Rmu_co8321009.1_g000001

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8321009.1
Physical Location & Seq
Forward (+)
95 .. 910
816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8321009.1_g000001.1.cds

Sequence Viewer

Length: 816 bp
atggccctcgaagctcttaactctccgactgccgccggccaaggcttccactacgacgagcccaagctccagtactcggagccatggaccaagcgcaagcgctccaagcgtccacgaagcgtagagcagagtcagcagactcaagtctctgaggaggagtatctcgctatctgcctcatcatgctcgctcgcggtggtcacagcggaggacccatcaccgccgccgcctcacaccgcagtcagtctccggttccaagtgtttctcctgtcattgaacaggccacgtcagcaccggccaaggagaatcagctgcccagttacaagtgctctgtttgtgacaagacttttccctcgtaccaggctctgggtggacacaaggccagccacaggaagggctcttccgccgtcaccggcggcgaaggaccctccacgtcatccaccaccaccaccacatccgccgccaccgtctccaacgcctccggtaggtcccacgagtgctccatctgccacaagtctttccccaccggccaggccttgggcggacacaagcggtgccactacgagggcggcgccaccgccaccaggtccgccgcaaccaccagcgccgtgaccacctcggagggagtggggtctaccactcacaccgtcagccagagccaccaacaccgcgaagcgtttgatctgaacttaccggccttcccggagccgttgtcaaggaatttcttcctctccggcgacgacgaggtggagagcccacatccgacgaagaagccccgtctattcatgacccctaaagttgagatatcactcaattag

Protein Analysis

271

Amino Acids

28.82

Weight (kDa)

8.72

Isoelectric Point (pI)

72.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 552, 569
AccB7I CCANNNNNTGG 2 cut(s) 364, 535
AccI GTMKAC 1 cut(s) 632
AccII CGCG 2 cut(s) 192, 669
AcoI YGGCCR 3 cut(s) 37, 294, 526
AcsI RAATTY 1 cut(s) 718
AcyI GRCGYC 1 cut(s) 570
AfaI GTAC 2 cut(s) 74, 356
AfeI AGCGCT 1 cut(s) 101
AfiI CCNNNNNNNGG 8 cut(s) 76, 364, 387, 391, 483, 535, 562, 582
AgsI TTSAA 1 cut(s) 275
AjiI CACGTC 2 cut(s) 285, 432
AjnI CCWGG 3 cut(s) 357, 528, 581
AluBI AGCT 3 cut(s) 14, 67, 310
AluI AGCT 3 cut(s) 14, 67, 310
Alw21I GWGCWC 2 cut(s) 329, 500
Alw26I GTCTC 3 cut(s) 151, 249, 472
AlwNI CAGNNNCTG 1 cut(s) 364
Aor51HI AGCGCT 1 cut(s) 101
AoxI GGCC 8 cut(s) 3, 37, 279, 294, 378, 526, 531, 693
ApeKI GCWGC 1 cut(s) 310
ApoI RAATTY 1 cut(s) 718
Asp700I GAANNNNTTC 1 cut(s) 722
AspLEI GCGC 4 cut(s) 96, 102, 572, 605
AspS9I GGNCC 6 cut(s) 4, 87, 209, 422, 486, 585
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 2 cut(s) 208, 400
AvaII GGWCC 5 cut(s) 87, 209, 422, 486, 585
BanI GGYRCC 2 cut(s) 552, 569
BanII GRGCYC 3 cut(s) 63, 398, 755
BauI CACGAG 1 cut(s) 491
Bbv12I GWGCWC 2 cut(s) 329, 500
BbvI GCAGC 1 cut(s) 297
BccI CCATC 2 cut(s) 221, 509
BceAI ACGGC 3 cut(s) 389, 590, 691
BciT130I CCWGG 3 cut(s) 359, 530, 583
BcnI CCSGG 1 cut(s) 701
BcoDI GTCTC 3 cut(s) 151, 249, 472
BfoI RGCGCY 3 cut(s) 103, 573, 606
BisI GCNGC 8 cut(s) 33, 222, 225, 311, 415, 459, 568, 591
BlsI GCNGC 8 cut(s) 34, 223, 226, 312, 416, 460, 569, 592
BmcAI AGTACT 1 cut(s) 74
Bme1390I CCNGG 4 cut(s) 359, 530, 583, 701
Bme18I GGWCC 5 cut(s) 87, 209, 422, 486, 585
BmgBI CACGTC 2 cut(s) 285, 432
BmgT120I GGNCC 6 cut(s) 4, 87, 209, 422, 486, 585
BmiI GGNNCC 8 cut(s) 81, 211, 252, 424, 488, 554, 571, 705
BmrFI CCNGG 4 cut(s) 359, 530, 583, 701
BmrI ACTGGG 1 cut(s) 309
BmuI ACTGGG 1 cut(s) 309
BoxI GACNNNNGTC 1 cut(s) 143
BpmI CTGGAG 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 126
BpuMI CCSGG 1 cut(s) 701
BsaHI GRCGYC 1 cut(s) 570
BsaJI CCNNGG 5 cut(s) 40, 83, 297, 534, 615
BsaWI WCCGGW 2 cut(s) 247, 479
BsaXI ACNNNNNCTCC 4 cut(s) 482, 512, 695, 725
Bsc4I CCNNNNNNNGG 8 cut(s) 76, 364, 387, 391, 483, 535, 562, 582
Bse118I RCCGGY 5 cut(s) 35, 292, 410, 524, 691
Bse1I ACTGG 2 cut(s) 70, 315
BseBI CCWGG 3 cut(s) 359, 530, 583
BseDI CCNNGG 5 cut(s) 40, 83, 297, 534, 615
BseGI GGATG 3 cut(s) 434, 452, 757
BseLI CCNNNNNNNGG 8 cut(s) 76, 364, 387, 391, 483, 535, 562, 582
BseMII CTCAG 1 cut(s) 141
BseNI ACTGG 2 cut(s) 70, 315
BseRI GAGGAG 2 cut(s) 167, 170
BseXI GCAGC 1 cut(s) 297
Bsh1236I CGCG 2 cut(s) 192, 669
BshFI GGCC 8 cut(s) 5, 39, 281, 296, 380, 528, 533, 695
BshNI GGYRCC 2 cut(s) 552, 569
BsiHKAI GWGCWC 2 cut(s) 329, 500
BsiSI CCGG 9 cut(s) 36, 248, 293, 411, 480, 525, 692, 701, 732
BslFI GGGAC 1 cut(s) 472
BslI CCNNNNNNNGG 8 cut(s) 76, 364, 387, 391, 483, 535, 562, 582
BsmAI GTCTC 3 cut(s) 151, 249, 472
BsmBI CGTCTC 1 cut(s) 472
BsmFI GGGAC 1 cut(s) 472
BsnI GGCC 8 cut(s) 5, 39, 281, 296, 380, 528, 533, 695
Bsp1286I GDGCHC 5 cut(s) 63, 329, 398, 500, 755
Bsp143I GATC 1 cut(s) 679
Bsp19I CCATGG 1 cut(s) 83
BspANI GGCC 8 cut(s) 5, 39, 281, 296, 380, 528, 533, 695
BspCNI CTCAG 1 cut(s) 142
BspFNI CGCG 2 cut(s) 192, 669
BspHI TCATGA 1 cut(s) 783
BspLI GGNNCC 8 cut(s) 81, 211, 252, 424, 488, 554, 571, 705
BspQI GCTCTTC 1 cut(s) 403
BspT107I GGYRCC 2 cut(s) 552, 569
BsrFI RCCGGY 5 cut(s) 35, 292, 410, 524, 691
BsrI ACTGG 2 cut(s) 70, 315
BssAI RCCGGY 5 cut(s) 35, 292, 410, 524, 691
BssECI CCNNGG 5 cut(s) 40, 83, 297, 534, 615
BssMI GATC 1 cut(s) 679
BssNI GRCGYC 1 cut(s) 570
BssSI CACGAG 1 cut(s) 491
BssT1I CCWWGG 4 cut(s) 40, 83, 297, 534
Bst2BI CACGAG 1 cut(s) 491
Bst2UI CCWGG 3 cut(s) 359, 530, 583
Bst4CI ACNGT 2 cut(s) 466, 646
Bst6I CTCTTC 1 cut(s) 403
BstACI GRCGYC 1 cut(s) 570
BstC8I GCNNGC 5 cut(s) 37, 98, 186, 190, 382
BstDEI CTNAG 1 cut(s) 150
BstDSI CCRYGG 1 cut(s) 83
BstENI CCTNNNNNAGG 1 cut(s) 481
BstF5I GGATG 3 cut(s) 434, 452, 757
BstFNI CGCG 2 cut(s) 192, 669
BstH2I RGCGCY 3 cut(s) 103, 573, 606
BstHHI GCGC 4 cut(s) 96, 102, 572, 605
BstKTI GATC 1 cut(s) 682
BstMAI GTCTC 3 cut(s) 151, 249, 472
BstMBI GATC 1 cut(s) 679
BstMWI GCNNNNNNNGC 5 cut(s) 11, 106, 133, 287, 504
BstNI CCWGG 3 cut(s) 359, 530, 583
BstPAI GACNNNNGTC 1 cut(s) 143
BstSCI CCNGG 4 cut(s) 357, 528, 581, 699
BstUI CGCG 2 cut(s) 192, 669
BstV1I GCAGC 1 cut(s) 297
BsuRI GGCC 8 cut(s) 5, 39, 281, 296, 380, 528, 533, 695
BtgI CCRYGG 1 cut(s) 83
BtrI CACGTC 2 cut(s) 285, 432
BtsCI GGATG 3 cut(s) 434, 452, 757
Cac8I GCNNGC 5 cut(s) 37, 98, 186, 190, 382
CaiI CAGNNNCTG 1 cut(s) 364
CciI TCATGA 1 cut(s) 783
CfoI GCGC 4 cut(s) 96, 102, 572, 605
Cfr10I RCCGGY 5 cut(s) 35, 292, 410, 524, 691
Cfr13I GGNCC 6 cut(s) 4, 87, 209, 422, 486, 585
CseI GACGC 1 cut(s) 98
CsiI ACCWGGT 1 cut(s) 581
Csp6I GTAC 2 cut(s) 73, 355
CviAII CATG 3 cut(s) 84, 181, 784
CviQI GTAC 2 cut(s) 73, 355
DdeI CTNAG 1 cut(s) 150
DinI GGCGCC 1 cut(s) 571
DpnI GATC 1 cut(s) 681
DpnII GATC 1 cut(s) 679
EaeI YGGCCR 3 cut(s) 37, 294, 526
Eam1104I CTCTTC 1 cut(s) 403
EarI CTCTTC 1 cut(s) 403
EciI GGCGGA 4 cut(s) 391, 445, 555, 577
Eco130I CCWWGG 4 cut(s) 40, 83, 297, 534
Eco147I AGGCCT 1 cut(s) 533
Eco24I GRGCYC 3 cut(s) 63, 398, 755
Eco32I GATATC 1 cut(s) 804
Eco47I GGWCC 5 cut(s) 87, 209, 422, 486, 585
Eco47III AGCGCT 1 cut(s) 101
EcoNI CCTNNNNNAGG 1 cut(s) 481
EcoO109I RGGNCCY 3 cut(s) 209, 422, 486
EcoRII CCWGG 3 cut(s) 357, 528, 581
EcoRV GATATC 1 cut(s) 804
EcoT14I CCWWGG 4 cut(s) 40, 83, 297, 534
EcoT38I GRGCYC 3 cut(s) 63, 398, 755
EgeI GGCGCC 1 cut(s) 571
EheI GGCGCC 1 cut(s) 571
ErhI CCWWGG 4 cut(s) 40, 83, 297, 534
Esp3I CGTCTC 1 cut(s) 472
FaeI CATG 3 cut(s) 87, 184, 787
FaiI YATR 3 cut(s) 85, 182, 785
FaqI GGGAC 1 cut(s) 472
FatI CATG 3 cut(s) 83, 180, 783
FblI GTMKAC 1 cut(s) 632
Fnu4HI GCNGC 8 cut(s) 33, 222, 225, 311, 415, 459, 568, 591
FokI GGATG 3 cut(s) 421, 439, 744
FriOI GRGCYC 3 cut(s) 63, 398, 755
Fsp4HI GCNGC 8 cut(s) 33, 222, 225, 311, 415, 459, 568, 591
GlaI GCGC 4 cut(s) 95, 101, 571, 604
GluI GCNGC 8 cut(s) 33, 222, 225, 311, 415, 459, 568, 591
GsuI CTGGAG 1 cut(s) 53
HaeII RGCGCY 3 cut(s) 103, 573, 606
HaeIII GGCC 8 cut(s) 5, 39, 281, 296, 380, 528, 533, 695
HapII CCGG 9 cut(s) 36, 248, 293, 411, 480, 525, 692, 701, 732
HgaI GACGC 1 cut(s) 98
HhaI GCGC 4 cut(s) 96, 102, 572, 605
Hin1I GRCGYC 1 cut(s) 570
Hin1II CATG 3 cut(s) 87, 184, 787
Hin6I GCGC 4 cut(s) 94, 100, 570, 603
HinP1I GCGC 4 cut(s) 94, 100, 570, 603
HinfI GANTC 3 cut(s) 130, 139, 304
HpaII CCGG 9 cut(s) 36, 248, 293, 411, 480, 525, 692, 701, 732
HphI GGTGA 2 cut(s) 208, 400
Hpy166II GTNNAC 3 cut(s) 113, 371, 633
Hpy188I TCNGA 6 cut(s) 27, 79, 151, 619, 684, 762
Hpy188III TCNNGA 1 cut(s) 784
Hpy8I GTNNAC 3 cut(s) 113, 371, 633
Hpy99I CGWCG 4 cut(s) 59, 740, 743, 766
HpyAV CCTTC 3 cut(s) 385, 413, 706
HpyCH4III ACNGT 2 cut(s) 466, 646
HpyCH4IV ACGT 2 cut(s) 284, 431
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 106, 133, 287, 504
HpyF3I CTNAG 1 cut(s) 150
HpySE526I ACGT 2 cut(s) 284, 431
Hsp92I GRCGYC 1 cut(s) 570
Hsp92II CATG 3 cut(s) 87, 184, 787
HspAI GCGC 4 cut(s) 94, 100, 570, 603
KasI GGCGCC 1 cut(s) 569
KroI GCCGGC 1 cut(s) 35
KroNI GCCGGC 1 cut(s) 37
Kzo9I GATC 1 cut(s) 679
LguI GCTCTTC 1 cut(s) 403
LmnI GCTCC 5 cut(s) 72, 79, 107, 503, 703
Lsp1109I GCAGC 1 cut(s) 297
MabI ACCWGGT 1 cut(s) 581
MaeII ACGT 2 cut(s) 284, 431
MaeIII GTNAC 5 cut(s) 197, 317, 335, 406, 607
MalI GATC 1 cut(s) 681
MboI GATC 1 cut(s) 679
MboII GAAGA 3 cut(s) 390, 715, 778
MhlI GDGCHC 5 cut(s) 63, 329, 398, 500, 755
MluCI AATT 2 cut(s) 718, 811
Mly113I GGCGCC 1 cut(s) 570
MlyI GAGTC 2 cut(s) 133, 139
MmeI TCCRAC 3 cut(s) 50, 495, 785
MroNI GCCGGC 1 cut(s) 35
MroXI GAANNNNTTC 1 cut(s) 722
MseI TTAA 1 cut(s) 18
MspA1I CMGCKG 2 cut(s) 204, 310
MspI CCGG 9 cut(s) 36, 248, 293, 411, 480, 525, 692, 701, 732
MspR9I CCNGG 4 cut(s) 359, 530, 583, 701
MvaI CCWGG 3 cut(s) 359, 530, 583
MvnI CGCG 2 cut(s) 192, 669
MwoI GCNNNNNNNGC 5 cut(s) 11, 106, 133, 287, 504
NaeI GCCGGC 1 cut(s) 37
NarI GGCGCC 1 cut(s) 570
NciI CCSGG 1 cut(s) 701
NcoI CCATGG 1 cut(s) 83
NdeII GATC 1 cut(s) 679
NgoMIV GCCGGC 1 cut(s) 35
NlaIII CATG 3 cut(s) 87, 184, 787
NlaIV GGNNCC 8 cut(s) 81, 211, 252, 424, 488, 554, 571, 705
NmuCI GTSAC 4 cut(s) 197, 335, 406, 607
PagI TCATGA 1 cut(s) 783
PceI AGGCCT 1 cut(s) 533
PciSI GCTCTTC 1 cut(s) 403
PdiI GCCGGC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 722
PfeI GAWTC 1 cut(s) 304
PflMI CCANNNNNTGG 2 cut(s) 364, 535
PfoI TCCNGGA 1 cut(s) 699
PkrI GCNGC 8 cut(s) 34, 223, 226, 312, 416, 460, 569, 592
PleI GAGTC 2 cut(s) 133, 138
PluTI GGCGCC 1 cut(s) 573
PpsI GAGTC 2 cut(s) 133, 138
PpuMI RGGWCCY 3 cut(s) 209, 422, 486
PshAI GACNNNNGTC 1 cut(s) 143
Psp5II RGGWCCY 3 cut(s) 209, 422, 486
Psp6I CCWGG 3 cut(s) 357, 528, 581
PspGI CCWGG 3 cut(s) 357, 528, 581
PspN4I GGNNCC 8 cut(s) 81, 211, 252, 424, 488, 554, 571, 705
PspPI GGNCC 6 cut(s) 4, 87, 209, 422, 486, 585
PspPPI RGGWCCY 3 cut(s) 209, 422, 486
PstNI CAGNNNCTG 1 cut(s) 364
PvuII CAGCTG 1 cut(s) 310
RsaI GTAC 2 cut(s) 74, 356
RsaNI GTAC 2 cut(s) 73, 355
SapI GCTCTTC 1 cut(s) 403
SaqAI TTAA 1 cut(s) 18
SatI GCNGC 8 cut(s) 33, 222, 225, 311, 415, 459, 568, 591
Sau3AI GATC 1 cut(s) 679
Sau96I GGNCC 6 cut(s) 4, 87, 209, 422, 486, 585
ScaI AGTACT 1 cut(s) 74
SchI GAGTC 2 cut(s) 133, 139
ScrFI CCNGG 4 cut(s) 359, 530, 583, 701
SduI GDGCHC 5 cut(s) 63, 329, 398, 500, 755
SetI ASST 9 cut(s) 16, 69, 287, 312, 434, 488, 587, 617, 747
SexAI ACCWGGT 1 cut(s) 581
SfoI GGCGCC 1 cut(s) 571
SgrAI CRCCGGYG 1 cut(s) 410
SinI GGWCC 5 cut(s) 87, 209, 422, 486, 585
SmlI CTYRAG 1 cut(s) 141
SmoI CTYRAG 1 cut(s) 141
Sse9I AATT 2 cut(s) 718, 811
SseBI AGGCCT 1 cut(s) 533
SspDI GGCGCC 1 cut(s) 569
StuI AGGCCT 1 cut(s) 533
StyD4I CCNGG 4 cut(s) 357, 528, 581, 699
StyI CCWWGG 4 cut(s) 40, 83, 297, 534
TaaI ACNGT 2 cut(s) 466, 646
TaiI ACGT 2 cut(s) 287, 434
TaqI TCGA 1 cut(s) 9
TasI AATT 2 cut(s) 718, 811
TatI WGTACW 1 cut(s) 72
TauI GCSGC 7 cut(s) 35, 224, 227, 417, 461, 570, 593
TfiI GAWTC 1 cut(s) 304
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
TseFI GTSAC 4 cut(s) 197, 335, 406, 607
TseI GCWGC 1 cut(s) 310
Tsp45I GTSAC 4 cut(s) 197, 335, 406, 607
TspDTI ATGAA 1 cut(s) 772
Van91I CCANNNNNTGG 2 cut(s) 364, 535
VpaK11BI GGWCC 5 cut(s) 87, 209, 422, 486, 585
XagI CCTNNNNNAGG 1 cut(s) 481
XapI RAATTY 1 cut(s) 718
XcmI CCANNNNNNNNNTGG 1 cut(s) 365
XmiI GTMKAC 1 cut(s) 632
XmnI GAANNNNTTC 1 cut(s) 722
ZrmI AGTACT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.