kDa)

5.84

Isoelectric Point (pI)

45.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RWP-RK PF02042 782 - 829 2.7e-17 RWP-RK domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2260
AccBSI CCGCTC 1 cut(s) 2339
AccII CGCG 3 cut(s) 1923, 1956, 2602
AccIII TCCGGA 1 cut(s) 1718
AcsI RAATTY 8 cut(s) 427, 496, 870, 1314, 1901, 1908, 2227, 2506
AcuI CTGAAG 2 cut(s) 47, 2199
AcyI GRCGYC 2 cut(s) 1926, 2264
AfiI CCNNNNNNNGG 3 cut(s) 186, 2135, 2277
AgsI TTSAA 9 cut(s) 878, 1363, 1514, 1907, 1946, 2390, 2493, 2505, 2570
AhlI ACTAGT 1 cut(s) 1249
AjnI CCWGG 1 cut(s) 2467
AjuI GAANNNNNNNTTGG 4 cut(s) 1725, 1757, 2336, 2368
AluBI AGCT 4 cut(s) 290, 2007, 2423, 2610
AluI AGCT 4 cut(s) 290, 2007, 2423, 2610
Alw21I GWGCWC 2 cut(s) 2046, 2543
Alw26I GTCTC 2 cut(s) 543, 857
AlwNI CAGNNNCTG 3 cut(s) 128, 1753, 1861
Ama87I CYCGRG 3 cut(s) 633, 780, 2192
Aor13HI TCCGGA 1 cut(s) 1718
AoxI GGCC 3 cut(s) 1796, 2076, 2465
ApeKI GCWGC 5 cut(s) 953, 1845, 2110, 2420, 2558
ApoI RAATTY 8 cut(s) 427, 496, 870, 1314, 1901, 1908, 2227, 2506
AseI ATTAAT 2 cut(s) 561, 1395
Asp700I GAANNNNTTC 4 cut(s) 1367, 1525, 2163, 2187
AspA2I CCTAGG 1 cut(s) 2306
AspLEI GCGC 2 cut(s) 1958, 2247
AspS9I GGNCC 2 cut(s) 584, 2291
AsuC2I CCSGG 1 cut(s) 2272
AsuHPI GGTGA 2 cut(s) 1442, 2374
AsuII TTCGAA 2 cut(s) 381, 1564
AvaI CYCGRG 3 cut(s) 633, 780, 2192
AvaII GGWCC 2 cut(s) 584, 2291
AvrII CCTAGG 1 cut(s) 2306
BamHI GGATCC 1 cut(s) 2101
BarI GAAGNNNNNNTAC 2 cut(s) 81, 113
BauI CACGAG 1 cut(s) 984
BbsI GAAGAC 1 cut(s) 1957
Bbv12I GWGCWC 2 cut(s) 2046, 2543
BbvI GCAGC 5 cut(s) 965, 1832, 2122, 2432, 2570
BccI CCATC 7 cut(s) 112, 427, 478, 525, 1462, 2385, 2457
BcgI CGANNNNNNTGC 6 cut(s) 614, 648, 1448, 1482, 1544, 1578
BciT130I CCWGG 1 cut(s) 2469
BciVI GTATCC 1 cut(s) 13
BclI TGATCA 1 cut(s) 760
BcnI CCSGG 1 cut(s) 2272
BcoDI GTCTC 2 cut(s) 543, 857
BcuI ACTAGT 1 cut(s) 1249
BfoI RGCGCY 1 cut(s) 2248
BfuAI ACCTGC 1 cut(s) 2260
BfuI GTATCC 1 cut(s) 13
BglII AGATCT 1 cut(s) 310
BisI GCNGC 9 cut(s) 954, 1796, 1846, 1924, 2111, 2340, 2421, 2443, 2559
BlnI CCTAGG 1 cut(s) 2306
BlpI GCTNAGC 1 cut(s) 2298
BlsI GCNGC 9 cut(s) 955, 1797, 1847, 1925, 2112, 2341, 2422, 2444, 2560
BmcAI AGTACT 5 cut(s) 706, 994, 1201, 1297, 1489
Bme1390I CCNGG 2 cut(s) 2272, 2469
Bme18I GGWCC 2 cut(s) 584, 2291
BmeT110I CYCGRG 3 cut(s) 633, 780, 2192
BmgT120I GGNCC 2 cut(s) 584, 2291
BmiI GGNNCC 2 cut(s) 2103, 2292
BmrFI CCNGG 2 cut(s) 2272, 2469
BoxI GACNNNNGTC 1 cut(s) 1681
BpiI GAAGAC 1 cut(s) 1957
BpmI CTGGAG 2 cut(s) 1787, 2597
Bpu1102I GCTNAGC 1 cut(s) 2298
Bpu14I TTCGAA 2 cut(s) 381, 1564
BpuEI CTTGAG 1 cut(s) 538
BpuMI CCSGG 1 cut(s) 2272
Bsa29I ATCGAT 1 cut(s) 48
BsaBI GATNNNNATC 1 cut(s) 762
BsaHI GRCGYC 2 cut(s) 1926, 2264
BsaJI CCNNGG 2 cut(s) 2193, 2306
BsaWI WCCGGW 3 cut(s) 409, 1718, 1976
Bsc4I CCNNNNNNNGG 3 cut(s) 186, 2135, 2277
Bse1I ACTGG 6 cut(s) 28, 216, 258, 566, 1062, 1986
Bse8I GATNNNNATC 1 cut(s) 762
BseAI TCCGGA 1 cut(s) 1718
BseBI CCWGG 1 cut(s) 2469
BseCI ATCGAT 1 cut(s) 48
BseDI CCNNGG 2 cut(s) 2193, 2306
BseJI GATNNNNATC 1 cut(s) 762
BseLI CCNNNNNNNGG 3 cut(s) 186, 2135, 2277
BseMII CTCAG 2 cut(s) 282, 1853
BseNI ACTGG 6 cut(s) 28, 216, 258, 566, 1062, 1986
BseRI GAGGAG 9 cut(s) 240, 243, 246, 561, 708, 1299, 1395, 1491, 2081
BseXI GCAGC 5 cut(s) 965, 1832, 2122, 2432, 2570
Bsh1236I CGCG 3 cut(s) 1923, 1956, 2602
BshFI GGCC 3 cut(s) 1798, 2078, 2467
BshVI ATCGAT 1 cut(s) 48
BsiHKAI GWGCWC 2 cut(s) 2046, 2543
BsiHKCI CYCGRG 3 cut(s) 633, 780, 2192
BsiSI CCGG 4 cut(s) 410, 1719, 1977, 2271
BsiWI CGTACG 1 cut(s) 1679
BslI CCNNNNNNNGG 3 cut(s) 186, 2135, 2277
BsmAI GTCTC 2 cut(s) 543, 857
BsnI GGCC 3 cut(s) 1798, 2078, 2467
BsoBI CYCGRG 3 cut(s) 633, 780, 2192
Bsp119I TTCGAA 2 cut(s) 381, 1564
Bsp1286I GDGCHC 2 cut(s) 2046, 2543
Bsp13I TCCGGA 1 cut(s) 1718
Bsp1720I GCTNAGC 1 cut(s) 2298
BspANI GGCC 3 cut(s) 1798, 2078, 2467
BspCNI CTCAG 2 cut(s) 281, 1854
BspDI ATCGAT 1 cut(s) 48
BspEI TCCGGA 1 cut(s) 1718
BspFNI CGCG 3 cut(s) 1923, 1956, 2602
BspLI GGNNCC 2 cut(s) 2103, 2292
BspMI ACCTGC 1 cut(s) 2260
BspT104I TTCGAA 2 cut(s) 381, 1564
BsrBI CCGCTC 1 cut(s) 2339
BsrI ACTGG 6 cut(s) 28, 216, 258, 566, 1062, 1986
BssECI CCNNGG 2 cut(s) 2193, 2306
BssNI GRCGYC 2 cut(s) 1926, 2264
BssSI CACGAG 1 cut(s) 984
BssT1I CCWWGG 1 cut(s) 2306
Bst2BI CACGAG 1 cut(s) 984
Bst2UI CCWGG 1 cut(s) 2469
Bst4CI ACNGT 2 cut(s) 972, 1659
Bst6I CTCTTC 3 cut(s) 837, 1806, 2385
BstACI GRCGYC 2 cut(s) 1926, 2264
BstBI TTCGAA 2 cut(s) 381, 1564
BstC8I GCNNGC 1 cut(s) 623
BstDEI CTNAG 3 cut(s) 268, 1862, 2298
BstFNI CGCG 3 cut(s) 1923, 1956, 2602
BstH2I RGCGCY 1 cut(s) 2248
BstHHI GCGC 2 cut(s) 1958, 2247
BstMAI GTCTC 2 cut(s) 543, 857
BstMWI GCNNNNNNNGC 3 cut(s) 2025, 2261, 2308
BstNI CCWGG 1 cut(s) 2469
BstPAI GACNNNNGTC 1 cut(s) 1681
BstSCI CCNGG 2 cut(s) 2270, 2467
BstUI CGCG 3 cut(s) 1923, 1956, 2602
BstV1I GCAGC 5 cut(s) 965, 1832, 2122, 2432, 2570
BstV2I GAAGAC 1 cut(s) 1957
BstX2I RGATCY 4 cut(s) 310, 412, 2101, 2359
BstYI RGATCY 4 cut(s) 310, 412, 2101, 2359
Bsu15I ATCGAT 1 cut(s) 48
BsuI GTATCC 1 cut(s) 13
BsuRI GGCC 3 cut(s) 1798, 2078, 2467
BsuTUI ATCGAT 1 cut(s) 48
BtgZI GCGATG 4 cut(s) 405, 456, 602, 1440
BtsIMutI CAGTG 5 cut(s) 251, 968, 1055, 1805, 1993
BveI ACCTGC 1 cut(s) 2260
Cac8I GCNNGC 1 cut(s) 623
CaiI CAGNNNCTG 3 cut(s) 128, 1753, 1861
CfoI GCGC 2 cut(s) 1958, 2247
Cfr13I GGNCC 2 cut(s) 584, 2291
ClaI ATCGAT 1 cut(s) 48
CseI GACGC 3 cut(s) 1915, 2253, 2291
CviAII CATG 4 cut(s) 119, 1877, 1913, 1937
DdeI CTNAG 3 cut(s) 268, 1862, 2298
Eam1104I CTCTTC 3 cut(s) 837, 1806, 2385
EarI CTCTTC 3 cut(s) 837, 1806, 2385
EciI GGCGGA 1 cut(s) 272
Eco130I CCWWGG 1 cut(s) 2306
Eco47I GGWCC 2 cut(s) 584, 2291
Eco57I CTGAAG 2 cut(s) 47, 2199
Eco88I CYCGRG 3 cut(s) 633, 780, 2192
EcoO109I RGGNCCY 1 cut(s) 2291
EcoRI GAATTC 1 cut(s) 496
EcoRII CCWGG 1 cut(s) 2467
EcoT14I CCWWGG 1 cut(s) 2306
ErhI CCWWGG 1 cut(s) 2306
FaeI CATG 4 cut(s) 122, 1880, 1916, 1940
FatI CATG 4 cut(s) 118, 1876, 1912, 1936
FbaI TGATCA 1 cut(s) 760
Fnu4HI GCNGC 9 cut(s) 954, 1796, 1846, 1924, 2111, 2340, 2421, 2443, 2559
Fsp4HI GCNGC 9 cut(s) 954, 1796, 1846, 1924, 2111, 2340, 2421, 2443, 2559
GlaI GCGC 2 cut(s) 1957, 2246
GluI GCNGC 9 cut(s) 954, 1796, 1846, 1924, 2111, 2340, 2421, 2443, 2559
GsuI CTGGAG 2 cut(s) 1787, 2597
HaeII RGCGCY 1 cut(s) 2248
HaeIII GGCC 3 cut(s) 1798, 2078, 2467
HapII CCGG 4 cut(s) 410, 1719, 1977, 2271
HgaI GACGC 3 cut(s) 1915, 2253, 2291
HhaI GCGC 2 cut(s) 1958, 2247
Hin1I GRCGYC 2 cut(s) 1926, 2264
Hin1II CATG 4 cut(s) 122, 1880, 1916, 1940
Hin6I GCGC 2 cut(s) 1956, 2245
HinP1I GCGC 2 cut(s) 1956, 2245
HpaII CCGG 4 cut(s) 410, 1719, 1977, 2271
HphI GGTGA 2 cut(s) 1442, 2374
Hpy166II GTNNAC 3 cut(s) 455, 1991, 2371
Hpy8I GTNNAC 3 cut(s) 455, 1991, 2371
Hpy99I CGWCG 2 cut(s) 1956, 2269
HpyAV CCTTC 7 cut(s) 71, 1085, 1721, 2075, 2281, 2327, 2575
HpyCH4III ACNGT 2 cut(s) 972, 1659
HpyCH4IV ACGT 4 cut(s) 1678, 1682, 1790, 1951
HpyCH4V TGCA 7 cut(s) 54, 122, 899, 1502, 1606, 1940, 2110
HpyF10VI GCNNNNNNNGC 3 cut(s) 2025, 2261, 2308
HpyF3I CTNAG 3 cut(s) 268, 1862, 2298
HpySE526I ACGT 4 cut(s) 1678, 1682, 1790, 1951
Hsp92I GRCGYC 2 cut(s) 1926, 2264
Hsp92II CATG 4 cut(s) 122, 1880, 1916, 1940
HspAI GCGC 2 cut(s) 1956, 2245
Kpn2I TCCGGA 1 cut(s) 1718
Ksp22I TGATCA 1 cut(s) 760
Lsp1109I GCAGC 5 cut(s) 965, 1832, 2122, 2432, 2570
MaeII ACGT 4 cut(s) 1678, 1682, 1790, 1951
MaeIII GTNAC 1 cut(s) 981
MbiI CCGCTC 1 cut(s) 2339
MfeI CAATTG 1 cut(s) 2096
MflI RGATCY 4 cut(s) 310, 412, 2101, 2359
MhlI GDGCHC 2 cut(s) 2046, 2543
MlyI GAGTC 4 cut(s) 247, 545, 854, 859
MmeI TCCRAC 3 cut(s) 63, 266, 2116
MroI TCCGGA 1 cut(s) 1718
MroXI GAANNNNTTC 4 cut(s) 1367, 1525, 2163, 2187
MseI TTAA 4 cut(s) 174, 561, 1050, 1395
MslI CAYNNNNRTG 1 cut(s) 117
MspA1I CMGCKG 1 cut(s) 2423
MspI CCGG 4 cut(s) 410, 1719, 1977, 2271
MspR9I CCNGG 2 cut(s) 2272, 2469
MunI CAATTG 1 cut(s) 2096
MvaI CCWGG 1 cut(s) 2469
MvnI CGCG 3 cut(s) 1923, 1956, 2602
MwoI GCNNNNNNNGC 3 cut(s) 2025, 2261, 2308
NciI CCSGG 1 cut(s) 2272
NlaIII CATG 4 cut(s) 122, 1880, 1916, 1940
NlaIV GGNNCC 2 cut(s) 2103, 2292
NmuCI GTSAC 1 cut(s) 981
NspV TTCGAA 2 cut(s) 381, 1564
PaeR7I CTCGAG 1 cut(s) 633
PcsI WCGNNNNNNNCGW 1 cut(s) 1819
PdmI GAANNNNTTC 4 cut(s) 1367, 1525, 2163, 2187
Pfl23II CGTACG 1 cut(s) 1679
PfoI TCCNGGA 1 cut(s) 2270
PkrI GCNGC 9 cut(s) 955, 1797, 1847, 1925, 2112, 2341, 2422, 2444, 2560
PleI GAGTC 4 cut(s) 246, 545, 853, 858
PpsI GAGTC 4 cut(s) 246, 545, 853, 858
PpuMI RGGWCCY 1 cut(s) 2291
PshAI GACNNNNGTC 1 cut(s) 1681
PshBI ATTAAT 2 cut(s) 561, 1395
Psp5II RGGWCCY 1 cut(s) 2291
Psp6I CCWGG 1 cut(s) 2467
PspGI CCWGG 1 cut(s) 2467
PspLI CGTACG 1 cut(s) 1679
PspN4I GGNNCC 2 cut(s) 2103, 2292
PspPI GGNCC 2 cut(s) 584, 2291
PspPPI RGGWCCY 1 cut(s) 2291
PstNI CAGNNNCTG 3 cut(s) 128, 1753, 1861
PsuI RGATCY 4 cut(s) 310, 412, 2101, 2359
PvuII CAGCTG 1 cut(s) 2423
RseI CAYNNNNRTG 1 cut(s) 117
SaqAI TTAA 4 cut(s) 174, 561, 1050, 1395
SatI GCNGC 9 cut(s) 954, 1796, 1846, 1924, 2111, 2340, 2421, 2443, 2559
Sau96I GGNCC 2 cut(s) 584, 2291
ScaI AGTACT 5 cut(s) 706, 994, 1201, 1297, 1489
SchI GAGTC 4 cut(s) 247, 545, 854, 859
ScrFI CCNGG 2 cut(s) 2272, 2469
SduI GDGCHC 2 cut(s) 2046, 2543
Sfr274I CTCGAG 1 cut(s) 633
SfuI TTCGAA 2 cut(s) 381, 1564
SinI GGWCC 2 cut(s) 584, 2291
SlaI CTCGAG 1 cut(s) 633
SmiMI CAYNNNNRTG 1 cut(s) 117
SmlI CTYRAG 2 cut(s) 553, 633
SmoI CTYRAG 2 cut(s) 553, 633
SpeI ACTAGT 1 cut(s) 1249
SspI AATATT 2 cut(s) 397, 1221
StyD4I CCNGG 2 cut(s) 2270, 2467
StyI CCWWGG 1 cut(s) 2306
TaaI ACNGT 2 cut(s) 972, 1659
TaiI ACGT 4 cut(s) 1681, 1685, 1793, 1954
TatI WGTACW 8 cut(s) 97, 704, 743, 992, 1199, 1295, 1430, 1487
TauI GCSGC 4 cut(s) 1798, 1926, 2342, 2445
Tru1I TTAA 4 cut(s) 174, 561, 1050, 1395
Tru9I TTAA 4 cut(s) 174, 561, 1050, 1395
TscAI CASTG 5 cut(s) 258, 975, 1062, 1812, 1993
TseFI GTSAC 1 cut(s) 981
TseI GCWGC 5 cut(s) 953, 1845, 2110, 2420, 2558
Tsp45I GTSAC 1 cut(s) 981
TspGWI ACGGA 4 cut(s) 374, 1639, 2299, 2354
TspRI CASTG 5 cut(s) 258, 975, 1062, 1812, 1993
VpaK11BI GGWCC 2 cut(s) 584, 2291
VspI ATTAAT 2 cut(s) 561, 1395
XapI RAATTY 8 cut(s) 427, 496, 870, 1314, 1901, 1908, 2227, 2506
XhoI CTCGAG 1 cut(s) 633
XmaJI CCTAGG 1 cut(s) 2306
XmnI GAANNNNTTC 4 cut(s) 1367, 1525, 2163, 2187
ZrmI AGTACT 5 cut(s) 706, 994, 1201, 1297, 1489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.