Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001944.1

Orthogroup ID

OG0002096

Physical Location & Seq

Genomic Coordinates Forward (+)

11069 .. 13713

Gene Structure 2645 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

atggatactcatgtagtacattctcgtgctgaaggtgaagatgaagaccaccatgagaagaagtcggttttgaagaaggtgaaggcgaaagcgaggaagttaaaggagaccatcacagggcatggccatcacggccatgaacacgaaggccatcatactcctgatgatcatgatctggatgaggaagatgacgaagaggtagacgacccagaagttcatggtgcaccgatatacgactcggcagttaggaggactgatgctcctatgcaaggagacattttgaaagtgcctatggtgaattttggagacactagagcggggcatgatgaatatgatcctgtagttccaagtgagaggtctaatgtgcctgggctacatgaaaatacaggccatggtgcaatgtcaagagagaggactaatgtgggatttagtggaccggtgagggattttgtgcctgggcaaaatcgaactactacagggcatgaggatcttttgggaggagcaaagaccaaactggctggtccaacaactggacctgttcttaagcatgaagagccaaagggattggttgatgtaattgggggaggtcctcattcgccgcacaacacccctgtttctcctcttcctcatcatggaaattacaacactcttaccatggatgttgaccgaggtaagacttttggctccgggcaaggagggcatttaggtcagaccagggtcaaattggagaagactgatgtattaggggaaggaactccagagccacagagtacccctgtttcttctgttgctcatgcaactcacagaagtacaatgggcgtcgacccaaggcagacatttgtatccgggcaggtagggcatttaggtcagtccagggtcaatttggaccgacctagaggacttgaggaagaccctcatgcgcctatggccaatccccaagcttacactccttcaaattacgagaccaaagtcactgatcccaccaaatctggtggtcaggaaattggagttacaccaatacttcattccttcgataagatgaacctacatggtgatgatcgccaatccttgaacaatggtgccaaacacaatctgtctaccggaagccatgaccaattctctcctggaaaaccatcaaaccagggcagcacctacactgaaaaaatctcatctgccacttcagccattgccgacaaggaaatttcagcaaagaatgcagttgcttccaagttgggatatggtgggaacgcgcctgatcatgatgactactcgagaggatatgttactggtgctgggaagtctggttcatcacctcggaacaaagtacttgatccctctactaaccaattcagaccagaagaggctctacaagtccgaggaaccatcaaaccggaatatgataccacaactgatcagaagccagtccagacaggcggaagctatactgagaagatttcatctgccggatctgccattgctgacaaggtgatatccgcaaagaatgttgttgcgtccaagctgggatatggggcaagtgatcaggtgcatgacagggaaggtgttactcgtactaatatgcagtctgggacaacagcagcggatcaacatggcaagacgattacctctacagttgcggagaagataacacctgtgtatgagaaggttgccggggcagggactgctgtgatgtccaagcttcaaggcgggagtactgttagtactgaccgagatactagtactggcgttgttaatcaagctggacaggacaagggggtgtctgtgaaggactatttcgtggagaagctgaggcccggagaggaggacagagcactttctaaggttataagtgagacattacacaagcataagccgggtgttaagcaagagacagggtactctgctagtgctaggcccaaggggaaggtgacggagtcggtggaggtgaggcagcgtttgggggataccgaggggaatgagaattttatagtggataagattaaggactctgttggttcgatgcttggtggtactaacaacagtgatgaagaacgtcggcaaggtctctctagctctgctggtaccggggaggaagatcggcgcggtgtttgtgtggtggagcaccggaggctacaggaatccggcaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009611 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010150 GO:0010555 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042538 GO:0043207 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048511 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:1901700 GO:1901701 GO:1902074 GO:2000026 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAP160

Protein Analysis

715

Amino Acids

76.44

Weight (kDa)

6.08

Isoelectric Point (pI)

30.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LTI65_LTI78_N	PF23403	16 - 82	2.5e-27	LTI65/LTI78 CAP160 N-terminal
LTI65_LTI78_NYQTKV	PF23402	292 - 351	3e-31	LTI65/LTI78 NYQTKV repeat
CAP160	PF07918	389 - 415	5.7e-15	CAP160 repeat
CAP160	PF07918	485 - 510	3.7e-12	CAP160 repeat
LTI65_PGEED	PF23399	589 - 619	7.2e-19	LTI65/LTI78 PGEED repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25580 AT4G25580 AT5G52300 AT5G52300 AT5G52310
fragaria_vesca	FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29491
malus_domestica	MD01G1201000.v1.1 MD07G1268800.v1.1
prunus_persica	Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1
pyrus_communis	pycom07g24640
rosa_chinensis	RchiOBHm_Chr1g0377291 RchiOBHm_Chr1g0377331
rosa_laevigata	RLG00000026530
rosa_multiflora	Rmu_co8507117.1_g000001 Rmu_sc0001944.1_g000005 Rmu_sc0017163.1_g000001 Rmu_sc0022060.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281320 Rroxscaffold_4G00281330
rosa_rugosa	Rorug01G0402700
rosa_samantha	Rh1AG420000 Rh1AG420500 Rh1BG379000 Rh1BG379100 Rh1BG379200 Rh1BG379300 Rh1CG393000 Rh1CG393100 Rh1CG393200 Rh1CG393300 Rh1DG409600 Rh1DG409700 Rh1DG409800 Rh1DG410300
rosa_wichuraiana	Rw1G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1844
Acc36I	ACCTGC	1 cut(s)	841
Acc65I	GGTACC	1 cut(s)	2078
AccB1I	GGYRCC	2 cut(s)	1079, 2078
AccB7I	CCANNNNNTGG	1 cut(s)	530
AccBSI	CCGCTC	1 cut(s)	317
AccI	GTMKAC	3 cut(s)	201, 822, 1097
AccII	CGCG	2 cut(s)	1250, 2100
AciI	CCGC	8 cut(s)	317, 599, 1434, 1494, 1598, 1634, 1704, 2100
AclWI	GGATC	6 cut(s)	329, 495, 971, 1325, 1474, 1608
AcoI	YGGCCR	3 cut(s)	124, 133, 927
AcsI	RAATTY	3 cut(s)	298, 1200, 1978
AcuI	CTGAAG	2 cut(s)	51, 1164
AcyI	GRCGYC	1 cut(s)	819
AfiI	CCNNNNNNNGG	5 cut(s)	117, 269, 530, 632, 1674
AflII	CTTAAG	1 cut(s)	542
AgeI	ACCGGT	1 cut(s)	436
AgsI	TTSAA	5 cut(s)	73, 283, 954, 1072, 1700
AhlI	ACTAGT	1 cut(s)	1733
AjnI	CCWGG	6 cut(s)	367, 454, 713, 872, 1123, 1140
AjuI	GAANNNNNNNTTGG	2 cut(s)	1009, 1041
AloI	GAACNNNNNNTCC	2 cut(s)	1288, 1320
AluBI	AGCT	7 cut(s)	941, 1440, 1519, 1696, 1757, 1804, 2070
AluI	AGCT	7 cut(s)	941, 1440, 1519, 1696, 1757, 1804, 2070
Alw21I	GWGCWC	3 cut(s)	226, 1831, 2121
Alw26I	GTCTC	7 cut(s)	101, 267, 300, 956, 1844, 1880, 2066
Alw44I	GTGCAC	1 cut(s)	222
AlwI	GGATC	6 cut(s)	329, 495, 971, 1325, 1474, 1608
AlwNI	CAGNNNCTG	1 cut(s)	1679
Ama87I	CYCGRG	1 cut(s)	1270
AoxI	GGCC	7 cut(s)	124, 133, 148, 388, 927, 1808, 1910
ApaLI	GTGCAC	1 cut(s)	222
ApeKI	GCWGC	3 cut(s)	1146, 1595, 1948
ApoI	RAATTY	3 cut(s)	298, 1200, 1978
AsiGI	ACCGGT	1 cut(s)	436
Asp718I	GGTACC	1 cut(s)	2078
AspLEI	GCGC	3 cut(s)	922, 1252, 2100
AspS9I	GGNCC	7 cut(s)	434, 521, 533, 587, 886, 1809, 1911
AsuC2I	CCSGG	6 cut(s)	688, 847, 1669, 1812, 1872, 2083
AsuHPI	GGTGA	9 cut(s)	47, 91, 307, 451, 1064, 1302, 1498, 1936, 1954
AvaI	CYCGRG	1 cut(s)	1270
AvaII	GGWCC	5 cut(s)	434, 521, 533, 587, 886
BaeGI	GKGCMC	1 cut(s)	226
BaeI	ACNNNNGTAYC	3 cut(s)	30, 825, 858
BalI	TGGCCA	2 cut(s)	126, 929
BanI	GGYRCC	2 cut(s)	1079, 2078
BarI	GAAGNNNNNNTAC	2 cut(s)	1350, 1382
BauI	CACGAG	1 cut(s)	24
BbsI	GAAGAC	3 cut(s)	51, 737, 915
Bbv12I	GWGCWC	3 cut(s)	226, 1831, 2121
BbvCI	CCTCAGC	1 cut(s)	1805
BbvI	GCAGC	3 cut(s)	1158, 1607, 1960
BccI	CCATC	5 cut(s)	119, 135, 159, 1141, 1391
BceAI	ACGGC	1 cut(s)	148
BciT130I	CCWGG	6 cut(s)	369, 456, 715, 874, 1125, 1142
BciVI	GTATCC	2 cut(s)	853, 1954
BclI	TGATCA	4 cut(s)	166, 1255, 1411, 1537
BcnI	CCSGG	6 cut(s)	688, 847, 1669, 1812, 1872, 2083
BcoDI	GTCTC	7 cut(s)	101, 267, 300, 956, 1844, 1880, 2066
BcuI	ACTAGT	1 cut(s)	1733
BfaI	CTAG	6 cut(s)	312, 894, 1734, 1902, 1908, 2067
BfmI	CTRYAG	4 cut(s)	339, 474, 1626, 2129
BfrI	CTTAAG	1 cut(s)	542
BfuAI	ACCTGC	1 cut(s)	841
BfuI	GTATCC	2 cut(s)	853, 1954
BglI	GCCNNNNNGGC	1 cut(s)	132
BisI	GCNGC	4 cut(s)	599, 1147, 1596, 1949
BlsI	GCNGC	4 cut(s)	600, 1148, 1597, 1950
BmcAI	AGTACT	4 cut(s)	1326, 1711, 1720, 1738
Bme18I	GGWCC	5 cut(s)	434, 521, 533, 587, 886
BmeT110I	CYCGRG	1 cut(s)	1270
BmgT120I	GGNCC	7 cut(s)	434, 521, 533, 587, 886, 1809, 1911
BmiI	GGNNCC	4 cut(s)	685, 1081, 1381, 2080
BmsI	GCATC	2 cut(s)	247, 2007
BoxI	GACNNNNGTC	2 cut(s)	716, 968
BpiI	GAAGAC	3 cut(s)	51, 737, 915
BpmI	CTGGAG	1 cut(s)	741
Bpu10I	CCTNAGC	1 cut(s)	1805
BpuEI	CTTGAG	1 cut(s)	923
BpuMI	CCSGG	6 cut(s)	688, 847, 1669, 1812, 1872, 2083
BsaBI	GATNNNNATC	1 cut(s)	171
BsaHI	GRCGYC	1 cut(s)	819
BsaI	GGTCTC	3 cut(s)	101, 956, 2066
BsaWI	WCCGGW	4 cut(s)	436, 1100, 1390, 2121
BsaXI	ACNNNNNCTCC	2 cut(s)	244, 274
Bsc4I	CCNNNNNNNGG	5 cut(s)	117, 269, 530, 632, 1674
Bse118I	RCCGGY	1 cut(s)	436
Bse1I	ACTGG	5 cut(s)	519, 535, 1291, 1421, 1744
Bse3DI	GCAATG	3 cut(s)	405, 1185, 1473
Bse8I	GATNNNNATC	1 cut(s)	171
BseBI	CCWGG	6 cut(s)	369, 456, 715, 874, 1125, 1142
BseGI	GGATG	2 cut(s)	184, 664
BseJI	GATNNNNATC	1 cut(s)	171
BseLI	CCNNNNNNNGG	5 cut(s)	117, 269, 530, 632, 1674
BseMI	GCAATG	3 cut(s)	405, 1185, 1473
BseMII	CTCAG	2 cut(s)	1437, 1796
BseNI	ACTGG	5 cut(s)	519, 535, 1291, 1421, 1744
BseRI	GAGGAG	3 cut(s)	513, 609, 1832
BseSI	GKGCMC	1 cut(s)	226
BseXI	GCAGC	3 cut(s)	1158, 1607, 1960
BseYI	CCCAGC	2 cut(s)	1292, 1519
Bsh1236I	CGCG	2 cut(s)	1250, 2100
BshFI	GGCC	7 cut(s)	126, 135, 150, 390, 929, 1810, 1912
BshNI	GGYRCC	2 cut(s)	1079, 2078
BshTI	ACCGGT	1 cut(s)	436
BsiHKAI	GWGCWC	3 cut(s)	226, 1831, 2121
BsiHKCI	CYCGRG	1 cut(s)	1270
BslFI	GGGAC	2 cut(s)	1600, 1690
BslI	CCNNNNNNNGG	5 cut(s)	117, 269, 530, 632, 1674
BsmAI	GTCTC	7 cut(s)	101, 267, 300, 956, 1844, 1880, 2066
BsmFI	GGGAC	2 cut(s)	1600, 1690
BsmI	GAATGC	1 cut(s)	1219
BsnI	GGCC	7 cut(s)	126, 135, 150, 390, 929, 1810, 1912
Bso31I	GGTCTC	3 cut(s)	101, 956, 2066
BsoBI	CYCGRG	1 cut(s)	1270
Bsp1286I	GDGCHC	3 cut(s)	226, 1831, 2121
Bsp19I	CCATGG	2 cut(s)	391, 654
BspACI	CCGC	8 cut(s)	317, 599, 1434, 1494, 1598, 1634, 1704, 2100
BspANI	GGCC	7 cut(s)	126, 135, 150, 390, 929, 1810, 1912
BspCNI	CTCAG	2 cut(s)	1438, 1797
BspFNI	CGCG	2 cut(s)	1250, 2100
BspHI	TCATGA	2 cut(s)	169, 1258
BspLI	GGNNCC	4 cut(s)	685, 1081, 1381, 2080
BspMI	ACCTGC	1 cut(s)	841
BspPI	GGATC	6 cut(s)	329, 495, 971, 1325, 1474, 1608
BspQI	GCTCTTC	1 cut(s)	546
BspT107I	GGYRCC	2 cut(s)	1079, 2078
BspTI	CTTAAG	1 cut(s)	542
BspTNI	GGTCTC	3 cut(s)	101, 956, 2066
BsrBI	CCGCTC	1 cut(s)	317
BsrDI	GCAATG	3 cut(s)	405, 1185, 1473
BsrFI	RCCGGY	1 cut(s)	436
BsrI	ACTGG	5 cut(s)	519, 535, 1291, 1421, 1744
BssAI	RCCGGY	1 cut(s)	436
BssNI	GRCGYC	1 cut(s)	819
BssSI	CACGAG	1 cut(s)	24
BssT1I	CCWWGG	4 cut(s)	391, 654, 827, 1914
Bst2BI	CACGAG	1 cut(s)	24
Bst2UI	CCWGG	6 cut(s)	369, 456, 715, 874, 1125, 1142
Bst4CI	ACNGT	3 cut(s)	1630, 1714, 2039
Bst6I	CTCTTC	4 cut(s)	189, 546, 627, 1353
BstACI	GRCGYC	1 cut(s)	819
BstAFI	CTTAAG	1 cut(s)	542
BstAPI	GCANNNNNTGC	2 cut(s)	1214, 1679
BstDEI	CTNAG	3 cut(s)	1446, 1805, 1836
BstDSI	CCRYGG	2 cut(s)	391, 654
BstENI	CCTNNNNNAGG	1 cut(s)	267
BstF5I	GGATG	2 cut(s)	184, 664
BstFNI	CGCG	2 cut(s)	1250, 2100
BstHHI	GCGC	3 cut(s)	922, 1252, 2100
BstMAI	GTCTC	7 cut(s)	101, 267, 300, 956, 1844, 1880, 2066
BstNI	CCWGG	6 cut(s)	369, 456, 715, 874, 1125, 1142
BstPAI	GACNNNNGTC	2 cut(s)	716, 968
BstSFI	CTRYAG	4 cut(s)	339, 474, 1626, 2129
BstSLI	GKGCMC	1 cut(s)	226
BstUI	CGCG	2 cut(s)	1250, 2100
BstV1I	GCAGC	3 cut(s)	1158, 1607, 1960
BstV2I	GAAGAC	3 cut(s)	51, 737, 915
BstX2I	RGATCY	2 cut(s)	487, 1466
BstYI	RGATCY	2 cut(s)	487, 1466
BsuI	GTATCC	2 cut(s)	853, 1954
BsuRI	GGCC	7 cut(s)	126, 135, 150, 390, 929, 1810, 1912
BtgI	CCRYGG	2 cut(s)	391, 654
BtsCI	GGATG	2 cut(s)	184, 664
BtsIMutI	CAGTG	3 cut(s)	972, 1155, 2044
BveI	ACCTGC	1 cut(s)	841
CaiI	CAGNNNCTG	1 cut(s)	1679
CciI	TCATGA	2 cut(s)	169, 1258
CfoI	GCGC	3 cut(s)	922, 1252, 2100
Cfr10I	RCCGGY	1 cut(s)	436
Cfr13I	GGNCC	7 cut(s)	434, 521, 533, 587, 886, 1809, 1911
CseI	GACGC	2 cut(s)	808, 1500
CspAI	ACCGGT	1 cut(s)	436
CspCI	CAANNNNNGTGG	2 cut(s)	973, 1008
DdeI	CTNAG	3 cut(s)	1446, 1805, 1836
EaeI	YGGCCR	3 cut(s)	124, 133, 927
Eam1104I	CTCTTC	4 cut(s)	189, 546, 627, 1353
EarI	CTCTTC	4 cut(s)	189, 546, 627, 1353
EciI	GGCGGA	1 cut(s)	1449
Eco130I	CCWWGG	4 cut(s)	391, 654, 827, 1914
Eco31I	GGTCTC	3 cut(s)	101, 956, 2066
Eco32I	GATATC	1 cut(s)	1491
Eco47I	GGWCC	5 cut(s)	434, 521, 533, 587, 886
Eco57I	CTGAAG	2 cut(s)	51, 1164
Eco88I	CYCGRG	1 cut(s)	1270
EcoNI	CCTNNNNNAGG	1 cut(s)	267
EcoO109I	RGGNCCY	1 cut(s)	587
EcoRII	CCWGG	6 cut(s)	367, 454, 713, 872, 1123, 1140
EcoRV	GATATC	1 cut(s)	1491
EcoT14I	CCWWGG	4 cut(s)	391, 654, 827, 1914
ErhI	CCWWGG	4 cut(s)	391, 654, 827, 1914
FaqI	GGGAC	2 cut(s)	1600, 1690
FauI	CCCGC	2 cut(s)	310, 1697
FbaI	TGATCA	4 cut(s)	166, 1255, 1411, 1537
FblI	GTMKAC	3 cut(s)	201, 822, 1097
Fnu4HI	GCNGC	4 cut(s)	599, 1147, 1596, 1949
FokI	GGATG	2 cut(s)	191, 671
Fsp4HI	GCNGC	4 cut(s)	599, 1147, 1596, 1949
FspBI	CTAG	6 cut(s)	312, 894, 1734, 1902, 1908, 2067
GlaI	GCGC	3 cut(s)	921, 1251, 2099
GluI	GCNGC	4 cut(s)	599, 1147, 1596, 1949
GsaI	CCCAGC	2 cut(s)	1296, 1523
GsuI	CTGGAG	1 cut(s)	741
HaeIII	GGCC	7 cut(s)	126, 135, 150, 390, 929, 1810, 1912
HgaI	GACGC	2 cut(s)	808, 1500
HhaI	GCGC	3 cut(s)	922, 1252, 2100
Hin1I	GRCGYC	1 cut(s)	819
Hin6I	GCGC	3 cut(s)	920, 1250, 2098
HinP1I	GCGC	3 cut(s)	920, 1250, 2098
HincII	GTYRAC	2 cut(s)	664, 823
HindII	GTYRAC	2 cut(s)	664, 823
HindIII	AAGCTT	2 cut(s)	939, 1694
HinfI	GANTC	4 cut(s)	236, 1931, 2003, 2135
HphI	GGTGA	9 cut(s)	47, 91, 307, 451, 1064, 1302, 1498, 1936, 1954
Hpy166II	GTNNAC	6 cut(s)	202, 224, 434, 664, 823, 1098
Hpy188I	TCNGA	5 cut(s)	711, 1317, 1352, 1376, 1416
Hpy188III	TCNNGA	9 cut(s)	161, 170, 176, 405, 758, 998, 1259, 1272, 1426
Hpy8I	GTNNAC	6 cut(s)	202, 224, 434, 664, 823, 1098
Hpy99I	CGWCG	2 cut(s)	824, 2055
HpyCH4III	ACNGT	3 cut(s)	1630, 1714, 2039
HpyCH4IV	ACGT	1 cut(s)	2050
HpyCH4V	TGCA	7 cut(s)	224, 268, 398, 797, 1217, 1546, 1579
HpyF3I	CTNAG	3 cut(s)	1446, 1805, 1836
HpySE526I	ACGT	1 cut(s)	2050
Hsp92I	GRCGYC	1 cut(s)	819
HspAI	GCGC	3 cut(s)	920, 1250, 2098
KpnI	GGTACC	1 cut(s)	2082
Ksp22I	TGATCA	4 cut(s)	166, 1255, 1411, 1537
LguI	GCTCTTC	1 cut(s)	546
LmnI	GCTCC	4 cut(s)	265, 500, 689, 2116
Lsp1109I	GCAGC	3 cut(s)	1158, 1607, 1960
LweI	GCATC	2 cut(s)	247, 2007
MaeI	CTAG	6 cut(s)	312, 894, 1734, 1902, 1908, 2067
MaeII	ACGT	1 cut(s)	2050
MaeIII	GTNAC	5 cut(s)	970, 1009, 1282, 1561, 1924
MbiI	CCGCTC	1 cut(s)	317
MflI	RGATCY	2 cut(s)	487, 1466
MhlI	GDGCHC	3 cut(s)	226, 1831, 2121
MlsI	TGGCCA	2 cut(s)	126, 929
MluNI	TGGCCA	2 cut(s)	126, 929
MlyI	GAGTC	3 cut(s)	230, 1940, 1997
MmeI	TCCRAC	1 cut(s)	548
Mox20I	TGGCCA	2 cut(s)	126, 929
MscI	TGGCCA	2 cut(s)	126, 929
MseI	TTAA	5 cut(s)	101, 543, 1749, 1878, 1998
MslI	CAYNNNNRTG	3 cut(s)	24, 135, 1053
Msp20I	TGGCCA	2 cut(s)	126, 929
MspA1I	CMGCKG	1 cut(s)	1598
MspCI	CTTAAG	1 cut(s)	542
Mva1269I	GAATGC	1 cut(s)	1219
MvaI	CCWGG	6 cut(s)	369, 456, 715, 874, 1125, 1142
MvnI	CGCG	2 cut(s)	1250, 2100
NciI	CCSGG	6 cut(s)	688, 847, 1669, 1812, 1872, 2083
NcoI	CCATGG	2 cut(s)	391, 654
NlaIV	GGNNCC	4 cut(s)	685, 1081, 1381, 2080
NmeAIII	GCCGAG	1 cut(s)	218
NmuCI	GTSAC	2 cut(s)	970, 1924
PaeR7I	CTCGAG	1 cut(s)	1270
PagI	TCATGA	2 cut(s)	169, 1258
PciSI	GCTCTTC	1 cut(s)	546
PctI	GAATGC	1 cut(s)	1219
PfeI	GAWTC	1 cut(s)	2135
PflFI	GACNNNGTC	1 cut(s)	1930
PflMI	CCANNNNNTGG	1 cut(s)	530
PfoI	TCCNGGA	1 cut(s)	1123
PinAI	ACCGGT	1 cut(s)	436
PkrI	GCNGC	4 cut(s)	600, 1148, 1597, 1950
PleI	GAGTC	3 cut(s)	230, 1939, 1997
PpsI	GAGTC	3 cut(s)	230, 1939, 1997
PpuMI	RGGWCCY	1 cut(s)	587
PshAI	GACNNNNGTC	2 cut(s)	716, 968
PsiI	TTATAA	1 cut(s)	1844
Psp5II	RGGWCCY	1 cut(s)	587
Psp6I	CCWGG	6 cut(s)	367, 454, 713, 872, 1123, 1140
PspFI	CCCAGC	2 cut(s)	1292, 1519
PspGI	CCWGG	6 cut(s)	367, 454, 713, 872, 1123, 1140
PspN4I	GGNNCC	4 cut(s)	685, 1081, 1381, 2080
PspPI	GGNCC	7 cut(s)	434, 521, 533, 587, 886, 1809, 1911
PspPPI	RGGWCCY	1 cut(s)	587
PstNI	CAGNNNCTG	1 cut(s)	1679
PsuI	RGATCY	2 cut(s)	487, 1466
PsyI	GACNNNGTC	1 cut(s)	1930
RseI	CAYNNNNRTG	3 cut(s)	24, 135, 1053
SalI	GTCGAC	1 cut(s)	821
SapI	GCTCTTC	1 cut(s)	546
SaqAI	TTAA	5 cut(s)	101, 543, 1749, 1878, 1998
SatI	GCNGC	4 cut(s)	599, 1147, 1596, 1949
Sau96I	GGNCC	7 cut(s)	434, 521, 533, 587, 886, 1809, 1911
ScaI	AGTACT	4 cut(s)	1326, 1711, 1720, 1738
SchI	GAGTC	3 cut(s)	230, 1940, 1997
SduI	GDGCHC	3 cut(s)	226, 1831, 2121
SfaNI	GCATC	2 cut(s)	247, 2007
SfcI	CTRYAG	4 cut(s)	339, 474, 1626, 2129
SfiI	GGCCNNNNNGGCC	1 cut(s)	132
Sfr274I	CTCGAG	1 cut(s)	1270
SinI	GGWCC	5 cut(s)	434, 521, 533, 587, 886
SlaI	CTCGAG	1 cut(s)	1270
SmiMI	CAYNNNNRTG	3 cut(s)	24, 135, 1053
SmlI	CTYRAG	3 cut(s)	542, 902, 1270
SmoI	CTYRAG	3 cut(s)	542, 902, 1270
SpeI	ACTAGT	1 cut(s)	1733
SsiI	CCGC	8 cut(s)	317, 599, 1434, 1494, 1598, 1634, 1704, 2100
SspMI	CTAG	6 cut(s)	312, 894, 1734, 1902, 1908, 2067
StyI	CCWWGG	4 cut(s)	391, 654, 827, 1914
TaaI	ACNGT	3 cut(s)	1630, 1714, 2039
TaiI	ACGT	1 cut(s)	2053
TaqI	TCGA	5 cut(s)	466, 822, 1032, 1271, 2015
TaqII	GACCGA	3 cut(s)	681, 903, 1740
TatI	WGTACW	6 cut(s)	16, 809, 1324, 1709, 1718, 1736
TauI	GCSGC	1 cut(s)	601
TfiI	GAWTC	1 cut(s)	2135
Tru1I	TTAA	5 cut(s)	101, 543, 1749, 1878, 1998
Tru9I	TTAA	5 cut(s)	101, 543, 1749, 1878, 1998
TscAI	CASTG	3 cut(s)	979, 1162, 2044
TseFI	GTSAC	2 cut(s)	970, 1924
TseI	GCWGC	3 cut(s)	1146, 1595, 1948
Tsp45I	GTSAC	2 cut(s)	970, 1924
TspGWI	ACGGA	1 cut(s)	1943
TspRI	CASTG	3 cut(s)	979, 1162, 2044
Tth111I	GACNNNGTC	1 cut(s)	1930
Van91I	CCANNNNNTGG	1 cut(s)	530
Vha464I	CTTAAG	1 cut(s)	542
VneI	GTGCAC	1 cut(s)	222
VpaK11BI	GGWCC	5 cut(s)	434, 521, 533, 587, 886
XagI	CCTNNNNNAGG	1 cut(s)	267
XapI	RAATTY	3 cut(s)	298, 1200, 1978
XcmI	CCANNNNNNNNNTGG	3 cut(s)	721, 880, 1121
XhoI	CTCGAG	1 cut(s)	1270
XmiI	GTMKAC	3 cut(s)	201, 822, 1097
XspI	CTAG	6 cut(s)	312, 894, 1734, 1902, 1908, 2067
ZrmI	AGTACT	4 cut(s)	1326, 1711, 1720, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.