DNA-damage-repair toleration protein DRT111
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0315271 RchiOBHm_Chr2g0157291 RchiOBHm_Chr5g0034521 RchiOBHm_Chr5g0043701 RchiOBHm_Chr5g0072341 |
| rosa_laevigata | RLG00000006199 RLG00000014447 |
| rosa_multiflora | Rmu_sc0000404.1_g000005 Rmu_sc0000663.1_g000020 Rmu_sc0006798.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00044040 Rroxscaffold_2G00127590 Rroxscaffold_2G00128420 Rroxscaffold_5G00373610 Rroxscaffold_6G00425320 |
| rosa_rugosa | Rorug07G0259600 |
| rosa_samantha | Rh1AG066800 Rh1CG269600 Rh2CG273500 Rh5AG473900 Rh5BG015900 Rh5CG271900 Rh5DG308400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 130 |
| AclWI | GGATC | 1 cut(s) | 115 |
| AcoI | YGGCCR | 1 cut(s) | 109 |
| AfaI | GTAC | 2 cut(s) | 203, 236 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 130 |
| AgsI | TTSAA | 1 cut(s) | 401 |
| AjnI | CCWGG | 1 cut(s) | 212 |
| AluBI | AGCT | 2 cut(s) | 286, 359 |
| AluI | AGCT | 2 cut(s) | 286, 359 |
| Alw26I | GTCTC | 1 cut(s) | 133 |
| AlwI | GGATC | 1 cut(s) | 115 |
| AoxI | GGCC | 1 cut(s) | 109 |
| AsuHPI | GGTGA | 1 cut(s) | 286 |
| BalI | TGGCCA | 1 cut(s) | 111 |
| BbsI | GAAGAC | 2 cut(s) | 182, 304 |
| BccI | CCATC | 2 cut(s) | 256, 359 |
| BciT130I | CCWGG | 1 cut(s) | 214 |
| BcoDI | GTCTC | 1 cut(s) | 133 |
| BfaI | CTAG | 1 cut(s) | 209 |
| Bme1390I | CCNGG | 1 cut(s) | 214 |
| BmrFI | CCNGG | 1 cut(s) | 214 |
| BmsI | GCATC | 1 cut(s) | 180 |
| BpiI | GAAGAC | 2 cut(s) | 182, 304 |
| Bpu10I | CCTNAGC | 1 cut(s) | 270 |
| Bsa29I | ATCGAT | 1 cut(s) | 75 |
| BsaI | GGTCTC | 1 cut(s) | 133 |
| BsaJI | CCNNGG | 1 cut(s) | 129 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 130 |
| BseBI | CCWGG | 1 cut(s) | 214 |
| BseCI | ATCGAT | 1 cut(s) | 75 |
| BseDI | CCNNGG | 1 cut(s) | 129 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BseMII | CTCAG | 1 cut(s) | 351 |
| BseRI | GAGGAG | 5 cut(s) | 292, 341, 385, 388, 391 |
| BshFI | GGCC | 1 cut(s) | 111 |
| BshVI | ATCGAT | 1 cut(s) | 75 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BsmAI | GTCTC | 1 cut(s) | 133 |
| BsnI | GGCC | 1 cut(s) | 111 |
| Bso31I | GGTCTC | 1 cut(s) | 133 |
| Bsp143I | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| BspANI | GGCC | 1 cut(s) | 111 |
| BspCNI | CTCAG | 1 cut(s) | 352 |
| BspDI | ATCGAT | 1 cut(s) | 75 |
| BspPI | GGATC | 1 cut(s) | 115 |
| BspTNI | GGTCTC | 1 cut(s) | 133 |
| BssECI | CCNNGG | 1 cut(s) | 129 |
| BssMI | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| BssT1I | CCWWGG | 1 cut(s) | 129 |
| Bst2UI | CCWGG | 1 cut(s) | 214 |
| Bst6I | CTCTTC | 2 cut(s) | 192, 303 |
| BstDEI | CTNAG | 2 cut(s) | 270, 360 |
| BstKTI | GATC | 6 cut(s) | 14, 42, 75, 123, 208, 292 |
| BstMAI | GTCTC | 1 cut(s) | 133 |
| BstMBI | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 266 |
| BstNI | CCWGG | 1 cut(s) | 214 |
| BstSCI | CCNGG | 1 cut(s) | 212 |
| BstV2I | GAAGAC | 2 cut(s) | 182, 304 |
| Bsu15I | ATCGAT | 1 cut(s) | 75 |
| BsuRI | GGCC | 1 cut(s) | 111 |
| BsuTUI | ATCGAT | 1 cut(s) | 75 |
| BtgZI | GCGATG | 1 cut(s) | 275 |
| ClaI | ATCGAT | 1 cut(s) | 75 |
| Csp6I | GTAC | 2 cut(s) | 202, 235 |
| CviAII | CATG | 1 cut(s) | 6 |
| CviJI | RGCY | 7 cut(s) | 55, 111, 212, 269, 286, 359, 416 |
| CviKI_1 | RGCY | 7 cut(s) | 55, 111, 212, 269, 286, 359, 416 |
| CviQI | GTAC | 2 cut(s) | 202, 235 |
| DdeI | CTNAG | 2 cut(s) | 270, 360 |
| DpnI | GATC | 6 cut(s) | 13, 41, 74, 122, 207, 291 |
| DpnII | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| EaeI | YGGCCR | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 2 cut(s) | 192, 303 |
| EarI | CTCTTC | 2 cut(s) | 192, 303 |
| Eco130I | CCWWGG | 1 cut(s) | 129 |
| Eco31I | GGTCTC | 1 cut(s) | 133 |
| EcoRII | CCWGG | 1 cut(s) | 212 |
| EcoT14I | CCWWGG | 1 cut(s) | 129 |
| ErhI | CCWWGG | 1 cut(s) | 129 |
| FaeI | CATG | 1 cut(s) | 9 |
| FaiI | YATR | 3 cut(s) | 7, 35, 68 |
| FatI | CATG | 1 cut(s) | 5 |
| FspBI | CTAG | 1 cut(s) | 209 |
| HaeIII | GGCC | 1 cut(s) | 111 |
| Hin1II | CATG | 1 cut(s) | 9 |
| HphI | GGTGA | 1 cut(s) | 286 |
| Hpy188I | TCNGA | 3 cut(s) | 120, 294, 356 |
| Hpy188III | TCNNGA | 1 cut(s) | 22 |
| HpyAV | CCTTC | 1 cut(s) | 250 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 266 |
| HpyF3I | CTNAG | 2 cut(s) | 270, 360 |
| Hsp92II | CATG | 1 cut(s) | 9 |
| Kzo9I | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| LpnPI | CCDG | 6 cut(s) | 185, 199, 207, 223, 226, 287 |
| LweI | GCATC | 1 cut(s) | 180 |
| MaeI | CTAG | 1 cut(s) | 209 |
| MalI | GATC | 6 cut(s) | 13, 41, 74, 122, 207, 291 |
| MboI | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| MboII | GAAGA | 8 cut(s) | 187, 193, 199, 209, 265, 309, 320, 398 |
| MlsI | TGGCCA | 1 cut(s) | 111 |
| MluNI | TGGCCA | 1 cut(s) | 111 |
| Mox20I | TGGCCA | 1 cut(s) | 111 |
| MscI | TGGCCA | 1 cut(s) | 111 |
| MseI | TTAA | 1 cut(s) | 421 |
| Msp20I | TGGCCA | 1 cut(s) | 111 |
| MspR9I | CCNGG | 1 cut(s) | 214 |
| MvaI | CCWGG | 1 cut(s) | 214 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 266 |
| NdeII | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| NlaIII | CATG | 1 cut(s) | 9 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 20 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 130 |
| Psp6I | CCWGG | 1 cut(s) | 212 |
| PspGI | CCWGG | 1 cut(s) | 212 |
| RsaI | GTAC | 2 cut(s) | 203, 236 |
| RsaNI | GTAC | 2 cut(s) | 202, 235 |
| SaqAI | TTAA | 1 cut(s) | 421 |
| Sau3AI | GATC | 6 cut(s) | 11, 39, 72, 120, 205, 289 |
| ScrFI | CCNGG | 1 cut(s) | 214 |
| SetI | ASST | 5 cut(s) | 98, 218, 276, 288, 361 |
| SfaNI | GCATC | 1 cut(s) | 180 |
| SspI | AATATT | 1 cut(s) | 394 |
| SspMI | CTAG | 1 cut(s) | 209 |
| StyD4I | CCNGG | 1 cut(s) | 212 |
| StyI | CCWWGG | 1 cut(s) | 129 |
| TaqI | TCGA | 4 cut(s) | 14, 42, 75, 218 |
| TatI | WGTACW | 1 cut(s) | 234 |
| Tru1I | TTAA | 1 cut(s) | 421 |
| Tru9I | TTAA | 1 cut(s) | 421 |
| TspDTI | ATGAA | 1 cut(s) | 200 |
| TspGWI | ACGGA | 1 cut(s) | 163 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 130 |
| XspI | CTAG | 1 cut(s) | 209 |