Rmu_co8483407.1_g000001

MRN-interacting protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8483407.1
Physical Location & Seq
Forward (+)
1 .. 850
850 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8483407.1_g000001.1.cds

Sequence Viewer

Length: 308 bp
atgtggagaactggaggtgcgagttgacaataaacaagaacacttcaaattggagccatctcatgatgcaagatgacaaggaatcaagaaaattgcatgcgacagaggcttcacttacaggtgcttcaaagtggaatgactacgtaaccgaggatgataatgatggattgagaatcatcaacagaaaaagccgtgaagagaatacagtgcaatggagtaatgaaacaatagcaaactatgagtatgagacagcaacaactgatgagagggtagaagatgacatccatcctgatttcttgcaaggctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

101

Amino Acids

11.87

Weight (kDa)

4.52

Isoelectric Point (pI)

26.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 47, 128
Alw26I GTCTC 1 cut(s) 241
BccI CCATC 3 cut(s) 65, 157, 293
BceAI ACGGC 1 cut(s) 176
BcoDI GTCTC 1 cut(s) 241
BmiI GGNNCC 1 cut(s) 55
BmsI GCATC 1 cut(s) 56
BpmI CTGGAG 1 cut(s) 33
BsaAI YACGTR 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 149
Bse1I ACTGG 1 cut(s) 16
Bse3DI GCAATG 1 cut(s) 217
BseDI CCNNGG 1 cut(s) 149
BseGI GGATG 3 cut(s) 159, 281, 285
BseMI GCAATG 1 cut(s) 217
BseNI ACTGG 1 cut(s) 16
BsmAI GTCTC 1 cut(s) 241
BspHI TCATGA 1 cut(s) 62
BspLI GGNNCC 1 cut(s) 55
BsrDI GCAATG 1 cut(s) 217
BsrI ACTGG 1 cut(s) 16
BssECI CCNNGG 1 cut(s) 149
Bst4CI ACNGT 1 cut(s) 207
Bst6I CTCTTC 1 cut(s) 191
BstBAI YACGTR 1 cut(s) 144
BstC8I GCNNGC 1 cut(s) 98
BstF5I GGATG 3 cut(s) 159, 281, 285
BstMAI GTCTC 1 cut(s) 241
BstMWI GCNNNNNNNGC 1 cut(s) 106
BstNSI RCATGY 1 cut(s) 100
BstSNI TACGTA 1 cut(s) 144
BtsCI GGATG 3 cut(s) 159, 281, 285
BtsIMutI CAGTG 1 cut(s) 212
Cac8I GCNNGC 1 cut(s) 98
CciI TCATGA 1 cut(s) 62
CviAII CATG 2 cut(s) 63, 97
CviJI RGCY 4 cut(s) 56, 109, 191, 305
CviKI_1 RGCY 4 cut(s) 56, 109, 191, 305
Eam1104I CTCTTC 1 cut(s) 191
EarI CTCTTC 1 cut(s) 191
Eco105I TACGTA 1 cut(s) 144
FaeI CATG 2 cut(s) 66, 100
FaiI YATR 4 cut(s) 64, 98, 239, 245
FatI CATG 2 cut(s) 62, 96
FokI GGATG 3 cut(s) 166, 268, 272
GsuI CTGGAG 1 cut(s) 33
Hin1II CATG 2 cut(s) 66, 100
HincII GTYRAC 1 cut(s) 26
HindII GTYRAC 1 cut(s) 26
HinfI GANTC 2 cut(s) 82, 173
Hpy166II GTNNAC 1 cut(s) 26
Hpy188III TCNNGA 3 cut(s) 63, 86, 289
Hpy8I GTNNAC 1 cut(s) 26
HpyCH4III ACNGT 1 cut(s) 207
HpyCH4IV ACGT 1 cut(s) 143
HpyCH4V TGCA 4 cut(s) 69, 96, 210, 300
HpyF10VI GCNNNNNNNGC 1 cut(s) 106
HpySE526I ACGT 1 cut(s) 143
Hsp92II CATG 2 cut(s) 66, 100
LmnI GCTCC 1 cut(s) 53
LpnPI CCDG 2 cut(s) 104, 302
LweI GCATC 1 cut(s) 56
MaeII ACGT 1 cut(s) 143
MaeIII GTNAC 1 cut(s) 144
MboII GAAGA 2 cut(s) 208, 286
MluCI AATT 2 cut(s) 48, 91
MnlI CCTC 4 cut(s) 8, 99, 144, 260
MwoI GCNNNNNNNGC 1 cut(s) 106
NlaIII CATG 2 cut(s) 66, 100
NlaIV GGNNCC 1 cut(s) 55
NspI RCATGY 1 cut(s) 100
PaeI GCATGC 1 cut(s) 100
PagI TCATGA 1 cut(s) 62
PfeI GAWTC 2 cut(s) 82, 173
Ppu21I YACGTR 1 cut(s) 144
PspN4I GGNNCC 1 cut(s) 55
SetI ASST 3 cut(s) 19, 123, 146
SfaNI GCATC 1 cut(s) 56
SnaBI TACGTA 1 cut(s) 144
SphI GCATGC 1 cut(s) 100
Sse9I AATT 2 cut(s) 48, 91
TaaI ACNGT 1 cut(s) 207
TaiI ACGT 1 cut(s) 146
TasI AATT 2 cut(s) 48, 91
TfiI GAWTC 2 cut(s) 82, 173
TscAI CASTG 1 cut(s) 212
TspDTI ATGAA 1 cut(s) 236
TspRI CASTG 1 cut(s) 212
XceI RCATGY 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.