Rh6CG499000

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
66330065 .. 66332419
2355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG499000.1

Sequence Viewer

Length: 801 bp
ATGGCCCTCGAAGCTCTTAACTCTCCGACTGCCGCCGGCCAAGGCTTCCACTACGACGAGCCCAAGCTCCAGTACTCGGAGCCATGGACCAAGCGCAAGCGCTCCAAGCGTCCACGAAGCGTAGAGCAGACTCAAGTCTCTGAGGAGGAGTATCTCGCTCTCTGCCTCATCATGCTCGCTCGCGGCGGTAACAGCGGAGGACCCATCACCGCCTCACACCGCAGTCAGTCTCCGGTTCCAAGTGTTTCTCCTGTTATTGAACAGGCCACGTCAGCACCGGCCAAGGAGAATCAGCTGCTCAGTTACAAGTGCTCTGTTTGTGACAAGACTTTTCCCTCGTACCAGGCTCTGGGTGGACACAAGGCCAGCCACAGGAAGGGATCTTCCGCCGTCACCGGCGGCGAAGGACCCTCCACGTCATCCACCACCACCACCACATCCACCGTCACCGTCTCCAACGCCTCCGGTAGGTCCCACGAGTGCTCCATCTGCCACAAGTCTTTCCCCACCGGCCAGGCATTGGGAGGACACAAGCGGTGCCACTACGAGGGCGGCACCACCACCACCAGGTCCGCCGCAACCACCAGCGCCGTGACCACCTCGGAGGGAGTGGGGTCTACCACTCACACCGTCAGCCAGAGCCACCAACACCGCGAAGCGTTTGATCTGAACTTACCGGCCTTCCCGGAGCCGTTGTCAAGGAATTTCTTCCTCTCCGGCGACGACGAGGTGGAGAGCCCACATCCGACGAAGAAGCCCCGTCTATTCATGACCCCTAAAGTTGAGATATCACTCAATTAG

Protein Analysis

266

Amino Acids

28.45

Weight (kDa)

8.71

Isoelectric Point (pI)

68.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 102 - 126 5.5e-14 C2H2-type zinc finger
zf-C2H2_6 PF13912 159 - 182 7.4e-12 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 537, 554
AccB7I CCANNNNNTGG 2 cut(s) 349, 520
AccI GTMKAC 1 cut(s) 617
AccII CGCG 2 cut(s) 183, 654
AclWI GGATC 1 cut(s) 388
AcoI YGGCCR 3 cut(s) 37, 279, 511
AcsI RAATTY 1 cut(s) 703
AfaI GTAC 2 cut(s) 74, 341
AfeI AGCGCT 1 cut(s) 101
AfiI CCNNNNNNNGG 8 cut(s) 76, 349, 372, 376, 468, 520, 547, 567
AgsI TTSAA 1 cut(s) 260
AjiI CACGTC 2 cut(s) 270, 417
AjnI CCWGG 3 cut(s) 342, 513, 566
AluBI AGCT 3 cut(s) 14, 67, 295
AluI AGCT 3 cut(s) 14, 67, 295
Alw21I GWGCWC 2 cut(s) 314, 485
Alw26I GTCTC 3 cut(s) 142, 234, 457
AlwI GGATC 1 cut(s) 388
AlwNI CAGNNNCTG 1 cut(s) 349
Aor51HI AGCGCT 1 cut(s) 101
AoxI GGCC 7 cut(s) 3, 37, 264, 279, 363, 511, 678
ApeKI GCWGC 1 cut(s) 295
ApoI RAATTY 1 cut(s) 703
Asp700I GAANNNNTTC 1 cut(s) 707
AspLEI GCGC 3 cut(s) 96, 102, 590
AspS9I GGNCC 6 cut(s) 4, 87, 200, 407, 471, 570
AsuC2I CCSGG 1 cut(s) 686
AsuHPI GGTGA 3 cut(s) 199, 385, 439
AvaII GGWCC 5 cut(s) 87, 200, 407, 471, 570
BanI GGYRCC 2 cut(s) 537, 554
BanII GRGCYC 2 cut(s) 63, 740
BauI CACGAG 1 cut(s) 476
Bbv12I GWGCWC 2 cut(s) 314, 485
BbvI GCAGC 1 cut(s) 282
BccI CCATC 2 cut(s) 212, 494
BceAI ACGGC 3 cut(s) 374, 575, 676
BciT130I CCWGG 3 cut(s) 344, 515, 568
BcnI CCSGG 1 cut(s) 686
BcoDI GTCTC 3 cut(s) 142, 234, 457
BfoI RGCGCY 2 cut(s) 103, 591
BisI GCNGC 6 cut(s) 33, 184, 296, 400, 553, 576
BlsI GCNGC 6 cut(s) 34, 185, 297, 401, 554, 577
BmcAI AGTACT 1 cut(s) 74
Bme1390I CCNGG 4 cut(s) 344, 515, 568, 686
Bme18I GGWCC 5 cut(s) 87, 200, 407, 471, 570
BmgBI CACGTC 2 cut(s) 270, 417
BmgT120I GGNCC 6 cut(s) 4, 87, 200, 407, 471, 570
BmiI GGNNCC 8 cut(s) 81, 202, 237, 409, 473, 539, 556, 690
BmrFI CCNGG 4 cut(s) 344, 515, 568, 686
BoxI GACNNNNGTC 1 cut(s) 134
BpmI CTGGAG 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 117
BpuMI CCSGG 1 cut(s) 686
BsaJI CCNNGG 4 cut(s) 40, 83, 282, 600
BsaWI WCCGGW 2 cut(s) 232, 464
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 680, 710
Bsc4I CCNNNNNNNGG 8 cut(s) 76, 349, 372, 376, 468, 520, 547, 567
Bse118I RCCGGY 5 cut(s) 35, 277, 395, 509, 676
Bse1I ACTGG 1 cut(s) 70
BseBI CCWGG 3 cut(s) 344, 515, 568
BseDI CCNNGG 4 cut(s) 40, 83, 282, 600
BseGI GGATG 3 cut(s) 419, 437, 742
BseLI CCNNNNNNNGG 8 cut(s) 76, 349, 372, 376, 468, 520, 547, 567
BseMII CTCAG 2 cut(s) 132, 313
BseNI ACTGG 1 cut(s) 70
BseRI GAGGAG 2 cut(s) 158, 161
BseXI GCAGC 1 cut(s) 282
Bsh1236I CGCG 2 cut(s) 183, 654
BshFI GGCC 7 cut(s) 5, 39, 266, 281, 365, 513, 680
BshNI GGYRCC 2 cut(s) 537, 554
BsiHKAI GWGCWC 2 cut(s) 314, 485
BsiSI CCGG 9 cut(s) 36, 233, 278, 396, 465, 510, 677, 686, 717
BslFI GGGAC 1 cut(s) 457
BslI CCNNNNNNNGG 8 cut(s) 76, 349, 372, 376, 468, 520, 547, 567
BsmAI GTCTC 3 cut(s) 142, 234, 457
BsmBI CGTCTC 1 cut(s) 457
BsmFI GGGAC 1 cut(s) 457
BsnI GGCC 7 cut(s) 5, 39, 266, 281, 365, 513, 680
Bsp1286I GDGCHC 4 cut(s) 63, 314, 485, 740
Bsp143I GATC 2 cut(s) 380, 664
Bsp19I CCATGG 1 cut(s) 83
BspANI GGCC 7 cut(s) 5, 39, 266, 281, 365, 513, 680
BspCNI CTCAG 2 cut(s) 133, 312
BspFNI CGCG 2 cut(s) 183, 654
BspHI TCATGA 1 cut(s) 768
BspLI GGNNCC 8 cut(s) 81, 202, 237, 409, 473, 539, 556, 690
BspPI GGATC 1 cut(s) 388
BspT107I GGYRCC 2 cut(s) 537, 554
BsrFI RCCGGY 5 cut(s) 35, 277, 395, 509, 676
BsrI ACTGG 1 cut(s) 70
BssAI RCCGGY 5 cut(s) 35, 277, 395, 509, 676
BssECI CCNNGG 4 cut(s) 40, 83, 282, 600
BssMI GATC 2 cut(s) 380, 664
BssSI CACGAG 1 cut(s) 476
BssT1I CCWWGG 3 cut(s) 40, 83, 282
Bst2BI CACGAG 1 cut(s) 476
Bst2UI CCWGG 3 cut(s) 344, 515, 568
Bst4CI ACNGT 3 cut(s) 445, 451, 631
BstC8I GCNNGC 5 cut(s) 37, 98, 177, 181, 367
BstDEI CTNAG 2 cut(s) 141, 299
BstDSI CCRYGG 1 cut(s) 83
BstENI CCTNNNNNAGG 1 cut(s) 466
BstF5I GGATG 3 cut(s) 419, 437, 742
BstFNI CGCG 2 cut(s) 183, 654
BstH2I RGCGCY 2 cut(s) 103, 591
BstHHI GCGC 3 cut(s) 96, 102, 590
BstKTI GATC 2 cut(s) 383, 667
BstMAI GTCTC 3 cut(s) 142, 234, 457
BstMBI GATC 2 cut(s) 380, 664
BstMWI GCNNNNNNNGC 5 cut(s) 11, 106, 192, 272, 489
BstNI CCWGG 3 cut(s) 344, 515, 568
BstPAI GACNNNNGTC 1 cut(s) 134
BstSCI CCNGG 4 cut(s) 342, 513, 566, 684
BstUI CGCG 2 cut(s) 183, 654
BstV1I GCAGC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 380
BstYI RGATCY 1 cut(s) 380
BsuRI GGCC 7 cut(s) 5, 39, 266, 281, 365, 513, 680
BtgI CCRYGG 1 cut(s) 83
BtrI CACGTC 2 cut(s) 270, 417
BtsCI GGATG 3 cut(s) 419, 437, 742
Cac8I GCNNGC 5 cut(s) 37, 98, 177, 181, 367
CaiI CAGNNNCTG 1 cut(s) 349
CciI TCATGA 1 cut(s) 768
CfoI GCGC 3 cut(s) 96, 102, 590
Cfr10I RCCGGY 5 cut(s) 35, 277, 395, 509, 676
Cfr13I GGNCC 6 cut(s) 4, 87, 200, 407, 471, 570
CseI GACGC 1 cut(s) 98
CsiI ACCWGGT 1 cut(s) 566
Csp6I GTAC 2 cut(s) 73, 340
CviAII CATG 3 cut(s) 84, 172, 769
CviQI GTAC 2 cut(s) 73, 340
DdeI CTNAG 2 cut(s) 141, 299
DpnI GATC 2 cut(s) 382, 666
DpnII GATC 2 cut(s) 380, 664
EaeI YGGCCR 3 cut(s) 37, 279, 511
EciI GGCGGA 2 cut(s) 376, 562
Eco130I CCWWGG 3 cut(s) 40, 83, 282
Eco24I GRGCYC 2 cut(s) 63, 740
Eco32I GATATC 1 cut(s) 789
Eco47I GGWCC 5 cut(s) 87, 200, 407, 471, 570
Eco47III AGCGCT 1 cut(s) 101
EcoNI CCTNNNNNAGG 1 cut(s) 466
EcoO109I RGGNCCY 3 cut(s) 200, 407, 471
EcoRII CCWGG 3 cut(s) 342, 513, 566
EcoRV GATATC 1 cut(s) 789
EcoT14I CCWWGG 3 cut(s) 40, 83, 282
EcoT38I GRGCYC 2 cut(s) 63, 740
ErhI CCWWGG 3 cut(s) 40, 83, 282
Esp3I CGTCTC 1 cut(s) 457
FaeI CATG 3 cut(s) 87, 175, 772
FaiI YATR 3 cut(s) 85, 173, 770
FaqI GGGAC 1 cut(s) 457
FatI CATG 3 cut(s) 83, 171, 768
FblI GTMKAC 1 cut(s) 617
Fnu4HI GCNGC 6 cut(s) 33, 184, 296, 400, 553, 576
FokI GGATG 3 cut(s) 406, 424, 729
FriOI GRGCYC 2 cut(s) 63, 740
Fsp4HI GCNGC 6 cut(s) 33, 184, 296, 400, 553, 576
GlaI GCGC 3 cut(s) 95, 101, 589
GluI GCNGC 6 cut(s) 33, 184, 296, 400, 553, 576
GsuI CTGGAG 1 cut(s) 53
HaeII RGCGCY 2 cut(s) 103, 591
HaeIII GGCC 7 cut(s) 5, 39, 266, 281, 365, 513, 680
HapII CCGG 9 cut(s) 36, 233, 278, 396, 465, 510, 677, 686, 717
HgaI GACGC 1 cut(s) 98
HhaI GCGC 3 cut(s) 96, 102, 590
Hin1II CATG 3 cut(s) 87, 175, 772
Hin6I GCGC 3 cut(s) 94, 100, 588
HinP1I GCGC 3 cut(s) 94, 100, 588
HinfI GANTC 2 cut(s) 130, 289
HpaII CCGG 9 cut(s) 36, 233, 278, 396, 465, 510, 677, 686, 717
HphI GGTGA 3 cut(s) 199, 385, 439
Hpy166II GTNNAC 3 cut(s) 113, 356, 618
Hpy188I TCNGA 6 cut(s) 27, 79, 142, 604, 669, 747
Hpy188III TCNNGA 1 cut(s) 769
Hpy8I GTNNAC 3 cut(s) 113, 356, 618
Hpy99I CGWCG 4 cut(s) 59, 725, 728, 751
HpyAV CCTTC 3 cut(s) 370, 398, 691
HpyCH4III ACNGT 3 cut(s) 445, 451, 631
HpyCH4IV ACGT 2 cut(s) 269, 416
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 106, 192, 272, 489
HpyF3I CTNAG 2 cut(s) 141, 299
HpySE526I ACGT 2 cut(s) 269, 416
Hsp92II CATG 3 cut(s) 87, 175, 772
HspAI GCGC 3 cut(s) 94, 100, 588
KroI GCCGGC 1 cut(s) 35
KroNI GCCGGC 1 cut(s) 37
Kzo9I GATC 2 cut(s) 380, 664
LmnI GCTCC 5 cut(s) 72, 79, 107, 488, 688
Lsp1109I GCAGC 1 cut(s) 282
MabI ACCWGGT 1 cut(s) 566
MaeII ACGT 2 cut(s) 269, 416
MaeIII GTNAC 6 cut(s) 188, 302, 320, 391, 445, 592
MalI GATC 2 cut(s) 382, 666
MboI GATC 2 cut(s) 380, 664
MboII GAAGA 3 cut(s) 375, 700, 763
MflI RGATCY 1 cut(s) 380
MhlI GDGCHC 4 cut(s) 63, 314, 485, 740
MluCI AATT 2 cut(s) 703, 796
MlyI GAGTC 1 cut(s) 124
MmeI TCCRAC 3 cut(s) 50, 480, 770
MroNI GCCGGC 1 cut(s) 35
MroXI GAANNNNTTC 1 cut(s) 707
MseI TTAA 1 cut(s) 18
MspA1I CMGCKG 2 cut(s) 195, 295
MspI CCGG 9 cut(s) 36, 233, 278, 396, 465, 510, 677, 686, 717
MspR9I CCNGG 4 cut(s) 344, 515, 568, 686
MvaI CCWGG 3 cut(s) 344, 515, 568
MvnI CGCG 2 cut(s) 183, 654
MwoI GCNNNNNNNGC 5 cut(s) 11, 106, 192, 272, 489
NaeI GCCGGC 1 cut(s) 37
NciI CCSGG 1 cut(s) 686
NcoI CCATGG 1 cut(s) 83
NdeII GATC 2 cut(s) 380, 664
NgoMIV GCCGGC 1 cut(s) 35
NlaIII CATG 3 cut(s) 87, 175, 772
NlaIV GGNNCC 8 cut(s) 81, 202, 237, 409, 473, 539, 556, 690
NmuCI GTSAC 4 cut(s) 320, 391, 445, 592
PagI TCATGA 1 cut(s) 768
PdiI GCCGGC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 707
PfeI GAWTC 1 cut(s) 289
PflMI CCANNNNNTGG 2 cut(s) 349, 520
PfoI TCCNGGA 1 cut(s) 684
PkrI GCNGC 6 cut(s) 34, 185, 297, 401, 554, 577
PleI GAGTC 1 cut(s) 124
PpsI GAGTC 1 cut(s) 124
PpuMI RGGWCCY 3 cut(s) 200, 407, 471
PshAI GACNNNNGTC 1 cut(s) 134
Psp5II RGGWCCY 3 cut(s) 200, 407, 471
Psp6I CCWGG 3 cut(s) 342, 513, 566
PspGI CCWGG 3 cut(s) 342, 513, 566
PspN4I GGNNCC 8 cut(s) 81, 202, 237, 409, 473, 539, 556, 690
PspPI GGNCC 6 cut(s) 4, 87, 200, 407, 471, 570
PspPPI RGGWCCY 3 cut(s) 200, 407, 471
PstNI CAGNNNCTG 1 cut(s) 349
PsuI RGATCY 1 cut(s) 380
PvuII CAGCTG 1 cut(s) 295
RsaI GTAC 2 cut(s) 74, 341
RsaNI GTAC 2 cut(s) 73, 340
SaqAI TTAA 1 cut(s) 18
SatI GCNGC 6 cut(s) 33, 184, 296, 400, 553, 576
Sau3AI GATC 2 cut(s) 380, 664
Sau96I GGNCC 6 cut(s) 4, 87, 200, 407, 471, 570
ScaI AGTACT 1 cut(s) 74
SchI GAGTC 1 cut(s) 124
ScrFI CCNGG 4 cut(s) 344, 515, 568, 686
SduI GDGCHC 4 cut(s) 63, 314, 485, 740
SetI ASST 9 cut(s) 16, 69, 272, 297, 419, 473, 572, 602, 732
SexAI ACCWGGT 1 cut(s) 566
SgrAI CRCCGGYG 1 cut(s) 395
SinI GGWCC 5 cut(s) 87, 200, 407, 471, 570
SmlI CTYRAG 1 cut(s) 132
SmoI CTYRAG 1 cut(s) 132
Sse9I AATT 2 cut(s) 703, 796
StyD4I CCNGG 4 cut(s) 342, 513, 566, 684
StyI CCWWGG 3 cut(s) 40, 83, 282
TaaI ACNGT 3 cut(s) 445, 451, 631
TaiI ACGT 2 cut(s) 272, 419
TaqI TCGA 1 cut(s) 9
TasI AATT 2 cut(s) 703, 796
TatI WGTACW 1 cut(s) 72
TauI GCSGC 5 cut(s) 35, 186, 402, 555, 578
TfiI GAWTC 1 cut(s) 289
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
TseFI GTSAC 4 cut(s) 320, 391, 445, 592
TseI GCWGC 1 cut(s) 295
Tsp45I GTSAC 4 cut(s) 320, 391, 445, 592
TspDTI ATGAA 1 cut(s) 757
Van91I CCANNNNNTGG 2 cut(s) 349, 520
VpaK11BI GGWCC 5 cut(s) 87, 200, 407, 471, 570
XagI CCTNNNNNAGG 1 cut(s) 466
XapI RAATTY 1 cut(s) 703
XcmI CCANNNNNNNNNTGG 1 cut(s) 350
XmiI GTMKAC 1 cut(s) 617
XmnI GAANNNNTTC 1 cut(s) 707
ZrmI AGTACT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.