Rmu_sc0003838.1_g000004
TCP Family

T-complex protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003838.1
OG0005785
Physical Location & Seq
Forward (+)
29278 .. 33159
3882 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2724 bp
atgcgcttagctaagttggatgagttgcggcaagcagctaaaagtggcgtagaaatgcgttttgagaaggaacgacagaagcttggttcaaaagttgaattacgttttcagcaggcggaggcaaatagaatgcttatgctcaaggcttatagacagagaagggccaacttgaaggagaggtcatctcagtccttgttgcgaaagatggctcgggagaataagtacaaggagcgcgtgcgtgctgcaattaaccaaaaacgcgcagctgctgagaaaaagcgactggtacttttggaagaagagaagaagagggcatacgccaggacgttgcaagtgcaaagagtagcaaagtctgtctctcaccaacgtgagattgaaaggagagcgaaaagggatcagttagaagaccggttgcagagggcaaagagacaaagagcagaatatctcaagcaaagaggaaagatacagaattcatttcaagtcagttggaataggatgcacaaacaggctgatttcctgtctagaaagttagcaaggtgttggagacggttccacaggctcaagagaactacgtttgctttggcaaaagcttacaataccttgaaacttgaggaaaacagcgtcaagtcaatgccgttcgagcagcttgcaattctgattgaatcacctgatacccttcagactgggaaggctctacttgatcgacttgagaatcggttgaaagtctcgaagactgtagcctctataaactatccgtccagtattgataacattgatcaccttctcaaacgagttgcttctcccaaaaggaggaccacaccaaggacatctttgagaagcagggagggaaagaaagcctcttctgtcagggccacaaccagaacttcagctaaattaacaaggtatcaagtgagagtggttctttgcgcttacatgattttgagtcacccagatgcggttttcaatggtcaaggagagcgtgagacttctctggccaaatctgcagaagaatttgttagagagtttgagttgttggtgaagactatattacagggcccggtcaacagttctgaggaagagtctgattccacatcgcccaaacgcttaaccttcagatctcagctaggagcttttgataaagcgtggtgctcctacttgagttgctttgtggcatggaaggttaaggatgcccagttgttggagggagatttagtgagggcagcttgccagatggagctgtctatgattcaaacttgcaagatgacttcagaaggacatactgccgatctcactcatgatatgaaggctattcagaaacaggtcgcagaagaccaaaagctactgagagaaaaggtgcaacacttaagtggagacgctgggattgagcgtatgacatctgctttatctgaaacacggtccaagtattttgcagcaagggaaaatggaagtccatcagggttgcaaaccactcagtttgtttctccaagccctccaagttcatcagctggtccttctgtttctagcttagataagaagagaaatccaagtcgtgtagttcgttccctatttcaggaagatgaatctattcgtccgaaaggattagagtcaactgagattggatcgattgtgaatgagttctctaagaccaatttgagtgggcagctcggatcttcttcccaaaagccggtcactgagaatgaactgattgtgaatgagtttctccatgagcaaaaccaggcttttgctaatattttcaatgctgccgatgaagatcaaaataatgtccagtcaaagatcagaaacactatggagaaggctttctgggatggcataatggaatctgtaaaccaggaagagcccaactatgaccggatcattcaactgttggaggaggtgagggatgaaatttgcaccatggctccacagagctggaaacaagaaattgttgaagcaattgatgtggatattctctctcaggtgctaaaatctggtaacctggatattgattacctgggaaagatcctagagttttcaatggtcactttgcgaaagctctctgctcctgcgaatgatgatgaaatgatggccactctccagagtttaaggaaagaactagatgagatatgtaatgctagggaccagtccaactgctcaggtgtcattgctatgatcaagggtctgcgttttgttctagagcagattcaggtgcttaaacgtgagattagcaaagcacgtataagaataatggagcctttgttgaaggggcccactggtttgcagtaccttacaaatgcctttgccaatcgctatggacctgcctcagatgccaatacctctctaccagtgacggtgcagtggctttcatccgtgtggaattgcaaagatcaggagtggcaagaacataagattgcttcctcgactttgatgagcagtgataatttgtctcatgagtttcttccttccaccacccttagaagtggtggaagctttctgttgaaatcaaattcttcatcgctgtcttctagaaatagccaaggtaatgtacaaccggaatgcaagggagaaggagttgatttgttggtgaggctcggcttgttgaagttggtgagtggtgtttctggtctgactgaagaggccctgcctgaaacttttatgcttaacctttcaagattaagggctgtgcaggctcaaattcagaaaattattgtttcttccataaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcp11

Protein Analysis

907

Amino Acids

102.88

Weight (kDa)

9.64

Isoelectric Point (pI)

53.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcp11 PF05794 570 - 904 1.2e-57 T-complex protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2323
AccB7I CCANNNNNTGG 1 cut(s) 1198
AccII CGCG 2 cut(s) 234, 261
AciI CCGC 3 cut(s) 28, 116, 956
AclWI GGATC 5 cut(s) 402, 1627, 1675, 1880, 2014
AcoI YGGCCR 2 cut(s) 993, 2085
AcsI RAATTY 5 cut(s) 469, 1010, 1905, 2503, 2691
AcuI CTGAAG 5 cut(s) 662, 870, 1096, 1251, 2649
AfaI GTAC 4 cut(s) 224, 288, 2282, 2544
AfiI CCNNNNNNNGG 6 cut(s) 810, 822, 955, 1198, 1570, 1684
AflII CTTAAG 1 cut(s) 1363
AgeI ACCGGT 1 cut(s) 408
AjnI CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
AleI CACNNNNGTG 2 cut(s) 366, 1365
Alw21I GWGCWC 1 cut(s) 1151
Alw26I GTCTC 7 cut(s) 361, 421, 538, 730, 977, 1365, 2448
AlwI GGATC 5 cut(s) 402, 1627, 1675, 1880, 2014
AlwNI CAGNNNCTG 1 cut(s) 269
Ama87I CYCGRG 1 cut(s) 210
AoxI GGCC 7 cut(s) 162, 870, 993, 1054, 2085, 2264, 2634
ApaI GGGCCC 2 cut(s) 1058, 2268
ApeKI GCWGC 9 cut(s) 35, 242, 263, 266, 643, 1220, 1430, 1660, 1760
ApoI RAATTY 5 cut(s) 469, 1010, 1905, 2503, 2691
AsiGI ACCGGT 1 cut(s) 408
Asp700I GAANNNNTTC 3 cut(s) 1584, 1634, 1817
AspLEI GCGC 4 cut(s) 6, 234, 263, 929
AsuC2I CCSGG 1 cut(s) 1058
AsuHPI GGTGA 8 cut(s) 353, 657, 770, 938, 1048, 1906, 2593, 2617
AvaI CYCGRG 1 cut(s) 210
AvaII GGWCC 5 cut(s) 813, 1416, 1508, 2137, 2312
BaeGI GKGCMC 2 cut(s) 1058, 2268
BalI TGGCCA 2 cut(s) 995, 2087
BanII GRGCYC 3 cut(s) 1058, 1860, 2268
BarI GAAGNNNNNNTAC 2 cut(s) 299, 331
BbsI GAAGAC 5 cut(s) 411, 737, 1046, 1335, 2511
Bbv12I GWGCWC 1 cut(s) 1151
BbvI GCAGC 9 cut(s) 47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
BccI CCATC 5 cut(s) 199, 1225, 1459, 1820, 2077
BceAI ACGGC 1 cut(s) 619
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciT130I CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
BclI TGATCA 2 cut(s) 775, 2169
BcnI CCSGG 1 cut(s) 1058
BcoDI GTCTC 7 cut(s) 361, 421, 538, 730, 977, 1365, 2448
BfaI CTAG 8 cut(s) 522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
BfmI CTRYAG 2 cut(s) 735, 1002
BfrI CTTAAG 1 cut(s) 1363
BfuAI ACCTGC 1 cut(s) 2323
BglII AGATCT 1 cut(s) 1115
BlpI GCTNAGC 1 cut(s) 7
Bme1390I CCNGG 6 cut(s) 322, 1058, 1736, 1850, 1997, 2012
Bme18I GGWCC 5 cut(s) 813, 1416, 1508, 2137, 2312
BmeT110I CYCGRG 1 cut(s) 210
BmiI GGNNCC 7 cut(s) 551, 1056, 1920, 2138, 2250, 2265, 2266
BmrFI CCNGG 6 cut(s) 322, 1058, 1736, 1850, 1997, 2012
BmrI ACTGGG 2 cut(s) 693, 1186
BmsI GCATC 4 cut(s) 486, 943, 1177, 2314
BmuI ACTGGG 2 cut(s) 693, 1186
BpiI GAAGAC 5 cut(s) 411, 737, 1046, 1335, 2511
BplI GAGNNNNNCTC 2 cut(s) 169, 201
BpmI CTGGAG 1 cut(s) 2078
Bpu10I CCTNAGC 1 cut(s) 2152
Bpu1102I GCTNAGC 1 cut(s) 7
BpuEI CTTGAG 6 cut(s) 125, 431, 545, 629, 728, 1177
BpuMI CCSGG 1 cut(s) 1058
Bsa29I ATCGAT 1 cut(s) 1622
BsaAI YACGTR 1 cut(s) 2234
BsaBI GATNNNNATC 1 cut(s) 1770
BsaJI CCNNGG 4 cut(s) 821, 1914, 2011, 2533
BsaWI WCCGGW 3 cut(s) 408, 1869, 2548
Bsc4I CCNNNNNNNGG 6 cut(s) 810, 822, 955, 1198, 1570, 1684
Bse118I RCCGGY 2 cut(s) 408, 1684
Bse1I ACTGG 8 cut(s) 288, 688, 759, 1192, 1786, 2140, 2275, 2342
Bse3DI GCAATG 1 cut(s) 2160
Bse8I GATNNNNATC 1 cut(s) 1770
BseBI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
BseCI ATCGAT 1 cut(s) 1622
BseDI CCNNGG 4 cut(s) 821, 1914, 2011, 2533
BseGI GGATG 6 cut(s) 25, 501, 1192, 1831, 1906, 2363
BseJI GATNNNNATC 1 cut(s) 1770
BseLI CCNNNNNNNGG 6 cut(s) 810, 822, 955, 1198, 1570, 1684
BseMI GCAATG 1 cut(s) 2160
BseNI ACTGG 8 cut(s) 288, 688, 759, 1192, 1786, 2140, 2275, 2342
BseRI GAGGAG 1 cut(s) 1904
BseSI GKGCMC 2 cut(s) 1058, 2268
BseXI GCAGC 9 cut(s) 47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
BseYI CCCAGC 1 cut(s) 1376
BsgI GTGCAG 2 cut(s) 2372, 2702
Bsh1236I CGCG 2 cut(s) 234, 261
BshFI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
BshTI ACCGGT 1 cut(s) 408
BshVI ATCGAT 1 cut(s) 1622
BsiHKAI GWGCWC 1 cut(s) 1151
BsiHKCI CYCGRG 1 cut(s) 210
BsiSI CCGG 5 cut(s) 409, 1058, 1685, 1870, 2549
BslFI GGGAC 1 cut(s) 2150
BslI CCNNNNNNNGG 6 cut(s) 810, 822, 955, 1198, 1570, 1684
BsmAI GTCTC 7 cut(s) 361, 421, 538, 730, 977, 1365, 2448
BsmBI CGTCTC 2 cut(s) 538, 1365
BsmFI GGGAC 1 cut(s) 2150
BsmI GAATGC 2 cut(s) 135, 2558
BsnI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
BsoBI CYCGRG 1 cut(s) 210
Bsp120I GGGCCC 2 cut(s) 1054, 2264
Bsp1286I GDGCHC 4 cut(s) 1058, 1151, 1860, 2268
Bsp1407I TGTACA 1 cut(s) 2542
Bsp1720I GCTNAGC 1 cut(s) 7
Bsp19I CCATGG 1 cut(s) 1914
BspACI CCGC 3 cut(s) 28, 116, 956
BspANI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
BspDI ATCGAT 1 cut(s) 1622
BspFNI CGCG 2 cut(s) 234, 261
BspHI TCATGA 2 cut(s) 1294, 2446
BspLI GGNNCC 7 cut(s) 551, 1056, 1920, 2138, 2250, 2265, 2266
BspMAI CTGCAG 1 cut(s) 1006
BspMI ACCTGC 1 cut(s) 2323
BspPI GGATC 5 cut(s) 402, 1627, 1675, 1880, 2014
BspQI GCTCTTC 1 cut(s) 1848
BspTI CTTAAG 1 cut(s) 1363
BsrDI GCAATG 1 cut(s) 2160
BsrFI RCCGGY 2 cut(s) 408, 1684
BsrGI TGTACA 1 cut(s) 2542
BsrI ACTGG 8 cut(s) 288, 688, 759, 1192, 1786, 2140, 2275, 2342
BssAI RCCGGY 2 cut(s) 408, 1684
BssECI CCNNGG 4 cut(s) 821, 1914, 2011, 2533
BssT1I CCWWGG 3 cut(s) 821, 1914, 2533
Bst2UI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
Bst4CI ACNGT 6 cut(s) 549, 736, 1067, 1416, 1884, 2350
Bst6I CTCTTC 7 cut(s) 294, 302, 865, 1071, 1529, 1848, 2625
BstAFI CTTAAG 1 cut(s) 1363
BstAUI TGTACA 1 cut(s) 2542
BstBAI YACGTR 1 cut(s) 2234
BstC8I GCNNGC 7 cut(s) 33, 114, 236, 240, 648, 1225, 2685
BstDSI CCRYGG 1 cut(s) 1914
BstEII GGTNACC 1 cut(s) 1991
BstENI CCTNNNNNAGG 1 cut(s) 1568
BstF5I GGATG 6 cut(s) 25, 501, 1192, 1831, 1906, 2363
BstFNI CGCG 2 cut(s) 234, 261
BstHHI GCGC 4 cut(s) 6, 234, 263, 929
BstMAI GTCTC 7 cut(s) 361, 421, 538, 730, 977, 1365, 2448
BstMWI GCNNNNNNNGC 4 cut(s) 640, 1001, 2324, 2684
BstNI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
BstPI GGTNACC 1 cut(s) 1991
BstSCI CCNGG 6 cut(s) 320, 1056, 1734, 1848, 1995, 2010
BstSFI CTRYAG 2 cut(s) 735, 1002
BstSLI GKGCMC 2 cut(s) 1058, 2268
BstUI CGCG 2 cut(s) 234, 261
BstV1I GCAGC 9 cut(s) 47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
BstV2I GAAGAC 5 cut(s) 411, 737, 1046, 1335, 2511
BstX2I RGATCY 3 cut(s) 1115, 1667, 2019
BstXI CCANNNNNNTGG 1 cut(s) 1929
BstYI RGATCY 3 cut(s) 1115, 1667, 2019
Bsu15I ATCGAT 1 cut(s) 1622
BsuRI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
BsuTUI ATCGAT 1 cut(s) 1622
BtgI CCRYGG 1 cut(s) 1914
BtgZI GCGATG 2 cut(s) 1077, 2496
BtsCI GGATG 6 cut(s) 25, 501, 1192, 1831, 1906, 2363
BtsI GCAGTG 2 cut(s) 2360, 2437
BtsIMutI CAGTG 5 cut(s) 1689, 2268, 2349, 2360, 2437
BveI ACCTGC 1 cut(s) 2323
Cac8I GCNNGC 7 cut(s) 33, 114, 236, 240, 648, 1225, 2685
CaiI CAGNNNCTG 1 cut(s) 269
CciI TCATGA 2 cut(s) 1294, 2446
CfoI GCGC 4 cut(s) 6, 234, 263, 929
Cfr10I RCCGGY 2 cut(s) 408, 1684
ClaI ATCGAT 1 cut(s) 1622
CseI GACGC 2 cut(s) 610, 1382
Csp6I GTAC 4 cut(s) 223, 287, 2281, 2543
CspAI ACCGGT 1 cut(s) 408
CspCI CAANNNNNGTGG 6 cut(s) 1456, 1491, 1636, 1671, 1941, 1976
CviAII CATG 6 cut(s) 934, 1173, 1295, 1724, 1915, 2447
CviQI GTAC 4 cut(s) 223, 287, 2281, 2543
EaeI YGGCCR 2 cut(s) 993, 2085
Eam1104I CTCTTC 7 cut(s) 294, 302, 865, 1071, 1529, 1848, 2625
EarI CTCTTC 7 cut(s) 294, 302, 865, 1071, 1529, 1848, 2625
EciI GGCGGA 1 cut(s) 131
Eco130I CCWWGG 3 cut(s) 821, 1914, 2533
Eco24I GRGCYC 3 cut(s) 1058, 1860, 2268
Eco47I GGWCC 5 cut(s) 813, 1416, 1508, 2137, 2312
Eco57I CTGAAG 5 cut(s) 662, 870, 1096, 1251, 2649
Eco88I CYCGRG 1 cut(s) 210
Eco91I GGTNACC 1 cut(s) 1991
EcoNI CCTNNNNNAGG 1 cut(s) 1568
EcoO109I RGGNCCY 3 cut(s) 1054, 2264, 2635
EcoO65I GGTNACC 1 cut(s) 1991
EcoRI GAATTC 1 cut(s) 469
EcoRII CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
EcoT14I CCWWGG 3 cut(s) 821, 1914, 2533
EcoT38I GRGCYC 3 cut(s) 1058, 1860, 2268
ErhI CCWWGG 3 cut(s) 821, 1914, 2533
Esp3I CGTCTC 2 cut(s) 538, 1365
FaeI CATG 6 cut(s) 937, 1176, 1298, 1727, 1918, 2450
FalI AAGNNNNNCTT 2 cut(s) 814, 846
FaqI GGGAC 1 cut(s) 2150
FatI CATG 6 cut(s) 933, 1172, 1294, 1723, 1914, 2446
FbaI TGATCA 2 cut(s) 775, 2169
FokI GGATG 6 cut(s) 32, 508, 1199, 1838, 1913, 2350
FriOI GRGCYC 3 cut(s) 1058, 1860, 2268
FspBI CTAG 8 cut(s) 522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
GlaI GCGC 4 cut(s) 5, 233, 262, 928
GsaI CCCAGC 1 cut(s) 1380
GsuI CTGGAG 1 cut(s) 2078
HaeIII GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
HapII CCGG 5 cut(s) 409, 1058, 1685, 1870, 2549
HgaI GACGC 2 cut(s) 610, 1382
HhaI GCGC 4 cut(s) 6, 234, 263, 929
Hin1II CATG 6 cut(s) 937, 1176, 1298, 1727, 1918, 2450
Hin6I GCGC 4 cut(s) 4, 232, 261, 927
HinP1I GCGC 4 cut(s) 4, 232, 261, 927
HincII GTYRAC 2 cut(s) 1063, 1608
HindII GTYRAC 2 cut(s) 1063, 1608
HindIII AAGCTT 3 cut(s) 80, 588, 2485
HpaII CCGG 5 cut(s) 409, 1058, 1685, 1870, 2549
HphI GGTGA 8 cut(s) 353, 657, 770, 938, 1048, 1906, 2593, 2617
Hpy166II GTNNAC 3 cut(s) 1063, 1608, 1846
Hpy8I GTNNAC 3 cut(s) 1063, 1608, 1846
HpyCH4III ACNGT 6 cut(s) 549, 736, 1067, 1416, 1884, 2350
HpyCH4IV ACGT 6 cut(s) 103, 326, 367, 572, 2215, 2233
HpyF10VI GCNNNNNNNGC 4 cut(s) 640, 1001, 2324, 2684
HpySE526I ACGT 6 cut(s) 103, 326, 367, 572, 2215, 2233
Hsp92II CATG 6 cut(s) 937, 1176, 1298, 1727, 1918, 2450
HspAI GCGC 4 cut(s) 4, 232, 261, 927
Ksp22I TGATCA 2 cut(s) 775, 2169
LguI GCTCTTC 1 cut(s) 1848
LmnI GCTCC 7 cut(s) 229, 1127, 1154, 1234, 1924, 2065, 2248
Lsp1109I GCAGC 9 cut(s) 47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
LweI GCATC 4 cut(s) 486, 943, 1177, 2314
MaeI CTAG 8 cut(s) 522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
MaeII ACGT 6 cut(s) 103, 326, 367, 572, 2215, 2233
MaeIII GTNAC 5 cut(s) 944, 1687, 1991, 2038, 2344
MfeI CAATTG 1 cut(s) 1953
MflI RGATCY 3 cut(s) 1115, 1667, 2019
MhlI GDGCHC 4 cut(s) 1058, 1151, 1860, 2268
MlsI TGGCCA 2 cut(s) 995, 2087
MluNI TGGCCA 2 cut(s) 995, 2087
MlyI GAGTC 3 cut(s) 952, 1088, 1613
MmeI TCCRAC 5 cut(s) 467, 521, 1179, 1866, 2169
Mox20I TGGCCA 2 cut(s) 995, 2087
MroXI GAANNNNTTC 3 cut(s) 1584, 1634, 1817
MscI TGGCCA 2 cut(s) 995, 2087
MseI TTAA 9 cut(s) 249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
MslI CAYNNNNRTG 5 cut(s) 366, 951, 1365, 2165, 2368
Msp20I TGGCCA 2 cut(s) 995, 2087
MspA1I CMGCKG 2 cut(s) 266, 1505
MspCI CTTAAG 1 cut(s) 1363
MspI CCGG 5 cut(s) 409, 1058, 1685, 1870, 2549
MspR9I CCNGG 6 cut(s) 322, 1058, 1736, 1850, 1997, 2012
MunI CAATTG 1 cut(s) 1953
Mva1269I GAATGC 2 cut(s) 135, 2558
MvaI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
MvnI CGCG 2 cut(s) 234, 261
MwoI GCNNNNNNNGC 4 cut(s) 640, 1001, 2324, 2684
NciI CCSGG 1 cut(s) 1058
NcoI CCATGG 1 cut(s) 1914
NlaIII CATG 6 cut(s) 937, 1176, 1298, 1727, 1918, 2450
NlaIV GGNNCC 7 cut(s) 551, 1056, 1920, 2138, 2250, 2265, 2266
NmeAIII GCCGAG 1 cut(s) 2568
NmuCI GTSAC 4 cut(s) 944, 1687, 2038, 2344
OliI CACNNNNGTG 2 cut(s) 366, 1365
PagI TCATGA 2 cut(s) 1294, 2446
PciSI GCTCTTC 1 cut(s) 1848
PcsI WCGNNNNNNNCGW 1 cut(s) 1555
PctI GAATGC 2 cut(s) 135, 2558
PdmI GAANNNNTTC 3 cut(s) 1584, 1634, 1817
PfeI GAWTC 7 cut(s) 662, 712, 1085, 1246, 1580, 1838, 2200
PflMI CCANNNNNTGG 1 cut(s) 1198
PinAI ACCGGT 1 cut(s) 408
PleI GAGTC 3 cut(s) 951, 1087, 1612
PpsI GAGTC 3 cut(s) 951, 1087, 1612
Ppu21I YACGTR 1 cut(s) 2234
Psp6I CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
PspEI GGTNACC 1 cut(s) 1991
PspFI CCCAGC 1 cut(s) 1376
PspGI CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
PspN4I GGNNCC 7 cut(s) 551, 1056, 1920, 2138, 2250, 2265, 2266
PspOMI GGGCCC 2 cut(s) 1054, 2264
PstI CTGCAG 1 cut(s) 1006
PstNI CAGNNNCTG 1 cut(s) 269
PsuI RGATCY 3 cut(s) 1115, 1667, 2019
PvuII CAGCTG 2 cut(s) 266, 1505
RsaI GTAC 4 cut(s) 224, 288, 2282, 2544
RsaNI GTAC 4 cut(s) 223, 287, 2281, 2543
RseI CAYNNNNRTG 5 cut(s) 366, 951, 1365, 2165, 2368
SapI GCTCTTC 1 cut(s) 1848
SaqAI TTAA 9 cut(s) 249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
SchI GAGTC 3 cut(s) 952, 1088, 1613
ScrFI CCNGG 6 cut(s) 322, 1058, 1736, 1850, 1997, 2012
SduI GDGCHC 4 cut(s) 1058, 1151, 1860, 2268
SfaNI GCATC 4 cut(s) 486, 943, 1177, 2314
SfcI CTRYAG 2 cut(s) 735, 1002
SinI GGWCC 5 cut(s) 813, 1416, 1508, 2137, 2312
SmiMI CAYNNNNRTG 5 cut(s) 366, 951, 1365, 2165, 2368
SmlI CTYRAG 7 cut(s) 140, 446, 560, 608, 707, 1156, 1363
SmoI CTYRAG 7 cut(s) 140, 446, 560, 608, 707, 1156, 1363
SsiI CCGC 3 cut(s) 28, 116, 956
SspI AATATT 1 cut(s) 1750
SspMI CTAG 8 cut(s) 522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
StyD4I CCNGG 6 cut(s) 320, 1056, 1734, 1848, 1995, 2010
StyI CCWWGG 3 cut(s) 821, 1914, 2533
TaaI ACNGT 6 cut(s) 549, 736, 1067, 1416, 1884, 2350
TaiI ACGT 6 cut(s) 106, 329, 370, 575, 2218, 2236
TaqI TCGA 5 cut(s) 639, 703, 728, 1622, 2417
TatI WGTACW 2 cut(s) 222, 2542
TauI GCSGC 1 cut(s) 31
TfiI GAWTC 7 cut(s) 662, 712, 1085, 1246, 1580, 1838, 2200
Tru1I TTAA 9 cut(s) 249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
Tru9I TTAA 9 cut(s) 249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
TscAI CASTG 5 cut(s) 1696, 2275, 2349, 2360, 2437
TseFI GTSAC 4 cut(s) 944, 1687, 2038, 2344
TseI GCWGC 9 cut(s) 35, 242, 263, 266, 643, 1220, 1430, 1660, 1760
Tsp45I GTSAC 4 cut(s) 944, 1687, 2038, 2344
TspGWI ACGGA 2 cut(s) 744, 2356
TspRI CASTG 5 cut(s) 1696, 2275, 2349, 2360, 2437
Van91I CCANNNNNTGG 1 cut(s) 1198
Vha464I CTTAAG 1 cut(s) 1363
VpaK11BI GGWCC 5 cut(s) 813, 1416, 1508, 2137, 2312
XagI CCTNNNNNAGG 1 cut(s) 1568
XapI RAATTY 5 cut(s) 469, 1010, 1905, 2503, 2691
XbaI TCTAGA 3 cut(s) 521, 2191, 2522
XmnI GAANNNNTTC 3 cut(s) 1584, 1634, 1817
XspI CTAG 8 cut(s) 522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.