Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0004340

Physical Location & Seq

Genomic Coordinates Forward (+)

13589963 .. 13593801

Gene Structure 3839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG086100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGTCGGCATCGACTGTATCTATCACGGCGAACCCGACGACCCGGCGGCGACCCATCGTGGCCGTCGAGAAGAGGTCCACCCACATCGAACTCGTCTCCGCCGAACCCCAATCGCAGAGGGCCGACGGCGACCCCCGACCCGAAACCGCCAGAGATCTGAGTCACCAGTCCATCAGAAGCGAAACCGCCGTCGACCGCTCCGCTCAGACCCGAAGAACCGGCGCCACTTCCACCGTCTCACCCCCCTCCGCCCACCGCCGCTCTCGCAAAGCGCTGCCCGGAACCAAGCGACCTCGCTGGCTCAGGTTCCTTCGTATTTTCGGCAAGTGGTTTGGTCTTCTTGTTTTCGTCGGCGGTTTGGCCCAGATACTCATGCGCCTCGCTTACGGCTCCACCGCCGCCGCGCCCATGGCGTTTACCGACTTGGAGGGTCGGATTGCGGAGGTCGAAGCGTCGATGAAGGAGACTTCTAGGATGCTTCAGGTTGGGGTGGACATGGCGAGCCGGAAGATCGATAAGGAGGTTGGAGAGTTGAGGAAGGAGGTGGAGGACAGAGAGGTTGCTTTGGCCGGGGAATTGAGGAAATTGGAGGCGAAAAGCGAAGGGCTGGAGAGGTCTGTGGAGGAATTGAAGAGCGTGGAGTGGCTGTCCAAGCAAGAGTTTGAGGGGATTTACCAGGAGTTGAAGAAGGAAGGGAAGAGTGGTGAGTTGGGTGCGAGTTTCGATGATATAATGGCGTATGCGAGGAATGTGGTGGAGAAGGAGATAGAGAAGCATGCTGCGGATGGGCTTGCGAGGGTGGATTATGCATTGGGGAGTGGAGGTGCTGCGGTTGTGAAGCATTCGGAGCCGTATGTGGTGGGGAAAGGGAATTGGTGGACGAGTATGAGGAATGGGGTTCATAGTGATGCTGAGAAGATGTTGAGACCGAGTTTTGGAGAGCCCGGGCAGTGTTTTCCGTTGAAAGGGAGTAGTGGGTTTGTTCAGATTAAGCTCAGGACAGCAATTATTCCCGAGGCTATCACTCTGGAGCATGTTTCAAAGAGTGTTGCTTACGACAGAACGAGTGCTCCCAAGGACTGTCGTATATCTGCATGGCTGCGAGGAGTGCATGATCAGGATTTAGAAGTCCATACAGAGAAGAGGTTTCTTTTGGCTGAGTTCACATATGACCTCGAGAAGAGCAATGCCCAGACAGTCACTGTGTTGGACTCAGCTGTGTCTAACATTGTTGACACAGTGAGGTTGGACTTCACATCCAATCATGGTAGCCCTTCACATACTTGCATATATCGTCTGCGAGTTCATGGACATGAACCCGAAGCTGTTTCTGTAATGGCCATGCACCTGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005789 GO:0005819 GO:0005856 GO:0006996 GO:0006997 GO:0007049 GO:0007059 GO:0007127 GO:0008104 GO:0008150 GO:0008360 GO:0009524 GO:0009987 GO:0012505 GO:0015630 GO:0016020 GO:0016043 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0031967 GO:0031975 GO:0031984 GO:0032878 GO:0033036 GO:0033365 GO:0034397 GO:0034398 GO:0034504 GO:0034613 GO:0042175 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043495 GO:0043621 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044430 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044821 GO:0045132 GO:0045141 GO:0045143 GO:0048285 GO:0050000 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051276 GO:0051291 GO:0051303 GO:0051321 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061982 GO:0065003 GO:0065007 GO:0065008 GO:0070192 GO:0070197 GO:0070727 GO:0071840 GO:0090220 GO:0090435 GO:0097240 GO:0098813 GO:0098827 GO:0140013 GO:1903046 GO:2000769

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sad1_UNC

Protein Analysis

451

Amino Acids

49.94

Weight (kDa)

8.57

Isoelectric Point (pI)

47.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sad1_UNC	PF07738	303 - 438	2.9e-35	Sad1 / UNC-like C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004340)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10730 AT5G04990
fragaria_vesca	FvH4_7g04870
malus_domestica	MD02G1266700.v1.1 MD07G1053000.v1.1
prunus_persica	Prupe.2G056900_v2.0.a1
pyrus_communis	pycom02g22820 pycom07g04100
rosa_chinensis	RchiOBHm_Chr1g0324281 RchiOBHm_Chr1g0330551
rosa_laevigata	RLG00000029806 RLG00000030209
rosa_multiflora	Rmu_co8045364.1_g000001 Rmu_co8316659.1_g000001 Rmu_co8464795.1_g000001 Rmu_sc0001850.1_g000044 Rmu_sc0002365.1_g000026 Rmu_sc0007290.1_g000001 Rmu_sc0037448.1_g000001
rosa_roxburghii	Rroxscaffold_159G00432660 Rroxscaffold_4G00319920
rosa_rugosa	Rorug01G0089200 Rorug02G0533700
rosa_samantha	Rh1AG060500 Rh1AG107300 Rh1BG086100 Rh1CG103200 Rh1DG067200 Rh1DG112900
rosa_wichuraiana	Rw1G005160 Rw1G008530 Rw1G008910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	221
AccBSI	CCGCTC	3 cut(s)	198, 203, 261
AccI	GTMKAC	1 cut(s)	192
AccII	CGCG	1 cut(s)	404
AcoI	YGGCCR	3 cut(s)	60, 567, 1338
AcuI	CTGAAG	1 cut(s)	464
AcyI	GRCGYC	1 cut(s)	222
AfeI	AGCGCT	1 cut(s)	273
AfiI	CCNNNNNNNGG	2 cut(s)	935, 965
AgsI	TTSAA	4 cut(s)	631, 685, 964, 1041
AjnI	CCWGG	1 cut(s)	675
AloI	GAACNNNNNNTCC	2 cut(s)	1054, 1086
AluBI	AGCT	3 cut(s)	994, 1217, 1325
AluI	AGCT	3 cut(s)	994, 1217, 1325
Alw21I	GWGCWC	1 cut(s)	1072
Alw26I	GTCTC	4 cut(s)	100, 241, 458, 919
AlwNI	CAGNNNCTG	1 cut(s)	1202
Ama87I	CYCGRG	3 cut(s)	944, 1013, 1175
Aor51HI	AGCGCT	1 cut(s)	273
AoxI	GGCC	5 cut(s)	60, 120, 360, 567, 1338
ApeKI	GCWGC	4 cut(s)	274, 779, 827, 1099
ArsI	GACNNNNNNTTYG	2 cut(s)	174, 206
AspLEI	GCGC	4 cut(s)	224, 274, 378, 406
AspS9I	GGNCC	3 cut(s)	75, 120, 361
AsuC2I	CCSGG	5 cut(s)	43, 279, 571, 945, 946
AsuHPI	GGTGA	3 cut(s)	155, 231, 716
AvaI	CYCGRG	3 cut(s)	944, 1013, 1175
AvaII	GGWCC	1 cut(s)	75
BalI	TGGCCA	1 cut(s)	1340
BanI	GGYRCC	1 cut(s)	221
BanII	GRGCYC	1 cut(s)	945
BbsI	GAAGAC	1 cut(s)	329
Bbv12I	GWGCWC	1 cut(s)	1072
BbvI	GCAGC	4 cut(s)	261, 766, 814, 1086
BccI	CCATC	3 cut(s)	62, 179, 779
BceAI	ACGGC	6 cut(s)	42, 47, 142, 173, 403, 835
BciT130I	CCWGG	1 cut(s)	677
BclI	TGATCA	1 cut(s)	1114
BcnI	CCSGG	5 cut(s)	43, 279, 571, 945, 946
BcoDI	GTCTC	4 cut(s)	100, 241, 458, 919
BfaI	CTAG	1 cut(s)	471
BfoI	RGCGCY	2 cut(s)	225, 275
BglII	AGATCT	1 cut(s)	154
BisI	GCNGC	8 cut(s)	47, 259, 275, 399, 402, 780, 828, 1100
BlsI	GCNGC	8 cut(s)	48, 260, 276, 400, 403, 781, 829, 1101
Bme1390I	CCNGG	6 cut(s)	43, 279, 571, 677, 945, 946
Bme18I	GGWCC	1 cut(s)	75
BmeT110I	CYCGRG	3 cut(s)	944, 1013, 1175
BmgT120I	GGNCC	3 cut(s)	75, 120, 361
BmiI	GGNNCC	5 cut(s)	223, 283, 308, 391, 849
BmrFI	CCNGG	6 cut(s)	43, 279, 571, 677, 945, 946
BmsI	GCATC	3 cut(s)	17, 465, 898
BpiI	GAAGAC	1 cut(s)	329
BpmI	CTGGAG	2 cut(s)	629, 1049
Bpu10I	CCTNAGC	2 cut(s)	302, 995
BpuMI	CCSGG	5 cut(s)	43, 279, 571, 945, 946
Bsa29I	ATCGAT	1 cut(s)	513
BsaHI	GRCGYC	1 cut(s)	222
BsaI	GGTCTC	1 cut(s)	919
BsaJI	CCNNGG	5 cut(s)	408, 570, 944, 1014, 1074
BsaXI	ACNNNNNCTCC	6 cut(s)	632, 662, 808, 838, 1054, 1084
Bsc4I	CCNNNNNNNGG	2 cut(s)	935, 965
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	1 cut(s)	166
Bse3DI	GCAATG	1 cut(s)	1192
BseBI	CCWGG	1 cut(s)	677
BseCI	ATCGAT	1 cut(s)	513
BseDI	CCNNGG	5 cut(s)	408, 570, 944, 1014, 1074
BseGI	GGATG	3 cut(s)	480, 790, 1256
BseLI	CCNNNNNNNGG	2 cut(s)	935, 965
BseMI	GCAATG	1 cut(s)	1192
BseMII	CTCAG	7 cut(s)	149, 218, 316, 903, 1009, 1149, 1227
BseNI	ACTGG	1 cut(s)	166
BseRI	GAGGAG	1 cut(s)	1119
BseXI	GCAGC	4 cut(s)	261, 766, 814, 1086
Bsh1236I	CGCG	1 cut(s)	404
Bsh1285I	CGRYCG	1 cut(s)	196
BshFI	GGCC	5 cut(s)	62, 122, 362, 569, 1340
BshNI	GGYRCC	1 cut(s)	221
BshVI	ATCGAT	1 cut(s)	513
BsiEI	CGRYCG	1 cut(s)	196
BsiHKAI	GWGCWC	1 cut(s)	1072
BsiHKCI	CYCGRG	3 cut(s)	944, 1013, 1175
BsiSI	CCGG	6 cut(s)	43, 219, 279, 505, 570, 945
BslI	CCNNNNNNNGG	2 cut(s)	935, 965
BsmAI	GTCTC	4 cut(s)	100, 241, 458, 919
BsmBI	CGTCTC	2 cut(s)	100, 241
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	5 cut(s)	62, 122, 362, 569, 1340
Bso31I	GGTCTC	1 cut(s)	919
BsoBI	CYCGRG	3 cut(s)	944, 1013, 1175
Bsp1286I	GDGCHC	2 cut(s)	945, 1072
Bsp143I	GATC	3 cut(s)	154, 510, 1114
Bsp19I	CCATGG	1 cut(s)	408
BspANI	GGCC	5 cut(s)	62, 122, 362, 569, 1340
BspCNI	CTCAG	7 cut(s)	150, 217, 315, 904, 1008, 1150, 1226
BspDI	ATCGAT	1 cut(s)	513
BspFNI	CGCG	1 cut(s)	404
BspLI	GGNNCC	5 cut(s)	223, 283, 308, 391, 849
BspQI	GCTCTTC	2 cut(s)	626, 1175
BspT107I	GGYRCC	1 cut(s)	221
BspTNI	GGTCTC	1 cut(s)	919
BsrBI	CCGCTC	3 cut(s)	198, 203, 261
BsrDI	GCAATG	1 cut(s)	1192
BsrFI	RCCGGY	1 cut(s)	218
BsrI	ACTGG	1 cut(s)	166
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	5 cut(s)	408, 570, 944, 1014, 1074
BssMI	GATC	3 cut(s)	154, 510, 1114
BssNI	GRCGYC	1 cut(s)	222
BssT1I	CCWWGG	2 cut(s)	408, 1074
Bst2UI	CCWGG	1 cut(s)	677
Bst4CI	ACNGT	6 cut(s)	16, 235, 1082, 1198, 1204, 1240
Bst6I	CTCTTC	5 cut(s)	65, 626, 692, 1136, 1175
BstACI	GRCGYC	1 cut(s)	222
BstC8I	GCNNGC	4 cut(s)	299, 502, 777, 792
BstDEI	CTNAG	7 cut(s)	158, 204, 302, 912, 995, 1158, 1213
BstDSI	CCRYGG	1 cut(s)	408
BstF5I	GGATG	3 cut(s)	480, 790, 1256
BstFNI	CGCG	1 cut(s)	404
BstH2I	RGCGCY	2 cut(s)	225, 275
BstHHI	GCGC	4 cut(s)	224, 274, 378, 406
BstKTI	GATC	3 cut(s)	157, 513, 1117
BstMAI	GTCTC	4 cut(s)	100, 241, 458, 919
BstMBI	GATC	3 cut(s)	154, 510, 1114
BstMCI	CGRYCG	1 cut(s)	196
BstMWI	GCNNNNNNNGC	5 cut(s)	264, 410, 652, 847, 1108
BstNI	CCWGG	1 cut(s)	677
BstNSI	RCATGY	2 cut(s)	779, 1037
BstSCI	CCNGG	6 cut(s)	41, 277, 569, 675, 943, 944
BstUI	CGCG	1 cut(s)	404
BstV1I	GCAGC	4 cut(s)	261, 766, 814, 1086
BstV2I	GAAGAC	1 cut(s)	329
BstX2I	RGATCY	1 cut(s)	154
BstYI	RGATCY	1 cut(s)	154
Bsu15I	ATCGAT	1 cut(s)	513
BsuRI	GGCC	5 cut(s)	62, 122, 362, 569, 1340
BsuTUI	ATCGAT	1 cut(s)	513
BtgI	CCRYGG	1 cut(s)	408
BtsCI	GGATG	3 cut(s)	480, 790, 1256
BtsI	GCAGTG	1 cut(s)	956
BtsIMutI	CAGTG	3 cut(s)	956, 1200, 1245
Cac8I	GCNNGC	4 cut(s)	299, 502, 777, 792
CaiI	CAGNNNCTG	1 cut(s)	1202
CfoI	GCGC	4 cut(s)	224, 274, 378, 406
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	3 cut(s)	75, 120, 361
Cfr9I	CCCGGG	1 cut(s)	944
ClaI	ATCGAT	1 cut(s)	513
CseI	GACGC	1 cut(s)	441
DdeI	CTNAG	7 cut(s)	158, 204, 302, 912, 995, 1158, 1213
DinI	GGCGCC	1 cut(s)	223
DpnI	GATC	3 cut(s)	156, 512, 1116
DpnII	GATC	3 cut(s)	154, 510, 1114
EaeI	YGGCCR	3 cut(s)	60, 567, 1338
Eam1104I	CTCTTC	5 cut(s)	65, 626, 692, 1136, 1175
EarI	CTCTTC	5 cut(s)	65, 626, 692, 1136, 1175
EciI	GGCGGA	2 cut(s)	88, 238
Eco130I	CCWWGG	2 cut(s)	408, 1074
Eco24I	GRGCYC	1 cut(s)	945
Eco31I	GGTCTC	1 cut(s)	919
Eco47I	GGWCC	1 cut(s)	75
Eco47III	AGCGCT	1 cut(s)	273
Eco57I	CTGAAG	1 cut(s)	464
Eco88I	CYCGRG	3 cut(s)	944, 1013, 1175
EcoRII	CCWGG	1 cut(s)	675
EcoT14I	CCWWGG	2 cut(s)	408, 1074
EcoT22I	ATGCAT	1 cut(s)	811
EcoT38I	GRGCYC	1 cut(s)	945
EgeI	GGCGCC	1 cut(s)	223
EheI	GGCGCC	1 cut(s)	223
ErhI	CCWWGG	2 cut(s)	408, 1074
Esp3I	CGTCTC	2 cut(s)	100, 241
FauNDI	CATATG	1 cut(s)	1168
FbaI	TGATCA	1 cut(s)	1114
FblI	GTMKAC	1 cut(s)	192
Fnu4HI	GCNGC	8 cut(s)	47, 259, 275, 399, 402, 780, 828, 1100
FokI	GGATG	3 cut(s)	487, 797, 1243
FriOI	GRGCYC	1 cut(s)	945
Fsp4HI	GCNGC	8 cut(s)	47, 259, 275, 399, 402, 780, 828, 1100
FspBI	CTAG	1 cut(s)	471
GlaI	GCGC	4 cut(s)	223, 273, 377, 405
GluI	GCNGC	8 cut(s)	47, 259, 275, 399, 402, 780, 828, 1100
GsuI	CTGGAG	2 cut(s)	629, 1049
HaeII	RGCGCY	2 cut(s)	225, 275
HaeIII	GGCC	5 cut(s)	62, 122, 362, 569, 1340
HapII	CCGG	6 cut(s)	43, 219, 279, 505, 570, 945
HgaI	GACGC	1 cut(s)	441
HhaI	GCGC	4 cut(s)	224, 274, 378, 406
Hin1I	GRCGYC	1 cut(s)	222
Hin6I	GCGC	4 cut(s)	222, 272, 376, 404
HinP1I	GCGC	4 cut(s)	222, 272, 376, 404
HincII	GTYRAC	2 cut(s)	193, 1234
HindII	GTYRAC	2 cut(s)	193, 1234
HinfI	GANTC	2 cut(s)	160, 1211
HpaII	CCGG	6 cut(s)	43, 219, 279, 505, 570, 945
HphI	GGTGA	3 cut(s)	155, 231, 716
Hpy166II	GTNNAC	7 cut(s)	78, 193, 417, 493, 879, 1164, 1234
Hpy188I	TCNGA	6 cut(s)	159, 176, 207, 435, 847, 987
Hpy188III	TCNNGA	6 cut(s)	67, 997, 1013, 1028, 1118, 1177
Hpy8I	GTNNAC	7 cut(s)	78, 193, 417, 493, 879, 1164, 1234
Hpy99I	CGWCG	6 cut(s)	40, 68, 128, 194, 353, 457
HpyAV	CCTTC	8 cut(s)	320, 454, 532, 596, 682, 686, 754, 1284
HpyCH4III	ACNGT	6 cut(s)	16, 235, 1082, 1198, 1204, 1240
HpyCH4V	TGCA	5 cut(s)	809, 1094, 1111, 1287, 1345
HpyF10VI	GCNNNNNNNGC	5 cut(s)	264, 410, 652, 847, 1108
HpyF3I	CTNAG	7 cut(s)	158, 204, 302, 912, 995, 1158, 1213
Hsp92I	GRCGYC	1 cut(s)	222
HspAI	GCGC	4 cut(s)	222, 272, 376, 404
KasI	GGCGCC	1 cut(s)	221
Ksp22I	TGATCA	1 cut(s)	1114
Kzo9I	GATC	3 cut(s)	154, 510, 1114
LguI	GCTCTTC	2 cut(s)	626, 1175
LmnI	GCTCC	5 cut(s)	203, 395, 847, 1030, 1075
Lsp1109I	GCAGC	4 cut(s)	261, 766, 814, 1086
LweI	GCATC	3 cut(s)	17, 465, 898
MaeI	CTAG	1 cut(s)	471
MaeIII	GTNAC	2 cut(s)	161, 1198
MalI	GATC	3 cut(s)	156, 512, 1116
MbiI	CCGCTC	3 cut(s)	198, 203, 261
MboI	GATC	3 cut(s)	154, 510, 1114
MflI	RGATCY	1 cut(s)	154
MhlI	GDGCHC	2 cut(s)	945, 1072
MlsI	TGGCCA	1 cut(s)	1340
MluCI	AATT	5 cut(s)	575, 584, 626, 871, 1005
MluNI	TGGCCA	1 cut(s)	1340
Mly113I	GGCGCC	1 cut(s)	222
MlyI	GAGTC	2 cut(s)	169, 1205
MmeI	TCCRAC	4 cut(s)	413, 505, 1188, 1227
Mox20I	TGGCCA	1 cut(s)	1340
Mph1103I	ATGCAT	1 cut(s)	811
MscI	TGGCCA	1 cut(s)	1340
MseI	TTAA	2 cut(s)	990, 1354
MslI	CAYNNNNRTG	2 cut(s)	906, 1311
Msp20I	TGGCCA	1 cut(s)	1340
MspA1I	CMGCKG	1 cut(s)	1217
MspI	CCGG	6 cut(s)	43, 219, 279, 505, 570, 945
MspR9I	CCNGG	6 cut(s)	43, 279, 571, 677, 945, 946
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	1 cut(s)	677
MvnI	CGCG	1 cut(s)	404
MwoI	GCNNNNNNNGC	5 cut(s)	264, 410, 652, 847, 1108
NarI	GGCGCC	1 cut(s)	222
NciI	CCSGG	5 cut(s)	43, 279, 571, 945, 946
NcoI	CCATGG	1 cut(s)	408
NdeI	CATATG	1 cut(s)	1168
NdeII	GATC	3 cut(s)	154, 510, 1114
NlaIV	GGNNCC	5 cut(s)	223, 283, 308, 391, 849
NmuCI	GTSAC	2 cut(s)	161, 1198
NsiI	ATGCAT	1 cut(s)	811
NspI	RCATGY	2 cut(s)	779, 1037
PaeI	GCATGC	1 cut(s)	779
PaeR7I	CTCGAG	1 cut(s)	1175
PciSI	GCTCTTC	2 cut(s)	626, 1175
PcsI	WCGNNNNNNNCGW	3 cut(s)	32, 63, 99
PctI	GAATGC	1 cut(s)	841
PkrI	GCNGC	8 cut(s)	48, 260, 276, 400, 403, 781, 829, 1101
PleI	GAGTC	2 cut(s)	168, 1205
PluTI	GGCGCC	1 cut(s)	225
PpsI	GAGTC	2 cut(s)	168, 1205
Psp6I	CCWGG	1 cut(s)	675
PspGI	CCWGG	1 cut(s)	675
PspN4I	GGNNCC	5 cut(s)	223, 283, 308, 391, 849
PspPI	GGNCC	3 cut(s)	75, 120, 361
PstNI	CAGNNNCTG	1 cut(s)	1202
PsuI	RGATCY	1 cut(s)	154
PvuII	CAGCTG	1 cut(s)	1217
RseI	CAYNNNNRTG	2 cut(s)	906, 1311
SalI	GTCGAC	1 cut(s)	191
SapI	GCTCTTC	2 cut(s)	626, 1175
SaqAI	TTAA	2 cut(s)	990, 1354
SatI	GCNGC	8 cut(s)	47, 259, 275, 399, 402, 780, 828, 1100
Sau3AI	GATC	3 cut(s)	154, 510, 1114
Sau96I	GGNCC	3 cut(s)	75, 120, 361
SchI	GAGTC	2 cut(s)	169, 1205
ScrFI	CCNGG	6 cut(s)	43, 279, 571, 677, 945, 946
SduI	GDGCHC	2 cut(s)	945, 1072
SfaNI	GCATC	3 cut(s)	17, 465, 898
SfoI	GGCGCC	1 cut(s)	223
Sfr274I	CTCGAG	1 cut(s)	1175
SinI	GGWCC	1 cut(s)	75
SlaI	CTCGAG	1 cut(s)	1175
SmaI	CCCGGG	1 cut(s)	946
SmiMI	CAYNNNNRTG	2 cut(s)	906, 1311
SmlI	CTYRAG	1 cut(s)	1175
SmoI	CTYRAG	1 cut(s)	1175
SphI	GCATGC	1 cut(s)	779
SrfI	GCCCGGGC	1 cut(s)	946
Sse9I	AATT	5 cut(s)	575, 584, 626, 871, 1005
SspDI	GGCGCC	1 cut(s)	221
SspMI	CTAG	1 cut(s)	471
StyD4I	CCNGG	6 cut(s)	41, 277, 569, 675, 943, 944
StyI	CCWWGG	2 cut(s)	408, 1074
TaaI	ACNGT	6 cut(s)	16, 235, 1082, 1198, 1204, 1240
TaqI	TCGA	9 cut(s)	11, 66, 87, 192, 447, 455, 513, 723, 1176
TaqII	GACCGA	1 cut(s)	943
TasI	AATT	5 cut(s)	575, 584, 626, 871, 1005
TauI	GCSGC	4 cut(s)	49, 261, 401, 404
Tru1I	TTAA	2 cut(s)	990, 1354
Tru9I	TTAA	2 cut(s)	990, 1354
TscAI	CASTG	3 cut(s)	956, 1207, 1245
TseFI	GTSAC	2 cut(s)	161, 1198
TseI	GCWGC	4 cut(s)	274, 779, 827, 1099
Tsp45I	GTSAC	2 cut(s)	161, 1198
TspDTI	ATGAA	4 cut(s)	473, 890, 1295, 1329
TspGWI	ACGGA	1 cut(s)	948
TspMI	CCCGGG	1 cut(s)	944
TspRI	CASTG	3 cut(s)	956, 1207, 1245
VpaK11BI	GGWCC	1 cut(s)	75
XceI	RCATGY	2 cut(s)	779, 1037
XhoI	CTCGAG	1 cut(s)	1175
XmaI	CCCGGG	1 cut(s)	944
XmiI	GTMKAC	1 cut(s)	192
XspI	CTAG	1 cut(s)	471
Zsp2I	ATGCAT	1 cut(s)	811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.