Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g05851 FvH4_6g24690 |
| rosa_laevigata | RLG00000023216 RLG00000023236 |
| rosa_multiflora | Rmu_co8426839.1_g000001 Rmu_sc0000295.1_g000006 Rmu_sc0000295.1_g000044 Rmu_sc0003262.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00397600 Rroxscaffold_6G00397820 |
| rosa_rugosa | Rorug03G0210500 Rorug03G0212600 |
| rosa_samantha | Rh3AG259400 Rh3BG296000 Rh3BG298200 Rh3CG293500 Rh3CG295200 Rh3DG288900 Rh3DG289400 Rh3DG291500 |
| rosa_wichuraiana | Rw3G023390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 226 |
| AcuI | CTGAAG | 1 cut(s) | 174 |
| AgsI | TTSAA | 2 cut(s) | 87, 133 |
| AluBI | AGCT | 1 cut(s) | 223 |
| AluI | AGCT | 1 cut(s) | 223 |
| Ama87I | CYCGRG | 1 cut(s) | 7 |
| Aor13HI | TCCGGA | 1 cut(s) | 226 |
| AspS9I | GGNCC | 1 cut(s) | 118 |
| AvaI | CYCGRG | 1 cut(s) | 7 |
| AvaII | GGWCC | 1 cut(s) | 118 |
| BglII | AGATCT | 1 cut(s) | 74 |
| Bme18I | GGWCC | 1 cut(s) | 118 |
| BmeT110I | CYCGRG | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 1 cut(s) | 118 |
| BmiI | GGNNCC | 1 cut(s) | 119 |
| BpuEI | CTTGAG | 1 cut(s) | 248 |
| BsaJI | CCNNGG | 1 cut(s) | 6 |
| BsaWI | WCCGGW | 1 cut(s) | 226 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 157, 187 |
| BseAI | TCCGGA | 1 cut(s) | 226 |
| BseDI | CCNNGG | 1 cut(s) | 6 |
| BseRI | GAGGAG | 2 cut(s) | 87, 129 |
| BsiHKCI | CYCGRG | 1 cut(s) | 7 |
| BsiSI | CCGG | 1 cut(s) | 227 |
| BslFI | GGGAC | 1 cut(s) | 131 |
| BsmFI | GGGAC | 1 cut(s) | 131 |
| BsoBI | CYCGRG | 1 cut(s) | 7 |
| Bsp13I | TCCGGA | 1 cut(s) | 226 |
| Bsp143I | GATC | 4 cut(s) | 31, 65, 74, 155 |
| BspEI | TCCGGA | 1 cut(s) | 226 |
| BspLI | GGNNCC | 1 cut(s) | 119 |
| BssECI | CCNNGG | 1 cut(s) | 6 |
| BssMI | GATC | 4 cut(s) | 31, 65, 74, 155 |
| Bst6I | CTCTTC | 1 cut(s) | 190 |
| BstKTI | GATC | 4 cut(s) | 34, 68, 77, 158 |
| BstMBI | GATC | 4 cut(s) | 31, 65, 74, 155 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 274 |
| BstX2I | RGATCY | 1 cut(s) | 74 |
| BstYI | RGATCY | 1 cut(s) | 74 |
| BtsIMutI | CAGTG | 2 cut(s) | 165, 198 |
| Cfr13I | GGNCC | 1 cut(s) | 118 |
| CviAII | CATG | 1 cut(s) | 209 |
| CviJI | RGCY | 3 cut(s) | 203, 223, 260 |
| CviKI_1 | RGCY | 3 cut(s) | 203, 223, 260 |
| DpnI | GATC | 4 cut(s) | 33, 67, 76, 157 |
| DpnII | GATC | 4 cut(s) | 31, 65, 74, 155 |
| Eam1104I | CTCTTC | 1 cut(s) | 190 |
| EarI | CTCTTC | 1 cut(s) | 190 |
| Eco47I | GGWCC | 1 cut(s) | 118 |
| Eco57I | CTGAAG | 1 cut(s) | 174 |
| Eco88I | CYCGRG | 1 cut(s) | 7 |
| FaeI | CATG | 1 cut(s) | 212 |
| FaiI | YATR | 1 cut(s) | 210 |
| FaqI | GGGAC | 1 cut(s) | 131 |
| FatI | CATG | 1 cut(s) | 208 |
| HapII | CCGG | 1 cut(s) | 227 |
| Hin1II | CATG | 1 cut(s) | 212 |
| HindIII | AAGCTT | 1 cut(s) | 221 |
| HinfI | GANTC | 2 cut(s) | 230, 271 |
| HpaII | CCGG | 1 cut(s) | 227 |
| Hpy166II | GTNNAC | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 5 cut(s) | 70, 79, 160, 177, 235 |
| Hpy188III | TCNNGA | 1 cut(s) | 227 |
| Hpy8I | GTNNAC | 1 cut(s) | 214 |
| HpyAV | CCTTC | 2 cut(s) | 93, 193 |
| HpyCH4V | TGCA | 1 cut(s) | 53 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 274 |
| Hsp92II | CATG | 1 cut(s) | 212 |
| Kpn2I | TCCGGA | 1 cut(s) | 226 |
| Kzo9I | GATC | 4 cut(s) | 31, 65, 74, 155 |
| LpnPI | CCDG | 2 cut(s) | 63, 240 |
| MalI | GATC | 4 cut(s) | 33, 67, 76, 157 |
| MboI | GATC | 4 cut(s) | 31, 65, 74, 155 |
| MboII | GAAGA | 3 cut(s) | 38, 177, 180 |
| MflI | RGATCY | 1 cut(s) | 74 |
| MluCI | AATT | 1 cut(s) | 250 |
| MlyI | GAGTC | 1 cut(s) | 224 |
| MnlI | CCTC | 6 cut(s) | 16, 108, 147, 150, 193, 272 |
| MroI | TCCGGA | 1 cut(s) | 226 |
| MseI | TTAA | 1 cut(s) | 15 |
| MspI | CCGG | 1 cut(s) | 227 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 274 |
| NdeII | GATC | 4 cut(s) | 31, 65, 74, 155 |
| NlaIII | CATG | 1 cut(s) | 212 |
| NlaIV | GGNNCC | 1 cut(s) | 119 |
| PfeI | GAWTC | 1 cut(s) | 271 |
| PleI | GAGTC | 1 cut(s) | 224 |
| PpsI | GAGTC | 1 cut(s) | 224 |
| PspN4I | GGNNCC | 1 cut(s) | 119 |
| PspPI | GGNCC | 1 cut(s) | 118 |
| PsuI | RGATCY | 1 cut(s) | 74 |
| SaqAI | TTAA | 1 cut(s) | 15 |
| Sau3AI | GATC | 4 cut(s) | 31, 65, 74, 155 |
| Sau96I | GGNCC | 1 cut(s) | 118 |
| SchI | GAGTC | 1 cut(s) | 224 |
| SetI | ASST | 3 cut(s) | 60, 85, 225 |
| SinI | GGWCC | 1 cut(s) | 118 |
| SmlI | CTYRAG | 1 cut(s) | 263 |
| SmoI | CTYRAG | 1 cut(s) | 263 |
| Sse9I | AATT | 1 cut(s) | 250 |
| TasI | AATT | 1 cut(s) | 250 |
| TfiI | GAWTC | 1 cut(s) | 271 |
| Tru1I | TTAA | 1 cut(s) | 15 |
| Tru9I | TTAA | 1 cut(s) | 15 |
| TscAI | CASTG | 2 cut(s) | 172, 198 |
| TspRI | CASTG | 2 cut(s) | 172, 198 |
| VpaK11BI | GGWCC | 1 cut(s) | 118 |