Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006711.1

Orthogroup ID

OG0004305

Physical Location & Seq

Genomic Coordinates Forward (+)

28993 .. 33296

Gene Structure 4304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006711.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

atgaccttagagcaagtgcaccggtgctcttttgcccgggcaccacctcagcaatccttgattttgactgggcaagctccttttttatcctccacatggcctgttttgcctgggcagcatttggctttgtttgaccaagggaaaaaaaatgtcaagcccatgcctttttctttgcccaggcttggcctgctgccacctcggcccgcgactgatcgcaagaaaacaaccggtgtaaacccatgtccagtggcagtgaatagtaaccaggtggctgatgcattggccaattttggcgcttctgggaacttcggttcgattgttatagttgacagtgtcggaaccgacgagaacagaaatcgagaaccttcggttcggttttccggttttaatgattccttgatgaagttgaaaaaatccccaaaaacaggcaattttctagttccatctctaacctctccacccgttacactgcgtagtaggcctcgtcttctgcatctcggacttcaacaagcacggtgtctccaccgacgggaccatgcgtcggacctgacccttgaaccggttgttgttgaggtagaggttctggacggcgagaataggaatctcggtccggttccgaagcggtggagaggggtctgtgaaaccggagttaaatttacagctcggaattgcaataagaaggtgattggagctcggttcttcatcaaaggtcatgaagccgccgccaatgccggcggtccgataactgcgatcaacggttcagttgaattccggtctcctagagacgccgacggacatggaacacacacggcgtccaccgccgccggtcggtacgccttcgaggccagcatgtccggctacgcttccggcatcgcaaagggagttgctccgaaatctcgcttggctatctacaaggtctgctggaaggactccggttgcttcgactccgatatcttggccgccttcgacgccgccgtcaacgacggcgtagacgtcatttcaatctcaattggaggcggcgatggaatttcttctccctattatctcgatccgattgcaatcggatcattcggcgccgtttcgcatggagtgtttgtttcggcctccgccgggaacgacggacctaacggaatgtcggtgacgaacctggcgccgtggctgacgactgtcggagcgggaacaatcgatcggaacttcccggcggtggtggtcctaggcgacggccggagactctccggcgtttctctatacgccggagctccgctgaaggggaagatgtacccgctggtctatcccggaaagtcaggtatgctctctacttcactgtgcatggagaactccctggacccgcgtcaggtgaggggcaaaatcgtcatttgcgacaggggaaacaatcccagagtggcgaaaggtatggtggtgaagaaagcaggaggtgtggggatgatcctggctaacggaatctccaacggcgaaggactcgtcggcgatgctcaccttctccccaccgcagctgtcggcgccgacgaaggtgacgccgtcaaagcttatgtgtcgtccaccaagactccttcagctactatcgacttccaggggactgtgatcggaatcaagccggctccggtggttgcttcgttttcgggtagaggtccaaacgggttgaacccggagattctgaagccggatctgatcgctcccggagtcaacatcctcgctgcttggaccgacgcggtgggcccaaccgggttggaagcggattaccggaaaacagagtttaatatcctctcgggaacatcaatggctgcccctcacgtgagcggagccgccgctctgctcaagtcggctcaccccaattggagtccggcggtgataagatcggcgatgatgacgactgctggcatcaccaataatcagaacaagaccatgactgatgaagctactggaaatccctccactccttatgatttaggggcgggtcatttgaatttggaccgggccatggacccgggtctggtatatgatatcaccggtgaggattacgtccggtttctctgctcggtcgggtacgggccgagagtaatccaggtgatcactcggtcgccgccgaaatgtccggggaaaaagacttcgccgggaaatctgaactacccgtcaatcgccgcgttgtttccgacttccgcgtcggggccgtccagcaagacgtttattcggacggtgacgaatgtgggccagcccaatgcggtatacaggcccatgatagaggcgcctaaaggagtgaaggtgacggtgaagccgtcgaagctggtgttcacggaggcggtgaagaagcggagctacttggtgacggtggcggtggataggagcaacatcgtgttgggtgagtcggggggtgtgttcgggtcgctatattggagcgatgggaagcagcatgtggttcggagccccattgtggtgacccaaatggatcccttgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

824

Amino Acids

86.57

Weight (kDa)

9.46

Isoelectric Point (pI)

33.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34980
fragaria_vesca	FvH4_2g01410 FvH4_3g19440
malus_domestica	MD05G1120100.v1.1 MD10G1123500.v1.1
prunus_persica	Prupe.8G164000_v2.0.a1
pyrus_communis	pycom05g11390 pycom10g10580
rosa_chinensis	RchiOBHm_Chr6g0244021 RchiOBHm_Chr6g0252351 RchiOBHm_Chr6g0252361
rosa_laevigata	RLG00000015390 RLG00000029339
rosa_multiflora	Rmu_co8423929.1_g000001 Rmu_sc0001251.1_g000002 Rmu_sc0006415.1_g000012 Rmu_sc0006711.1_g000006 Rmu_sc0007419.1_g000002
rosa_roxburghii	Rroxscaffold_6G00388820 Rroxscaffold_6G00388840
rosa_rugosa	Rorug05G0223500 Rorug05G0506700 Rorug05G0515900
rosa_samantha	Rh1CG388200 Rh2AG211900 Rh3DG088300 Rh5BG286100 Rh5DG294800 Rh6AG021200 Rh6CG013400 Rh6DG014700
rosa_wichuraiana	Rw6G001740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	974, 2179
AatII	GACGTC	1 cut(s)	996
AccB1I	GGYRCC	5 cut(s)	40, 1073, 1150, 1520, 2263
AccBSI	CCGCTC	3 cut(s)	1175, 1818, 1829
AccI	GTMKAC	2 cut(s)	990, 2244
AccII	CGCG	5 cut(s)	206, 1351, 1730, 2162, 2180
AclWI	GGATC	6 cut(s)	1043, 1072, 1441, 1692, 2459, 2472
AcoI	YGGCCR	3 cut(s)	282, 957, 1222
AcsI	RAATTY	4 cut(s)	653, 767, 1026, 1984
AcuI	CTGAAG	3 cut(s)	1286, 1557, 1697
AcvI	CACGTG	1 cut(s)	1813
AcyI	GRCGYC	9 cut(s)	786, 812, 969, 993, 1074, 1151, 1521, 1536, 2264
AfaI	GTAC	3 cut(s)	833, 1280, 2066
AgeI	ACCGGT	4 cut(s)	21, 227, 559, 2027
AgsI	TTSAA	7 cut(s)	409, 506, 557, 767, 1002, 1663, 1984
AhdI	GACNNNNNGTC	1 cut(s)	538
AjnI	CCWGG	8 cut(s)	109, 176, 264, 1146, 1341, 1449, 1590, 2082
AjuI	GAANNNNNNNTTGG	2 cut(s)	884, 916
AloI	GAACNNNNNNTCC	2 cut(s)	295, 327
Alw21I	GWGCWC	4 cut(s)	21, 29, 694, 1261
Alw26I	GTCTC	4 cut(s)	524, 777, 780, 1222
Alw44I	GTGCAC	1 cut(s)	17
AlwI	GGATC	6 cut(s)	1043, 1072, 1441, 1692, 2459, 2472
Ama87I	CYCGRG	3 cut(s)	36, 1786, 2005
ApaI	GGGCCC	1 cut(s)	1739
ApaLI	GTGCAC	1 cut(s)	17
ApeKI	GCWGC	6 cut(s)	115, 190, 1511, 1715, 1802, 2425
ApoI	RAATTY	4 cut(s)	653, 767, 1026, 1984
ArsI	GACNNNNNNTTYG	2 cut(s)	1467, 1499
AsiGI	ACCGGT	4 cut(s)	21, 227, 559, 2027
Asp700I	GAANNNNTTC	1 cut(s)	1030
AspA2I	CCTAGG	1 cut(s)	1213
AspLEI	GCGC	5 cut(s)	296, 1076, 1153, 1523, 2266
AvaI	CYCGRG	3 cut(s)	36, 1786, 2005
AvrII	CCTAGG	1 cut(s)	1213
BaeGI	GKGCMC	3 cut(s)	21, 43, 1739
BalI	TGGCCA	1 cut(s)	284
BamHI	GGATCC	1 cut(s)	2464
BanI	GGYRCC	5 cut(s)	40, 1073, 1150, 1520, 2263
BanII	GRGCYC	4 cut(s)	694, 1261, 1739, 2444
BarI	GAAGNNNNNNTAC	2 cut(s)	2318, 2350
BbrPI	CACGTG	1 cut(s)	1813
BbsI	GAAGAC	1 cut(s)	479
Bbv12I	GWGCWC	4 cut(s)	21, 29, 694, 1261
BbvCI	CCTCAGC	1 cut(s)	48
BbvI	GCAGC	6 cut(s)	127, 177, 1523, 1702, 1789, 2437
BccI	CCATC	3 cut(s)	451, 1016, 2411
BcgI	CGANNNNNNTGC	4 cut(s)	1037, 1071, 2417, 2451
BciT130I	CCWGG	8 cut(s)	111, 178, 266, 1148, 1343, 1451, 1592, 2084
BclI	TGATCA	1 cut(s)	2088
BcoDI	GTCTC	4 cut(s)	524, 777, 780, 1222
BfaI	CTAG	3 cut(s)	437, 780, 1214
BfoI	RGCGCY	5 cut(s)	297, 1077, 1154, 1524, 2267
BglI	GCCNNNNNGGC	2 cut(s)	199, 842
BlnI	CCTAGG	1 cut(s)	1213
BmeRI	GACNNNNNGTC	1 cut(s)	538
BmeT110I	CYCGRG	3 cut(s)	36, 1786, 2005
BmrI	ACTGGG	1 cut(s)	78
BmsI	GCATC	5 cut(s)	265, 502, 879, 1480, 1908
BmuI	ACTGGG	1 cut(s)	78
BoxI	GACNNNNGTC	3 cut(s)	1166, 1350, 2007
BpiI	GAAGAC	1 cut(s)	479
Bpu10I	CCTNAGC	1 cut(s)	48
BpuEI	CTTGAG	1 cut(s)	1820
Bsa29I	ATCGAT	1 cut(s)	1185
BsaAI	YACGTR	1 cut(s)	1813
BsaBI	GATNNNNATC	2 cut(s)	1058, 1607
BsaHI	GRCGYC	9 cut(s)	786, 812, 969, 993, 1074, 1151, 1521, 1536, 2264
BsaI	GGTCTC	1 cut(s)	780
Bse118I	RCCGGY	7 cut(s)	21, 227, 559, 731, 824, 1615, 2027
Bse1I	ACTGG	3 cut(s)	73, 245, 1945
Bse8I	GATNNNNATC	2 cut(s)	1058, 1607
BseBI	CCWGG	8 cut(s)	111, 178, 266, 1148, 1343, 1451, 1592, 2084
BseCI	ATCGAT	1 cut(s)	1185
BseGI	GGATG	2 cut(s)	1449, 1707
BseJI	GATNNNNATC	2 cut(s)	1058, 1607
BseMII	CTCAG	1 cut(s)	62
BseNI	ACTGG	3 cut(s)	73, 245, 1945
BseSI	GKGCMC	3 cut(s)	21, 43, 1739
BseX3I	CGGCCG	1 cut(s)	1222
BseXI	GCAGC	6 cut(s)	127, 177, 1523, 1702, 1789, 2437
Bsh1236I	CGCG	5 cut(s)	206, 1351, 1730, 2162, 2180
Bsh1285I	CGRYCG	5 cut(s)	829, 1189, 1225, 2061, 2099
BshNI	GGYRCC	5 cut(s)	40, 1073, 1150, 1520, 2263
BshTI	ACCGGT	4 cut(s)	21, 227, 559, 2027
BshVI	ATCGAT	1 cut(s)	1185
BsiEI	CGRYCG	5 cut(s)	829, 1189, 1225, 2061, 2099
BsiHKAI	GWGCWC	4 cut(s)	21, 29, 694, 1261
BsiHKCI	CYCGRG	3 cut(s)	36, 1786, 2005
BslFI	GGGAC	2 cut(s)	545, 1609
BsmAI	GTCTC	4 cut(s)	524, 777, 780, 1222
BsmBI	CGTCTC	1 cut(s)	777
BsmFI	GGGAC	2 cut(s)	545, 1609
Bso31I	GGTCTC	1 cut(s)	780
BsoBI	CYCGRG	3 cut(s)	36, 1786, 2005
Bsp120I	GGGCCC	1 cut(s)	1735
Bsp1286I	GDGCHC	7 cut(s)	21, 29, 43, 694, 1261, 1739, 2444
Bsp19I	CCATGG	1 cut(s)	1998
BspCNI	CTCAG	1 cut(s)	61
BspDI	ATCGAT	1 cut(s)	1185
BspFNI	CGCG	5 cut(s)	206, 1351, 1730, 2162, 2180
BspHI	TCATGA	1 cut(s)	712
BspPI	GGATC	6 cut(s)	1043, 1072, 1441, 1692, 2459, 2472
BspT107I	GGYRCC	5 cut(s)	40, 1073, 1150, 1520, 2263
BspTNI	GGTCTC	1 cut(s)	780
BsrBI	CCGCTC	3 cut(s)	1175, 1818, 1829
BsrFI	RCCGGY	7 cut(s)	21, 227, 559, 731, 824, 1615, 2027
BsrI	ACTGG	3 cut(s)	73, 245, 1945
BssAI	RCCGGY	7 cut(s)	21, 227, 559, 731, 824, 1615, 2027
BssNAI	GTATAC	1 cut(s)	2245
BssNI	GRCGYC	9 cut(s)	786, 812, 969, 993, 1074, 1151, 1521, 1536, 2264
BssT1I	CCWWGG	3 cut(s)	136, 1213, 1998
Bst1107I	GTATAC	1 cut(s)	2245
Bst2UI	CCWGG	8 cut(s)	111, 178, 266, 1148, 1343, 1451, 1592, 2084
Bst4CI	ACNGT	9 cut(s)	332, 516, 758, 1168, 1326, 1600, 2215, 2287, 2347
BstACI	GRCGYC	9 cut(s)	786, 812, 969, 993, 1074, 1151, 1521, 1536, 2264
BstBAI	YACGTR	1 cut(s)	1813
BstC8I	GCNNGC	8 cut(s)	75, 188, 204, 733, 847, 1617, 1897, 2231
BstDEI	CTNAG	2 cut(s)	7, 48
BstDSI	CCRYGG	2 cut(s)	1154, 1998
BstEII	GGTNACC	1 cut(s)	2452
BstF5I	GGATG	2 cut(s)	1449, 1707
BstFNI	CGCG	5 cut(s)	206, 1351, 1730, 2162, 2180
BstH2I	RGCGCY	5 cut(s)	297, 1077, 1154, 1524, 2267
BstHHI	GCGC	5 cut(s)	296, 1076, 1153, 1523, 2266
BstMAI	GTCTC	4 cut(s)	524, 777, 780, 1222
BstMCI	CGRYCG	5 cut(s)	829, 1189, 1225, 2061, 2099
BstNI	CCWGG	8 cut(s)	111, 178, 266, 1148, 1343, 1451, 1592, 2084
BstNSI	RCATGY	2 cut(s)	853, 2432
BstPAI	GACNNNNGTC	3 cut(s)	1166, 1350, 2007
BstPI	GGTNACC	1 cut(s)	2452
BstSLI	GKGCMC	3 cut(s)	21, 43, 1739
BstUI	CGCG	5 cut(s)	206, 1351, 1730, 2162, 2180
BstV1I	GCAGC	6 cut(s)	127, 177, 1523, 1702, 1789, 2437
BstV2I	GAAGAC	1 cut(s)	479
BstX2I	RGATCY	2 cut(s)	1684, 2464
BstYI	RGATCY	2 cut(s)	1684, 2464
BstZ17I	GTATAC	1 cut(s)	2245
BstZI	CGGCCG	1 cut(s)	1222
Bsu15I	ATCGAT	1 cut(s)	1185
BsuTUI	ATCGAT	1 cut(s)	1185
BtgI	CCRYGG	2 cut(s)	1154, 1998
BtgZI	GCGATG	5 cut(s)	856, 1035, 1503, 1895, 2430
BtsCI	GGATG	2 cut(s)	1449, 1707
BtsI	GCAGTG	2 cut(s)	258, 467
BtsIMutI	CAGTG	5 cut(s)	252, 258, 337, 467, 1322
Cac8I	GCNNGC	8 cut(s)	75, 188, 204, 733, 847, 1617, 1897, 2231
CciI	TCATGA	1 cut(s)	712
CfoI	GCGC	5 cut(s)	296, 1076, 1153, 1523, 2266
Cfr10I	RCCGGY	7 cut(s)	21, 227, 559, 731, 824, 1615, 2027
Cfr9I	CCCGGG	2 cut(s)	36, 2005
ClaI	ATCGAT	1 cut(s)	1185
CpoI	CGGWCCG	2 cut(s)	608, 737
CseI	GACGC	8 cut(s)	528, 794, 801, 977, 1340, 1544, 1736, 2169
CsiI	ACCWGGT	1 cut(s)	264
Csp6I	GTAC	3 cut(s)	832, 1279, 2065
CspAI	ACCGGT	4 cut(s)	21, 227, 559, 2027
CspI	CGGWCCG	2 cut(s)	608, 737
CviQI	GTAC	3 cut(s)	832, 1279, 2065
DdeI	CTNAG	2 cut(s)	7, 48
DinI	GGCGCC	4 cut(s)	1075, 1152, 1522, 2265
DrdI	GACNNNNNNGTC	2 cut(s)	974, 2179
DriI	GACNNNNNGTC	1 cut(s)	538
DseDI	GACNNNNNNGTC	2 cut(s)	974, 2179
EaeI	YGGCCR	3 cut(s)	282, 957, 1222
EagI	CGGCCG	1 cut(s)	1222
Eam1105I	GACNNNNNGTC	1 cut(s)	538
EciI	GGCGGA	1 cut(s)	1096
Ecl136II	GAGCTC	2 cut(s)	692, 1259
EclXI	CGGCCG	1 cut(s)	1222
Eco130I	CCWWGG	3 cut(s)	136, 1213, 1998
Eco147I	AGGCCT	1 cut(s)	481
Eco24I	GRGCYC	4 cut(s)	694, 1261, 1739, 2444
Eco31I	GGTCTC	1 cut(s)	780
Eco32I	GATATC	2 cut(s)	952, 2023
Eco52I	CGGCCG	1 cut(s)	1222
Eco53kI	GAGCTC	2 cut(s)	692, 1259
Eco57I	CTGAAG	3 cut(s)	1286, 1557, 1697
Eco72I	CACGTG	1 cut(s)	1813
Eco88I	CYCGRG	3 cut(s)	36, 1786, 2005
Eco91I	GGTNACC	1 cut(s)	2452
EcoICRI	GAGCTC	2 cut(s)	692, 1259
EcoO65I	GGTNACC	1 cut(s)	2452
EcoRI	GAATTC	1 cut(s)	767
EcoRII	CCWGG	8 cut(s)	109, 176, 264, 1146, 1341, 1449, 1590, 2082
EcoRV	GATATC	2 cut(s)	952, 2023
EcoT14I	CCWWGG	3 cut(s)	136, 1213, 1998
EcoT22I	ATGCAT	1 cut(s)	280
EcoT38I	GRGCYC	4 cut(s)	694, 1261, 1739, 2444
EgeI	GGCGCC	4 cut(s)	1075, 1152, 1522, 2265
EheI	GGCGCC	4 cut(s)	1075, 1152, 1522, 2265
ErhI	CCWWGG	3 cut(s)	136, 1213, 1998
Esp3I	CGTCTC	1 cut(s)	777
FaqI	GGGAC	2 cut(s)	545, 1609
FauI	CCCGC	5 cut(s)	211, 1168, 1290, 1356, 1966
FbaI	TGATCA	1 cut(s)	2088
FblI	GTMKAC	2 cut(s)	990, 2244
FokI	GGATG	2 cut(s)	1456, 1694
FriOI	GRGCYC	4 cut(s)	694, 1261, 1739, 2444
FspBI	CTAG	3 cut(s)	437, 780, 1214
GlaI	GCGC	5 cut(s)	295, 1075, 1152, 1522, 2265
HaeII	RGCGCY	5 cut(s)	297, 1077, 1154, 1524, 2267
HgaI	GACGC	8 cut(s)	528, 794, 801, 977, 1340, 1544, 1736, 2169
HhaI	GCGC	5 cut(s)	296, 1076, 1153, 1523, 2266
Hin1I	GRCGYC	9 cut(s)	786, 812, 969, 993, 1074, 1151, 1521, 1536, 2264
Hin6I	GCGC	5 cut(s)	294, 1074, 1151, 1521, 2264
HinP1I	GCGC	5 cut(s)	294, 1074, 1151, 1521, 2264
HincII	GTYRAC	3 cut(s)	328, 979, 1705
HindII	GTYRAC	3 cut(s)	328, 979, 1705
HindIII	AAGCTT	1 cut(s)	1545
Hpy188III	TCNNGA	5 cut(s)	359, 584, 713, 1046, 1788
HpyCH4III	ACNGT	9 cut(s)	332, 516, 758, 1168, 1326, 1600, 2215, 2287, 2347
HpyCH4IV	ACGT	4 cut(s)	993, 1812, 2040, 2201
HpyCH4V	TGCA	6 cut(s)	19, 278, 493, 672, 1058, 1329
HpyF3I	CTNAG	2 cut(s)	7, 48
HpySE526I	ACGT	4 cut(s)	993, 1812, 2040, 2201
Hsp92I	GRCGYC	9 cut(s)	786, 812, 969, 993, 1074, 1151, 1521, 1536, 2264
HspAI	GCGC	5 cut(s)	294, 1074, 1151, 1521, 2264
KasI	GGCGCC	4 cut(s)	1073, 1150, 1520, 2263
KroI	GCCGGC	2 cut(s)	731, 1615
KroNI	GCCGGC	2 cut(s)	733, 1617
Ksp22I	TGATCA	1 cut(s)	2088
Lsp1109I	GCAGC	6 cut(s)	127, 177, 1523, 1702, 1789, 2437
LweI	GCATC	5 cut(s)	265, 502, 879, 1480, 1908
MabI	ACCWGGT	1 cut(s)	264
MaeI	CTAG	3 cut(s)	437, 780, 1214
MaeII	ACGT	4 cut(s)	993, 1812, 2040, 2201
MaeIII	GTNAC	8 cut(s)	260, 463, 1138, 1532, 2215, 2281, 2341, 2452
MbiI	CCGCTC	3 cut(s)	1175, 1818, 1829
MboII	GAAGA	6 cut(s)	479, 691, 1023, 1285, 1435, 2335
MfeI	CAATTG	2 cut(s)	1008, 1852
MflI	RGATCY	2 cut(s)	1684, 2464
MhlI	GDGCHC	7 cut(s)	21, 29, 43, 694, 1261, 1739, 2444
MlsI	TGGCCA	1 cut(s)	284
MluCI	AATT	9 cut(s)	286, 430, 653, 667, 767, 1008, 1026, 1852, 1984
MluNI	TGGCCA	1 cut(s)	284
Mly113I	GGCGCC	4 cut(s)	1074, 1151, 1521, 2264
MlyI	GAGTC	8 cut(s)	923, 938, 1224, 1473, 1561, 1710, 1867, 2390
MmeI	TCCRAC	6 cut(s)	316, 522, 1150, 1491, 1728, 2195
Mox20I	TGGCCA	1 cut(s)	284
Mph1103I	ATGCAT	1 cut(s)	280
MroNI	GCCGGC	2 cut(s)	731, 1615
MroXI	GAANNNNTTC	1 cut(s)	1030
MscI	TGGCCA	1 cut(s)	284
MseI	TTAA	3 cut(s)	387, 651, 1776
MslI	CAYNNNNRTG	1 cut(s)	2450
Msp20I	TGGCCA	1 cut(s)	284
MspA1I	CMGCKG	3 cut(s)	1264, 1285, 1514
MunI	CAATTG	2 cut(s)	1008, 1852
MvaI	CCWGG	8 cut(s)	111, 178, 266, 1148, 1343, 1451, 1592, 2084
MvnI	CGCG	5 cut(s)	206, 1351, 1730, 2162, 2180
NaeI	GCCGGC	2 cut(s)	733, 1617
NarI	GGCGCC	4 cut(s)	1074, 1151, 1521, 2264
NcoI	CCATGG	1 cut(s)	1998
NgoMIV	GCCGGC	2 cut(s)	731, 1615
NmeAIII	GCCGAG	2 cut(s)	178, 2097
NmuCI	GTSAC	6 cut(s)	1138, 1532, 2215, 2281, 2341, 2452
NsiI	ATGCAT	1 cut(s)	280
NspI	RCATGY	2 cut(s)	853, 2432
PagI	TCATGA	1 cut(s)	712
PceI	AGGCCT	1 cut(s)	481
PcsI	WCGNNNNNNNCGW	6 cut(s)	342, 972, 990, 1377, 1524, 2291
PdiI	GCCGGC	2 cut(s)	733, 1617
PdmI	GAANNNNTTC	1 cut(s)	1030
PfeI	GAWTC	5 cut(s)	392, 601, 1461, 1608, 1672
PflFI	GACNNNGTC	2 cut(s)	332, 1538
PfoI	TCCNGGA	2 cut(s)	1294, 1696
PinAI	ACCGGT	4 cut(s)	21, 227, 559, 2027
Ple19I	CGATCG	1 cut(s)	1189
PleI	GAGTC	8 cut(s)	923, 938, 1224, 1473, 1561, 1709, 1866, 2389
PluTI	GGCGCC	4 cut(s)	1077, 1154, 1524, 2267
PmaCI	CACGTG	1 cut(s)	1813
PmlI	CACGTG	1 cut(s)	1813
PpsI	GAGTC	8 cut(s)	923, 938, 1224, 1473, 1561, 1709, 1866, 2389
Ppu21I	YACGTR	1 cut(s)	1813
PshAI	GACNNNNGTC	3 cut(s)	1166, 1350, 2007
Psp124BI	GAGCTC	2 cut(s)	694, 1261
Psp6I	CCWGG	8 cut(s)	109, 176, 264, 1146, 1341, 1449, 1590, 2082
PspCI	CACGTG	1 cut(s)	1813
PspEI	GGTNACC	1 cut(s)	2452
PspGI	CCWGG	8 cut(s)	109, 176, 264, 1146, 1341, 1449, 1590, 2082
PspOMI	GGGCCC	1 cut(s)	1735
PsuI	RGATCY	2 cut(s)	1684, 2464
PsyI	GACNNNGTC	2 cut(s)	332, 1538
PvuI	CGATCG	1 cut(s)	1189
PvuII	CAGCTG	1 cut(s)	1514
RsaI	GTAC	3 cut(s)	833, 1280, 2066
RsaNI	GTAC	3 cut(s)	832, 1279, 2065
RseI	CAYNNNNRTG	1 cut(s)	2450
Rsr2I	CGGWCCG	2 cut(s)	608, 737
RsrII	CGGWCCG	2 cut(s)	608, 737
SacI	GAGCTC	2 cut(s)	694, 1261
SaqAI	TTAA	3 cut(s)	387, 651, 1776
SchI	GAGTC	8 cut(s)	923, 938, 1224, 1473, 1561, 1710, 1867, 2390
SduI	GDGCHC	7 cut(s)	21, 29, 43, 694, 1261, 1739, 2444
SexAI	ACCWGGT	1 cut(s)	264
SfaNI	GCATC	5 cut(s)	265, 502, 879, 1480, 1908
SfoI	GGCGCC	4 cut(s)	1075, 1152, 1522, 2265
SgrAI	CRCCGGYG	2 cut(s)	21, 2027
SmaI	CCCGGG	2 cut(s)	38, 2007
SmiMI	CAYNNNNRTG	1 cut(s)	2450
SmlI	CTYRAG	1 cut(s)	1835
SmoI	CTYRAG	1 cut(s)	1835
SrfI	GCCCGGGC	1 cut(s)	38
Sse9I	AATT	9 cut(s)	286, 430, 653, 667, 767, 1008, 1026, 1852, 1984
SseBI	AGGCCT	1 cut(s)	481
SspDI	GGCGCC	4 cut(s)	1073, 1150, 1520, 2263
SspMI	CTAG	3 cut(s)	437, 780, 1214
SstI	GAGCTC	2 cut(s)	694, 1261
StuI	AGGCCT	1 cut(s)	481
StyI	CCWWGG	3 cut(s)	136, 1213, 1998
TaaI	ACNGT	9 cut(s)	332, 516, 758, 1168, 1326, 1600, 2215, 2287, 2347
TaiI	ACGT	4 cut(s)	996, 1815, 2043, 2204
TaqI	TCGA	9 cut(s)	314, 358, 840, 942, 966, 1047, 1185, 1584, 2297
TaqII	GACCGA	4 cut(s)	596, 1739, 2047, 2085
TasI	AATT	9 cut(s)	286, 430, 653, 667, 767, 1008, 1026, 1852, 1984
TfiI	GAWTC	5 cut(s)	392, 601, 1461, 1608, 1672
Tru1I	TTAA	3 cut(s)	387, 651, 1776
Tru9I	TTAA	3 cut(s)	387, 651, 1776
TscAI	CASTG	5 cut(s)	252, 258, 337, 474, 1329
TseFI	GTSAC	6 cut(s)	1138, 1532, 2215, 2281, 2341, 2452
TseI	GCWGC	6 cut(s)	115, 190, 1511, 1715, 1802, 2425
Tsp45I	GTSAC	6 cut(s)	1138, 1532, 2215, 2281, 2341, 2452
TspDTI	ATGAA	4 cut(s)	416, 691, 729, 1947
TspGWI	ACGGA	5 cut(s)	807, 1134, 1143, 1473, 2327
TspMI	CCCGGG	2 cut(s)	36, 2005
TspRI	CASTG	5 cut(s)	252, 258, 337, 474, 1329
Tth111I	GACNNNGTC	2 cut(s)	332, 1538
VneI	GTGCAC	1 cut(s)	17
XapI	RAATTY	4 cut(s)	653, 767, 1026, 1984
XceI	RCATGY	2 cut(s)	853, 2432
XmaI	CCCGGG	2 cut(s)	36, 2005
XmaJI	CCTAGG	1 cut(s)	1213
XmiI	GTMKAC	2 cut(s)	990, 2244
XmnI	GAANNNNTTC	1 cut(s)	1030
XspI	CTAG	3 cut(s)	437, 780, 1214
ZraI	GACGTC	1 cut(s)	994
Zsp2I	ATGCAT	1 cut(s)	280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.