Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g05081 |
| malus_domestica | MD10G1101700.v1.1 |
| pyrus_communis | pycom09g04910 pycom15g38900 |
| rosa_chinensis | RchiOBHm_Chr2g0123831 RchiOBHm_Chr4g0385181 RchiOBHm_Chr5g0064611 |
| rosa_laevigata | RLG00000008165 RLG00000018415 RLG00000019614 |
| rosa_multiflora | Rmu_sc0000571.1_g000023 Rmu_sc0001609.1_g000009 Rmu_sc0002893.1_g000021 Rmu_sc0003314.1_g000036 Rmu_sc0004010.1_g000014 Rmu_sc0008955.1_g000004 Rmu_sc0026245.1_g000002 Rmu_sc0027612.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00379810 Rroxscaffold_7G00189080 |
| rosa_rugosa | Rorug03G0223000 Rorug06G0045100 |
| rosa_samantha | Rh1CG355700 Rh1DG373200 Rh2BG315600 Rh3BG307100 Rh3CG368600 Rh3DG369600 Rh6BG404300 Rh6DG233700 Rh6DG396800 Rh6DG396900 Rh7AG211300 Rh7CG234500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 18 |
| AfaI | GTAC | 1 cut(s) | 12 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 224, 256 |
| BccI | CCATC | 3 cut(s) | 25, 55, 254 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 61, 91 |
| BseRI | GAGGAG | 3 cut(s) | 50, 82, 260 |
| BspACI | CCGC | 1 cut(s) | 18 |
| BspHI | TCATGA | 1 cut(s) | 223 |
| BstC8I | GCNNGC | 2 cut(s) | 20, 288 |
| BstNSI | RCATGY | 1 cut(s) | 290 |
| BtgZI | GCGATG | 1 cut(s) | 56 |
| Cac8I | GCNNGC | 2 cut(s) | 20, 288 |
| CciI | TCATGA | 1 cut(s) | 223 |
| Csp6I | GTAC | 1 cut(s) | 11 |
| CviAII | CATG | 2 cut(s) | 224, 287 |
| CviJI | RGCY | 2 cut(s) | 221, 240 |
| CviKI_1 | RGCY | 2 cut(s) | 221, 240 |
| CviQI | GTAC | 1 cut(s) | 11 |
| FaeI | CATG | 2 cut(s) | 227, 290 |
| FaiI | YATR | 7 cut(s) | 99, 150, 167, 215, 225, 254, 288 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 224, 256 |
| FatI | CATG | 2 cut(s) | 223, 286 |
| FauI | CCCGC | 1 cut(s) | 11 |
| Hin1II | CATG | 2 cut(s) | 227, 290 |
| HinfI | GANTC | 1 cut(s) | 4 |
| Hpy166II | GTNNAC | 1 cut(s) | 183 |
| Hpy188I | TCNGA | 1 cut(s) | 195 |
| Hpy188III | TCNNGA | 1 cut(s) | 224 |
| Hpy8I | GTNNAC | 1 cut(s) | 183 |
| HpyAV | CCTTC | 2 cut(s) | 226, 230 |
| HpyCH4V | TGCA | 3 cut(s) | 140, 208, 286 |
| Hsp92II | CATG | 2 cut(s) | 227, 290 |
| LpnPI | CCDG | 1 cut(s) | 8 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MboII | GAAGA | 4 cut(s) | 40, 145, 241, 287 |
| MluCI | AATT | 1 cut(s) | 255 |
| MnlI | CCTC | 7 cut(s) | 28, 31, 39, 60, 73, 238, 265 |
| NlaIII | CATG | 2 cut(s) | 227, 290 |
| NmuCI | GTSAC | 1 cut(s) | 91 |
| NspI | RCATGY | 1 cut(s) | 290 |
| PaeI | GCATGC | 1 cut(s) | 290 |
| PagI | TCATGA | 1 cut(s) | 223 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| RsaI | GTAC | 1 cut(s) | 12 |
| RsaNI | GTAC | 1 cut(s) | 11 |
| SetI | ASST | 2 cut(s) | 12, 84 |
| SgeI | CNNG | 8 cut(s) | 20, 31, 35, 153, 201, 217, 236, 253 |
| SphI | GCATGC | 1 cut(s) | 290 |
| Sse9I | AATT | 1 cut(s) | 255 |
| SsiI | CCGC | 1 cut(s) | 18 |
| TasI | AATT | 1 cut(s) | 255 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| TseFI | GTSAC | 1 cut(s) | 91 |
| Tsp45I | GTSAC | 1 cut(s) | 91 |
| XceI | RCATGY | 1 cut(s) | 290 |