Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0004305

Physical Location & Seq

Genomic Coordinates Reverse (-)

1511568 .. 1513883

Gene Structure 2316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG013400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGCTACCTTTCTCTCCATTTCCCTCATCTTCATCTTCTTCTTCATATCTCAGATCGAATCAGAGCCCCTCGATCAGACGGTGAAGACCTTCATCTTCAGAATCGACAGATTCTCCAAGCCGTCGATTTTCCAGTCGCATTACCACTGGTACACCTCGGAGTTCGCCGACCCACCTCAAATTCTCAACGTATACGACACCGTTTTCCATGGCTTCTCTGCAACTCTCAGCCCAGACCAAGTTGCCTCCCTCAGCCAACACCCCGCCGTCCTCCACGTGTTCGAAGACCGCCGCCGCCAGCTCCACACCACCCGCTCGCCGCAGTTCCTGGGCCTGAGAAACCAGAAGGGGCTCTGGTCGGAATCCGATTACGGCTCTGACGTCATCGTCGGGGTTTTCGATACTGGAGTTTGGCCGGAGCGTCGGAGCTTTTCCGATAGGAATCTCGGTCCTGTTCCGAAGCGGTGGAGAGGGGTCTGTGAAACCGGAGTTAAATTTACAGCTCGGAATTGCAATAAGAAGGTGATCGGAGCTCGGTTCTTCATCAAAGGCCATGAGGCCGCCGCCAATGCCGGCGGTCCGATAACCGCAATCAACGGCTCAGTTGAATTCCGGTCTCCCAGAGACGCCGACGGCCATGGGACACACACGGCCTCCACCGCCGCCGGCCGGTACGCCTTCGAGGCCAGCATGTCCGGCTACGCTTCCGGCATCGCAAAGGGAGTTGCTCCGAAATCTCGCTTGGCTGTCTACAAGGTCTGCTGGAAGGACTCCGGTTGCTTCGACTCCGATATCTTGGCCGCCTTCGAGGCCGCCGTCAACGACGGCGTTGACGTCATTTCAATCTCAATTGGAGGCGGCGATGGAGTTTCTTCTCCCTATTATCTCGATCCGATTGCGATCGGATCATTCGGCGCCGCTGCGCATGGAGTGTTTGTTTCGGCCTCCGCCGGGAACGACGGACCTAACGGAATGTCGGTGACGAACCTGGCGCCGTGGCTGACGACTGTTGGAGCAGGAACAATTGATCGGAACTTCCCGGCGGTGGTGGTCCTAGGCGACGGCCGGAGACTCTCCGGAGTTTCTTTATACGCCGGAGCTCCGCTGAAGGGGAAGATGTACCCGCTGGTCTATCCCGGAAAGTCAGGTATGCTCTCTACTTCACTGTGCATGGAGAACTCCCTGGACCCGCGTCAGGTGAGGGGCAAAATCGTAATTTGCGACAGGGGAAACAATCCCAGAGTGGCGAAAGGTATGGTGGTGAAGAAAGCAGGAGGTGTGGGGATGATCCTGGCTAACGGAATCTCCAACGGCGAAGGACTTGTCGGCGATGCTCATCTTCTCCCCACCGCAGCTGTCGGCGCCGACGAAGGTGACGCCGTCAAGGCTTATGTCTCCTCTACCAAGACTCCTTCAGCTACTATTGATTTCCAGGGGACTGTAATCGGAATCAAGCCGGCTCCGGTGGTGGCTTCGTTTTCGGGTAGAGGGCCGAACGGGTTGAACCCGGAGATTCTGAAGCCGGATCTGATCGCTCCGGGAGTCAACATCCTCGCTGCGTGGACCGACGCTGTGGGCCCAACCGGGTTGGAAGCGGATAACCGGAAAACAGAGTTTAATATCCTCTCGGGAACATCAATGGCTGCCCCTCACGTGAGCGGAGCCGCCGCTCTGCTGAAGTCGGCTCACCCCGATTGGAGTCCGGCGGCGATAAGATCGGCGATGATGACGACTGCTGGTATCACCAATAATCAGAACAAAACCATGACTGATGAAGCTACTGGAAACCCCTCCACTCCTTATGATTTAGGGGCGGGTCATTTGAATTTGGAGCGGGCCATGGACCCGGGTCTGGTATATGATATCACCGGCGAGGATTACGTCCAGTTTCTCTGCTCGGTCGGGTACGGGCCGAGAGTAATCCAGGTGATCACTCGGTCGCCGCCCAAATGTCCGGGGAAAAAGACTTCGCCGGGAAATCTGAACTACCCGTCAATCGCGGCGTTGTTTCCGACTTCCGCGGCGGGGCTGTCCAGCAAGACGTTTATTCGGACGGTGACGAATGTGGGCCAGCCCAATGCGGTGTACAGGCCCATGATAGAGGCGCCGAAAGGAGTGAAGGTGACGGTGAAGCCGTCGAAGCTGGTGTTCACGGAGGCGGTGAAGAAGCTGAGCTACTTGGTGACGGTGGCGGTGGATAGGAGCAACATGGTGTTGGGTGAGTCGGGTGGGGTGTTCGGGTCGCTGTATTGGAGCGATGGGAAGCAGCATGTGGTTCGGAGCCCCATTGTGGTGACCCAAATGGATCCCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

771

Amino Acids

81.66

Weight (kDa)

8.91

Isoelectric Point (pI)

34.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	39 - 102	8.8e-13	Peptidase inhibitor I9
Peptidase_S8	PF00082	125 - 595	9.8e-47	Subtilase family
PA	PF02225	374 - 460	2.1e-13	PA domain
fn3_6	PF17766	660 - 765	1.5e-27	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34980
fragaria_vesca	FvH4_2g01410 FvH4_3g19440
malus_domestica	MD05G1120100.v1.1 MD10G1123500.v1.1
prunus_persica	Prupe.8G164000_v2.0.a1
pyrus_communis	pycom05g11390 pycom10g10580
rosa_chinensis	RchiOBHm_Chr6g0244021 RchiOBHm_Chr6g0252351 RchiOBHm_Chr6g0252361
rosa_laevigata	RLG00000015390 RLG00000029339
rosa_multiflora	Rmu_co8423929.1_g000001 Rmu_sc0001251.1_g000002 Rmu_sc0006415.1_g000012 Rmu_sc0006711.1_g000006 Rmu_sc0007419.1_g000002
rosa_roxburghii	Rroxscaffold_6G00388820 Rroxscaffold_6G00388840
rosa_rugosa	Rorug05G0223500 Rorug05G0506700 Rorug05G0515900
rosa_samantha	Rh1CG388200 Rh2AG211900 Rh3DG088300 Rh5BG286100 Rh5DG294800 Rh6AG021200 Rh6CG013400 Rh6DG014700
rosa_wichuraiana	Rw6G001740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	386
AatII	GACGTC	2 cut(s)	384, 837
Acc16I	TGCGCA	1 cut(s)	924
AccB1I	GGYRCC	4 cut(s)	914, 991, 1361, 2104
AccBSI	CCGCTC	4 cut(s)	315, 1659, 1670, 1834
AccI	GTMKAC	2 cut(s)	192, 750
AccII	CGCG	3 cut(s)	1192, 2000, 2021
AccIII	TCCGGA	1 cut(s)	1076
AclWI	GGATC	6 cut(s)	884, 913, 1282, 1533, 2300, 2313
AcoI	YGGCCR	5 cut(s)	413, 634, 667, 798, 1063
AcsI	RAATTY	4 cut(s)	180, 494, 608, 1825
AcuI	CTGAAG	5 cut(s)	82, 1127, 1398, 1538, 1697
AcvI	CACGTG	2 cut(s)	277, 1654
AcyI	GRCGYC	8 cut(s)	381, 627, 834, 915, 992, 1362, 1377, 2105
AfaI	GTAC	5 cut(s)	152, 674, 1121, 1907, 2087
AfiI	CCNNNNNNNGG	8 cut(s)	669, 951, 1045, 1109, 1195, 1852, 2025, 2290
AflIII	ACRYGT	1 cut(s)	276
AgsI	TTSAA	4 cut(s)	608, 843, 1504, 1825
AjnI	CCWGG	6 cut(s)	327, 987, 1182, 1290, 1431, 1923
AjuI	GAANNNNNNNTTGG	2 cut(s)	725, 757
Alw21I	GWGCWC	2 cut(s)	535, 1102
Alw26I	GTCTC	4 cut(s)	618, 621, 1063, 1399
AlwI	GGATC	6 cut(s)	884, 913, 1282, 1533, 2300, 2313
AlwNI	CAGNNNCTG	1 cut(s)	328
Ama87I	CYCGRG	2 cut(s)	1627, 1846
Aor13HI	TCCGGA	1 cut(s)	1076
ApaI	GGGCCC	1 cut(s)	1580
ApeKI	GCWGC	5 cut(s)	920, 1352, 1556, 1643, 2266
ApoI	RAATTY	4 cut(s)	180, 494, 608, 1825
ArsI	GACNNNNNNTTYG	2 cut(s)	1308, 1340
Asp700I	GAANNNNTTC	1 cut(s)	89
AspA2I	CCTAGG	1 cut(s)	1054
AspLEI	GCGC	5 cut(s)	917, 925, 994, 1364, 2107
AsuII	TTCGAA	1 cut(s)	282
AvaI	CYCGRG	2 cut(s)	1627, 1846
AvaII	GGWCC	7 cut(s)	449, 578, 962, 1051, 1186, 1563, 1843
AvrII	CCTAGG	1 cut(s)	1054
BaeGI	GKGCMC	1 cut(s)	1580
BaeI	ACNNNNGTAYC	2 cut(s)	393, 426
BamHI	GGATCC	1 cut(s)	2305
BanI	GGYRCC	4 cut(s)	914, 991, 1361, 2104
BanII	GRGCYC	6 cut(s)	69, 354, 535, 1102, 1580, 2285
BarI	GAAGNNNNNNTAC	2 cut(s)	2159, 2191
BbrPI	CACGTG	2 cut(s)	277, 1654
BbsI	GAAGAC	2 cut(s)	92, 291
Bbv12I	GWGCWC	2 cut(s)	535, 1102
BbvCI	CCTCAGC	1 cut(s)	251
BbvI	GCAGC	5 cut(s)	907, 1364, 1543, 1630, 2278
BccI	CCATC	2 cut(s)	857, 2252
BcgI	CGANNNNNNTGC	4 cut(s)	878, 912, 2258, 2292
BciT130I	CCWGG	6 cut(s)	329, 989, 1184, 1292, 1433, 1925
BclI	TGATCA	1 cut(s)	1929
BcoDI	GTCTC	4 cut(s)	618, 621, 1063, 1399
BfaI	CTAG	1 cut(s)	1055
BfoI	RGCGCY	4 cut(s)	918, 995, 1365, 2108
BglI	GCCNNNNNGGC	3 cut(s)	683, 809, 1385
BlnI	CCTAGG	1 cut(s)	1054
BlpI	GCTNAGC	1 cut(s)	2171
Bme18I	GGWCC	7 cut(s)	449, 578, 962, 1051, 1186, 1563, 1843
BmeT110I	CYCGRG	2 cut(s)	1627, 1846
BmsI	GCATC	2 cut(s)	720, 1321
BoxI	GACNNNNGTC	2 cut(s)	1191, 1848
BpiI	GAAGAC	2 cut(s)	92, 291
BpmI	CTGGAG	1 cut(s)	426
Bpu10I	CCTNAGC	1 cut(s)	251
Bpu1102I	GCTNAGC	1 cut(s)	2171
Bpu14I	TTCGAA	1 cut(s)	282
BsaAI	YACGTR	2 cut(s)	277, 1654
BsaBI	GATNNNNATC	3 cut(s)	441, 899, 1335
BsaHI	GRCGYC	8 cut(s)	381, 627, 834, 915, 992, 1362, 1377, 2105
BsaI	GGTCTC	1 cut(s)	621
BsaWI	WCCGGW	6 cut(s)	485, 612, 773, 1076, 1462, 1602
Bsc4I	CCNNNNNNNGG	8 cut(s)	669, 951, 1045, 1109, 1195, 1852, 2025, 2290
Bse118I	RCCGGY	5 cut(s)	572, 665, 669, 1456, 1868
Bse1I	ACTGG	5 cut(s)	133, 152, 409, 1786, 1885
Bse8I	GATNNNNATC	3 cut(s)	441, 899, 1335
BseAI	TCCGGA	1 cut(s)	1076
BseBI	CCWGG	6 cut(s)	329, 989, 1184, 1292, 1433, 1925
BseGI	GGATG	2 cut(s)	1290, 1548
BseJI	GATNNNNATC	3 cut(s)	441, 899, 1335
BseLI	CCNNNNNNNGG	8 cut(s)	669, 951, 1045, 1109, 1195, 1852, 2025, 2290
BseMII	CTCAG	6 cut(s)	65, 241, 265, 326, 615, 2162
BseNI	ACTGG	5 cut(s)	133, 152, 409, 1786, 1885
BseRI	GAGGAG	1 cut(s)	1387
BseSI	GKGCMC	1 cut(s)	1580
BseX3I	CGGCCG	2 cut(s)	667, 1063
BseXI	GCAGC	5 cut(s)	907, 1364, 1543, 1630, 2278
Bsh1236I	CGCG	3 cut(s)	1192, 2000, 2021
Bsh1285I	CGRYCG	5 cut(s)	670, 903, 1066, 1902, 1940
BshNI	GGYRCC	4 cut(s)	914, 991, 1361, 2104
BsiEI	CGRYCG	5 cut(s)	670, 903, 1066, 1902, 1940
BsiHKAI	GWGCWC	2 cut(s)	535, 1102
BsiHKCI	CYCGRG	2 cut(s)	1627, 1846
BslFI	GGGAC	2 cut(s)	655, 1450
BslI	CCNNNNNNNGG	8 cut(s)	669, 951, 1045, 1109, 1195, 1852, 2025, 2290
BsmAI	GTCTC	4 cut(s)	618, 621, 1063, 1399
BsmBI	CGTCTC	1 cut(s)	618
BsmFI	GGGAC	2 cut(s)	655, 1450
Bso31I	GGTCTC	1 cut(s)	621
BsoBI	CYCGRG	2 cut(s)	1627, 1846
Bsp119I	TTCGAA	1 cut(s)	282
Bsp120I	GGGCCC	1 cut(s)	1576
Bsp1286I	GDGCHC	6 cut(s)	69, 354, 535, 1102, 1580, 2285
Bsp13I	TCCGGA	1 cut(s)	1076
Bsp1407I	TGTACA	1 cut(s)	2085
Bsp1720I	GCTNAGC	1 cut(s)	2171
Bsp19I	CCATGG	3 cut(s)	208, 637, 1839
BspCNI	CTCAG	6 cut(s)	64, 240, 264, 327, 614, 2163
BspEI	TCCGGA	1 cut(s)	1076
BspFNI	CGCG	3 cut(s)	1192, 2000, 2021
BspPI	GGATC	6 cut(s)	884, 913, 1282, 1533, 2300, 2313
BspT104I	TTCGAA	1 cut(s)	282
BspT107I	GGYRCC	4 cut(s)	914, 991, 1361, 2104
BspTNI	GGTCTC	1 cut(s)	621
BsrBI	CCGCTC	4 cut(s)	315, 1659, 1670, 1834
BsrFI	RCCGGY	5 cut(s)	572, 665, 669, 1456, 1868
BsrGI	TGTACA	1 cut(s)	2085
BsrI	ACTGG	5 cut(s)	133, 152, 409, 1786, 1885
BssAI	RCCGGY	5 cut(s)	572, 665, 669, 1456, 1868
BssNAI	GTATAC	1 cut(s)	193
BssNI	GRCGYC	8 cut(s)	381, 627, 834, 915, 992, 1362, 1377, 2105
BssT1I	CCWWGG	4 cut(s)	208, 637, 1054, 1839
Bst1107I	GTATAC	1 cut(s)	193
Bst2UI	CCWGG	6 cut(s)	329, 989, 1184, 1292, 1433, 1925
Bst4CI	ACNGT	8 cut(s)	82, 202, 1009, 1167, 1441, 2056, 2128, 2188
BstACI	GRCGYC	8 cut(s)	381, 627, 834, 915, 992, 1362, 1377, 2105
BstAUI	TGTACA	1 cut(s)	2085
BstBAI	YACGTR	2 cut(s)	277, 1654
BstBI	TTCGAA	1 cut(s)	282
BstC8I	GCNNGC	8 cut(s)	299, 317, 574, 667, 688, 1458, 1836, 2072
BstDEI	CTNAG	6 cut(s)	51, 227, 251, 335, 601, 2171
BstDSI	CCRYGG	5 cut(s)	208, 637, 995, 1839, 2019
BstEII	GGTNACC	1 cut(s)	2293
BstF5I	GGATG	2 cut(s)	1290, 1548
BstFNI	CGCG	3 cut(s)	1192, 2000, 2021
BstH2I	RGCGCY	4 cut(s)	918, 995, 1365, 2108
BstHHI	GCGC	5 cut(s)	917, 925, 994, 1364, 2107
BstMAI	GTCTC	4 cut(s)	618, 621, 1063, 1399
BstMCI	CGRYCG	5 cut(s)	670, 903, 1066, 1902, 1940
BstMWI	GCNNNNNNNGC	8 cut(s)	569, 659, 683, 696, 809, 1361, 1385, 2140
BstNI	CCWGG	6 cut(s)	329, 989, 1184, 1292, 1433, 1925
BstNSI	RCATGY	2 cut(s)	694, 2273
BstPAI	GACNNNNGTC	2 cut(s)	1191, 1848
BstPI	GGTNACC	1 cut(s)	2293
BstSLI	GKGCMC	1 cut(s)	1580
BstUI	CGCG	3 cut(s)	1192, 2000, 2021
BstV1I	GCAGC	5 cut(s)	907, 1364, 1543, 1630, 2278
BstV2I	GAAGAC	2 cut(s)	92, 291
BstX2I	RGATCY	2 cut(s)	1525, 2305
BstYI	RGATCY	2 cut(s)	1525, 2305
BstZ17I	GTATAC	1 cut(s)	193
BstZI	CGGCCG	2 cut(s)	667, 1063
BtgI	CCRYGG	5 cut(s)	208, 637, 995, 1839, 2019
BtgZI	GCGATG	5 cut(s)	697, 876, 1344, 1736, 2271
BtsCI	GGATG	2 cut(s)	1290, 1548
BtsIMutI	CAGTG	2 cut(s)	145, 1163
Cac8I	GCNNGC	8 cut(s)	299, 317, 574, 667, 688, 1458, 1836, 2072
CaiI	CAGNNNCTG	1 cut(s)	328
CfoI	GCGC	5 cut(s)	917, 925, 994, 1364, 2107
Cfr10I	RCCGGY	5 cut(s)	572, 665, 669, 1456, 1868
Cfr42I	CCGCGG	1 cut(s)	2022
Cfr9I	CCCGGG	1 cut(s)	1846
CpoI	CGGWCCG	1 cut(s)	578
CseI	GACGC	5 cut(s)	410, 635, 1181, 1385, 1577
Csp6I	GTAC	5 cut(s)	151, 673, 1120, 1906, 2086
CspI	CGGWCCG	1 cut(s)	578
CviQI	GTAC	5 cut(s)	151, 673, 1120, 1906, 2086
DdeI	CTNAG	6 cut(s)	51, 227, 251, 335, 601, 2171
DinI	GGCGCC	4 cut(s)	916, 993, 1363, 2106
DrdI	GACNNNNNNGTC	1 cut(s)	386
DseDI	GACNNNNNNGTC	1 cut(s)	386
EaeI	YGGCCR	5 cut(s)	413, 634, 667, 798, 1063
EagI	CGGCCG	2 cut(s)	667, 1063
EciI	GGCGGA	1 cut(s)	937
Ecl136II	GAGCTC	2 cut(s)	533, 1100
EclXI	CGGCCG	2 cut(s)	667, 1063
Eco130I	CCWWGG	4 cut(s)	208, 637, 1054, 1839
Eco24I	GRGCYC	6 cut(s)	69, 354, 535, 1102, 1580, 2285
Eco31I	GGTCTC	1 cut(s)	621
Eco32I	GATATC	2 cut(s)	793, 1864
Eco47I	GGWCC	7 cut(s)	449, 578, 962, 1051, 1186, 1563, 1843
Eco52I	CGGCCG	2 cut(s)	667, 1063
Eco53kI	GAGCTC	2 cut(s)	533, 1100
Eco57I	CTGAAG	5 cut(s)	82, 1127, 1398, 1538, 1697
Eco72I	CACGTG	2 cut(s)	277, 1654
Eco88I	CYCGRG	2 cut(s)	1627, 1846
Eco91I	GGTNACC	1 cut(s)	2293
EcoICRI	GAGCTC	2 cut(s)	533, 1100
EcoO65I	GGTNACC	1 cut(s)	2293
EcoRI	GAATTC	1 cut(s)	608
EcoRII	CCWGG	6 cut(s)	327, 987, 1182, 1290, 1431, 1923
EcoRV	GATATC	2 cut(s)	793, 1864
EcoT14I	CCWWGG	4 cut(s)	208, 637, 1054, 1839
EcoT38I	GRGCYC	6 cut(s)	69, 354, 535, 1102, 1580, 2285
EgeI	GGCGCC	4 cut(s)	916, 993, 1363, 2106
EheI	GGCGCC	4 cut(s)	916, 993, 1363, 2106
ErhI	CCWWGG	4 cut(s)	208, 637, 1054, 1839
Esp3I	CGTCTC	1 cut(s)	618
FaqI	GGGAC	2 cut(s)	655, 1450
FauI	CCCGC	7 cut(s)	271, 320, 1131, 1197, 1807, 1827, 2017
FbaI	TGATCA	1 cut(s)	1929
FblI	GTMKAC	2 cut(s)	192, 750
FokI	GGATG	2 cut(s)	1297, 1535
FriOI	GRGCYC	6 cut(s)	69, 354, 535, 1102, 1580, 2285
FspBI	CTAG	1 cut(s)	1055
FspI	TGCGCA	1 cut(s)	924
GlaI	GCGC	5 cut(s)	916, 924, 993, 1363, 2106
GsuI	CTGGAG	1 cut(s)	426
HaeII	RGCGCY	4 cut(s)	918, 995, 1365, 2108
HgaI	GACGC	5 cut(s)	410, 635, 1181, 1385, 1577
HhaI	GCGC	5 cut(s)	917, 925, 994, 1364, 2107
Hin1I	GRCGYC	8 cut(s)	381, 627, 834, 915, 992, 1362, 1377, 2105
Hin6I	GCGC	5 cut(s)	915, 923, 992, 1362, 2105
HinP1I	GCGC	5 cut(s)	915, 923, 992, 1362, 2105
HincII	GTYRAC	3 cut(s)	820, 832, 1546
HindII	GTYRAC	3 cut(s)	820, 832, 1546
Hpy166II	GTNNAC	9 cut(s)	153, 193, 751, 820, 832, 1546, 1563, 2086, 2151
Hpy188III	TCNNGA	3 cut(s)	887, 1077, 1629
Hpy8I	GTNNAC	9 cut(s)	153, 193, 751, 820, 832, 1546, 1563, 2086, 2151
HpyCH4III	ACNGT	8 cut(s)	82, 202, 1009, 1167, 1441, 2056, 2128, 2188
HpyCH4IV	ACGT	7 cut(s)	189, 276, 381, 834, 1653, 1881, 2042
HpyCH4V	TGCA	3 cut(s)	221, 513, 1170
HpyF10VI	GCNNNNNNNGC	8 cut(s)	569, 659, 683, 696, 809, 1361, 1385, 2140
HpyF3I	CTNAG	6 cut(s)	51, 227, 251, 335, 601, 2171
HpySE526I	ACGT	7 cut(s)	189, 276, 381, 834, 1653, 1881, 2042
Hsp92I	GRCGYC	8 cut(s)	381, 627, 834, 915, 992, 1362, 1377, 2105
HspAI	GCGC	5 cut(s)	915, 923, 992, 1362, 2105
KasI	GGCGCC	4 cut(s)	914, 991, 1361, 2104
Kpn2I	TCCGGA	1 cut(s)	1076
KroI	GCCGGC	3 cut(s)	572, 665, 1456
KroNI	GCCGGC	3 cut(s)	574, 667, 1458
Ksp22I	TGATCA	1 cut(s)	1929
KspI	CCGCGG	1 cut(s)	2022
Lsp1109I	GCAGC	5 cut(s)	907, 1364, 1543, 1630, 2278
LweI	GCATC	2 cut(s)	720, 1321
MaeI	CTAG	1 cut(s)	1055
MaeII	ACGT	7 cut(s)	189, 276, 381, 834, 1653, 1881, 2042
MaeIII	GTNAC	6 cut(s)	979, 1373, 2056, 2122, 2182, 2293
MbiI	CCGCTC	4 cut(s)	315, 1659, 1670, 1834
MfeI	CAATTG	2 cut(s)	849, 1023
MflI	RGATCY	2 cut(s)	1525, 2305
MhlI	GDGCHC	6 cut(s)	69, 354, 535, 1102, 1580, 2285
MluCI	AATT	8 cut(s)	180, 494, 508, 608, 849, 1023, 1215, 1825
Mly113I	GGCGCC	4 cut(s)	915, 992, 1362, 2105
MlyI	GAGTC	7 cut(s)	764, 779, 1065, 1402, 1551, 1708, 2231
MmeI	TCCRAC	6 cut(s)	339, 404, 991, 1332, 1569, 2036
MroI	TCCGGA	1 cut(s)	1076
MroNI	GCCGGC	3 cut(s)	572, 665, 1456
MroXI	GAANNNNTTC	1 cut(s)	89
MseI	TTAA	2 cut(s)	492, 1617
MslI	CAYNNNNRTG	1 cut(s)	2291
MspA1I	CMGCKG	5 cut(s)	920, 1105, 1126, 1355, 2021
MunI	CAATTG	2 cut(s)	849, 1023
MvaI	CCWGG	6 cut(s)	329, 989, 1184, 1292, 1433, 1925
MvnI	CGCG	3 cut(s)	1192, 2000, 2021
MwoI	GCNNNNNNNGC	8 cut(s)	569, 659, 683, 696, 809, 1361, 1385, 2140
NaeI	GCCGGC	3 cut(s)	574, 667, 1458
NarI	GGCGCC	4 cut(s)	915, 992, 1362, 2105
NcoI	CCATGG	3 cut(s)	208, 637, 1839
NgoMIV	GCCGGC	3 cut(s)	572, 665, 1456
NmeAIII	GCCGAG	1 cut(s)	1938
NmuCI	GTSAC	6 cut(s)	979, 1373, 2056, 2122, 2182, 2293
NsbI	TGCGCA	1 cut(s)	924
NspI	RCATGY	2 cut(s)	694, 2273
NspV	TTCGAA	1 cut(s)	282
PcsI	WCGNNNNNNNCGW	7 cut(s)	378, 396, 813, 831, 1218, 1365, 2132
PdiI	GCCGGC	3 cut(s)	574, 667, 1458
PdmI	GAANNNNTTC	1 cut(s)	89
PfeI	GAWTC	8 cut(s)	59, 102, 111, 362, 442, 1302, 1449, 1513
PflFI	GACNNNGTC	1 cut(s)	1379
PfoI	TCCNGGA	2 cut(s)	1135, 1537
Ple19I	CGATCG	1 cut(s)	903
PleI	GAGTC	7 cut(s)	764, 779, 1065, 1402, 1550, 1707, 2230
PluTI	GGCGCC	4 cut(s)	918, 995, 1365, 2108
PmaCI	CACGTG	2 cut(s)	277, 1654
PmlI	CACGTG	2 cut(s)	277, 1654
PpsI	GAGTC	7 cut(s)	764, 779, 1065, 1402, 1550, 1707, 2230
Ppu21I	YACGTR	2 cut(s)	277, 1654
PshAI	GACNNNNGTC	2 cut(s)	1191, 1848
Psp124BI	GAGCTC	2 cut(s)	535, 1102
Psp6I	CCWGG	6 cut(s)	327, 987, 1182, 1290, 1431, 1923
PspCI	CACGTG	2 cut(s)	277, 1654
PspEI	GGTNACC	1 cut(s)	2293
PspGI	CCWGG	6 cut(s)	327, 987, 1182, 1290, 1431, 1923
PspOMI	GGGCCC	1 cut(s)	1576
PstNI	CAGNNNCTG	1 cut(s)	328
PsuI	RGATCY	2 cut(s)	1525, 2305
PsyI	GACNNNGTC	1 cut(s)	1379
PvuI	CGATCG	1 cut(s)	903
PvuII	CAGCTG	1 cut(s)	1355
RsaI	GTAC	5 cut(s)	152, 674, 1121, 1907, 2087
RsaNI	GTAC	5 cut(s)	151, 673, 1120, 1906, 2086
RseI	CAYNNNNRTG	1 cut(s)	2291
Rsr2I	CGGWCCG	1 cut(s)	578
RsrII	CGGWCCG	1 cut(s)	578
SacI	GAGCTC	2 cut(s)	535, 1102
SacII	CCGCGG	1 cut(s)	2022
SaqAI	TTAA	2 cut(s)	492, 1617
SchI	GAGTC	7 cut(s)	764, 779, 1065, 1402, 1551, 1708, 2231
SduI	GDGCHC	6 cut(s)	69, 354, 535, 1102, 1580, 2285
SfaNI	GCATC	2 cut(s)	720, 1321
SfoI	GGCGCC	4 cut(s)	916, 993, 1363, 2106
Sfr303I	CCGCGG	1 cut(s)	2022
SfuI	TTCGAA	1 cut(s)	282
SgrAI	CRCCGGYG	1 cut(s)	1868
SgrBI	CCGCGG	1 cut(s)	2022
SinI	GGWCC	7 cut(s)	449, 578, 962, 1051, 1186, 1563, 1843
SmaI	CCCGGG	1 cut(s)	1848
SmiMI	CAYNNNNRTG	1 cut(s)	2291
Sse9I	AATT	8 cut(s)	180, 494, 508, 608, 849, 1023, 1215, 1825
SspDI	GGCGCC	4 cut(s)	914, 991, 1361, 2104
SspMI	CTAG	1 cut(s)	1055
SstI	GAGCTC	2 cut(s)	535, 1102
StyI	CCWWGG	4 cut(s)	208, 637, 1054, 1839
TaaI	ACNGT	8 cut(s)	82, 202, 1009, 1167, 1441, 2056, 2128, 2188
TaiI	ACGT	7 cut(s)	192, 279, 384, 837, 1656, 1884, 2045
TaqII	GACCGA	4 cut(s)	437, 1580, 1888, 1926
TasI	AATT	8 cut(s)	180, 494, 508, 608, 849, 1023, 1215, 1825
TatI	WGTACW	1 cut(s)	2085
TfiI	GAWTC	8 cut(s)	59, 102, 111, 362, 442, 1302, 1449, 1513
Tru1I	TTAA	2 cut(s)	492, 1617
Tru9I	TTAA	2 cut(s)	492, 1617
TscAI	CASTG	2 cut(s)	152, 1170
TseFI	GTSAC	6 cut(s)	979, 1373, 2056, 2122, 2182, 2293
TseI	GCWGC	5 cut(s)	920, 1352, 1556, 1643, 2266
Tsp45I	GTSAC	6 cut(s)	979, 1373, 2056, 2122, 2182, 2293
TspDTI	ATGAA	5 cut(s)	22, 34, 82, 532, 1788
TspGWI	ACGGA	4 cut(s)	975, 984, 1314, 2168
TspMI	CCCGGG	1 cut(s)	1846
TspRI	CASTG	2 cut(s)	152, 1170
Tth111I	GACNNNGTC	1 cut(s)	1379
VpaK11BI	GGWCC	7 cut(s)	449, 578, 962, 1051, 1186, 1563, 1843
XapI	RAATTY	4 cut(s)	180, 494, 608, 1825
XceI	RCATGY	2 cut(s)	694, 2273
XmaI	CCCGGG	1 cut(s)	1846
XmaJI	CCTAGG	1 cut(s)	1054
XmiI	GTMKAC	2 cut(s)	192, 750
XmnI	GAANNNNTTC	1 cut(s)	89
XspI	CTAG	1 cut(s)	1055
ZraI	GACGTC	2 cut(s)	382, 835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.