Rmu_sc0006443.1_g000002

Bifunctional purine biosynthesis protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006443.1
OG0002841
Physical Location & Seq
Reverse (-)
2767 .. 4361
1595 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 777 bp
atgtcatataataactatttagatgccgatgcggcttggaattgtgtgtcagagttcagaagtcctacttttgttgttgtaaaacgtacaaatccttgtggtgtagcatcacgtgatgatatacttgacgcatacaggcttgctgtcaaagcagatccagtgagtgcatttggtggcattgtagctttcaacatagaggttgatgaggctcttgctaaagaaatccgtgagtttagaagcccaacagatggtgaaactcggatgttttatgagattgtggttgcacccaagtattcaaagaaaggactcgaaatccttcgtggaaaatcaatgactctcaggatcctcgaggcaagaaaaaatgagaaaggaaaactttcgcttagacagtttaatgttgtgtctaagaaatctccagaagaaagtgagctcagtgatgcagagttcacatggttgtgtgtcaaacatgtcaaaagcaatgcaattgtaatagcaaagaataactgtatgttgggtatgggaagtggacagccgaaccgtttggagagtttaagaatagcattgaggaaagcaggagaggaggtcaagggtgcagctttggctagcgatgccttcttcccattcgcttggaaagatgccgtggaagaagcatgcgaaagtggagttagtgttattgcagaacctggtggcagtataagagacggagatgctatagattgctgcaacaagtatggtgtttcacttgttctcactaatgtgaggcacttcaggcattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
AICARFT_IMPCHas MGS

Protein Analysis

258

Amino Acids

28.46

Weight (kDa)

7.54

Isoelectric Point (pI)

44.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AICARFT_IMPCHas PF01808 1 - 190 1e-58 AICARFT/IMPCHase bienzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 347
AccB7I CCANNNNNTGG 1 cut(s) 248
AciI CCGC 1 cut(s) 32
AclWI GGATC 3 cut(s) 149, 337, 350
AcuI CTGAAG 1 cut(s) 751
AcvI CACGTG 1 cut(s) 113
AfaI GTAC 1 cut(s) 88
AfiI CCNNNNNNNGG 1 cut(s) 248
AflIII ACRYGT 1 cut(s) 466
AgsI TTSAA 2 cut(s) 190, 297
AjnI CCWGG 1 cut(s) 682
AleI CACNNNNGTG 1 cut(s) 755
AluBI AGCT 3 cut(s) 185, 430, 596
AluI AGCT 3 cut(s) 185, 430, 596
Alw21I GWGCWC 1 cut(s) 432
Alw26I GTCTC 1 cut(s) 693
AlwI GGATC 3 cut(s) 149, 337, 350
AlwNI CAGNNNCTG 1 cut(s) 683
Ama87I CYCGRG 1 cut(s) 347
ApeKI GCWGC 2 cut(s) 593, 720
Asp700I GAANNNNTTC 2 cut(s) 315, 376
AsuHPI GGTGA 1 cut(s) 263
AsuNHI GCTAGC 1 cut(s) 602
AvaI CYCGRG 1 cut(s) 347
BamHI GGATCC 1 cut(s) 342
BanII GRGCYC 1 cut(s) 432
BbrPI CACGTG 1 cut(s) 113
Bbv12I GWGCWC 1 cut(s) 432
BbvI GCAGC 2 cut(s) 605, 707
BccI CCATC 1 cut(s) 242
BceAI ACGGC 1 cut(s) 623
BciT130I CCWGG 1 cut(s) 684
BcoDI GTCTC 1 cut(s) 693
BfaI CTAG 1 cut(s) 603
BfmI CTRYAG 1 cut(s) 711
BglI GCCNNNNNGGC 1 cut(s) 32
BisI GCNGC 3 cut(s) 33, 594, 721
BlsI GCNGC 3 cut(s) 34, 595, 722
Bme1390I CCNGG 1 cut(s) 684
BmeT110I CYCGRG 1 cut(s) 347
BmiI GGNNCC 1 cut(s) 344
BmrFI CCNGG 1 cut(s) 684
BmsI GCATC 7 cut(s) 13, 19, 116, 427, 598, 625, 697
BmtI GCTAGC 1 cut(s) 606
BpmI CTGGAG 1 cut(s) 399
BsaAI YACGTR 1 cut(s) 113
BsaJI CCNNGG 1 cut(s) 639
BsaXI ACNNNNNCTCC 4 cut(s) 567, 597, 654, 684
Bsc4I CCNNNNNNNGG 1 cut(s) 248
Bse1I ACTGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 484
BseBI CCWGG 1 cut(s) 684
BseDI CCNNGG 1 cut(s) 639
BseGI GGATG 1 cut(s) 267
BseLI CCNNNNNNNGG 1 cut(s) 248
BseMI GCAATG 1 cut(s) 484
BseMII CTCAG 2 cut(s) 352, 445
BseNI ACTGG 1 cut(s) 158
BseRI GAGGAG 1 cut(s) 593
BseXI GCAGC 2 cut(s) 605, 707
BsgI GTGCAG 1 cut(s) 612
BsiHKAI GWGCWC 1 cut(s) 432
BsiHKCI CYCGRG 1 cut(s) 347
BslI CCNNNNNNNGG 1 cut(s) 248
BsmAI GTCTC 1 cut(s) 693
BsmBI CGTCTC 1 cut(s) 693
BsoBI CYCGRG 1 cut(s) 347
Bsp1286I GDGCHC 1 cut(s) 432
Bsp143I GATC 2 cut(s) 154, 342
BspACI CCGC 1 cut(s) 32
BspCNI CTCAG 2 cut(s) 351, 444
BspLI GGNNCC 1 cut(s) 344
BspOI GCTAGC 1 cut(s) 606
BspPI GGATC 3 cut(s) 149, 337, 350
BsrDI GCAATG 1 cut(s) 484
BsrI ACTGG 1 cut(s) 158
BssECI CCNNGG 1 cut(s) 639
BssMI GATC 2 cut(s) 154, 342
Bst2UI CCWGG 1 cut(s) 684
Bst4CI ACNGT 3 cut(s) 390, 506, 539
BstBAI YACGTR 1 cut(s) 113
BstC8I GCNNGC 3 cut(s) 141, 604, 652
BstDEI CTNAG 4 cut(s) 338, 383, 405, 431
BstDSI CCRYGG 1 cut(s) 639
BstF5I GGATG 1 cut(s) 267
BstKTI GATC 2 cut(s) 157, 345
BstMAI GTCTC 1 cut(s) 693
BstMBI GATC 2 cut(s) 154, 342
BstMWI GCNNNNNNNGC 5 cut(s) 32, 149, 599, 608, 769
BstNI CCWGG 1 cut(s) 684
BstNSI RCATGY 2 cut(s) 470, 654
BstSCI CCNGG 1 cut(s) 682
BstSFI CTRYAG 1 cut(s) 711
BstV1I GCAGC 2 cut(s) 605, 707
BstX2I RGATCY 2 cut(s) 154, 342
BstXI CCANNNNNNTGG 1 cut(s) 627
BstYI RGATCY 2 cut(s) 154, 342
BtgI CCRYGG 1 cut(s) 639
BtgZI GCGATG 1 cut(s) 621
BtsCI GGATG 1 cut(s) 267
BtsIMutI CAGTG 2 cut(s) 165, 439
Cac8I GCNNGC 3 cut(s) 141, 604, 652
CaiI CAGNNNCTG 1 cut(s) 683
CseI GACGC 1 cut(s) 137
CsiI ACCWGGT 1 cut(s) 682
Csp6I GTAC 1 cut(s) 87
CviAII CATG 3 cut(s) 450, 467, 651
CviJI RGCY 9 cut(s) 35, 139, 185, 209, 240, 430, 532, 596, 602
CviKI_1 RGCY 9 cut(s) 35, 139, 185, 209, 240, 430, 532, 596, 602
CviQI GTAC 1 cut(s) 87
DdeI CTNAG 4 cut(s) 338, 383, 405, 431
DpnI GATC 2 cut(s) 156, 344
DpnII GATC 2 cut(s) 154, 342
Ecl136II GAGCTC 1 cut(s) 430
Eco24I GRGCYC 1 cut(s) 432
Eco53kI GAGCTC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 751
Eco72I CACGTG 1 cut(s) 113
Eco88I CYCGRG 1 cut(s) 347
EcoICRI GAGCTC 1 cut(s) 430
EcoRII CCWGG 1 cut(s) 682
EcoT38I GRGCYC 1 cut(s) 432
Esp3I CGTCTC 1 cut(s) 693
FaeI CATG 3 cut(s) 453, 470, 654
FalI AAGNNNNNCTT 4 cut(s) 52, 84, 360, 392
FatI CATG 3 cut(s) 449, 466, 650
Fnu4HI GCNGC 3 cut(s) 33, 594, 721
FokI GGATG 1 cut(s) 274
FriOI GRGCYC 1 cut(s) 432
Fsp4HI GCNGC 3 cut(s) 33, 594, 721
FspBI CTAG 1 cut(s) 603
GluI GCNGC 3 cut(s) 33, 594, 721
GsuI CTGGAG 1 cut(s) 399
HgaI GACGC 1 cut(s) 137
Hin1II CATG 3 cut(s) 453, 470, 654
HinfI GANTC 2 cut(s) 306, 334
HphI GGTGA 1 cut(s) 263
Hpy166II GTNNAC 2 cut(s) 447, 527
Hpy188I TCNGA 3 cut(s) 52, 59, 261
Hpy188III TCNNGA 2 cut(s) 340, 416
Hpy8I GTNNAC 2 cut(s) 447, 527
HpyAV CCTTC 2 cut(s) 326, 622
HpyCH4III ACNGT 3 cut(s) 390, 506, 539
HpyCH4IV ACGT 2 cut(s) 85, 112
HpyCH4V TGCA 7 cut(s) 167, 284, 440, 482, 593, 677, 723
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 149, 599, 608, 769
HpyF3I CTNAG 4 cut(s) 338, 383, 405, 431
HpySE526I ACGT 2 cut(s) 85, 112
Hsp92II CATG 3 cut(s) 453, 470, 654
Kzo9I GATC 2 cut(s) 154, 342
LpnPI CCDG 8 cut(s) 121, 171, 325, 429, 558, 669, 696, 754
Lsp1109I GCAGC 2 cut(s) 605, 707
LweI GCATC 7 cut(s) 13, 19, 116, 427, 598, 625, 697
MabI ACCWGGT 1 cut(s) 682
MaeI CTAG 1 cut(s) 603
MaeII ACGT 2 cut(s) 85, 112
MalI GATC 2 cut(s) 156, 344
MboI GATC 2 cut(s) 154, 342
MboII GAAGA 3 cut(s) 431, 607, 656
MfeI CAATTG 1 cut(s) 483
MflI RGATCY 2 cut(s) 154, 342
MhlI GDGCHC 1 cut(s) 432
MluCI AATT 2 cut(s) 40, 483
MlyI GAGTC 2 cut(s) 300, 328
MnlI CCTC 8 cut(s) 190, 199, 343, 356, 558, 571, 574, 753
MroXI GAANNNNTTC 2 cut(s) 315, 376
MseI TTAA 3 cut(s) 393, 551, 775
MslI CAYNNNNRTG 2 cut(s) 454, 755
MspR9I CCNGG 1 cut(s) 684
MunI CAATTG 1 cut(s) 483
MvaI CCWGG 1 cut(s) 684
MwoI GCNNNNNNNGC 5 cut(s) 32, 149, 599, 608, 769
NdeII GATC 2 cut(s) 154, 342
NheI GCTAGC 1 cut(s) 602
NlaIII CATG 3 cut(s) 453, 470, 654
NlaIV GGNNCC 1 cut(s) 344
NspI RCATGY 2 cut(s) 470, 654
OliI CACNNNNGTG 1 cut(s) 755
PaeI GCATGC 1 cut(s) 654
PaeR7I CTCGAG 1 cut(s) 347
PciI ACATGT 1 cut(s) 466
PdmI GAANNNNTTC 2 cut(s) 315, 376
PflMI CCANNNNNTGG 1 cut(s) 248
PkrI GCNGC 3 cut(s) 34, 595, 722
PleI GAGTC 2 cut(s) 300, 328
PmaCI CACGTG 1 cut(s) 113
PmlI CACGTG 1 cut(s) 113
PpsI GAGTC 2 cut(s) 300, 328
Ppu21I YACGTR 1 cut(s) 113
PscI ACATGT 1 cut(s) 466
Psp124BI GAGCTC 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 682
PspCI CACGTG 1 cut(s) 113
PspGI CCWGG 1 cut(s) 682
PspN4I GGNNCC 1 cut(s) 344
PspXI VCTCGAGB 1 cut(s) 347
PstNI CAGNNNCTG 1 cut(s) 683
PsuI RGATCY 2 cut(s) 154, 342
RsaI GTAC 1 cut(s) 88
RsaNI GTAC 1 cut(s) 87
RseI CAYNNNNRTG 2 cut(s) 454, 755
SacI GAGCTC 1 cut(s) 432
SaqAI TTAA 3 cut(s) 393, 551, 775
SatI GCNGC 3 cut(s) 33, 594, 721
Sau3AI GATC 2 cut(s) 154, 342
SchI GAGTC 2 cut(s) 300, 328
ScrFI CCNGG 1 cut(s) 684
SduI GDGCHC 1 cut(s) 432
SetI ASST 8 cut(s) 88, 115, 187, 201, 432, 585, 598, 685
SexAI ACCWGGT 1 cut(s) 682
SfaNI GCATC 7 cut(s) 13, 19, 116, 427, 598, 625, 697
SfcI CTRYAG 1 cut(s) 711
Sfr274I CTCGAG 1 cut(s) 347
SlaI CTCGAG 1 cut(s) 347
SmiMI CAYNNNNRTG 2 cut(s) 454, 755
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
SphI GCATGC 1 cut(s) 654
Sse9I AATT 2 cut(s) 40, 483
SsiI CCGC 1 cut(s) 32
SspMI CTAG 1 cut(s) 603
SstI GAGCTC 1 cut(s) 432
StyD4I CCNGG 1 cut(s) 682
TaaI ACNGT 3 cut(s) 390, 506, 539
TaiI ACGT 2 cut(s) 88, 115
TaqI TCGA 2 cut(s) 309, 348
TasI AATT 2 cut(s) 40, 483
TauI GCSGC 1 cut(s) 35
Tru1I TTAA 3 cut(s) 393, 551, 775
Tru9I TTAA 3 cut(s) 393, 551, 775
TscAI CASTG 2 cut(s) 165, 439
TseI GCWGC 2 cut(s) 593, 720
TspGWI ACGGA 2 cut(s) 215, 717
TspRI CASTG 2 cut(s) 165, 439
Van91I CCANNNNNTGG 1 cut(s) 248
XceI RCATGY 2 cut(s) 470, 654
XhoI CTCGAG 1 cut(s) 347
XmnI GAANNNNTTC 2 cut(s) 315, 376
XspI CTAG 1 cut(s) 603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.