Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g05081 |
| malus_domestica | MD10G1101700.v1.1 |
| pyrus_communis | pycom09g04910 pycom15g38900 |
| rosa_chinensis | RchiOBHm_Chr2g0123831 RchiOBHm_Chr4g0385181 RchiOBHm_Chr5g0064611 |
| rosa_laevigata | RLG00000008165 RLG00000018415 RLG00000019614 |
| rosa_multiflora | Rmu_sc0000571.1_g000023 Rmu_sc0001609.1_g000009 Rmu_sc0002893.1_g000021 Rmu_sc0003314.1_g000036 Rmu_sc0004010.1_g000014 Rmu_sc0008955.1_g000004 Rmu_sc0026245.1_g000002 Rmu_sc0027612.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00379810 Rroxscaffold_7G00189080 |
| rosa_rugosa | Rorug03G0223000 Rorug06G0045100 |
| rosa_samantha | Rh1CG355700 Rh1DG373200 Rh2BG315600 Rh3BG307100 Rh3CG368600 Rh3DG369600 Rh6BG404300 Rh6DG233700 Rh6DG396800 Rh6DG396900 Rh7AG211300 Rh7CG234500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 398 |
| Acc36I | ACCTGC | 2 cut(s) | 119, 398 |
| AccI | GTMKAC | 1 cut(s) | 137 |
| AcuI | CTGAAG | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 156 |
| AgsI | TTSAA | 1 cut(s) | 94 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 365, 397 |
| AluBI | AGCT | 2 cut(s) | 88, 100 |
| AluI | AGCT | 2 cut(s) | 88, 100 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 229, 261 |
| AspLEI | GCGC | 1 cut(s) | 187 |
| AsuHPI | GGTGA | 2 cut(s) | 59, 422 |
| BbsI | GAAGAC | 1 cut(s) | 384 |
| BbvCI | CCTCAGC | 2 cut(s) | 101, 188 |
| BccI | CCATC | 3 cut(s) | 61, 169, 199 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 107, 141 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfoI | RGCGCY | 1 cut(s) | 188 |
| BfuAI | ACCTGC | 2 cut(s) | 119, 398 |
| BmsI | GCATC | 1 cut(s) | 67 |
| BpiI | GAAGAC | 1 cut(s) | 384 |
| Bpu10I | CCTNAGC | 3 cut(s) | 57, 101, 188 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 97, 127, 205, 235 |
| BseMII | CTCAG | 5 cut(s) | 54, 71, 92, 179, 320 |
| BseRI | GAGGAG | 5 cut(s) | 118, 194, 226, 298, 401 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| BspCNI | CTCAG | 5 cut(s) | 55, 70, 93, 180, 321 |
| BspHI | TCATGA | 1 cut(s) | 364 |
| BspMI | ACCTGC | 2 cut(s) | 119, 398 |
| BssNAI | GTATAC | 1 cut(s) | 138 |
| Bst1107I | GTATAC | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 3 cut(s) | 14, 164, 429 |
| BstDEI | CTNAG | 5 cut(s) | 57, 63, 101, 188, 329 |
| BstH2I | RGCGCY | 1 cut(s) | 188 |
| BstHHI | GCGC | 1 cut(s) | 187 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstNSI | RCATGY | 1 cut(s) | 431 |
| BstV2I | GAAGAC | 1 cut(s) | 384 |
| BstZ17I | GTATAC | 1 cut(s) | 138 |
| BveI | ACCTGC | 2 cut(s) | 119, 398 |
| Cac8I | GCNNGC | 3 cut(s) | 14, 164, 429 |
| CciI | TCATGA | 1 cut(s) | 364 |
| CfoI | GCGC | 1 cut(s) | 187 |
| CseI | GACGC | 1 cut(s) | 18 |
| Csp6I | GTAC | 1 cut(s) | 155 |
| CviAII | CATG | 2 cut(s) | 365, 428 |
| CviJI | RGCY | 4 cut(s) | 62, 88, 100, 362 |
| CviKI_1 | RGCY | 4 cut(s) | 62, 88, 100, 362 |
| CviQI | GTAC | 1 cut(s) | 155 |
| DdeI | CTNAG | 5 cut(s) | 57, 63, 101, 188, 329 |
| Eco57I | CTGAAG | 1 cut(s) | 134 |
| FaeI | CATG | 2 cut(s) | 368, 431 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 365, 397 |
| FatI | CATG | 2 cut(s) | 364, 427 |
| FblI | GTMKAC | 1 cut(s) | 137 |
| GlaI | GCGC | 1 cut(s) | 186 |
| HaeII | RGCGCY | 1 cut(s) | 188 |
| HgaI | GACGC | 1 cut(s) | 18 |
| HhaI | GCGC | 1 cut(s) | 187 |
| Hin1II | CATG | 2 cut(s) | 368, 431 |
| Hin6I | GCGC | 1 cut(s) | 185 |
| HinP1I | GCGC | 1 cut(s) | 185 |
| HinfI | GANTC | 2 cut(s) | 119, 331 |
| HphI | GGTGA | 2 cut(s) | 59, 422 |
| Hpy166II | GTNNAC | 2 cut(s) | 138, 324 |
| Hpy188III | TCNNGA | 2 cut(s) | 6, 365 |
| Hpy8I | GTNNAC | 2 cut(s) | 138, 324 |
| Hpy99I | CGWCG | 1 cut(s) | 12 |
| HpyAV | CCTTC | 3 cut(s) | 88, 103, 367 |
| HpyCH4V | TGCA | 3 cut(s) | 128, 349, 427 |
| HpyF3I | CTNAG | 5 cut(s) | 57, 63, 101, 188, 329 |
| Hsp92II | CATG | 2 cut(s) | 368, 431 |
| HspAI | GCGC | 1 cut(s) | 185 |
| LmnI | GCTCC | 1 cut(s) | 97 |
| LpnPI | CCDG | 6 cut(s) | 44, 114, 137, 148, 152, 393 |
| LweI | GCATC | 1 cut(s) | 67 |
| MaeIII | GTNAC | 1 cut(s) | 235 |
| MboII | GAAGA | 5 cut(s) | 184, 286, 382, 389, 428 |
| MluCI | AATT | 3 cut(s) | 37, 351, 396 |
| MlyI | GAGTC | 2 cut(s) | 128, 340 |
| NlaIII | CATG | 2 cut(s) | 368, 431 |
| NmuCI | GTSAC | 1 cut(s) | 235 |
| NspI | RCATGY | 1 cut(s) | 431 |
| PaeI | GCATGC | 1 cut(s) | 431 |
| PagI | TCATGA | 1 cut(s) | 364 |
| PaqCI | CACCTGC | 1 cut(s) | 398 |
| PleI | GAGTC | 2 cut(s) | 127, 339 |
| PpsI | GAGTC | 2 cut(s) | 127, 339 |
| RsaI | GTAC | 1 cut(s) | 156 |
| RsaNI | GTAC | 1 cut(s) | 155 |
| SchI | GAGTC | 2 cut(s) | 128, 340 |
| SetI | ASST | 6 cut(s) | 90, 102, 133, 156, 228, 412 |
| SfaNI | GCATC | 1 cut(s) | 67 |
| SphI | GCATGC | 1 cut(s) | 431 |
| Sse9I | AATT | 3 cut(s) | 37, 351, 396 |
| TaqI | TCGA | 1 cut(s) | 7 |
| TasI | AATT | 3 cut(s) | 37, 351, 396 |
| TseFI | GTSAC | 1 cut(s) | 235 |
| Tsp45I | GTSAC | 1 cut(s) | 235 |
| XceI | RCATGY | 1 cut(s) | 431 |
| XmiI | GTMKAC | 1 cut(s) | 137 |