Rmu_sc0007290.1_g000001

SUN domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007290.1
Physical Location & Seq
Reverse (-)
6518 .. 9849
3332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007290.1_g000001.1.cds

Sequence Viewer

Length: 1263 bp
atggcgaagaagcataagggccagcagcattccacggacgacgggaaagggaaggaagatatgtcagtctcagcgagaaaacttacagctatgttgtgggagatcaatgaagtccttgatttgaaaagcaaagtttctaaaatcagagaggaggaggtttccctcgtttttcaaatttctcccgtaaaatgtcggcatcgattgtatctatcacggcgaacccaacgacccgtcgtggccatcgagaagaggtcgaccaacatcgaactcgtctccgccgaaccgactgccgacgacgacccccgacccgaaaccgccgtcaaccgctcggcccagacccgtagaaccggcgccacttccaccgtctctcccccctccgctactcgcagctcccggaaagccctccccggaactaagcgacctcgctggctcaggttcgtttgtattttcggcaagtggttcggtcttcttgttttcgtcggcggtttggcccagatactcatacgcctcgcttacggctccactgccgccgcgcccatggcgttcaccgacttggagggtcggattgcggaggtcgaagcgtcgatgaaggagacctctaggatgcttcaggttggggtcgacgtggcgagccggaagatcgataaggaggtcggagagttgaggaaggaggtggaggacagaggggtggctttggccggtgaattgaggaaattggaggtgaaaagcgaagggctggagaggtctgtggaggaattgaagagcgtggagtggctgtccaagcaagagtttgaggggatttaccaggagttgaagaaggaagggaagagtggtgagttgggtgcgagtttcgatgatataatggcgtatgccaggaatgtggtggagaaggagatagagaagcatgctgcggatgggcttgcaagggtggattatgcattggggagtggcggtgctgcggttgtgaagcattcggagccttatgtggtggggaaagggaattggtggacgagtatgaggaatggggttcatagtgatgctgataagatgttgagaccgagttttggagagcccgggcagtgttttccattgaaagggagtagtgggtttgttcagattaagctcaggacagcaattattcccgaggctatcactctggagcatgtttcaaaggtaaacgtaggatggatatcttatgttggtttcagtaggtgcacagacactgtttataggaaagtcttaggagccagcctacatttgtaa

Protein Analysis

420

Amino Acids

46.49

Weight (kDa)

9.32

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 350
AccBSI CCGCTC 1 cut(s) 327
AccI GTMKAC 2 cut(s) 254, 621
AccII CGCG 1 cut(s) 533
AcoI YGGCCR 2 cut(s) 237, 696
AcsI RAATTY 1 cut(s) 174
AcuI CTGAAG 1 cut(s) 593
AcyI GRCGYC 1 cut(s) 351
AfiI CCNNNNNNNGG 2 cut(s) 1064, 1094
AgsI TTSAA 6 cut(s) 124, 173, 760, 814, 1093, 1170
AjiI CACGTC 1 cut(s) 625
AjnI CCWGG 2 cut(s) 804, 872
AluBI AGCT 3 cut(s) 89, 390, 1123
AluI AGCT 3 cut(s) 89, 390, 1123
Alw21I GWGCWC 1 cut(s) 1217
Alw26I GTCTC 5 cut(s) 73, 277, 370, 587, 1048
Alw44I GTGCAC 1 cut(s) 1213
AlwNI CAGNNNCTG 1 cut(s) 1223
Ama87I CYCGRG 2 cut(s) 1073, 1142
AoxI GGCC 5 cut(s) 19, 237, 330, 489, 696
ApaLI GTGCAC 1 cut(s) 1213
ApeKI GCWGC 4 cut(s) 25, 387, 908, 956
ApoI RAATTY 1 cut(s) 174
ArsI GACNNNNNNTTYG 2 cut(s) 303, 335
AspLEI GCGC 2 cut(s) 353, 535
AspS9I GGNCC 3 cut(s) 19, 331, 490
AsuC2I CCSGG 4 cut(s) 394, 408, 1074, 1075
AsuHPI GGTGA 4 cut(s) 538, 713, 733, 845
AvaI CYCGRG 2 cut(s) 1073, 1142
BaeGI GKGCMC 1 cut(s) 1217
BalI TGGCCA 1 cut(s) 239
BanI GGYRCC 1 cut(s) 350
BanII GRGCYC 1 cut(s) 1074
BbsI GAAGAC 1 cut(s) 458
Bbv12I GWGCWC 1 cut(s) 1217
BbvI GCAGC 4 cut(s) 37, 399, 895, 943
BccI CCATC 3 cut(s) 248, 908, 1179
BceAI ACGGC 3 cut(s) 230, 302, 532
BcgI CGANNNNNNTGC 4 cut(s) 269, 303, 442, 476
BciT130I CCWGG 2 cut(s) 806, 874
BcnI CCSGG 4 cut(s) 394, 408, 1074, 1075
BcoDI GTCTC 5 cut(s) 73, 277, 370, 587, 1048
BfaI CTAG 1 cut(s) 600
BfoI RGCGCY 1 cut(s) 354
BisI GCNGC 6 cut(s) 26, 388, 528, 531, 909, 957
BlsI GCNGC 6 cut(s) 27, 389, 529, 532, 910, 958
Bme1390I CCNGG 6 cut(s) 394, 408, 806, 874, 1074, 1075
BmeT110I CYCGRG 2 cut(s) 1073, 1142
BmgBI CACGTC 1 cut(s) 625
BmgT120I GGNCC 3 cut(s) 19, 331, 490
BmiI GGNNCC 4 cut(s) 352, 520, 978, 1246
BmrFI CCNGG 6 cut(s) 394, 408, 806, 874, 1074, 1075
BmsI GCATC 3 cut(s) 205, 594, 1027
BpiI GAAGAC 1 cut(s) 458
BpmI CTGGAG 2 cut(s) 758, 1178
Bpu10I CCTNAGC 2 cut(s) 431, 1124
BpuMI CCSGG 4 cut(s) 394, 408, 1074, 1075
Bsa29I ATCGAT 2 cut(s) 199, 642
BsaBI GATNNNNATC 1 cut(s) 1189
BsaHI GRCGYC 1 cut(s) 351
BsaI GGTCTC 2 cut(s) 587, 1048
BsaJI CCNNGG 5 cut(s) 33, 406, 537, 1073, 1143
BsaXI ACNNNNNCTCC 6 cut(s) 352, 382, 761, 791, 937, 967
Bsc4I CCNNNNNNNGG 2 cut(s) 1064, 1094
Bse118I RCCGGY 2 cut(s) 347, 698
Bse8I GATNNNNATC 1 cut(s) 1189
BseBI CCWGG 2 cut(s) 806, 874
BseCI ATCGAT 2 cut(s) 199, 642
BseDI CCNNGG 5 cut(s) 33, 406, 537, 1073, 1143
BseGI GGATG 3 cut(s) 609, 919, 1190
BseJI GATNNNNATC 1 cut(s) 1189
BseLI CCNNNNNNNGG 2 cut(s) 1064, 1094
BseMII CTCAG 3 cut(s) 84, 445, 1138
BseRI GAGGAG 2 cut(s) 164, 167
BseSI GKGCMC 1 cut(s) 1217
BseXI GCAGC 4 cut(s) 37, 399, 895, 943
Bsh1236I CGCG 1 cut(s) 533
BshFI GGCC 5 cut(s) 21, 239, 332, 491, 698
BshNI GGYRCC 1 cut(s) 350
BshVI ATCGAT 2 cut(s) 199, 642
BsiHKAI GWGCWC 1 cut(s) 1217
BsiHKCI CYCGRG 2 cut(s) 1073, 1142
BsiSI CCGG 6 cut(s) 348, 394, 408, 634, 699, 1074
BslI CCNNNNNNNGG 2 cut(s) 1064, 1094
BsmAI GTCTC 5 cut(s) 73, 277, 370, 587, 1048
BsmBI CGTCTC 2 cut(s) 277, 370
BsmI GAATGC 2 cut(s) 28, 970
BsnI GGCC 5 cut(s) 21, 239, 332, 491, 698
Bso31I GGTCTC 2 cut(s) 587, 1048
BsoBI CYCGRG 2 cut(s) 1073, 1142
Bsp1286I GDGCHC 2 cut(s) 1074, 1217
Bsp143I GATC 2 cut(s) 102, 639
Bsp19I CCATGG 1 cut(s) 537
BspANI GGCC 5 cut(s) 21, 239, 332, 491, 698
BspCNI CTCAG 3 cut(s) 83, 444, 1137
BspDI ATCGAT 2 cut(s) 199, 642
BspFNI CGCG 1 cut(s) 533
BspLI GGNNCC 4 cut(s) 352, 520, 978, 1246
BspQI GCTCTTC 1 cut(s) 755
BspT107I GGYRCC 1 cut(s) 350
BspTNI GGTCTC 2 cut(s) 587, 1048
BsrBI CCGCTC 1 cut(s) 327
BsrFI RCCGGY 2 cut(s) 347, 698
BssAI RCCGGY 2 cut(s) 347, 698
BssECI CCNNGG 5 cut(s) 33, 406, 537, 1073, 1143
BssMI GATC 2 cut(s) 102, 639
BssNI GRCGYC 1 cut(s) 351
BssT1I CCWWGG 1 cut(s) 537
Bst2UI CCWGG 2 cut(s) 806, 874
Bst4CI ACNGT 2 cut(s) 364, 1225
Bst6I CTCTTC 3 cut(s) 242, 755, 821
BstACI GRCGYC 1 cut(s) 351
BstC8I GCNNGC 6 cut(s) 23, 428, 631, 906, 921, 1249
BstDEI CTNAG 5 cut(s) 70, 414, 431, 1124, 1240
BstDSI CCRYGG 2 cut(s) 33, 537
BstF5I GGATG 3 cut(s) 609, 919, 1190
BstFNI CGCG 1 cut(s) 533
BstH2I RGCGCY 1 cut(s) 354
BstHHI GCGC 2 cut(s) 353, 535
BstKTI GATC 2 cut(s) 105, 642
BstMAI GTCTC 5 cut(s) 73, 277, 370, 587, 1048
BstMBI GATC 2 cut(s) 102, 639
BstMWI GCNNNNNNNGC 3 cut(s) 539, 781, 976
BstNI CCWGG 2 cut(s) 806, 874
BstNSI RCATGY 2 cut(s) 908, 1166
BstSCI CCNGG 6 cut(s) 392, 406, 804, 872, 1072, 1073
BstSLI GKGCMC 1 cut(s) 1217
BstUI CGCG 1 cut(s) 533
BstV1I GCAGC 4 cut(s) 37, 399, 895, 943
BstV2I GAAGAC 1 cut(s) 458
BstXI CCANNNNNNTGG 1 cut(s) 880
Bsu15I ATCGAT 2 cut(s) 199, 642
BsuRI GGCC 5 cut(s) 21, 239, 332, 491, 698
BsuTUI ATCGAT 2 cut(s) 199, 642
BtgI CCRYGG 2 cut(s) 33, 537
BtrI CACGTC 1 cut(s) 625
BtsCI GGATG 3 cut(s) 609, 919, 1190
BtsI GCAGTG 2 cut(s) 522, 1085
BtsIMutI CAGTG 3 cut(s) 522, 1085, 1221
Cac8I GCNNGC 6 cut(s) 23, 428, 631, 906, 921, 1249
CaiI CAGNNNCTG 1 cut(s) 1223
CfoI GCGC 2 cut(s) 353, 535
Cfr10I RCCGGY 2 cut(s) 347, 698
Cfr13I GGNCC 3 cut(s) 19, 331, 490
Cfr9I CCCGGG 1 cut(s) 1073
ClaI ATCGAT 2 cut(s) 199, 642
CseI GACGC 1 cut(s) 570
CviAII CATG 3 cut(s) 538, 905, 1163
DdeI CTNAG 5 cut(s) 70, 414, 431, 1124, 1240
DinI GGCGCC 1 cut(s) 352
DpnI GATC 2 cut(s) 104, 641
DpnII GATC 2 cut(s) 102, 639
EaeI YGGCCR 2 cut(s) 237, 696
Eam1104I CTCTTC 3 cut(s) 242, 755, 821
EarI CTCTTC 3 cut(s) 242, 755, 821
EciI GGCGGA 1 cut(s) 265
Eco130I CCWWGG 1 cut(s) 537
Eco24I GRGCYC 1 cut(s) 1074
Eco31I GGTCTC 2 cut(s) 587, 1048
Eco32I GATATC 1 cut(s) 1191
Eco57I CTGAAG 1 cut(s) 593
Eco88I CYCGRG 2 cut(s) 1073, 1142
EcoRII CCWGG 2 cut(s) 804, 872
EcoRV GATATC 1 cut(s) 1191
EcoT14I CCWWGG 1 cut(s) 537
EcoT22I ATGCAT 1 cut(s) 940
EcoT38I GRGCYC 1 cut(s) 1074
EgeI GGCGCC 1 cut(s) 352
EheI GGCGCC 1 cut(s) 352
ErhI CCWWGG 1 cut(s) 537
Esp3I CGTCTC 2 cut(s) 277, 370
FaeI CATG 3 cut(s) 541, 908, 1166
FatI CATG 3 cut(s) 537, 904, 1162
FblI GTMKAC 2 cut(s) 254, 621
Fnu4HI GCNGC 6 cut(s) 26, 388, 528, 531, 909, 957
FokI GGATG 3 cut(s) 616, 926, 1197
FriOI GRGCYC 1 cut(s) 1074
Fsp4HI GCNGC 6 cut(s) 26, 388, 528, 531, 909, 957
FspBI CTAG 1 cut(s) 600
GlaI GCGC 2 cut(s) 352, 534
GluI GCNGC 6 cut(s) 26, 388, 528, 531, 909, 957
GsuI CTGGAG 2 cut(s) 758, 1178
HaeII RGCGCY 1 cut(s) 354
HaeIII GGCC 5 cut(s) 21, 239, 332, 491, 698
HapII CCGG 6 cut(s) 348, 394, 408, 634, 699, 1074
HgaI GACGC 1 cut(s) 570
HhaI GCGC 2 cut(s) 353, 535
Hin1I GRCGYC 1 cut(s) 351
Hin1II CATG 3 cut(s) 541, 908, 1166
Hin6I GCGC 2 cut(s) 351, 533
HinP1I GCGC 2 cut(s) 351, 533
HincII GTYRAC 3 cut(s) 255, 322, 622
HindII GTYRAC 3 cut(s) 255, 322, 622
HpaII CCGG 6 cut(s) 348, 394, 408, 634, 699, 1074
HphI GGTGA 4 cut(s) 538, 713, 733, 845
Hpy166II GTNNAC 7 cut(s) 255, 322, 546, 622, 1008, 1177, 1215
Hpy188I TCNGA 5 cut(s) 146, 564, 656, 976, 1116
Hpy188III TCNNGA 4 cut(s) 244, 1126, 1142, 1157
Hpy8I GTNNAC 7 cut(s) 255, 322, 546, 622, 1008, 1177, 1215
Hpy99I CGWCG 7 cut(s) 44, 236, 296, 299, 482, 586, 626
HpyAV CCTTC 7 cut(s) 46, 583, 661, 725, 811, 815, 883
HpyCH4III ACNGT 2 cut(s) 364, 1225
HpyCH4IV ACGT 2 cut(s) 624, 1179
HpyCH4V TGCA 3 cut(s) 923, 938, 1215
HpyF10VI GCNNNNNNNGC 3 cut(s) 539, 781, 976
HpyF3I CTNAG 5 cut(s) 70, 414, 431, 1124, 1240
HpySE526I ACGT 2 cut(s) 624, 1179
Hsp92I GRCGYC 1 cut(s) 351
Hsp92II CATG 3 cut(s) 541, 908, 1166
HspAI GCGC 2 cut(s) 351, 533
KasI GGCGCC 1 cut(s) 350
Kzo9I GATC 2 cut(s) 102, 639
LguI GCTCTTC 1 cut(s) 755
LmnI GCTCC 5 cut(s) 395, 524, 976, 1159, 1244
Lsp1109I GCAGC 4 cut(s) 37, 399, 895, 943
LweI GCATC 3 cut(s) 205, 594, 1027
MaeI CTAG 1 cut(s) 600
MaeII ACGT 2 cut(s) 624, 1179
MalI GATC 2 cut(s) 104, 641
MbiI CCGCTC 1 cut(s) 327
MboI GATC 2 cut(s) 102, 639
MboII GAAGA 8 cut(s) 19, 68, 259, 458, 649, 772, 826, 838
MhlI GDGCHC 2 cut(s) 1074, 1217
MlsI TGGCCA 1 cut(s) 239
MluCI AATT 6 cut(s) 174, 704, 713, 755, 1000, 1134
MluNI TGGCCA 1 cut(s) 239
Mly113I GGCGCC 1 cut(s) 351
MmeI TCCRAC 2 cut(s) 542, 634
Mox20I TGGCCA 1 cut(s) 239
Mph1103I ATGCAT 1 cut(s) 940
MscI TGGCCA 1 cut(s) 239
MseI TTAA 1 cut(s) 1119
MslI CAYNNNNRTG 1 cut(s) 1035
Msp20I TGGCCA 1 cut(s) 239
MspI CCGG 6 cut(s) 348, 394, 408, 634, 699, 1074
MspR9I CCNGG 6 cut(s) 394, 408, 806, 874, 1074, 1075
Mva1269I GAATGC 2 cut(s) 28, 970
MvaI CCWGG 2 cut(s) 806, 874
MvnI CGCG 1 cut(s) 533
MwoI GCNNNNNNNGC 3 cut(s) 539, 781, 976
NarI GGCGCC 1 cut(s) 351
NciI CCSGG 4 cut(s) 394, 408, 1074, 1075
NcoI CCATGG 1 cut(s) 537
NdeII GATC 2 cut(s) 102, 639
NlaIII CATG 3 cut(s) 541, 908, 1166
NlaIV GGNNCC 4 cut(s) 352, 520, 978, 1246
NmeAIII GCCGAG 1 cut(s) 308
NsiI ATGCAT 1 cut(s) 940
NspI RCATGY 2 cut(s) 908, 1166
PaeI GCATGC 1 cut(s) 908
PciSI GCTCTTC 1 cut(s) 755
PcsI WCGNNNNNNNCGW 2 cut(s) 240, 276
PctI GAATGC 2 cut(s) 28, 970
PfoI TCCNGGA 1 cut(s) 392
PkrI GCNGC 6 cut(s) 27, 389, 529, 532, 910, 958
PluTI GGCGCC 1 cut(s) 354
Psp6I CCWGG 2 cut(s) 804, 872
PspGI CCWGG 2 cut(s) 804, 872
PspN4I GGNNCC 4 cut(s) 352, 520, 978, 1246
PspPI GGNCC 3 cut(s) 19, 331, 490
PstNI CAGNNNCTG 1 cut(s) 1223
RseI CAYNNNNRTG 1 cut(s) 1035
SalI GTCGAC 2 cut(s) 253, 620
SapI GCTCTTC 1 cut(s) 755
SaqAI TTAA 1 cut(s) 1119
SatI GCNGC 6 cut(s) 26, 388, 528, 531, 909, 957
Sau3AI GATC 2 cut(s) 102, 639
Sau96I GGNCC 3 cut(s) 19, 331, 490
ScrFI CCNGG 6 cut(s) 394, 408, 806, 874, 1074, 1075
SduI GDGCHC 2 cut(s) 1074, 1217
SfaNI GCATC 3 cut(s) 205, 594, 1027
SfoI GGCGCC 1 cut(s) 352
SmaI CCCGGG 1 cut(s) 1075
SmiMI CAYNNNNRTG 1 cut(s) 1035
SphI GCATGC 1 cut(s) 908
SrfI GCCCGGGC 1 cut(s) 1075
Sse9I AATT 6 cut(s) 174, 704, 713, 755, 1000, 1134
SspDI GGCGCC 1 cut(s) 350
SspMI CTAG 1 cut(s) 600
StyD4I CCNGG 6 cut(s) 392, 406, 804, 872, 1072, 1073
StyI CCWWGG 1 cut(s) 537
TaaI ACNGT 2 cut(s) 364, 1225
TaiI ACGT 2 cut(s) 627, 1182
TaqI TCGA 9 cut(s) 199, 243, 254, 264, 576, 584, 621, 642, 852
TaqII GACCGA 2 cut(s) 452, 1072
TasI AATT 6 cut(s) 174, 704, 713, 755, 1000, 1134
TauI GCSGC 2 cut(s) 530, 533
Tru1I TTAA 1 cut(s) 1119
Tru9I TTAA 1 cut(s) 1119
TscAI CASTG 3 cut(s) 529, 1085, 1228
TseI GCWGC 4 cut(s) 25, 387, 908, 956
TspDTI ATGAA 3 cut(s) 123, 602, 1019
TspGWI ACGGA 1 cut(s) 50
TspMI CCCGGG 1 cut(s) 1073
TspRI CASTG 3 cut(s) 529, 1085, 1228
VneI GTGCAC 1 cut(s) 1213
XapI RAATTY 1 cut(s) 174
XceI RCATGY 2 cut(s) 908, 1166
XcmI CCANNNNNNNNNTGG 1 cut(s) 880
XmaI CCCGGG 1 cut(s) 1073
XmiI GTMKAC 2 cut(s) 254, 621
XspI CTAG 1 cut(s) 600
Zsp2I ATGCAT 1 cut(s) 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.