Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005891.1

Orthogroup ID

OG0002947

Physical Location & Seq

Genomic Coordinates Reverse (-)

67413 .. 72550

Gene Structure 5138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

atgggagagatcgcggctattgtcgggctttgtggggttgtcgtggcagcgtggctaggttccgattggcagcagggtttactccgatctagaatgtccatgatggtccggcgaatttggggttgtggggcggcgacgactgtagcttggatggcggcggcagtttctcctagttcatgtgtggtggagtgggcttgggcttgggccctctttttggtcccaacttgtgctaggttcttattttctgtttttattgttgattatgttagttgggccccgcccccgcatcatccgattactcaccccatccatcatccaatcactcacccaatcagaaaaggccacaccatagtaaacgggggtttgatcctcgccgaatcggtgatggtctcaggagacgacttggcgtccgccttctgcgacggccagttctggcagccggggtttcggttccatcccaccgacgaggaactcgtcctctactatctcaagcggaagatctgcaagaagaggctcaagcttaacgtcatcgccgagaccgacgtctataagtgggaccctgaggaacttcctggtttgtctttattgaaaactggagacaggcaatggttctttttcagtccgagagatcggaggtaccctaatggggggagatcaaacagggcaaccagacatgggtattggaaagctactggaaaggatcgcaacatttcctgttataaccgatcagttggactgaagaagaccttagttttctataaaggccgtgcacctactggggagcgcactgattgggtgatgcatgagtataccttggatgaggaggagttaaagagatgccagaatgtacaggaatattatgctctttacaaagttttcaagaaaagtggacctggtcctaaaaatggtgagcaatatggggcgccatttagagaagaagattgggctgatgatgaatgcccgataataaatagctctgctgatagggaaatctcagttgagcaagttggagagctggctgctaattataatgtgaaaccttttggagaaattccattgaagcaagttgaagagattactgctaatggttatgtgaatgttaacagcgaagtccattctacaatagatgacttggaacggttcatgaaacagattgctgatgacgctgtgcttgacgacccgcaacagtttaatgatcatgttcacaccctatctcaggttgttagcgaagaagaaacacaaagtactgtggtggatctgtactccagtgaagttaaatgcccacaatcaattacaacttttgatccaagtggtcagcagggcaatgcacatgcatgctttgacttcacacagtcagctacttcacagatgcaactgtacgaggcatctgaagcatctgcttctgactttcatcagccggagcctttcactcccatactacgtgaagaggacttcctggagatggatgatctcctgggtcctcaacctactgtttcaaacactgggaattccgggggtaacttccagtttgatgagttggatggatttgatatgttccatgatgcggccatgtttttcaatgacatggggcccattgaacaaggcactgtttctcatcaattcatgaattcaatggagggtaatattgtaaaccagtttgattaccagatacaaccagcacctccaattcagatcaaccatcagctgaatcaagagtcaactcagatgaacaatcagctatgggcacagaatgaaaggcaagatctctatacttcagcagaatcaaagcaggggtctggacctcaattcaactcaggtgtggtatacgattcgtcaaatcatcctccacaagcaaatcaaaatcaaagcggcaatgaagctgccagtgttactagtcagttttcttctgccctatggtcttttgtggagtctatacctactactcctgcatctgcatcagagaatgccttggtgagtcgggcctttgaacggatgaatagctttagcaggatgagaataattgcgaggagcgcaaatgtccctgcaggtaatgattctgaaactaggggatcccgaaagaggggattcttcttcattccagttcttgtggcactatgtgctattttttgggtcttgatggcatctctcaggcaatgggggagatgcatctcctcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

725

Amino Acids

81.41

Weight (kDa)

5.16

Isoelectric Point (pI)

42.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	147 - 272	3.9e-46	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34180 AT1G34180 AT1G34180 AT1G34180 AT1G34190
fragaria_vesca	FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_6g07970
malus_domestica	MD05G1037700.v1.1 MD10G1041500.v1.1
prunus_persica	Prupe.8G045800_v2.0.a1 Prupe.8G045800_v2.0.a1
pyrus_communis	pycom05g02790 pycom10g02860
rosa_chinensis	RchiOBHm_Chr3g0457681 RchiOBHm_Chr6g0273431
rosa_laevigata	RLG00000013619 RLG00000025196
rosa_multiflora	Rmu_co8212274.1_g000001 Rmu_sc0005891.1_g000016 Rmu_sc0007395.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421580 Rroxscaffold_7G00195380
rosa_rugosa	Rorug03G0022500 Rorug06G0074700
rosa_samantha	Rh3AG083200 Rh3BG085700 Rh3CG086000 Rh3DG086600 Rh6AG189800 Rh6BG193300 Rh6CG193000 Rh6DG184500
rosa_wichuraiana	Rw3G007120 Rw6G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	720, 1029
AatII	GACGTC	1 cut(s)	546
Acc36I	ACCTGC	1 cut(s)	2036
Acc65I	GGTACC	1 cut(s)	636
AccB1I	GGYRCC	2 cut(s)	636, 922
AccI	GTMKAC	2 cut(s)	809, 1824
AccII	CGCG	1 cut(s)	14
AclWI	GGATC	6 cut(s)	361, 708, 1263, 1298, 2064, 2077
AcoI	YGGCCR	2 cut(s)	424, 1566
AcsI	RAATTY	4 cut(s)	114, 1050, 1507, 1627
AcuI	CTGAAG	3 cut(s)	758, 1410, 1758
AcyI	GRCGYC	3 cut(s)	407, 543, 923
AdeI	CACNNNGTG	1 cut(s)	2117
AfaI	GTAC	5 cut(s)	638, 849, 1246, 1262, 1379
AhdI	GACNNNNNGTC	1 cut(s)	406
AhlI	ACTAGT	1 cut(s)	1892
AjnI	CCWGG	4 cut(s)	571, 892, 1455, 1473
Alw21I	GWGCWC	1 cut(s)	772
Alw26I	GTCTC	4 cut(s)	390, 394, 530, 591
Alw44I	GTGCAC	1 cut(s)	768
AlwI	GGATC	6 cut(s)	361, 708, 1263, 1298, 2064, 2077
AoxI	GGCC	8 cut(s)	204, 273, 340, 424, 763, 1566, 1589, 1980
ApaI	GGGCCC	3 cut(s)	208, 277, 1593
ApaLI	GTGCAC	1 cut(s)	768
ApeKI	GCWGC	5 cut(s)	47, 70, 436, 1019, 1880
ApoI	RAATTY	4 cut(s)	114, 1050, 1507, 1627
ArsI	GACNNNNNNTTYG	2 cut(s)	1778, 1810
Asp718I	GGTACC	1 cut(s)	636
AspLEI	GCGC	3 cut(s)	786, 925, 2033
AsuC2I	CCSGG	2 cut(s)	441, 1513
AsuHPI	GGTGA	6 cut(s)	293, 317, 394, 808, 920, 1984
AvaII	GGWCC	7 cut(s)	106, 217, 556, 890, 896, 1478, 1799
AxyI	CCTNAGG	1 cut(s)	561
BaeGI	GKGCMC	5 cut(s)	208, 277, 772, 1593, 1747
BamHI	GGATCC	1 cut(s)	2069
BanI	GGYRCC	2 cut(s)	636, 922
BanII	GRGCYC	3 cut(s)	208, 277, 1593
BbsI	GAAGAC	1 cut(s)	749
Bbv12I	GWGCWC	1 cut(s)	772
BbvI	GCAGC	5 cut(s)	59, 82, 448, 1006, 1867
BceAI	ACGGC	2 cut(s)	439, 750
BciT130I	CCWGG	4 cut(s)	573, 894, 1457, 1475
BclI	TGATCA	1 cut(s)	1195
BcnI	CCSGG	2 cut(s)	441, 1513
BcoDI	GTCTC	4 cut(s)	390, 394, 530, 591
BcuI	ACTAGT	1 cut(s)	1892
BfaI	CTAG	6 cut(s)	56, 90, 171, 231, 1893, 2064
BfmI	CTRYAG	2 cut(s)	141, 2043
BfoI	RGCGCY	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	2036
BglII	AGATCT	2 cut(s)	498, 1762
BmcAI	AGTACT	1 cut(s)	1246
Bme1390I	CCNGG	6 cut(s)	441, 573, 894, 1457, 1475, 1513
Bme18I	GGWCC	7 cut(s)	106, 217, 556, 890, 896, 1478, 1799
BmeRI	GACNNNNNGTC	1 cut(s)	406
BmrFI	CCNGG	6 cut(s)	441, 573, 894, 1457, 1475, 1513
BmrI	ACTGGG	2 cut(s)	786, 1512
BmuI	ACTGGG	2 cut(s)	786, 1512
BoxI	GACNNNNGTC	1 cut(s)	542
BpiI	GAAGAC	1 cut(s)	749
BpmI	CTGGAG	3 cut(s)	615, 1249, 1478
BpuEI	CTTGAG	2 cut(s)	473, 500
BpuMI	CCSGG	2 cut(s)	441, 1513
BsaAI	YACGTR	1 cut(s)	1442
BsaHI	GRCGYC	3 cut(s)	407, 543, 923
BsaI	GGTCTC	2 cut(s)	394, 530
BsaJI	CCNNGG	5 cut(s)	440, 813, 1474, 1512, 1968
Bse21I	CCTNAGG	1 cut(s)	561
Bse3DI	GCAATG	4 cut(s)	611, 1330, 1879, 2159
BseBI	CCWGG	4 cut(s)	573, 894, 1457, 1475
BseDI	CCNNGG	5 cut(s)	440, 813, 1474, 1512, 1968
BseMI	GCAATG	4 cut(s)	611, 1330, 1879, 2159
BseMII	CTCAG	7 cut(s)	405, 552, 1008, 1229, 1736, 1827, 2161
BseRI	GAGGAG	4 cut(s)	836, 839, 2041, 2161
BseSI	GKGCMC	5 cut(s)	208, 277, 772, 1593, 1747
BseXI	GCAGC	5 cut(s)	59, 82, 448, 1006, 1867
Bsh1236I	CGCG	1 cut(s)	14
BshFI	GGCC	8 cut(s)	206, 275, 342, 426, 765, 1568, 1591, 1982
BshNI	GGYRCC	2 cut(s)	636, 922
BsiHKAI	GWGCWC	1 cut(s)	772
BsiSI	CCGG	4 cut(s)	109, 440, 1418, 1512
BslFI	GGGAC	3 cut(s)	203, 569, 2024
BsmAI	GTCTC	4 cut(s)	390, 394, 530, 591
BsmBI	CGTCTC	1 cut(s)	390
BsmFI	GGGAC	3 cut(s)	203, 569, 2024
BsmI	GAATGC	2 cut(s)	962, 1969
BsnI	GGCC	8 cut(s)	206, 275, 342, 426, 765, 1568, 1591, 1982
Bso31I	GGTCTC	2 cut(s)	394, 530
Bsp120I	GGGCCC	3 cut(s)	204, 273, 1589
Bsp1286I	GDGCHC	5 cut(s)	208, 277, 772, 1593, 1747
Bsp1407I	TGTACA	1 cut(s)	847
BspANI	GGCC	8 cut(s)	206, 275, 342, 426, 765, 1568, 1591, 1982
BspCNI	CTCAG	7 cut(s)	404, 553, 1007, 1228, 1735, 1826, 2160
BspFNI	CGCG	1 cut(s)	14
BspHI	TCATGA	3 cut(s)	1143, 1623, 2174
BspMAI	CTGCAG	1 cut(s)	2047
BspMI	ACCTGC	1 cut(s)	2036
BspPI	GGATC	6 cut(s)	361, 708, 1263, 1298, 2064, 2077
BspT107I	GGYRCC	2 cut(s)	636, 922
BspTNI	GGTCTC	2 cut(s)	394, 530
BsrDI	GCAATG	4 cut(s)	611, 1330, 1879, 2159
BsrGI	TGTACA	1 cut(s)	847
BssECI	CCNNGG	5 cut(s)	440, 813, 1474, 1512, 1968
BssNAI	GTATAC	2 cut(s)	810, 1825
BssNI	GRCGYC	3 cut(s)	407, 543, 923
BssT1I	CCWWGG	2 cut(s)	813, 1968
Bst1107I	GTATAC	2 cut(s)	810, 1825
Bst2UI	CCWGG	4 cut(s)	573, 894, 1457, 1475
Bst4CI	ACNGT	8 cut(s)	142, 1140, 1188, 1249, 1353, 1377, 1492, 1609
Bst6I	CTCTTC	3 cut(s)	503, 1065, 1440
BstACI	GRCGYC	3 cut(s)	407, 543, 923
BstAPI	GCANNNNNTGC	1 cut(s)	2117
BstAUI	TGTACA	1 cut(s)	847
BstBAI	YACGTR	1 cut(s)	1442
BstC8I	GCNNGC	2 cut(s)	1017, 1336
BstDEI	CTNAG	8 cut(s)	391, 561, 748, 994, 1215, 1722, 1813, 2147
BstENI	CCTNNNNNAGG	1 cut(s)	1214
BstFNI	CGCG	1 cut(s)	14
BstH2I	RGCGCY	1 cut(s)	926
BstHHI	GCGC	3 cut(s)	786, 925, 2033
BstMAI	GTCTC	4 cut(s)	390, 394, 530, 591
BstMWI	GCNNNNNNNGC	5 cut(s)	152, 1163, 1391, 2030, 2117
BstNI	CCWGG	4 cut(s)	573, 894, 1457, 1475
BstNSI	RCATGY	2 cut(s)	1334, 1338
BstPAI	GACNNNNGTC	1 cut(s)	542
BstSCI	CCNGG	6 cut(s)	439, 571, 892, 1455, 1473, 1511
BstSFI	CTRYAG	2 cut(s)	141, 2043
BstSLI	GKGCMC	5 cut(s)	208, 277, 772, 1593, 1747
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	5 cut(s)	59, 82, 448, 1006, 1867
BstV2I	GAAGAC	1 cut(s)	749
BstX2I	RGATCY	4 cut(s)	498, 1255, 1762, 2069
BstYI	RGATCY	4 cut(s)	498, 1255, 1762, 2069
BstZ17I	GTATAC	2 cut(s)	810, 1825
Bsu36I	CCTNAGG	1 cut(s)	561
BsuRI	GGCC	8 cut(s)	206, 275, 342, 426, 765, 1568, 1591, 1982
BtgZI	GCGATG	1 cut(s)	514
BtsIMutI	CAGTG	5 cut(s)	786, 1273, 1500, 1605, 1891
BveI	ACCTGC	1 cut(s)	2036
Cac8I	GCNNGC	2 cut(s)	1017, 1336
CciI	TCATGA	3 cut(s)	1143, 1623, 2174
CfoI	GCGC	3 cut(s)	786, 925, 2033
CseI	GACGC	2 cut(s)	396, 1172
CsiI	ACCWGGT	1 cut(s)	892
Csp6I	GTAC	5 cut(s)	637, 848, 1245, 1261, 1378
CspCI	CAANNNNNGTGG	2 cut(s)	868, 903
CviQI	GTAC	5 cut(s)	637, 848, 1245, 1261, 1378
DdeI	CTNAG	8 cut(s)	391, 561, 748, 994, 1215, 1722, 1813, 2147
DinI	GGCGCC	1 cut(s)	924
DraIII	CACNNNGTG	1 cut(s)	2117
DriI	GACNNNNNGTC	1 cut(s)	406
EaeI	YGGCCR	2 cut(s)	424, 1566
Eam1104I	CTCTTC	3 cut(s)	503, 1065, 1440
Eam1105I	GACNNNNNGTC	1 cut(s)	406
EarI	CTCTTC	3 cut(s)	503, 1065, 1440
EciI	GGCGGA	1 cut(s)	400
Eco130I	CCWWGG	2 cut(s)	813, 1968
Eco24I	GRGCYC	3 cut(s)	208, 277, 1593
Eco31I	GGTCTC	2 cut(s)	394, 530
Eco47I	GGWCC	7 cut(s)	106, 217, 556, 890, 896, 1478, 1799
Eco57I	CTGAAG	3 cut(s)	758, 1410, 1758
Eco81I	CCTNAGG	1 cut(s)	561
EcoNI	CCTNNNNNAGG	1 cut(s)	1214
EcoO109I	RGGNCCY	5 cut(s)	205, 274, 556, 1478, 1589
EcoRI	GAATTC	2 cut(s)	1507, 1627
EcoRII	CCWGG	4 cut(s)	571, 892, 1455, 1473
EcoT14I	CCWWGG	2 cut(s)	813, 1968
EcoT22I	ATGCAT	3 cut(s)	804, 1336, 2168
EcoT38I	GRGCYC	3 cut(s)	208, 277, 1593
EgeI	GGCGCC	1 cut(s)	924
EheI	GGCGCC	1 cut(s)	924
ErhI	CCWWGG	2 cut(s)	813, 1968
Esp3I	CGTCTC	1 cut(s)	390
FalI	AAGNNNNNCTT	2 cut(s)	731, 763
FaqI	GGGAC	3 cut(s)	203, 569, 2024
FauI	CCCGC	3 cut(s)	285, 291, 1188
FbaI	TGATCA	1 cut(s)	1195
FblI	GTMKAC	2 cut(s)	809, 1824
FriOI	GRGCYC	3 cut(s)	208, 277, 1593
FspBI	CTAG	6 cut(s)	56, 90, 171, 231, 1893, 2064
GlaI	GCGC	3 cut(s)	785, 924, 2032
GsuI	CTGGAG	3 cut(s)	615, 1249, 1478
HaeII	RGCGCY	1 cut(s)	926
HaeIII	GGCC	8 cut(s)	206, 275, 342, 426, 765, 1568, 1591, 1982
HapII	CCGG	4 cut(s)	109, 440, 1418, 1512
HgaI	GACGC	2 cut(s)	396, 1172
HhaI	GCGC	3 cut(s)	786, 925, 2033
Hin1I	GRCGYC	3 cut(s)	407, 543, 923
Hin6I	GCGC	3 cut(s)	784, 923, 2031
HinP1I	GCGC	3 cut(s)	784, 923, 2031
HincII	GTYRAC	2 cut(s)	1102, 1719
HindII	GTYRAC	2 cut(s)	1102, 1719
HindIII	AAGCTT	1 cut(s)	518
HinfI	GANTC	9 cut(s)	377, 1708, 1715, 1781, 1829, 1928, 1975, 2054, 2085
HpaI	GTTAAC	1 cut(s)	1102
HpaII	CCGG	4 cut(s)	109, 440, 1418, 1512
HphI	GGTGA	6 cut(s)	293, 317, 394, 808, 920, 1984
Hpy99I	CGWCG	4 cut(s)	139, 425, 467, 545
HpyAV	CCTTC	1 cut(s)	424
HpyCH4III	ACNGT	8 cut(s)	142, 1140, 1188, 1249, 1353, 1377, 1492, 1609
HpyCH4IV	ACGT	3 cut(s)	525, 543, 1441
HpyF10VI	GCNNNNNNNGC	5 cut(s)	152, 1163, 1391, 2030, 2117
HpyF3I	CTNAG	8 cut(s)	391, 561, 748, 994, 1215, 1722, 1813, 2147
HpySE526I	ACGT	3 cut(s)	525, 543, 1441
Hsp92I	GRCGYC	3 cut(s)	407, 543, 923
HspAI	GCGC	3 cut(s)	784, 923, 2031
KasI	GGCGCC	1 cut(s)	922
KflI	GGGWCCC	1 cut(s)	556
KpnI	GGTACC	1 cut(s)	640
Ksp22I	TGATCA	1 cut(s)	1195
KspAI	GTTAAC	1 cut(s)	1102
LmnI	GCTCC	3 cut(s)	781, 1420, 2028
Lsp1109I	GCAGC	5 cut(s)	59, 82, 448, 1006, 1867
MabI	ACCWGGT	1 cut(s)	892
MaeI	CTAG	6 cut(s)	56, 90, 171, 231, 1893, 2064
MaeII	ACGT	3 cut(s)	525, 543, 1441
MaeIII	GTNAC	2 cut(s)	1517, 1888
MflI	RGATCY	4 cut(s)	498, 1255, 1762, 2069
MhlI	GDGCHC	5 cut(s)	208, 277, 772, 1593, 1747
Mly113I	GGCGCC	1 cut(s)	923
MlyI	GAGTC	3 cut(s)	1724, 1937, 1984
MmeI	TCCRAC	3 cut(s)	712, 988, 1518
Mph1103I	ATGCAT	3 cut(s)	804, 1336, 2168
MseI	TTAA	5 cut(s)	522, 830, 1101, 1191, 1275
MslI	CAYNNNNRTG	1 cut(s)	1333
MspA1I	CMGCKG	1 cut(s)	1705
MspI	CCGG	4 cut(s)	109, 440, 1418, 1512
MspR9I	CCNGG	6 cut(s)	441, 573, 894, 1457, 1475, 1513
Mva1269I	GAATGC	2 cut(s)	962, 1969
MvaI	CCWGG	4 cut(s)	573, 894, 1457, 1475
MvnI	CGCG	1 cut(s)	14
MwoI	GCNNNNNNNGC	5 cut(s)	152, 1163, 1391, 2030, 2117
NarI	GGCGCC	1 cut(s)	923
NciI	CCSGG	2 cut(s)	441, 1513
NmeAIII	GCCGAG	1 cut(s)	559
NsiI	ATGCAT	3 cut(s)	804, 1336, 2168
NspI	RCATGY	2 cut(s)	1334, 1338
PaeI	GCATGC	1 cut(s)	1338
PagI	TCATGA	3 cut(s)	1143, 1623, 2174
PcsI	WCGNNNNNNNCGW	3 cut(s)	471, 531, 537
PctI	GAATGC	2 cut(s)	962, 1969
PfeI	GAWTC	6 cut(s)	377, 1708, 1781, 1829, 2054, 2085
PflFI	GACNNNGTC	1 cut(s)	894
PfoI	TCCNGGA	1 cut(s)	1455
PleI	GAGTC	3 cut(s)	1723, 1936, 1983
PluTI	GGCGCC	1 cut(s)	926
PpsI	GAGTC	3 cut(s)	1723, 1936, 1983
Ppu21I	YACGTR	1 cut(s)	1442
PpuMI	RGGWCCY	2 cut(s)	556, 1478
PshAI	GACNNNNGTC	1 cut(s)	542
PsiI	TTATAA	2 cut(s)	720, 1029
Psp5II	RGGWCCY	2 cut(s)	556, 1478
Psp6I	CCWGG	4 cut(s)	571, 892, 1455, 1473
PspGI	CCWGG	4 cut(s)	571, 892, 1455, 1473
PspOMI	GGGCCC	3 cut(s)	204, 273, 1589
PspPPI	RGGWCCY	2 cut(s)	556, 1478
PstI	CTGCAG	1 cut(s)	2047
PsuI	RGATCY	4 cut(s)	498, 1255, 1762, 2069
PsyI	GACNNNGTC	1 cut(s)	894
PvuII	CAGCTG	1 cut(s)	1705
RsaI	GTAC	5 cut(s)	638, 849, 1246, 1262, 1379
RsaNI	GTAC	5 cut(s)	637, 848, 1245, 1261, 1378
RseI	CAYNNNNRTG	1 cut(s)	1333
SaqAI	TTAA	5 cut(s)	522, 830, 1101, 1191, 1275
SbfI	CCTGCAGG	1 cut(s)	2047
ScaI	AGTACT	1 cut(s)	1246
SchI	GAGTC	3 cut(s)	1724, 1937, 1984
ScrFI	CCNGG	6 cut(s)	441, 573, 894, 1457, 1475, 1513
SdaI	CCTGCAGG	1 cut(s)	2047
SduI	GDGCHC	5 cut(s)	208, 277, 772, 1593, 1747
SexAI	ACCWGGT	1 cut(s)	892
SfcI	CTRYAG	2 cut(s)	141, 2043
SfoI	GGCGCC	1 cut(s)	924
SinI	GGWCC	7 cut(s)	106, 217, 556, 890, 896, 1478, 1799
SmiMI	CAYNNNNRTG	1 cut(s)	1333
SmlI	CTYRAG	2 cut(s)	488, 515
SmoI	CTYRAG	2 cut(s)	488, 515
SpeI	ACTAGT	1 cut(s)	1892
SphI	GCATGC	1 cut(s)	1338
Sse8387I	CCTGCAGG	1 cut(s)	2047
SspDI	GGCGCC	1 cut(s)	922
SspI	AATATT	2 cut(s)	857, 1645
SspMI	CTAG	6 cut(s)	56, 90, 171, 231, 1893, 2064
StyD4I	CCNGG	6 cut(s)	439, 571, 892, 1455, 1473, 1511
StyI	CCWWGG	2 cut(s)	813, 1968
TaaI	ACNGT	8 cut(s)	142, 1140, 1188, 1249, 1353, 1377, 1492, 1609
TaiI	ACGT	3 cut(s)	528, 546, 1444
TaqII	GACCGA	1 cut(s)	554
TatI	WGTACW	3 cut(s)	847, 1244, 1260
TauI	GCSGC	6 cut(s)	17, 134, 158, 161, 1568, 1872
TfiI	GAWTC	6 cut(s)	377, 1708, 1781, 1829, 2054, 2085
Tru1I	TTAA	5 cut(s)	522, 830, 1101, 1191, 1275
Tru9I	TTAA	5 cut(s)	522, 830, 1101, 1191, 1275
TscAI	CASTG	5 cut(s)	793, 1273, 1507, 1612, 1891
TseI	GCWGC	5 cut(s)	47, 70, 436, 1019, 1880
TspGWI	ACGGA	1 cut(s)	2005
TspRI	CASTG	5 cut(s)	793, 1273, 1507, 1612, 1891
Tth111I	GACNNNGTC	1 cut(s)	894
VneI	GTGCAC	1 cut(s)	768
VpaK11BI	GGWCC	7 cut(s)	106, 217, 556, 890, 896, 1478, 1799
XagI	CCTNNNNNAGG	1 cut(s)	1214
XapI	RAATTY	4 cut(s)	114, 1050, 1507, 1627
XbaI	TCTAGA	1 cut(s)	89
XceI	RCATGY	2 cut(s)	1334, 1338
XmiI	GTMKAC	2 cut(s)	809, 1824
XspI	CTAG	6 cut(s)	56, 90, 171, 231, 1893, 2064
ZraI	GACGTC	1 cut(s)	544
ZrmI	AGTACT	1 cut(s)	1246
Zsp2I	ATGCAT	3 cut(s)	804, 1336, 2168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.