Rmu_sc0001850.1_g000044

SUN domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001850.1
Physical Location & Seq
Reverse (-)
172952 .. 174347
1396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001850.1_g000044.1.cds

Sequence Viewer

Length: 1302 bp
atgagtcgaaatttcggcacctcggagaaagttgaatcgttgccgaaagagaaaagatatggaagattcaaaccttggggaagagaagatatggaagattcaaacacctcagcgcccatcgaactcgtctccgccgaaccgactgccgacgacgacccccgacccgaaaccgccgtcaaccgctcggcccagacccgtagaaccggcgccacttccaccgtctctcccccctccgctactcgcagctcccggaaagccctccccggaactaagcgacctcgctggctcaggttcgtttgtattttcggcaagtggttcggtcttcttgttttcgctggtggtttggcccagatactcatgcgcctcgcttacggttccacctccaccgccgccacgcccatggcgtttaccgacttggagggtcggattgcggaggtcgaagcgtcgatgaaggagacctctaggatgcttcaggttggggtggacgtggcgagccggaagatcgataaggaggtcggagaattgaggaaggaagtggaggacaggggggttgctttggccggtgaattgaggaaactggaggctaaaagtgaagggctggagaggtccgtggaggaattgaaaagcgtggagtggctgtcaaagcaagagtttgagaggatttaccaggacttgaagaaggaaggggagagtggtgagttgggtgcgagtttcgatgatataatggcgtatgccaggaatgtggttgagaaggagatagagaagcatgccgcggacgggcttgcgagggtggattatgcaatggggagtggcggtgctgcggttgtgaagcattcggagccttatgtggtggggaaagggaattggtggatgcgtatgaggaatgggattaagctcaggacagcaattattcctgaggctatcactttggaacatgtttcaaagagtgttgcttacgacagaacgagtgctcccaaggactgtcgtgtatctgcatggctgagaggagtgcatgatcaggagttagaagttcatacagagaagaggtttcttttggctgagttcacatatgacctcgagaagagcaatgcccagacagtcactgtgttggactcggctgtgtctaacattgttaacacagtgaggttggacttcacatccaatcatggtagcccttcacatacttgcatatatcgtctgcgagttcatggacatgaacccgaaactgtttctgtaatggccatgcaccagtcttatatcgtcttcgacttctcgggcatgaacctgacactgttactgtaa

Protein Analysis

433

Amino Acids

48.27

Weight (kDa)

6.59

Isoelectric Point (pI)

39.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 17, 206
AccBSI CCGCTC 1 cut(s) 183
AccII CGCG 1 cut(s) 773
AcoI YGGCCR 2 cut(s) 558, 1239
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 1 cut(s) 455
AcyI GRCGYC 1 cut(s) 207
AfiI CCNNNNNNNGG 1 cut(s) 777
AflIII ACRYGT 1 cut(s) 934
AgsI TTSAA 6 cut(s) 35, 70, 102, 622, 676, 942
AjiI CACGTC 1 cut(s) 487
AjnI CCWGG 2 cut(s) 666, 734
AloI GAACNNNNNNTCC 2 cut(s) 955, 987
AluBI AGCT 2 cut(s) 246, 895
AluI AGCT 2 cut(s) 246, 895
Alw21I GWGCWC 1 cut(s) 973
Alw26I GTCTC 3 cut(s) 133, 226, 449
AlwNI CAGNNNCTG 1 cut(s) 1103
Ama87I CYCGRG 2 cut(s) 1076, 1273
AoxI GGCC 4 cut(s) 186, 345, 558, 1239
ApeKI GCWGC 2 cut(s) 243, 818
ApoI RAATTY 1 cut(s) 10
ArsI GACNNNNNNTTYG 2 cut(s) 159, 191
AspLEI GCGC 3 cut(s) 115, 209, 363
AspS9I GGNCC 3 cut(s) 187, 346, 606
AsuC2I CCSGG 2 cut(s) 250, 264
AsuHPI GGTGA 2 cut(s) 575, 707
AvaI CYCGRG 2 cut(s) 1076, 1273
AvaII GGWCC 1 cut(s) 606
AxyI CCTNAGG 1 cut(s) 915
BalI TGGCCA 1 cut(s) 1241
BanI GGYRCC 2 cut(s) 17, 206
BbsI GAAGAC 2 cut(s) 314, 1255
Bbv12I GWGCWC 1 cut(s) 973
BbvCI CCTCAGC 1 cut(s) 109
BbvI GCAGC 2 cut(s) 255, 805
BccI CCATC 1 cut(s) 125
BceAI ACGGC 1 cut(s) 158
BcgI CGANNNNNNTGC 4 cut(s) 125, 159, 298, 332
BciT130I CCWGG 2 cut(s) 668, 736
BclI TGATCA 1 cut(s) 1015
BcnI CCSGG 2 cut(s) 250, 264
BcoDI GTCTC 3 cut(s) 133, 226, 449
BfaI CTAG 1 cut(s) 462
BfoI RGCGCY 2 cut(s) 116, 210
BisI GCNGC 4 cut(s) 244, 390, 771, 819
BlsI GCNGC 4 cut(s) 245, 391, 772, 820
Bme1390I CCNGG 4 cut(s) 250, 264, 668, 736
Bme18I GGWCC 1 cut(s) 606
BmeT110I CYCGRG 2 cut(s) 1076, 1273
BmgBI CACGTC 1 cut(s) 487
BmgT120I GGNCC 3 cut(s) 187, 346, 606
BmiI GGNNCC 4 cut(s) 19, 208, 376, 840
BmrFI CCNGG 4 cut(s) 250, 264, 668, 736
BmsI GCATC 2 cut(s) 456, 861
BpiI GAAGAC 2 cut(s) 314, 1255
BpmI CTGGAG 2 cut(s) 599, 620
Bpu10I CCTNAGC 3 cut(s) 109, 287, 896
BpuMI CCSGG 2 cut(s) 250, 264
Bsa29I ATCGAT 1 cut(s) 504
BsaHI GRCGYC 1 cut(s) 207
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 7 cut(s) 21, 74, 262, 399, 609, 771, 975
BsaXI ACNNNNNCTCC 8 cut(s) 208, 238, 623, 653, 799, 829, 955, 985
Bsc4I CCNNNNNNNGG 1 cut(s) 777
Bse118I RCCGGY 2 cut(s) 203, 560
Bse1I ACTGG 2 cut(s) 582, 1249
Bse21I CCTNAGG 1 cut(s) 915
Bse3DI GCAATG 2 cut(s) 807, 1093
BseBI CCWGG 2 cut(s) 668, 736
BseCI ATCGAT 1 cut(s) 504
BseDI CCNNGG 7 cut(s) 21, 74, 262, 399, 609, 771, 975
BseGI GGATG 3 cut(s) 471, 876, 1157
BseLI CCNNNNNNNGG 1 cut(s) 777
BseMI GCAATG 2 cut(s) 807, 1093
BseMII CTCAG 6 cut(s) 123, 301, 906, 910, 992, 1050
BseNI ACTGG 2 cut(s) 582, 1249
BseRI GAGGAG 1 cut(s) 1020
BseXI GCAGC 2 cut(s) 255, 805
Bsh1236I CGCG 1 cut(s) 773
BshFI GGCC 4 cut(s) 188, 347, 560, 1241
BshNI GGYRCC 2 cut(s) 17, 206
BshVI ATCGAT 1 cut(s) 504
BsiHKAI GWGCWC 1 cut(s) 973
BsiHKCI CYCGRG 2 cut(s) 1076, 1273
BsiSI CCGG 5 cut(s) 204, 250, 264, 496, 561
BslI CCNNNNNNNGG 1 cut(s) 777
BsmAI GTCTC 3 cut(s) 133, 226, 449
BsmBI CGTCTC 2 cut(s) 133, 226
BsmI GAATGC 1 cut(s) 832
BsnI GGCC 4 cut(s) 188, 347, 560, 1241
Bso31I GGTCTC 1 cut(s) 449
BsoBI CYCGRG 2 cut(s) 1076, 1273
Bsp1286I GDGCHC 1 cut(s) 973
Bsp143I GATC 2 cut(s) 501, 1015
Bsp19I CCATGG 1 cut(s) 399
BspANI GGCC 4 cut(s) 188, 347, 560, 1241
BspCNI CTCAG 6 cut(s) 122, 300, 907, 909, 993, 1051
BspDI ATCGAT 1 cut(s) 504
BspFNI CGCG 1 cut(s) 773
BspLI GGNNCC 4 cut(s) 19, 208, 376, 840
BspQI GCTCTTC 1 cut(s) 1076
BspT107I GGYRCC 2 cut(s) 17, 206
BspTNI GGTCTC 1 cut(s) 449
BsrBI CCGCTC 1 cut(s) 183
BsrDI GCAATG 2 cut(s) 807, 1093
BsrFI RCCGGY 2 cut(s) 203, 560
BsrI ACTGG 2 cut(s) 582, 1249
BssAI RCCGGY 2 cut(s) 203, 560
BssECI CCNNGG 7 cut(s) 21, 74, 262, 399, 609, 771, 975
BssMI GATC 2 cut(s) 501, 1015
BssNI GRCGYC 1 cut(s) 207
BssT1I CCWWGG 3 cut(s) 74, 399, 975
Bst2UI CCWGG 2 cut(s) 668, 736
Bst4CI ACNGT 9 cut(s) 220, 374, 983, 1099, 1105, 1141, 1228, 1293, 1299
Bst6I CTCTTC 3 cut(s) 76, 1037, 1076
BstACI GRCGYC 1 cut(s) 207
BstC8I GCNNGC 4 cut(s) 284, 493, 768, 783
BstDEI CTNAG 7 cut(s) 109, 270, 287, 896, 915, 1001, 1059
BstDSI CCRYGG 3 cut(s) 399, 609, 771
BstF5I GGATG 3 cut(s) 471, 876, 1157
BstFNI CGCG 1 cut(s) 773
BstH2I RGCGCY 2 cut(s) 116, 210
BstHHI GCGC 3 cut(s) 115, 209, 363
BstKTI GATC 2 cut(s) 504, 1018
BstMAI GTCTC 3 cut(s) 133, 226, 449
BstMBI GATC 2 cut(s) 501, 1015
BstMWI GCNNNNNNNGC 2 cut(s) 643, 838
BstNI CCWGG 2 cut(s) 668, 736
BstNSI RCATGY 2 cut(s) 770, 938
BstSCI CCNGG 4 cut(s) 248, 262, 666, 734
BstUI CGCG 1 cut(s) 773
BstV1I GCAGC 2 cut(s) 255, 805
BstV2I GAAGAC 2 cut(s) 314, 1255
BstXI CCANNNNNNTGG 2 cut(s) 400, 742
Bsu15I ATCGAT 1 cut(s) 504
Bsu36I CCTNAGG 1 cut(s) 915
BsuRI GGCC 4 cut(s) 188, 347, 560, 1241
BsuTUI ATCGAT 1 cut(s) 504
BtgI CCRYGG 3 cut(s) 399, 609, 771
BtrI CACGTC 1 cut(s) 487
BtsCI GGATG 3 cut(s) 471, 876, 1157
BtsIMutI CAGTG 3 cut(s) 1101, 1146, 1289
Cac8I GCNNGC 4 cut(s) 284, 493, 768, 783
CaiI CAGNNNCTG 1 cut(s) 1103
CfoI GCGC 3 cut(s) 115, 209, 363
Cfr10I RCCGGY 2 cut(s) 203, 560
Cfr13I GGNCC 3 cut(s) 187, 346, 606
Cfr42I CCGCGG 1 cut(s) 774
ClaI ATCGAT 1 cut(s) 504
CseI GACGC 1 cut(s) 432
DdeI CTNAG 7 cut(s) 109, 270, 287, 896, 915, 1001, 1059
DinI GGCGCC 1 cut(s) 208
DpnI GATC 2 cut(s) 503, 1017
DpnII GATC 2 cut(s) 501, 1015
EaeI YGGCCR 2 cut(s) 558, 1239
Eam1104I CTCTTC 3 cut(s) 76, 1037, 1076
EarI CTCTTC 3 cut(s) 76, 1037, 1076
EciI GGCGGA 1 cut(s) 121
Eco130I CCWWGG 3 cut(s) 74, 399, 975
Eco31I GGTCTC 1 cut(s) 449
Eco47I GGWCC 1 cut(s) 606
Eco57I CTGAAG 1 cut(s) 455
Eco81I CCTNAGG 1 cut(s) 915
Eco88I CYCGRG 2 cut(s) 1076, 1273
EcoRII CCWGG 2 cut(s) 666, 734
EcoT14I CCWWGG 3 cut(s) 74, 399, 975
EgeI GGCGCC 1 cut(s) 208
EheI GGCGCC 1 cut(s) 208
ErhI CCWWGG 3 cut(s) 74, 399, 975
Esp3I CGTCTC 2 cut(s) 133, 226
FauNDI CATATG 1 cut(s) 1069
FbaI TGATCA 1 cut(s) 1015
Fnu4HI GCNGC 4 cut(s) 244, 390, 771, 819
FokI GGATG 3 cut(s) 478, 883, 1144
Fsp4HI GCNGC 4 cut(s) 244, 390, 771, 819
FspBI CTAG 1 cut(s) 462
GlaI GCGC 3 cut(s) 114, 208, 362
GluI GCNGC 4 cut(s) 244, 390, 771, 819
GsuI CTGGAG 2 cut(s) 599, 620
HaeII RGCGCY 2 cut(s) 116, 210
HaeIII GGCC 4 cut(s) 188, 347, 560, 1241
HapII CCGG 5 cut(s) 204, 250, 264, 496, 561
HgaI GACGC 1 cut(s) 432
HhaI GCGC 3 cut(s) 115, 209, 363
Hin1I GRCGYC 1 cut(s) 207
Hin6I GCGC 3 cut(s) 113, 207, 361
HinP1I GCGC 3 cut(s) 113, 207, 361
HincII GTYRAC 2 cut(s) 178, 1135
HindII GTYRAC 2 cut(s) 178, 1135
HinfI GANTC 5 cut(s) 4, 35, 66, 98, 1112
HpaI GTTAAC 1 cut(s) 1135
HpaII CCGG 5 cut(s) 204, 250, 264, 496, 561
HphI GGTGA 2 cut(s) 575, 707
Hpy166II GTNNAC 5 cut(s) 178, 408, 484, 1065, 1135
Hpy188I TCNGA 4 cut(s) 25, 426, 518, 838
Hpy188III TCNNGA 4 cut(s) 898, 914, 1019, 1078
Hpy8I GTNNAC 5 cut(s) 178, 408, 484, 1065, 1135
Hpy99I CGWCG 3 cut(s) 152, 155, 448
HpyAV CCTTC 7 cut(s) 445, 523, 587, 673, 677, 745, 1185
HpyCH4III ACNGT 9 cut(s) 220, 374, 983, 1099, 1105, 1141, 1228, 1293, 1299
HpyCH4IV ACGT 1 cut(s) 486
HpyCH4V TGCA 5 cut(s) 800, 995, 1012, 1188, 1246
HpyF10VI GCNNNNNNNGC 2 cut(s) 643, 838
HpyF3I CTNAG 7 cut(s) 109, 270, 287, 896, 915, 1001, 1059
HpySE526I ACGT 1 cut(s) 486
Hsp92I GRCGYC 1 cut(s) 207
HspAI GCGC 3 cut(s) 113, 207, 361
KasI GGCGCC 1 cut(s) 206
Ksp22I TGATCA 1 cut(s) 1015
KspAI GTTAAC 1 cut(s) 1135
KspI CCGCGG 1 cut(s) 774
Kzo9I GATC 2 cut(s) 501, 1015
LguI GCTCTTC 1 cut(s) 1076
LmnI GCTCC 3 cut(s) 251, 838, 976
Lsp1109I GCAGC 2 cut(s) 255, 805
LweI GCATC 2 cut(s) 456, 861
MaeI CTAG 1 cut(s) 462
MaeII ACGT 1 cut(s) 486
MaeIII GTNAC 2 cut(s) 1099, 1293
MalI GATC 2 cut(s) 503, 1017
MbiI CCGCTC 1 cut(s) 183
MboI GATC 2 cut(s) 501, 1015
MhlI GDGCHC 1 cut(s) 973
MlsI TGGCCA 1 cut(s) 1241
MluCI AATT 6 cut(s) 10, 521, 566, 617, 862, 906
MluNI TGGCCA 1 cut(s) 1241
Mly113I GGCGCC 1 cut(s) 207
MlyI GAGTC 2 cut(s) 13, 1106
MmeI TCCRAC 4 cut(s) 404, 496, 1089, 1128
Mox20I TGGCCA 1 cut(s) 1241
MscI TGGCCA 1 cut(s) 1241
MseI TTAA 2 cut(s) 891, 1134
MslI CAYNNNNRTG 2 cut(s) 398, 1212
Msp20I TGGCCA 1 cut(s) 1241
MspA1I CMGCKG 1 cut(s) 773
MspI CCGG 5 cut(s) 204, 250, 264, 496, 561
MspR9I CCNGG 4 cut(s) 250, 264, 668, 736
Mva1269I GAATGC 1 cut(s) 832
MvaI CCWGG 2 cut(s) 668, 736
MvnI CGCG 1 cut(s) 773
MwoI GCNNNNNNNGC 2 cut(s) 643, 838
NarI GGCGCC 1 cut(s) 207
NciI CCSGG 2 cut(s) 250, 264
NcoI CCATGG 1 cut(s) 399
NdeI CATATG 1 cut(s) 1069
NdeII GATC 2 cut(s) 501, 1015
NlaIV GGNNCC 4 cut(s) 19, 208, 376, 840
NmeAIII GCCGAG 2 cut(s) 164, 1094
NmuCI GTSAC 1 cut(s) 1099
NspI RCATGY 2 cut(s) 770, 938
PaeI GCATGC 1 cut(s) 770
PaeR7I CTCGAG 1 cut(s) 1076
PciI ACATGT 1 cut(s) 934
PciSI GCTCTTC 1 cut(s) 1076
PcsI WCGNNNNNNNCGW 2 cut(s) 132, 401
PctI GAATGC 1 cut(s) 832
PfeI GAWTC 3 cut(s) 35, 66, 98
PfoI TCCNGGA 1 cut(s) 248
PkrI GCNGC 4 cut(s) 245, 391, 772, 820
PleI GAGTC 2 cut(s) 12, 1106
PluTI GGCGCC 1 cut(s) 210
PpsI GAGTC 2 cut(s) 12, 1106
PscI ACATGT 1 cut(s) 934
Psp6I CCWGG 2 cut(s) 666, 734
PspGI CCWGG 2 cut(s) 666, 734
PspN4I GGNNCC 4 cut(s) 19, 208, 376, 840
PspPI GGNCC 3 cut(s) 187, 346, 606
PstNI CAGNNNCTG 1 cut(s) 1103
RseI CAYNNNNRTG 2 cut(s) 398, 1212
SacII CCGCGG 1 cut(s) 774
SapI GCTCTTC 1 cut(s) 1076
SaqAI TTAA 2 cut(s) 891, 1134
SatI GCNGC 4 cut(s) 244, 390, 771, 819
Sau3AI GATC 2 cut(s) 501, 1015
Sau96I GGNCC 3 cut(s) 187, 346, 606
SchI GAGTC 2 cut(s) 13, 1106
ScrFI CCNGG 4 cut(s) 250, 264, 668, 736
SduI GDGCHC 1 cut(s) 973
SfaNI GCATC 2 cut(s) 456, 861
SfoI GGCGCC 1 cut(s) 208
Sfr274I CTCGAG 1 cut(s) 1076
Sfr303I CCGCGG 1 cut(s) 774
SgrBI CCGCGG 1 cut(s) 774
SinI GGWCC 1 cut(s) 606
SlaI CTCGAG 1 cut(s) 1076
SmiMI CAYNNNNRTG 2 cut(s) 398, 1212
SmlI CTYRAG 1 cut(s) 1076
SmoI CTYRAG 1 cut(s) 1076
SphI GCATGC 1 cut(s) 770
Sse9I AATT 6 cut(s) 10, 521, 566, 617, 862, 906
SspDI GGCGCC 1 cut(s) 206
SspMI CTAG 1 cut(s) 462
StyD4I CCNGG 4 cut(s) 248, 262, 666, 734
StyI CCWWGG 3 cut(s) 74, 399, 975
TaaI ACNGT 9 cut(s) 220, 374, 983, 1099, 1105, 1141, 1228, 1293, 1299
TaiI ACGT 1 cut(s) 489
TaqI TCGA 8 cut(s) 7, 120, 438, 446, 504, 714, 1077, 1266
TaqII GACCGA 1 cut(s) 308
TasI AATT 6 cut(s) 10, 521, 566, 617, 862, 906
TauI GCSGC 2 cut(s) 392, 773
TfiI GAWTC 3 cut(s) 35, 66, 98
Tru1I TTAA 2 cut(s) 891, 1134
Tru9I TTAA 2 cut(s) 891, 1134
TscAI CASTG 3 cut(s) 1108, 1146, 1296
TseFI GTSAC 1 cut(s) 1099
TseI GCWGC 2 cut(s) 243, 818
Tsp45I GTSAC 1 cut(s) 1099
TspDTI ATGAA 5 cut(s) 464, 1022, 1196, 1230, 1295
TspGWI ACGGA 1 cut(s) 598
TspRI CASTG 3 cut(s) 1108, 1146, 1296
VpaK11BI GGWCC 1 cut(s) 606
XapI RAATTY 1 cut(s) 10
XceI RCATGY 2 cut(s) 770, 938
XhoI CTCGAG 1 cut(s) 1076
XspI CTAG 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.