Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005038.1

Orthogroup ID

OG0002683

Physical Location & Seq

Genomic Coordinates Reverse (-)

61599 .. 66827

Gene Structure 5229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

atgaagcctccaaaaccggccttcacgactactgtcttggtggtggtgttgtgtacttgtctcagcttggccgccagctacgatctggcttccgacagacaggctctgttgagtttccgagctagcgttggaggccgctcgacgttttggaatgtgatggagaccaacccgtgttcctggactggtgtgacgtgcgtgtcggaccgagtcactgagttacgcgttcccggttggggactccatggcccgctgcctctcggtctcggcaacttgaccaaactccaagccctgtctctccgcaaaaacgcgcttgacggcccgatacctcccgactttgttaacctcgtcaatctgcagaacctctacttgacagctaacaggttttcgggtccaattcctgactttatcttcggtttgcagagcctggagaggttggatgtctctcagaataagttttccggtgaaatttcgaccgggtttaataatttgacgaacttggtgtccctgcatttggaggagaaccagcttaatgggtcaatcccggagttggatatgccggctcttcgacagttcaatgtatcttataaccggctaaacgggtcggtacccgcaaagctttcaggctgggaggtgggtgcctttgcagggaacttgcagctgtgcgggaagccgatgacggcttgtaatgggactgagattgggagtgggagtgggagtgggagtaagaagaagttgtcaggtggagcaattgcagggatcgtgataggttgcgtaattggatttttcatcattgttgccattttgtactttttgtgtggaagaaagaaaaatggggaaaagggtgctaattatgttgcgccgcggagtgttcccgcggttgaagtcgcaaagagatcattggataccgagagttcgaatgctgattactcttctggccaaaaaaggagtgtgagtagtaagaacttggtgttttttgggaatgcggtgaaggtgtttgatttggaggatttgttgagggcatcggctgaggtacttgggaaggggactttcgggacggcgtataaggcggctttggaaatgggggtgtccatggcagtgaagagattgaaggaagtgactgtatcggataatgaatttaaggagaagattgatcagattgggaatatggatcatgtgaacttggtgccactcagggcttactattatagcagagacgagaagcttctggtttatgattacatgcctatgggaagcttgtctgctcttttacatggaaacagaggctctggaagaactccattgaattgggaaacaaggtgtggcattgctgtcggagctgctcgtgcaatcacatacttgcactctcatggtcccacaatctcccatgggaacatcaaatcttcaaacattcttctcacttcgtcttatgaagctcgcgtctctgacttttgccttgctcattttgcaagcccaaccgctactcccaaccgcatttctggttatcgtgctccagaagtcacagatactagtaaagtaacccaaaaggcagatgtttacagctttggtgtgttgctattggagctgcttacagggaagcctccaacccaatccctcatgactgaggaaggagtagaccttccaagatggtactcggccaccgacacgtcgtttgatcagcagtatcctccaggtggcatgagatggttagatggcagtgccctccagatggcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0008150 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0016020 GO:0030054 GO:0030312 GO:0031090 GO:0031224 GO:0031225 GO:0031226 GO:0033993 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097305 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

577

Amino Acids

62.28

Weight (kDa)

8.65

Isoelectric Point (pI)

31.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 65	1.8e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	84 - 175	7.2e-08	Leucine-rich repeat region
PK_Tyr_Ser-Thr	PF07714	343 - 542	3.6e-32	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	343 - 537	5.2e-32	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002683)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48480
fragaria_vesca	FvH4_2g12190 FvH4_2g12190 FvH4_5g17570
malus_domestica	MD02G1259100.v1.1 MD06G1231600.v1.1 MD09G1086600.v1.1 MD09G1271200.v1.1 MD14G1238300.v1.1 MD17G1269300.v1.1
prunus_persica	Prupe.3G017300_v2.0.a1 Prupe.5G235500_v2.0.a1
pyrus_communis	pycom06g20550 pycom09g18220 pycom14g19950 pycom17g26800
rosa_chinensis	RchiOBHm_Chr3g0491091 RchiOBHm_Chr7g0178081
rosa_laevigata	RLG00000005473 RLG00000022865
rosa_multiflora	Rmu_co8170494.1_g000001 Rmu_co8379533.1_g000001 Rmu_co8445967.1_g000001 Rmu_sc0000425.1_g000007 Rmu_sc0005038.1_g000014 Rmu_ssc0000386.1_g000061 Rmu_ssc0000386.1_g000063
rosa_roxburghii	Rroxscaffold_6G00393220
rosa_rugosa	Rorug03G0246000 Rorug06G0413300
rosa_samantha	Rh3AG296200 Rh3BG332200 Rh3CG329300 Rh3DG329900 Rh7AG012600 Rh7BG012500 Rh7CG012500 Rh7DG012800
rosa_wichuraiana	Rw3G026140 Rw7G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	585
AasI	GACNNNNNNGTC	1 cut(s)	196
Acc65I	GGTACC	1 cut(s)	604
AccB1I	GGYRCC	3 cut(s)	604, 635, 1183
AccBSI	CCGCTC	1 cut(s)	138
AccI	GTMKAC	1 cut(s)	1632
AccII	CGCG	5 cut(s)	222, 308, 862, 875, 1437
AclWI	GGATC	2 cut(s)	764, 1176
AcoI	YGGCCR	3 cut(s)	69, 934, 1653
AcsI	RAATTY	2 cut(s)	465, 1133
AfaI	GTAC	5 cut(s)	55, 606, 806, 1032, 1649
AfiI	CCNNNNNNNGG	6 cut(s)	233, 511, 547, 645, 1691, 1726
AflIII	ACRYGT	2 cut(s)	220, 1662
AgsI	TTSAA	5 cut(s)	574, 881, 1108, 1303, 1404
AhlI	ACTAGT	1 cut(s)	1526
AjiI	CACGTC	2 cut(s)	192, 1665
AjnI	CCWGG	3 cut(s)	176, 423, 1687
AloI	GAACNNNNNNTCC	2 cut(s)	485, 517
Alw21I	GWGCWC	1 cut(s)	1510
Alw26I	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
AlwI	GGATC	2 cut(s)	764, 1176
AlwNI	CAGNNNCTG	2 cut(s)	106, 424
AoxI	GGCC	7 cut(s)	18, 69, 133, 244, 316, 934, 1653
ApeKI	GCWGC	4 cut(s)	250, 655, 1337, 1582
ApoI	RAATTY	2 cut(s)	465, 1133
ArsI	GACNNNNNNTTYG	6 cut(s)	392, 424, 485, 517, 1652, 1684
Asp718I	GGTACC	1 cut(s)	604
AspLEI	GCGC	2 cut(s)	310, 859
AspS9I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
AsuC2I	CCSGG	3 cut(s)	228, 475, 542
AsuHPI	GGTGA	2 cut(s)	473, 997
AsuII	TTCGAA	1 cut(s)	914
AsuNHI	GCTAGC	1 cut(s)	122
AvaII	GGWCC	3 cut(s)	202, 389, 1370
BaeGI	GKGCMC	1 cut(s)	1720
BalI	TGGCCA	1 cut(s)	936
BanI	GGYRCC	3 cut(s)	604, 635, 1183
BauI	CACGAG	1 cut(s)	1341
Bbv12I	GWGCWC	1 cut(s)	1510
BbvCI	CCTCAGC	1 cut(s)	1026
BbvI	GCAGC	4 cut(s)	237, 667, 1324, 1569
BccI	CCATC	5 cut(s)	151, 1638, 1695, 1703, 1720
BceAI	ACGGC	3 cut(s)	331, 693, 1071
BcgI	CGANNNNNNTGC	2 cut(s)	1312, 1346
BciT130I	CCWGG	3 cut(s)	178, 425, 1689
BciVI	GTATCC	2 cut(s)	895, 1692
BclI	TGATCA	2 cut(s)	1150, 1672
BcnI	CCSGG	3 cut(s)	228, 475, 542
BcoDI	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
BcuI	ACTAGT	1 cut(s)	1526
BfaI	CTAG	2 cut(s)	123, 1527
BfmI	CTRYAG	1 cut(s)	353
BfuI	GTATCC	2 cut(s)	895, 1692
BisI	GCNGC	8 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583
BlsI	GCNGC	8 cut(s)	73, 137, 252, 657, 861, 1069, 1339, 1584
Bme1390I	CCNGG	6 cut(s)	178, 228, 425, 475, 542, 1689
Bme18I	GGWCC	3 cut(s)	202, 389, 1370
BmgBI	CACGTC	2 cut(s)	192, 1665
BmgT120I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
BmiI	GGNNCC	5 cut(s)	390, 606, 637, 1185, 1372
BmrFI	CCNGG	6 cut(s)	178, 228, 425, 475, 542, 1689
BmsI	GCATC	1 cut(s)	1028
BmtI	GCTAGC	1 cut(s)	126
BoxI	GACNNNNGTC	1 cut(s)	32
BpmI	CTGGAG	4 cut(s)	446, 1494, 1671, 1706
Bpu10I	CCTNAGC	1 cut(s)	1026
Bpu14I	TTCGAA	1 cut(s)	914
BpuMI	CCSGG	3 cut(s)	228, 475, 542
BsaI	GGTCTC	2 cut(s)	155, 266
BsaJI	CCNNGG	5 cut(s)	241, 860, 873, 1089, 1384
BsaWI	WCCGGW	1 cut(s)	458
Bsc4I	CCNNNNNNNGG	6 cut(s)	233, 511, 547, 645, 1691, 1726
Bse118I	RCCGGY	3 cut(s)	16, 556, 588
Bse1I	ACTGG	1 cut(s)	187
Bse3DI	GCAATG	1 cut(s)	1323
BseBI	CCWGG	3 cut(s)	178, 425, 1689
BseDI	CCNNGG	5 cut(s)	241, 860, 873, 1089, 1384
BseGI	GGATG	1 cut(s)	442
BseLI	CCNNNNNNNGG	6 cut(s)	233, 511, 547, 645, 1691, 1726
BseMI	GCAATG	1 cut(s)	1323
BseMII	CTCAG	7 cut(s)	76, 204, 458, 684, 1017, 1204, 1611
BseNI	ACTGG	1 cut(s)	187
BseRI	GAGGAG	1 cut(s)	530
BseSI	GKGCMC	1 cut(s)	1720
BseXI	GCAGC	4 cut(s)	237, 667, 1324, 1569
BseYI	CCCAGC	1 cut(s)	624
Bsh1236I	CGCG	5 cut(s)	222, 308, 862, 875, 1437
Bsh1285I	CGRYCG	1 cut(s)	474
BshFI	GGCC	7 cut(s)	20, 71, 135, 246, 318, 936, 1655
BshNI	GGYRCC	3 cut(s)	604, 635, 1183
BsiEI	CGRYCG	1 cut(s)	474
BsiHKAI	GWGCWC	1 cut(s)	1510
BsiSI	CCGG	7 cut(s)	17, 228, 459, 474, 542, 557, 589
BslFI	GGGAC	6 cut(s)	249, 487, 703, 1057, 1066, 1356
BslI	CCNNNNNNNGG	6 cut(s)	233, 511, 547, 645, 1691, 1726
BsmAI	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
BsmBI	CGTCTC	2 cut(s)	1206, 1444
BsmFI	GGGAC	6 cut(s)	249, 487, 703, 1057, 1066, 1356
BsmI	GAATGC	2 cut(s)	922, 985
BsnI	GGCC	7 cut(s)	20, 71, 135, 246, 318, 936, 1655
Bso31I	GGTCTC	2 cut(s)	155, 266
Bsp119I	TTCGAA	1 cut(s)	914
Bsp1286I	GDGCHC	2 cut(s)	1510, 1720
Bsp143I	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
Bsp19I	CCATGG	3 cut(s)	241, 1089, 1384
BspANI	GGCC	7 cut(s)	20, 71, 135, 246, 318, 936, 1655
BspCNI	CTCAG	7 cut(s)	75, 205, 457, 685, 1018, 1203, 1612
BspFNI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
BspHI	TCATGA	1 cut(s)	1614
BspLI	GGNNCC	5 cut(s)	390, 606, 637, 1185, 1372
BspMAI	CTGCAG	1 cut(s)	357
BspOI	GCTAGC	1 cut(s)	126
BspPI	GGATC	2 cut(s)	764, 1176
BspQI	GCTCTTC	1 cut(s)	567
BspT104I	TTCGAA	1 cut(s)	914
BspT107I	GGYRCC	3 cut(s)	604, 635, 1183
BspTNI	GGTCTC	2 cut(s)	155, 266
BsrBI	CCGCTC	1 cut(s)	138
BsrDI	GCAATG	1 cut(s)	1323
BsrFI	RCCGGY	3 cut(s)	16, 556, 588
BsrI	ACTGG	1 cut(s)	187
BssAI	RCCGGY	3 cut(s)	16, 556, 588
BssECI	CCNNGG	5 cut(s)	241, 860, 873, 1089, 1384
BssMI	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
BssSI	CACGAG	1 cut(s)	1341
BssT1I	CCWWGG	3 cut(s)	241, 1089, 1384
Bst2BI	CACGAG	1 cut(s)	1341
Bst2UI	CCWGG	3 cut(s)	178, 425, 1689
Bst4CI	ACNGT	3 cut(s)	34, 570, 1120
Bst6I	CTCTTC	3 cut(s)	567, 934, 1094
BstBI	TTCGAA	1 cut(s)	914
BstC8I	GCNNGC	6 cut(s)	76, 124, 248, 558, 1435, 1468
BstDEI	CTNAG	7 cut(s)	62, 213, 444, 693, 1026, 1190, 1620
BstDSI	CCRYGG	5 cut(s)	241, 860, 873, 1089, 1384
BstF5I	GGATG	1 cut(s)	442
BstFNI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
BstHHI	GCGC	2 cut(s)	310, 859
BstKTI	GATC	6 cut(s)	85, 759, 896, 1153, 1171, 1675
BstMAI	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
BstMBI	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
BstMCI	CGRYCG	1 cut(s)	474
BstMWI	GCNNNNNNNGC	6 cut(s)	132, 1064, 1334, 1343, 1463, 1579
BstNI	CCWGG	3 cut(s)	178, 425, 1689
BstNSI	RCATGY	1 cut(s)	1243
BstPAI	GACNNNNGTC	1 cut(s)	32
BstSCI	CCNGG	6 cut(s)	176, 226, 423, 473, 540, 1687
BstSFI	CTRYAG	1 cut(s)	353
BstSLI	GKGCMC	1 cut(s)	1720
BstUI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
BstV1I	GCAGC	4 cut(s)	237, 667, 1324, 1569
BstXI	CCANNNNNNTGG	2 cut(s)	530, 1305
BsuI	GTATCC	2 cut(s)	895, 1692
BsuRI	GGCC	7 cut(s)	20, 71, 135, 246, 318, 936, 1655
BtgI	CCRYGG	5 cut(s)	241, 860, 873, 1089, 1384
BtrI	CACGTC	2 cut(s)	192, 1665
BtsCI	GGATG	1 cut(s)	442
BtsI	GCAGTG	2 cut(s)	1101, 1720
BtsIMutI	CAGTG	3 cut(s)	210, 1101, 1720
Cac8I	GCNNGC	6 cut(s)	76, 124, 248, 558, 1435, 1468
CaiI	CAGNNNCTG	2 cut(s)	106, 424
CciI	TCATGA	1 cut(s)	1614
CfoI	GCGC	2 cut(s)	310, 859
Cfr10I	RCCGGY	3 cut(s)	16, 556, 588
Cfr13I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
Cfr42I	CCGCGG	2 cut(s)	863, 876
CpoI	CGGWCCG	1 cut(s)	202
CseI	GACGC	1 cut(s)	1426
Csp6I	GTAC	5 cut(s)	54, 605, 805, 1031, 1648
CspI	CGGWCCG	1 cut(s)	202
CviQI	GTAC	5 cut(s)	54, 605, 805, 1031, 1648
DdeI	CTNAG	7 cut(s)	62, 213, 444, 693, 1026, 1190, 1620
DpnI	GATC	6 cut(s)	84, 758, 895, 1152, 1170, 1674
DpnII	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
DrdI	GACNNNNNNGTC	1 cut(s)	196
DseDI	GACNNNNNNGTC	1 cut(s)	196
EaeI	YGGCCR	3 cut(s)	69, 934, 1653
Eam1104I	CTCTTC	3 cut(s)	567, 934, 1094
EarI	CTCTTC	3 cut(s)	567, 934, 1094
Eco130I	CCWWGG	3 cut(s)	241, 1089, 1384
Eco31I	GGTCTC	2 cut(s)	155, 266
Eco47I	GGWCC	3 cut(s)	202, 389, 1370
EcoRII	CCWGG	3 cut(s)	176, 423, 1687
EcoT14I	CCWWGG	3 cut(s)	241, 1089, 1384
ErhI	CCWWGG	3 cut(s)	241, 1089, 1384
Esp3I	CGTCTC	2 cut(s)	1206, 1444
FaqI	GGGAC	6 cut(s)	249, 487, 703, 1057, 1066, 1356
FauI	CCCGC	4 cut(s)	255, 616, 656, 880
FbaI	TGATCA	2 cut(s)	1150, 1672
FblI	GTMKAC	1 cut(s)	1632
Fnu4HI	GCNGC	8 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583
FokI	GGATG	1 cut(s)	449
Fsp4HI	GCNGC	8 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583
FspBI	CTAG	2 cut(s)	123, 1527
GlaI	GCGC	2 cut(s)	309, 858
GluI	GCNGC	8 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583
GsaI	CCCAGC	1 cut(s)	628
GsuI	CTGGAG	4 cut(s)	446, 1494, 1671, 1706
HaeIII	GGCC	7 cut(s)	20, 71, 135, 246, 318, 936, 1655
HapII	CCGG	7 cut(s)	17, 228, 459, 474, 542, 557, 589
HgaI	GACGC	1 cut(s)	1426
HhaI	GCGC	2 cut(s)	310, 859
Hin6I	GCGC	2 cut(s)	308, 857
HinP1I	GCGC	2 cut(s)	308, 857
HincII	GTYRAC	1 cut(s)	340
HindII	GTYRAC	1 cut(s)	340
HindIII	AAGCTT	3 cut(s)	614, 1220, 1252
HinfI	GANTC	2 cut(s)	207, 237
HpaI	GTTAAC	1 cut(s)	340
HpaII	CCGG	7 cut(s)	17, 228, 459, 474, 542, 557, 589
HphI	GGTGA	2 cut(s)	473, 997
Hpy166II	GTNNAC	5 cut(s)	54, 340, 1177, 1555, 1633
Hpy188I	TCNGA	8 cut(s)	94, 119, 202, 447, 1126, 1155, 1334, 1444
Hpy188III	TCNNGA	9 cut(s)	25, 329, 398, 760, 1051, 1287, 1511, 1615, 1723
Hpy8I	GTNNAC	5 cut(s)	54, 340, 1177, 1555, 1633
Hpy99I	CGWCG	2 cut(s)	145, 1669
HpyAV	CCTTC	6 cut(s)	31, 982, 1033, 1102, 1619, 1646
HpyCH4III	ACNGT	3 cut(s)	34, 570, 1120
HpyCH4IV	ACGT	3 cut(s)	143, 191, 1664
HpyCH4V	TGCA	9 cut(s)	355, 418, 508, 644, 655, 752, 1346, 1360, 1466
HpyF10VI	GCNNNNNNNGC	6 cut(s)	132, 1064, 1334, 1343, 1463, 1579
HpyF3I	CTNAG	7 cut(s)	62, 213, 444, 693, 1026, 1190, 1620
HpySE526I	ACGT	3 cut(s)	143, 191, 1664
HspAI	GCGC	2 cut(s)	308, 857
KpnI	GGTACC	1 cut(s)	608
KroI	GCCGGC	1 cut(s)	556
KroNI	GCCGGC	1 cut(s)	558
Ksp22I	TGATCA	2 cut(s)	1150, 1672
KspAI	GTTAAC	1 cut(s)	340
KspI	CCGCGG	2 cut(s)	863, 876
Kzo9I	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
LguI	GCTCTTC	1 cut(s)	567
LmnI	GCTCC	4 cut(s)	743, 1334, 1513, 1579
Lsp1109I	GCAGC	4 cut(s)	237, 667, 1324, 1569
LweI	GCATC	1 cut(s)	1028
MaeI	CTAG	2 cut(s)	123, 1527
MaeII	ACGT	3 cut(s)	143, 191, 1664
MaeIII	GTNAC	6 cut(s)	187, 208, 216, 1114, 1516, 1534
MalI	GATC	6 cut(s)	84, 758, 895, 1152, 1170, 1674
MbiI	CCGCTC	1 cut(s)	138
MboI	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
MfeI	CAATTG	1 cut(s)	747
MhlI	GDGCHC	2 cut(s)	1510, 1720
MlsI	TGGCCA	1 cut(s)	936
MluCI	AATT	8 cut(s)	393, 465, 484, 747, 774, 847, 1133, 1303
MluI	ACGCGT	1 cut(s)	220
MluNI	TGGCCA	1 cut(s)	936
MlyI	GAGTC	2 cut(s)	216, 231
MmeI	TCCRAC	7 cut(s)	109, 117, 180, 414, 528, 1312, 1625
Mox20I	TGGCCA	1 cut(s)	936
MroNI	GCCGGC	1 cut(s)	556
MscI	TGGCCA	1 cut(s)	936
MseI	TTAA	4 cut(s)	339, 480, 528, 1137
MslI	CAYNNNNRTG	3 cut(s)	1094, 1244, 1365
Msp20I	TGGCCA	1 cut(s)	936
MspA1I	CMGCKG	4 cut(s)	250, 658, 862, 875
MspI	CCGG	7 cut(s)	17, 228, 459, 474, 542, 557, 589
MspR9I	CCNGG	6 cut(s)	178, 228, 425, 475, 542, 1689
MunI	CAATTG	1 cut(s)	747
Mva1269I	GAATGC	2 cut(s)	922, 985
MvaI	CCWGG	3 cut(s)	178, 425, 1689
MvnI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
MwoI	GCNNNNNNNGC	6 cut(s)	132, 1064, 1334, 1343, 1463, 1579
NaeI	GCCGGC	1 cut(s)	558
NciI	CCSGG	3 cut(s)	228, 475, 542
NcoI	CCATGG	3 cut(s)	241, 1089, 1384
NdeII	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
NgoMIV	GCCGGC	1 cut(s)	556
NheI	GCTAGC	1 cut(s)	122
NlaIV	GGNNCC	5 cut(s)	390, 606, 637, 1185, 1372
NmeAIII	GCCGAG	2 cut(s)	243, 1631
NmuCI	GTSAC	4 cut(s)	187, 208, 1114, 1516
NspI	RCATGY	1 cut(s)	1243
NspV	TTCGAA	1 cut(s)	914
PagI	TCATGA	1 cut(s)	1614
PciSI	GCTCTTC	1 cut(s)	567
PctI	GAATGC	2 cut(s)	922, 985
PdiI	GCCGGC	1 cut(s)	558
PflFI	GACNNNGTC	1 cut(s)	206
PfoI	TCCNGGA	2 cut(s)	176, 540
PkrI	GCNGC	8 cut(s)	73, 137, 252, 657, 861, 1069, 1339, 1584
PleI	GAGTC	2 cut(s)	215, 231
PpsI	GAGTC	2 cut(s)	215, 231
PshAI	GACNNNNGTC	1 cut(s)	32
PsiI	TTATAA	1 cut(s)	585
Psp6I	CCWGG	3 cut(s)	176, 423, 1687
PspFI	CCCAGC	1 cut(s)	624
PspGI	CCWGG	3 cut(s)	176, 423, 1687
PspN4I	GGNNCC	5 cut(s)	390, 606, 637, 1185, 1372
PspPI	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
PstI	CTGCAG	1 cut(s)	357
PstNI	CAGNNNCTG	2 cut(s)	106, 424
PsyI	GACNNNGTC	1 cut(s)	206
PvuII	CAGCTG	1 cut(s)	658
RsaI	GTAC	5 cut(s)	55, 606, 806, 1032, 1649
RsaNI	GTAC	5 cut(s)	54, 605, 805, 1031, 1648
RseI	CAYNNNNRTG	3 cut(s)	1094, 1244, 1365
Rsr2I	CGGWCCG	1 cut(s)	202
RsrII	CGGWCCG	1 cut(s)	202
SacII	CCGCGG	2 cut(s)	863, 876
SapI	GCTCTTC	1 cut(s)	567
SaqAI	TTAA	4 cut(s)	339, 480, 528, 1137
SatI	GCNGC	8 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583
Sau3AI	GATC	6 cut(s)	82, 756, 893, 1150, 1168, 1672
Sau96I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
SchI	GAGTC	2 cut(s)	216, 231
ScrFI	CCNGG	6 cut(s)	178, 228, 425, 475, 542, 1689
SduI	GDGCHC	2 cut(s)	1510, 1720
SfaNI	GCATC	1 cut(s)	1028
SfcI	CTRYAG	1 cut(s)	353
Sfr303I	CCGCGG	2 cut(s)	863, 876
SfuI	TTCGAA	1 cut(s)	914
SgrBI	CCGCGG	2 cut(s)	863, 876
SinI	GGWCC	3 cut(s)	202, 389, 1370
SmiMI	CAYNNNNRTG	3 cut(s)	1094, 1244, 1365
SpeI	ACTAGT	1 cut(s)	1526
Sse9I	AATT	8 cut(s)	393, 465, 484, 747, 774, 847, 1133, 1303
SspMI	CTAG	2 cut(s)	123, 1527
StyD4I	CCNGG	6 cut(s)	176, 226, 423, 473, 540, 1687
StyI	CCWWGG	3 cut(s)	241, 1089, 1384
TaaI	ACNGT	3 cut(s)	34, 570, 1120
TaiI	ACGT	3 cut(s)	146, 194, 1667
TaqI	TCGA	4 cut(s)	140, 470, 565, 914
TaqII	GACCGA	2 cut(s)	219, 248
TasI	AATT	8 cut(s)	393, 465, 484, 747, 774, 847, 1133, 1303
TatI	WGTACW	2 cut(s)	53, 804
TauI	GCSGC	4 cut(s)	74, 138, 862, 1070
Tru1I	TTAA	4 cut(s)	339, 480, 528, 1137
Tru9I	TTAA	4 cut(s)	339, 480, 528, 1137
TscAI	CASTG	3 cut(s)	217, 1101, 1720
TseFI	GTSAC	4 cut(s)	187, 208, 1114, 1516
TseI	GCWGC	4 cut(s)	250, 655, 1337, 1582
Tsp45I	GTSAC	4 cut(s)	187, 208, 1114, 1516
TspDTI	ATGAA	4 cut(s)	17, 775, 1146, 1443
TspRI	CASTG	3 cut(s)	217, 1101, 1720
Tth111I	GACNNNGTC	1 cut(s)	206
VpaK11BI	GGWCC	3 cut(s)	202, 389, 1370
XapI	RAATTY	2 cut(s)	465, 1133
XceI	RCATGY	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	1 cut(s)	82
XmiI	GTMKAC	1 cut(s)	1632
XspI	CTAG	2 cut(s)	123, 1527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.