Rmu_sc0005201.1_g000006

Amino acid permease

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005201.1
Physical Location & Seq
Reverse (-)
24739 .. 27764
3026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005201.1_g000006.1.cds

Sequence Viewer

Length: 1494 bp
atggtgttgagtgaggttgaggctgaatttcaacatgacttatctgaatctggtttgaacaatccggcgaagtacggggaagctggagaagaactacaggtggatgatgatggcaaactcaaaaggactggaacggtatggactgcctgtgcccatataatcacagcatcaataggagctggagtgctatctctagcctgggcaatggcccaactcggatggcttgccggcattttcattctcttgttctgcaccttcgctgctggctacgcttccactctcttagcagattgttacagatttccggacccagtgtcaggcaagagaaactactcctatatggaggctgtcaaagtctatttaggtaaatccattactattgaagttaattcttatcaagtccaacttcccaatgtcgatctaggtggaacaatgcacaagatttgtggatggatgttatatttgaaccttgctaccattggagttggcttcactataaccaccgcaaaaagcttggtggctatacagaagtcgagttgtcatcgcaaaaatggtgcagattctccatgcatgttctccaacattccacatatggttggatttgggcttgttgaaattctcttatcacaactccaaaactttcacaagttgacttggctctctaagcttgcagccatgatgtcttttgtctatgcaactattggaattggactttctctagctaagatcatatcaggggcggaccagtcgtcatcggaaaaaatttggatgatgtttatagcagccggagatattgcatttgcttgctcgtattctcttatcctgtttgatatccaagacacactgaagtcatcgccaccagagaacaaagtgatgaagagggctgtcgttatagggggtttgactatggcattactcttcatgatgtgtggtagcttgggttatgctgcgtttggcaacatcacacccgaaaacctgcttgctggttttggagatgagatgccctgggcattctggctcctggatttggctaatttttgcattgtggtgcacatagttggtgcatttcaggtactgtgccaaccagtgtttcgcattgtcgaactgttggctagaagaaggtggccaaaatccaatttcattaccaaagagaacctggtcatactagggaagatgaagttcaatataaacatgtttaggctgacatggagaacatcctttgtggtgctggtgactgtcattgccatggcaatgccattcttcacagatatgctggctcttctcggagctatcgggtactggcctcttatagtttgtgccccaatagagatgcacattgtgcaaaacaagattcagaaacaaacccttcgctggttcgggctccaactcctgagctttttgtgcttgcttctttccttggccgcggcatctggttccatttatggtctgcataagggtctcggtgcgtacaagctcttccaagttaaagtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

497

Amino Acids

54.69

Weight (kDa)

8.61

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 984
AccII CGCG 1 cut(s) 1424
AccIII TCCGGA 1 cut(s) 304
AciI CCGC 4 cut(s) 504, 740, 1422, 1424
AcoI YGGCCR 2 cut(s) 1124, 1419
AcsI RAATTY 3 cut(s) 26, 615, 762
AcuI CTGAAG 1 cut(s) 866
AdeI CACNNNGTG 1 cut(s) 1339
AfaI GTAC 4 cut(s) 74, 1074, 1298, 1469
AfiI CCNNNNNNNGG 3 cut(s) 317, 1027, 1371
AflIII ACRYGT 1 cut(s) 1191
AgsI TTSAA 6 cut(s) 32, 58, 383, 466, 614, 1183
AhdI GACNNNNNGTC 2 cut(s) 313, 748
AjnI CCWGG 4 cut(s) 197, 1004, 1020, 1155
AjuI GAANNNNNNNTTGG 2 cut(s) 1074, 1106
AluBI AGCT 9 cut(s) 83, 179, 513, 667, 722, 936, 1289, 1395, 1474
AluI AGCT 9 cut(s) 83, 179, 513, 667, 722, 936, 1289, 1395, 1474
Alw21I GWGCWC 1 cut(s) 1053
Alw26I GTCTC 1 cut(s) 1463
Alw44I GTGCAC 1 cut(s) 1049
AlwNI CAGNNNCTG 1 cut(s) 1075
Aor13HI TCCGGA 1 cut(s) 304
AoxI GGCC 4 cut(s) 207, 1124, 1301, 1419
ApaLI GTGCAC 1 cut(s) 1049
ApeKI GCWGC 4 cut(s) 260, 671, 782, 947
ApoI RAATTY 3 cut(s) 26, 615, 762
AspS9I GGNCC 3 cut(s) 208, 307, 742
AsuHPI GGTGA 1 cut(s) 1243
AvaII GGWCC 2 cut(s) 307, 742
BaeGI GKGCMC 3 cut(s) 154, 1053, 1321
BalI TGGCCA 1 cut(s) 1126
BanII GRGCYC 1 cut(s) 1383
BarI GAAGNNNNNNTAC 2 cut(s) 1460, 1492
Bbv12I GWGCWC 1 cut(s) 1053
BbvI GCAGC 4 cut(s) 247, 683, 794, 934
BccI CCATC 3 cut(s) 104, 213, 444
BciT130I CCWGG 4 cut(s) 199, 1006, 1022, 1157
BcoDI GTCTC 1 cut(s) 1463
BfaI CTAG 5 cut(s) 194, 422, 719, 1113, 1166
BfmI CTRYAG 1 cut(s) 95
BfuAI ACCTGC 1 cut(s) 984
BisI GCNGC 6 cut(s) 261, 672, 783, 948, 1422, 1425
BlsI GCNGC 6 cut(s) 262, 673, 784, 949, 1423, 1426
Bme1390I CCNGG 4 cut(s) 199, 1006, 1022, 1157
Bme18I GGWCC 2 cut(s) 307, 742
BmeRI GACNNNNNGTC 2 cut(s) 313, 748
BmgT120I GGNCC 3 cut(s) 208, 307, 742
BmiI GGNNCC 4 cut(s) 309, 1019, 1382, 1435
BmrFI CCNGG 4 cut(s) 199, 1006, 1022, 1157
BmrI ACTGGG 1 cut(s) 305
BmsI GCATC 4 cut(s) 176, 990, 1320, 1436
BmuI ACTGGG 1 cut(s) 305
BpmI CTGGAG 2 cut(s) 105, 201
Bpu10I CCTNAGC 1 cut(s) 1391
BsaI GGTCTC 1 cut(s) 1463
BsaJI CCNNGG 6 cut(s) 198, 1004, 1005, 1245, 1416, 1422
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 168, 198
Bsc4I CCNNNNNNNGG 3 cut(s) 317, 1027, 1371
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 5 cut(s) 133, 311, 745, 1085, 1304
Bse3DI GCAATG 3 cut(s) 210, 1239, 1257
BseAI TCCGGA 1 cut(s) 304
BseBI CCWGG 4 cut(s) 199, 1006, 1022, 1157
BseDI CCNNGG 6 cut(s) 198, 1004, 1005, 1245, 1416, 1422
BseGI GGATG 6 cut(s) 109, 224, 455, 459, 774, 1214
BseLI CCNNNNNNNGG 3 cut(s) 317, 1027, 1371
BseMI GCAATG 3 cut(s) 210, 1239, 1257
BseMII CTCAG 1 cut(s) 1382
BseNI ACTGG 5 cut(s) 133, 311, 745, 1085, 1304
BseSI GKGCMC 3 cut(s) 154, 1053, 1321
BseXI GCAGC 4 cut(s) 247, 683, 794, 934
BsgI GTGCAG 2 cut(s) 235, 576
Bsh1236I CGCG 1 cut(s) 1424
BshFI GGCC 4 cut(s) 209, 1126, 1303, 1421
BsiHKAI GWGCWC 1 cut(s) 1053
BsiSI CCGG 4 cut(s) 65, 228, 305, 786
BslI CCNNNNNNNGG 3 cut(s) 317, 1027, 1371
BsmAI GTCTC 1 cut(s) 1463
BsmI GAATGC 1 cut(s) 1010
BsnI GGCC 4 cut(s) 209, 1126, 1303, 1421
Bso31I GGTCTC 1 cut(s) 1463
Bsp1286I GDGCHC 4 cut(s) 154, 1053, 1321, 1383
Bsp13I TCCGGA 1 cut(s) 304
Bsp143I GATC 2 cut(s) 418, 726
Bsp19I CCATGG 1 cut(s) 1245
BspACI CCGC 4 cut(s) 504, 740, 1422, 1424
BspANI GGCC 4 cut(s) 209, 1126, 1303, 1421
BspCNI CTCAG 1 cut(s) 1383
BspEI TCCGGA 1 cut(s) 304
BspFNI CGCG 1 cut(s) 1424
BspHI TCATGA 1 cut(s) 921
BspLI GGNNCC 4 cut(s) 309, 1019, 1382, 1435
BspMI ACCTGC 1 cut(s) 984
BspQI GCTCTTC 2 cut(s) 1284, 1481
BspTNI GGTCTC 1 cut(s) 1463
BsrDI GCAATG 3 cut(s) 210, 1239, 1257
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 5 cut(s) 133, 311, 745, 1085, 1304
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 6 cut(s) 198, 1004, 1005, 1245, 1416, 1422
BssMI GATC 2 cut(s) 418, 726
BssT1I CCWWGG 2 cut(s) 1245, 1416
Bst2UI CCWGG 4 cut(s) 199, 1006, 1022, 1157
Bst4CI ACNGT 4 cut(s) 136, 1077, 1107, 1237
Bst6I CTCTTC 4 cut(s) 872, 923, 1284, 1481
BstAPI GCANNNNNTGC 1 cut(s) 1339
BstC8I GCNNGC 8 cut(s) 225, 229, 265, 669, 805, 981, 1275, 1406
BstDEI CTNAG 4 cut(s) 283, 663, 723, 1391
BstDSI CCRYGG 2 cut(s) 1245, 1422
BstF5I GGATG 6 cut(s) 109, 224, 455, 459, 774, 1214
BstFNI CGCG 1 cut(s) 1424
BstKTI GATC 2 cut(s) 421, 729
BstMAI GTCTC 1 cut(s) 1463
BstMBI GATC 2 cut(s) 418, 726
BstMWI GCNNNNNNNGC 4 cut(s) 269, 664, 1339, 1401
BstNI CCWGG 4 cut(s) 199, 1006, 1022, 1157
BstNSI RCATGY 2 cut(s) 574, 1195
BstSCI CCNGG 4 cut(s) 197, 1004, 1020, 1155
BstSFI CTRYAG 1 cut(s) 95
BstSLI GKGCMC 3 cut(s) 154, 1053, 1321
BstUI CGCG 1 cut(s) 1424
BstV1I GCAGC 4 cut(s) 247, 683, 794, 934
BsuRI GGCC 4 cut(s) 209, 1126, 1303, 1421
BtgI CCRYGG 2 cut(s) 1245, 1422
BtgZI GCGATG 2 cut(s) 527, 837
BtsCI GGATG 6 cut(s) 109, 224, 455, 459, 774, 1214
BtsIMutI CAGTG 3 cut(s) 318, 842, 1092
BveI ACCTGC 1 cut(s) 984
Cac8I GCNNGC 8 cut(s) 225, 229, 265, 669, 805, 981, 1275, 1406
CaiI CAGNNNCTG 1 cut(s) 1075
CciI TCATGA 1 cut(s) 921
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 3 cut(s) 208, 307, 742
Cfr42I CCGCGG 1 cut(s) 1425
CsiI ACCWGGT 1 cut(s) 1155
Csp6I GTAC 4 cut(s) 73, 1073, 1297, 1468
CspCI CAANNNNNGTGG 2 cut(s) 427, 462
CviAII CATG 8 cut(s) 35, 567, 571, 676, 922, 1192, 1206, 1246
CviQI GTAC 4 cut(s) 73, 1073, 1297, 1468
DdeI CTNAG 4 cut(s) 283, 663, 723, 1391
DpnI GATC 2 cut(s) 420, 728
DpnII GATC 2 cut(s) 418, 726
DraIII CACNNNGTG 1 cut(s) 1339
DriI GACNNNNNGTC 2 cut(s) 313, 748
EaeI YGGCCR 2 cut(s) 1124, 1419
Eam1104I CTCTTC 4 cut(s) 872, 923, 1284, 1481
Eam1105I GACNNNNNGTC 2 cut(s) 313, 748
EarI CTCTTC 4 cut(s) 872, 923, 1284, 1481
EciI GGCGGA 1 cut(s) 755
Eco130I CCWWGG 2 cut(s) 1245, 1416
Eco24I GRGCYC 1 cut(s) 1383
Eco31I GGTCTC 1 cut(s) 1463
Eco32I GATATC 1 cut(s) 832
Eco47I GGWCC 2 cut(s) 307, 742
Eco57I CTGAAG 1 cut(s) 866
EcoRII CCWGG 4 cut(s) 197, 1004, 1020, 1155
EcoRV GATATC 1 cut(s) 832
EcoT14I CCWWGG 2 cut(s) 1245, 1416
EcoT22I ATGCAT 1 cut(s) 572
EcoT38I GRGCYC 1 cut(s) 1383
ErhI CCWWGG 2 cut(s) 1245, 1416
FaeI CATG 8 cut(s) 38, 570, 574, 679, 925, 1195, 1209, 1249
FalI AAGNNNNNCTT 2 cut(s) 390, 422
FatI CATG 8 cut(s) 34, 566, 570, 675, 921, 1191, 1205, 1245
FauNDI CATATG 1 cut(s) 591
Fnu4HI GCNGC 6 cut(s) 261, 672, 783, 948, 1422, 1425
FokI GGATG 6 cut(s) 116, 231, 462, 466, 781, 1201
FriOI GRGCYC 1 cut(s) 1383
Fsp4HI GCNGC 6 cut(s) 261, 672, 783, 948, 1422, 1425
FspBI CTAG 5 cut(s) 194, 422, 719, 1113, 1166
GluI GCNGC 6 cut(s) 261, 672, 783, 948, 1422, 1425
GsuI CTGGAG 2 cut(s) 105, 201
HaeIII GGCC 4 cut(s) 209, 1126, 1303, 1421
HapII CCGG 4 cut(s) 65, 228, 305, 786
Hin1II CATG 8 cut(s) 38, 570, 574, 679, 925, 1195, 1209, 1249
HincII GTYRAC 1 cut(s) 651
HindII GTYRAC 1 cut(s) 651
HindIII AAGCTT 2 cut(s) 511, 665
HinfI GANTC 3 cut(s) 47, 560, 1351
HpaII CCGG 4 cut(s) 65, 228, 305, 786
HphI GGTGA 1 cut(s) 1243
Hpy166II GTNNAC 2 cut(s) 651, 1051
Hpy188I TCNGA 5 cut(s) 46, 218, 757, 1286, 1356
Hpy188III TCNNGA 3 cut(s) 305, 922, 1390
Hpy8I GTNNAC 2 cut(s) 651, 1051
HpyAV CCTTC 3 cut(s) 265, 1113, 1376
HpyCH4III ACNGT 4 cut(s) 136, 1077, 1107, 1237
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 664, 1339, 1401
HpyF3I CTNAG 4 cut(s) 283, 663, 723, 1391
Hsp92II CATG 8 cut(s) 38, 570, 574, 679, 925, 1195, 1209, 1249
Kpn2I TCCGGA 1 cut(s) 304
KroI GCCGGC 1 cut(s) 227
KroNI GCCGGC 1 cut(s) 229
KspI CCGCGG 1 cut(s) 1425
Kzo9I GATC 2 cut(s) 418, 726
LguI GCTCTTC 2 cut(s) 1284, 1481
LmnI GCTCC 4 cut(s) 176, 1023, 1286, 1386
Lsp1109I GCAGC 4 cut(s) 247, 683, 794, 934
LweI GCATC 4 cut(s) 176, 990, 1320, 1436
MabI ACCWGGT 1 cut(s) 1155
MaeI CTAG 5 cut(s) 194, 422, 719, 1113, 1166
MaeIII GTNAC 2 cut(s) 293, 1231
MalI GATC 2 cut(s) 420, 728
MboI GATC 2 cut(s) 418, 726
MboII GAAGA 8 cut(s) 101, 889, 910, 1128, 1183, 1252, 1271, 1468
MhlI GDGCHC 4 cut(s) 154, 1053, 1321, 1383
MlsI TGGCCA 1 cut(s) 1126
MluCI AATT 7 cut(s) 26, 388, 615, 705, 762, 1033, 1135
MluNI TGGCCA 1 cut(s) 1126
MmeI TCCRAC 4 cut(s) 427, 577, 603, 1408
MnlI CCTC 5 cut(s) 7, 13, 337, 873, 1314
Mox20I TGGCCA 1 cut(s) 1126
Mph1103I ATGCAT 1 cut(s) 572
MroI TCCGGA 1 cut(s) 304
MroNI GCCGGC 1 cut(s) 227
MscI TGGCCA 1 cut(s) 1126
MseI TTAA 2 cut(s) 387, 1485
MslI CAYNNNNRTG 4 cut(s) 1046, 1244, 1250, 1268
Msp20I TGGCCA 1 cut(s) 1126
MspA1I CMGCKG 1 cut(s) 1424
MspI CCGG 4 cut(s) 65, 228, 305, 786
MspR9I CCNGG 4 cut(s) 199, 1006, 1022, 1157
Mva1269I GAATGC 1 cut(s) 1010
MvaI CCWGG 4 cut(s) 199, 1006, 1022, 1157
MvnI CGCG 1 cut(s) 1424
MwoI GCNNNNNNNGC 4 cut(s) 269, 664, 1339, 1401
NaeI GCCGGC 1 cut(s) 229
NcoI CCATGG 1 cut(s) 1245
NdeI CATATG 1 cut(s) 591
NdeII GATC 2 cut(s) 418, 726
NgoMIV GCCGGC 1 cut(s) 227
NlaIII CATG 8 cut(s) 38, 570, 574, 679, 925, 1195, 1209, 1249
NlaIV GGNNCC 4 cut(s) 309, 1019, 1382, 1435
NmuCI GTSAC 1 cut(s) 1231
NsiI ATGCAT 1 cut(s) 572
NspI RCATGY 2 cut(s) 574, 1195
PagI TCATGA 1 cut(s) 921
PasI CCCWGGG 1 cut(s) 1005
PciI ACATGT 1 cut(s) 1191
PciSI GCTCTTC 2 cut(s) 1284, 1481
PctI GAATGC 1 cut(s) 1010
PdiI GCCGGC 1 cut(s) 229
PfeI GAWTC 3 cut(s) 47, 560, 1351
PfoI TCCNGGA 1 cut(s) 1020
PkrI GCNGC 6 cut(s) 262, 673, 784, 949, 1423, 1426
PscI ACATGT 1 cut(s) 1191
Psp6I CCWGG 4 cut(s) 197, 1004, 1020, 1155
PspGI CCWGG 4 cut(s) 197, 1004, 1020, 1155
PspN4I GGNNCC 4 cut(s) 309, 1019, 1382, 1435
PspPI GGNCC 3 cut(s) 208, 307, 742
PstNI CAGNNNCTG 1 cut(s) 1075
RsaI GTAC 4 cut(s) 74, 1074, 1298, 1469
RsaNI GTAC 4 cut(s) 73, 1073, 1297, 1468
RseI CAYNNNNRTG 4 cut(s) 1046, 1244, 1250, 1268
SacII CCGCGG 1 cut(s) 1425
SapI GCTCTTC 2 cut(s) 1284, 1481
SaqAI TTAA 2 cut(s) 387, 1485
SatI GCNGC 6 cut(s) 261, 672, 783, 948, 1422, 1425
Sau3AI GATC 2 cut(s) 418, 726
Sau96I GGNCC 3 cut(s) 208, 307, 742
ScrFI CCNGG 4 cut(s) 199, 1006, 1022, 1157
SduI GDGCHC 4 cut(s) 154, 1053, 1321, 1383
SexAI ACCWGGT 1 cut(s) 1155
SfaNI GCATC 4 cut(s) 176, 990, 1320, 1436
SfcI CTRYAG 1 cut(s) 95
Sfr303I CCGCGG 1 cut(s) 1425
SgrBI CCGCGG 1 cut(s) 1425
SinI GGWCC 2 cut(s) 307, 742
SmiMI CAYNNNNRTG 4 cut(s) 1046, 1244, 1250, 1268
Sse9I AATT 7 cut(s) 26, 388, 615, 705, 762, 1033, 1135
SsiI CCGC 4 cut(s) 504, 740, 1422, 1424
SspMI CTAG 5 cut(s) 194, 422, 719, 1113, 1166
StyD4I CCNGG 4 cut(s) 197, 1004, 1020, 1155
StyI CCWWGG 2 cut(s) 1245, 1416
TaaI ACNGT 4 cut(s) 136, 1077, 1107, 1237
TaqI TCGA 3 cut(s) 417, 533, 1101
TasI AATT 7 cut(s) 26, 388, 615, 705, 762, 1033, 1135
TauI GCSGC 2 cut(s) 1424, 1427
TfiI GAWTC 3 cut(s) 47, 560, 1351
Tru1I TTAA 2 cut(s) 387, 1485
Tru9I TTAA 2 cut(s) 387, 1485
TscAI CASTG 3 cut(s) 318, 849, 1092
TseFI GTSAC 1 cut(s) 1231
TseI GCWGC 4 cut(s) 260, 671, 782, 947
Tsp45I GTSAC 1 cut(s) 1231
TspDTI ATGAA 5 cut(s) 226, 890, 910, 1129, 1190
TspRI CASTG 3 cut(s) 318, 849, 1092
VneI GTGCAC 1 cut(s) 1049
VpaK11BI GGWCC 2 cut(s) 307, 742
XapI RAATTY 3 cut(s) 26, 615, 762
XceI RCATGY 2 cut(s) 574, 1195
XcmI CCANNNNNNNNNTGG 1 cut(s) 1153
XspI CTAG 5 cut(s) 194, 422, 719, 1113, 1166
Zsp2I ATGCAT 1 cut(s) 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.