Rmu_sc0002938.1_g000003

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002938.1
OG0008889
Physical Location & Seq
Reverse (-)
15936 .. 18915
2980 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2799 bp
atgtttcatcaaaaatttgaccaagctattaaagtgctagacaaactgcatttttttgacgtaaccagtgtctcgtactttaccattggcaggtttgagtcgaagtttattcatgggattgttgaagagatttggaaacgagtacatcttacctatttgcatgtggcggattatccggtaggaatagagtctcgtatacgtgatatggataggcttgtaggtgttggaggggatgatattcgtatggtcgggatatgggggcctggtggaataggtaaaacaacaattgccaaagctgtttataattcaattattcacaagttcgaatgtagctgcttcctggaaaatattagagaaagatcagcgcaatatggaggcctcgtgaaactacaaagattttttctttcccacatcctaatgggaaaagaaatcaaattagccacttgcaatgaaggaatgacagttataaaggaaagattaagccacaaatgggttctgttagttcttgatgatgtgaatgacttggaacagttaagaatattagctggaggatctcagtggtttggtttaggaagcagggttattattacaacaagagataagcatttattaattgctcatcacgtcaatctaatatacaaggtcaaaaaattggatcatcatgaagcttttgagctcttcagttacaattgcttcccaaagaaggaactttcaaatgagtctgcgaaactggcaattgatgcagtacagtacgcccagggccttccattagctcttgtagctttaggctcagttctttgtggtagatctatagaggagtggaaagaagcgagagatggtaattggcaatttggtatcacaggtctgtatgacactcttaaaataagtattgatgcattggaacatcaggttagagaagttttccttgacatcgcatgtttctttagaggtgaaaataacaatcatgtgatacagttacttaaagggggtggcatcaatcctaacatcagtcttagtatcctccaagaaaaggcggtgataagtattaatgaagaaagccatatctggatgcacaacttggtggaggtaatgggaaaaagaatagttcacattgagtccccaaatgaaccctgcaaacgcagtagattgtggtcttctgatgatgtttacgatgtattaactaaaggcaaaggaacaaacaaagtcaaaggtatcatggtaaagttgcctgaaccagatgagatagtattgagtgctgcaagcttttcacggatgaaaaatcttaaatacttcataaactgtaatgcatctttttcgggaaacattgattatctccctgatgagttgaggctaattgattggcctgcatttcctttcgaatctttaccaatcaattttattccgaggaagcttgttaaactcagtatgcctcgcagctgcatgtcacaactgggggagagattcaagcactccaaaactctgaaatatataaatctggaaagctgcccattcttgacagaaatcccgaacttgtctggatttccaaatttaaggcacttgaatttgagcaactgtacggctttagttgagcttgatgattctattggattccttaataagcttgtgtttttaagtctatcaggatgccgtaatattactaagtttccaagaagaatcgccttgaaatctgcaaaacatattactcttagaggttgcagaatgcttgagtctttccccgcaattgtaaaaaggatggagtgcttgacaagcttagatctatccggcactgccatcaaagaattgccttcacaaattgcatctctgattagccttgaagagttaactataagagaatgtgacaaccttactactcttccatgcagcatatatgatttgcagaatttggggtctcttgatctccaaggctgctcaaaacttgttacgtttccaaaatggtgtgcaaaatcagtcccaacatacttgaacatttcacatgacttgacttatctaaatctacgtggctgcaggatgcttgaggaaattcctgaacttccaccaaaagtgaaatgggtaaatgcagctgattgcttattgttggaacgatttacgaaattatcaaacatcttggaacatagagagtcgcaaatgatcaaatgtgtttcactgttgaattgtcagagactgtgtggaagtctggccaacaaaatggaagagattgaagatactttactgaatgaggtcactctctgctctctgtttctctcatgcaagcaatctgaattcaacgttgtttttccaggagctgaagttccaaagtggttcaaccattggaagtacttgagtaatctagttgatacatctgaattttcttttgaaatccctctcaatttcaaattgggggacaaaggattggctatatgtgcagtggctacttctgtagatgatcttggtcattgcgctttcacagccagaattagcattcaggaagaaagtagtattacacgttcgtttagttttgaagcaaaagaaatggtctcagctcatgtgtggctgctctatattccattggttaactttgctcatcgtcaatccttgccttttacctgtcgagttactttggaacatactagccaaggttcagcgcgctgtaaaagctatggggtgcacctagtaatgcctcaaggtgaatatgatgactacatggaagatgactactccgtctgctcatctagtgaagatgataagagtaatatttcagatcggaaaaagaaaaaagaaaagatgaagaaacggaaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

932

Amino Acids

105.86

Weight (kDa)

7.97

Isoelectric Point (pI)

45.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 77 - 235 5.2e-17 NB-ARC domain
WHD_ROQ1 PF23282 304 - 370 6.8e-15 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 563 - 647 9.2e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 591 - 646 6.3e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 303, 467
AasI GACNNNNNNGTC 1 cut(s) 2717
Acc36I ACCTGC 1 cut(s) 81
AccI GTMKAC 1 cut(s) 196
AccII CGCG 1 cut(s) 2644
AciI CCGC 3 cut(s) 167, 1034, 1737
AclI AACGTT 1 cut(s) 2286
AclWI GGATC 2 cut(s) 559, 663
AcoI YGGCCR 1 cut(s) 2196
AcsI RAATTY 7 cut(s) 14, 1546, 1561, 1900, 2040, 2279, 2363
AcuI CTGAAG 2 cut(s) 664, 2325
AfaI GTAC 6 cut(s) 77, 144, 747, 752, 1576, 2336
AfiI CCNNNNNNNGG 4 cut(s) 90, 490, 703, 1030
AflIII ACRYGT 1 cut(s) 2501
AjiI CACGTC 1 cut(s) 625
AjnI CCWGG 4 cut(s) 262, 339, 756, 2296
AloI GAACNNNNNNTCC 2 cut(s) 2292, 2324
Alw21I GWGCWC 2 cut(s) 678, 2667
Alw26I GTCTC 5 cut(s) 76, 195, 1914, 2173, 2539
Alw44I GTGCAC 1 cut(s) 2663
AlwI GGATC 2 cut(s) 559, 663
AlwNI CAGNNNCTG 2 cut(s) 2182, 2303
AoxI GGCC 5 cut(s) 260, 376, 760, 1361, 2196
ApaLI GTGCAC 1 cut(s) 2663
ApoI RAATTY 7 cut(s) 14, 1546, 1561, 1900, 2040, 2279, 2363
AseI ATTAAT 2 cut(s) 611, 1047
AspLEI GCGC 4 cut(s) 367, 2459, 2644, 2646
AspS9I GGNCC 2 cut(s) 260, 760
AsuHPI GGTGA 3 cut(s) 962, 1048, 2696
AsuII TTCGAA 2 cut(s) 324, 1377
BaeGI GKGCMC 1 cut(s) 2667
BalI TGGCCA 1 cut(s) 2198
BanII GRGCYC 1 cut(s) 678
BarI GAAGNNNNNNTAC 2 cut(s) 2211, 2243
BauI CACGAG 1 cut(s) 380
BbsI GAAGAC 1 cut(s) 1146
Bbv12I GWGCWC 2 cut(s) 678, 2667
BccI CCATC 3 cut(s) 830, 1747, 1799
BceAI ACGGC 2 cut(s) 1593, 1632
BcgI CGANNNNNNTGC 2 cut(s) 1296, 1330
BciT130I CCWGG 4 cut(s) 264, 341, 758, 2298
BciVI GTATCC 1 cut(s) 1028
BclI TGATCA 1 cut(s) 2148
BcoDI GTCTC 5 cut(s) 76, 195, 1914, 2173, 2539
BfaI CTAG 5 cut(s) 38, 2348, 2628, 2669, 2730
BfmI CTRYAG 3 cut(s) 810, 2023, 2436
BfuAI ACCTGC 1 cut(s) 81
BfuI GTATCC 1 cut(s) 1028
BglII AGATCT 2 cut(s) 806, 1774
BmcAI AGTACT 1 cut(s) 2336
Bme1390I CCNGG 4 cut(s) 264, 341, 758, 2298
BmgBI CACGTC 1 cut(s) 625
BmgT120I GGNCC 2 cut(s) 260, 760
BmiI GGNNCC 1 cut(s) 261
BmrFI CCNGG 4 cut(s) 264, 341, 758, 2298
BmrI ACTGGG 1 cut(s) 1460
BmsI GCATC 8 cut(s) 730, 883, 1002, 1059, 1316, 1634, 1826, 2019
BmuI ACTGGG 1 cut(s) 1460
BpiI GAAGAC 1 cut(s) 1146
BpmI CTGGAG 1 cut(s) 567
Bpu14I TTCGAA 2 cut(s) 324, 1377
BpuEI CTTGAG 4 cut(s) 1745, 2054, 2359, 2664
BsaAI YACGTR 2 cut(s) 200, 2018
BsaI GGTCTC 2 cut(s) 1914, 2539
BsaJI CCNNGG 5 cut(s) 756, 757, 1403, 1921, 2632
BsaWI WCCGGW 1 cut(s) 175
BsaXI ACNNNNNCTCC 4 cut(s) 366, 396, 2292, 2322
Bsc4I CCNNNNNNNGG 4 cut(s) 90, 490, 703, 1030
Bse1I ACTGG 3 cut(s) 66, 735, 1455
Bse3DI GCAATG 2 cut(s) 454, 2452
BseBI CCWGG 4 cut(s) 264, 341, 758, 2298
BseDI CCNNGG 5 cut(s) 756, 757, 1403, 1921, 2632
BseGI GGATG 7 cut(s) 238, 411, 1074, 1278, 1649, 1758, 2034
BseLI CCNNNNNNNGG 4 cut(s) 90, 490, 703, 1030
BseMI GCAATG 2 cut(s) 454, 2452
BseMII CTCAG 4 cut(s) 569, 804, 1435, 2550
BseNI ACTGG 3 cut(s) 66, 735, 1455
BsePI GCGCGC 1 cut(s) 2642
BseRI GAGGAG 1 cut(s) 830
BseSI GKGCMC 1 cut(s) 2667
BsgI GTGCAG 1 cut(s) 2442
Bsh1236I CGCG 1 cut(s) 2644
BshFI GGCC 5 cut(s) 262, 378, 762, 1363, 2198
BsiHKAI GWGCWC 2 cut(s) 678, 2667
BsiSI CCGG 2 cut(s) 176, 1782
BslFI GGGAC 3 cut(s) 1102, 1955, 2414
BslI CCNNNNNNNGG 4 cut(s) 90, 490, 703, 1030
BsmAI GTCTC 5 cut(s) 76, 195, 1914, 2173, 2539
BsmFI GGGAC 3 cut(s) 1102, 1955, 2414
BsmI GAATGC 2 cut(s) 1725, 2478
BsnI GGCC 5 cut(s) 262, 378, 762, 1363, 2198
Bso31I GGTCTC 2 cut(s) 1914, 2539
Bsp119I TTCGAA 2 cut(s) 324, 1377
Bsp1286I GDGCHC 2 cut(s) 678, 2667
Bsp143I GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
BspACI CCGC 3 cut(s) 167, 1034, 1737
BspANI GGCC 5 cut(s) 262, 378, 762, 1363, 2198
BspCNI CTCAG 4 cut(s) 568, 803, 1434, 2549
BspFNI CGCG 1 cut(s) 2644
BspHI TCATGA 1 cut(s) 661
BspLI GGNNCC 1 cut(s) 261
BspMAI CTGCAG 1 cut(s) 2027
BspMI ACCTGC 1 cut(s) 81
BspPI GGATC 2 cut(s) 559, 663
BspQI GCTCTTC 1 cut(s) 683
BspT104I TTCGAA 2 cut(s) 324, 1377
BspTNI GGTCTC 2 cut(s) 1914, 2539
BsrDI GCAATG 2 cut(s) 454, 2452
BsrI ACTGG 3 cut(s) 66, 735, 1455
BssECI CCNNGG 5 cut(s) 756, 757, 1403, 1921, 2632
BssHII GCGCGC 1 cut(s) 2642
BssMI GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
BssNAI GTATAC 1 cut(s) 197
BssSI CACGAG 1 cut(s) 380
BssT1I CCWWGG 2 cut(s) 1921, 2632
Bst1107I GTATAC 1 cut(s) 197
Bst2BI CACGAG 1 cut(s) 380
Bst2UI CCWGG 4 cut(s) 264, 341, 758, 2298
Bst4CI ACNGT 8 cut(s) 463, 531, 750, 975, 1301, 1574, 2166, 2184
Bst6I CTCTTC 5 cut(s) 120, 683, 1830, 1878, 2205
BstAPI GCANNNNNTGC 1 cut(s) 740
BstBAI YACGTR 2 cut(s) 200, 2018
BstBI TTCGAA 2 cut(s) 324, 1377
BstC8I GCNNGC 4 cut(s) 1261, 1365, 2270, 2644
BstDEI CTNAG 8 cut(s) 555, 790, 1013, 1421, 1659, 1706, 1771, 2536
BstF5I GGATG 7 cut(s) 238, 411, 1074, 1278, 1649, 1758, 2034
BstFNI CGCG 1 cut(s) 2644
BstHHI GCGC 4 cut(s) 367, 2459, 2644, 2646
BstKTI GATC 9 cut(s) 362, 554, 658, 809, 1777, 1918, 2151, 2446, 2761
BstMAI GTCTC 5 cut(s) 76, 195, 1914, 2173, 2539
BstMBI GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
BstMWI GCNNNNNNNGC 7 cut(s) 731, 740, 779, 1767, 2420, 2465, 2652
BstNI CCWGG 4 cut(s) 264, 341, 758, 2298
BstNSI RCATGY 3 cut(s) 164, 939, 1444
BstSCI CCNGG 4 cut(s) 262, 339, 756, 2296
BstSFI CTRYAG 3 cut(s) 810, 2023, 2436
BstSLI GKGCMC 1 cut(s) 2667
BstUI CGCG 1 cut(s) 2644
BstV2I GAAGAC 1 cut(s) 1146
BstX2I RGATCY 3 cut(s) 551, 806, 1774
BstXI CCANNNNNNTGG 1 cut(s) 2206
BstYI RGATCY 3 cut(s) 551, 806, 1774
BstZ17I GTATAC 1 cut(s) 197
BsuI GTATCC 1 cut(s) 1028
BsuRI GGCC 5 cut(s) 262, 378, 762, 1363, 2198
BtgZI GCGATG 1 cut(s) 916
BtrI CACGTC 1 cut(s) 625
BtsCI GGATG 7 cut(s) 238, 411, 1074, 1278, 1649, 1758, 2034
BtsI GCAGTG 2 cut(s) 1785, 2430
BtsIMutI CAGTG 5 cut(s) 73, 563, 1785, 2162, 2430
BveI ACCTGC 1 cut(s) 81
Cac8I GCNNGC 4 cut(s) 1261, 1365, 2270, 2644
CaiI CAGNNNCTG 2 cut(s) 2182, 2303
CciI TCATGA 1 cut(s) 661
CfoI GCGC 4 cut(s) 367, 2459, 2644, 2646
Cfr13I GGNCC 2 cut(s) 260, 760
Csp6I GTAC 6 cut(s) 76, 143, 746, 751, 1575, 2335
CviQI GTAC 6 cut(s) 76, 143, 746, 751, 1575, 2335
DdeI CTNAG 8 cut(s) 555, 790, 1013, 1421, 1659, 1706, 1771, 2536
DpnI GATC 9 cut(s) 361, 553, 657, 808, 1776, 1917, 2150, 2445, 2760
DpnII GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
DrdI GACNNNNNNGTC 1 cut(s) 2717
DseDI GACNNNNNNGTC 1 cut(s) 2717
EaeI YGGCCR 1 cut(s) 2196
Eam1104I CTCTTC 5 cut(s) 120, 683, 1830, 1878, 2205
EarI CTCTTC 5 cut(s) 120, 683, 1830, 1878, 2205
EciI GGCGGA 1 cut(s) 182
Ecl136II GAGCTC 1 cut(s) 676
Eco130I CCWWGG 2 cut(s) 1921, 2632
Eco147I AGGCCT 1 cut(s) 378
Eco24I GRGCYC 1 cut(s) 678
Eco31I GGTCTC 2 cut(s) 1914, 2539
Eco53kI GAGCTC 1 cut(s) 676
Eco57I CTGAAG 2 cut(s) 664, 2325
EcoICRI GAGCTC 1 cut(s) 676
EcoO109I RGGNCCY 2 cut(s) 260, 760
EcoRI GAATTC 1 cut(s) 2279
EcoRII CCWGG 4 cut(s) 262, 339, 756, 2296
EcoT14I CCWWGG 2 cut(s) 1921, 2632
EcoT22I ATGCAT 2 cut(s) 898, 1309
EcoT38I GRGCYC 1 cut(s) 678
ErhI CCWWGG 2 cut(s) 1921, 2632
FalI AAGNNNNNCTT 2 cut(s) 909, 941
FaqI GGGAC 3 cut(s) 1102, 1955, 2414
FauI CCCGC 1 cut(s) 1744
FbaI TGATCA 1 cut(s) 2148
FblI GTMKAC 1 cut(s) 196
FokI GGATG 7 cut(s) 245, 398, 1081, 1285, 1656, 1765, 2041
FriOI GRGCYC 1 cut(s) 678
FspBI CTAG 5 cut(s) 38, 2348, 2628, 2669, 2730
GlaI GCGC 4 cut(s) 366, 2458, 2643, 2645
GsuI CTGGAG 1 cut(s) 567
HaeIII GGCC 5 cut(s) 262, 378, 762, 1363, 2198
HapII CCGG 2 cut(s) 176, 1782
HhaI GCGC 4 cut(s) 367, 2459, 2644, 2646
Hin6I GCGC 4 cut(s) 365, 2457, 2642, 2644
HinP1I GCGC 4 cut(s) 365, 2457, 2642, 2644
HincII GTYRAC 2 cut(s) 1842, 2572
HindII GTYRAC 2 cut(s) 1842, 2572
HindIII AAGCTT 5 cut(s) 666, 1261, 1409, 1619, 1768
HpaI GTTAAC 2 cut(s) 1842, 2572
HpaII CCGG 2 cut(s) 176, 1782
HphI GGTGA 3 cut(s) 962, 1048, 2696
Hpy166II GTNNAC 6 cut(s) 197, 1108, 1168, 1842, 2572, 2665
Hpy188I TCNGA 9 cut(s) 1159, 1404, 1482, 1824, 2178, 2278, 2362, 2758, 2763
Hpy8I GTNNAC 6 cut(s) 197, 1108, 1168, 1842, 2572, 2665
HpyAV CCTTC 4 cut(s) 446, 697, 773, 1815
HpyCH4III ACNGT 8 cut(s) 463, 531, 750, 975, 1301, 1574, 2166, 2184
HpyCH4IV ACGT 7 cut(s) 60, 199, 624, 1943, 2017, 2286, 2503
HpyF10VI GCNNNNNNNGC 7 cut(s) 731, 740, 779, 1767, 2420, 2465, 2652
HpyF3I CTNAG 8 cut(s) 555, 790, 1013, 1421, 1659, 1706, 1771, 2536
HpySE526I ACGT 7 cut(s) 60, 199, 624, 1943, 2017, 2286, 2503
HspAI GCGC 4 cut(s) 365, 2457, 2642, 2644
Ksp22I TGATCA 1 cut(s) 2148
KspAI GTTAAC 2 cut(s) 1842, 2572
Kzo9I GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
LguI GCTCTTC 1 cut(s) 683
LmnI GCTCC 1 cut(s) 2300
LweI GCATC 8 cut(s) 730, 883, 1002, 1059, 1316, 1634, 1826, 2019
MaeI CTAG 5 cut(s) 38, 2348, 2628, 2669, 2730
MaeII ACGT 7 cut(s) 60, 199, 624, 1943, 2017, 2286, 2503
MaeIII GTNAC 8 cut(s) 61, 683, 975, 1443, 1856, 1939, 2239, 2611
MalI GATC 9 cut(s) 361, 553, 657, 808, 1776, 1917, 2150, 2445, 2760
MboI GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
MfeI CAATTG 4 cut(s) 285, 688, 735, 1740
MflI RGATCY 3 cut(s) 551, 806, 1774
MhlI GDGCHC 2 cut(s) 678, 2667
MlsI TGGCCA 1 cut(s) 2198
MluNI TGGCCA 1 cut(s) 2198
MlyI GAGTC 6 cut(s) 107, 197, 728, 1124, 1736, 2147
MmeI TCCRAC 2 cut(s) 205, 2076
Mox20I TGGCCA 1 cut(s) 2198
Mph1103I ATGCAT 2 cut(s) 898, 1309
MscI TGGCCA 1 cut(s) 2198
MslI CAYNNNNRTG 1 cut(s) 416
Msp20I TGGCCA 1 cut(s) 2198
MspA1I CMGCKG 2 cut(s) 1437, 2081
MspI CCGG 2 cut(s) 176, 1782
MspR9I CCNGG 4 cut(s) 264, 341, 758, 2298
MunI CAATTG 4 cut(s) 285, 688, 735, 1740
Mva1269I GAATGC 2 cut(s) 1725, 2478
MvaI CCWGG 4 cut(s) 264, 341, 758, 2298
MvnI CGCG 1 cut(s) 2644
MwoI GCNNNNNNNGC 7 cut(s) 731, 740, 779, 1767, 2420, 2465, 2652
NdeII GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
NlaIV GGNNCC 1 cut(s) 261
NmuCI GTSAC 3 cut(s) 1443, 1856, 2239
NsiI ATGCAT 2 cut(s) 898, 1309
NspI RCATGY 3 cut(s) 164, 939, 1444
NspV TTCGAA 2 cut(s) 324, 1377
PagI TCATGA 1 cut(s) 661
PasI CCCWGGG 1 cut(s) 757
PauI GCGCGC 1 cut(s) 2642
PceI AGGCCT 1 cut(s) 378
PciSI GCTCTTC 1 cut(s) 683
PctI GAATGC 2 cut(s) 1725, 2478
PfeI GAWTC 5 cut(s) 1379, 1461, 1598, 1608, 1674
PfoI TCCNGGA 2 cut(s) 339, 2296
PleI GAGTC 6 cut(s) 106, 196, 727, 1123, 1735, 2146
PpsI GAGTC 6 cut(s) 106, 196, 727, 1123, 1735, 2146
Ppu21I YACGTR 2 cut(s) 200, 2018
PshBI ATTAAT 2 cut(s) 611, 1047
PsiI TTATAA 2 cut(s) 303, 467
Psp124BI GAGCTC 1 cut(s) 678
Psp1406I AACGTT 1 cut(s) 2286
Psp6I CCWGG 4 cut(s) 262, 339, 756, 2296
PspGI CCWGG 4 cut(s) 262, 339, 756, 2296
PspN4I GGNNCC 1 cut(s) 261
PspPI GGNCC 2 cut(s) 260, 760
PsrI GAACNNNNNNTAC 2 cut(s) 2488, 2520
PstI CTGCAG 1 cut(s) 2027
PstNI CAGNNNCTG 2 cut(s) 2182, 2303
PsuI RGATCY 3 cut(s) 551, 806, 1774
PteI GCGCGC 1 cut(s) 2642
PvuII CAGCTG 2 cut(s) 1437, 2081
RsaI GTAC 6 cut(s) 77, 144, 747, 752, 1576, 2336
RsaNI GTAC 6 cut(s) 76, 143, 746, 751, 1575, 2335
RseI CAYNNNNRTG 1 cut(s) 416
SacI GAGCTC 1 cut(s) 678
SapI GCTCTTC 1 cut(s) 683
Sau3AI GATC 9 cut(s) 359, 551, 655, 806, 1774, 1915, 2148, 2443, 2758
Sau96I GGNCC 2 cut(s) 260, 760
ScaI AGTACT 1 cut(s) 2336
SchI GAGTC 6 cut(s) 107, 197, 728, 1124, 1736, 2147
ScrFI CCNGG 4 cut(s) 264, 341, 758, 2298
SduI GDGCHC 2 cut(s) 678, 2667
SfaNI GCATC 8 cut(s) 730, 883, 1002, 1059, 1316, 1634, 1826, 2019
SfcI CTRYAG 3 cut(s) 810, 2023, 2436
SfuI TTCGAA 2 cut(s) 324, 1377
SmiMI CAYNNNNRTG 1 cut(s) 416
SmlI CTYRAG 4 cut(s) 1724, 2033, 2338, 2679
SmoI CTYRAG 4 cut(s) 1724, 2033, 2338, 2679
SseBI AGGCCT 1 cut(s) 378
SsiI CCGC 3 cut(s) 167, 1034, 1737
SspI AATATT 4 cut(s) 349, 540, 1654, 2752
SspMI CTAG 5 cut(s) 38, 2348, 2628, 2669, 2730
SstI GAGCTC 1 cut(s) 678
StuI AGGCCT 1 cut(s) 378
StyD4I CCNGG 4 cut(s) 262, 339, 756, 2296
StyI CCWWGG 2 cut(s) 1921, 2632
TaaI ACNGT 8 cut(s) 463, 531, 750, 975, 1301, 1574, 2166, 2184
TaiI ACGT 7 cut(s) 63, 202, 627, 1946, 2020, 2289, 2506
TaqI TCGA 4 cut(s) 101, 324, 1377, 2608
TatI WGTACW 3 cut(s) 142, 745, 2334
TfiI GAWTC 5 cut(s) 1379, 1461, 1598, 1608, 1674
TscAI CASTG 5 cut(s) 73, 563, 1792, 2169, 2430
TseFI GTSAC 3 cut(s) 1443, 1856, 2239
Tsp45I GTSAC 3 cut(s) 1443, 1856, 2239
TspDTI ATGAA 8 cut(s) 101, 465, 678, 1065, 1140, 1282, 1289, 2798
TspGWI ACGGA 2 cut(s) 1285, 2707
TspRI CASTG 5 cut(s) 73, 563, 1792, 2169, 2430
VneI GTGCAC 1 cut(s) 2663
VspI ATTAAT 2 cut(s) 611, 1047
XapI RAATTY 7 cut(s) 14, 1546, 1561, 1900, 2040, 2279, 2363
XceI RCATGY 3 cut(s) 164, 939, 1444
XcmI CCANNNNNNNNNTGG 1 cut(s) 2064
XmiI GTMKAC 1 cut(s) 196
XspI CTAG 5 cut(s) 38, 2348, 2628, 2669, 2730
ZrmI AGTACT 1 cut(s) 2336
Zsp2I ATGCAT 2 cut(s) 898, 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.