DNA-damage-repair toleration protein DRT111
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0315271 RchiOBHm_Chr2g0157291 RchiOBHm_Chr5g0034521 RchiOBHm_Chr5g0043701 RchiOBHm_Chr5g0072341 |
| rosa_laevigata | RLG00000006199 RLG00000014447 |
| rosa_multiflora | Rmu_sc0000404.1_g000005 Rmu_sc0000663.1_g000020 Rmu_sc0006798.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00044040 Rroxscaffold_2G00127590 Rroxscaffold_2G00128420 Rroxscaffold_5G00373610 Rroxscaffold_6G00425320 |
| rosa_rugosa | Rorug07G0259600 |
| rosa_samantha | Rh1AG066800 Rh1CG269600 Rh2CG273500 Rh5AG473900 Rh5BG015900 Rh5CG271900 Rh5DG308400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 215 |
| AclWI | GGATC | 3 cut(s) | 91, 140, 253 |
| AcoI | YGGCCR | 1 cut(s) | 255 |
| AfaI | GTAC | 2 cut(s) | 176, 280 |
| AjnI | CCWGG | 1 cut(s) | 152 |
| AluBI | AGCT | 1 cut(s) | 31 |
| AluI | AGCT | 1 cut(s) | 31 |
| AlwI | GGATC | 3 cut(s) | 91, 140, 253 |
| AoxI | GGCC | 2 cut(s) | 155, 255 |
| BalI | TGGCCA | 1 cut(s) | 257 |
| BbsI | GAAGAC | 1 cut(s) | 116 |
| BccI | CCATC | 1 cut(s) | 196 |
| BciT130I | CCWGG | 1 cut(s) | 154 |
| BfaI | CTAG | 1 cut(s) | 275 |
| BisI | GCNGC | 1 cut(s) | 216 |
| BlpI | GCTNAGC | 1 cut(s) | 211 |
| BlsI | GCNGC | 1 cut(s) | 217 |
| Bme1390I | CCNGG | 1 cut(s) | 154 |
| BmrFI | CCNGG | 1 cut(s) | 154 |
| BmsI | GCATC | 1 cut(s) | 120 |
| BpiI | GAAGAC | 1 cut(s) | 116 |
| Bpu10I | CCTNAGC | 1 cut(s) | 27 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 211 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BseBI | CCWGG | 1 cut(s) | 154 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BshFI | GGCC | 2 cut(s) | 157, 257 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| BsiSI | CCGG | 1 cut(s) | 134 |
| BsnI | GGCC | 2 cut(s) | 157, 257 |
| Bsp143I | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 211 |
| BspACI | CCGC | 1 cut(s) | 215 |
| BspANI | GGCC | 2 cut(s) | 157, 257 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspPI | GGATC | 3 cut(s) | 91, 140, 253 |
| BssMI | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| Bst2UI | CCWGG | 1 cut(s) | 154 |
| Bst4CI | ACNGT | 1 cut(s) | 265 |
| Bst6I | CTCTTC | 1 cut(s) | 132 |
| BstDEI | CTNAG | 2 cut(s) | 27, 211 |
| BstKTI | GATC | 5 cut(s) | 18, 51, 99, 148, 248 |
| BstMBI | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| BstNI | CCWGG | 1 cut(s) | 154 |
| BstSCI | CCNGG | 1 cut(s) | 152 |
| BstV2I | GAAGAC | 1 cut(s) | 116 |
| BstX2I | RGATCY | 1 cut(s) | 245 |
| BstYI | RGATCY | 1 cut(s) | 245 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| BsuRI | GGCC | 2 cut(s) | 157, 257 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtgZI | GCGATG | 1 cut(s) | 215 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| Csp6I | GTAC | 2 cut(s) | 175, 279 |
| CviAII | CATG | 1 cut(s) | 282 |
| CviJI | RGCY | 5 cut(s) | 31, 64, 157, 210, 257 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 64, 157, 210, 257 |
| CviQI | GTAC | 2 cut(s) | 175, 279 |
| DdeI | CTNAG | 2 cut(s) | 27, 211 |
| DpnI | GATC | 5 cut(s) | 17, 50, 98, 147, 247 |
| DpnII | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| EaeI | YGGCCR | 1 cut(s) | 255 |
| Eam1104I | CTCTTC | 1 cut(s) | 132 |
| EarI | CTCTTC | 1 cut(s) | 132 |
| EcoRII | CCWGG | 1 cut(s) | 152 |
| FaeI | CATG | 1 cut(s) | 285 |
| FaiI | YATR | 5 cut(s) | 11, 42, 44, 144, 283 |
| FatI | CATG | 1 cut(s) | 281 |
| Fnu4HI | GCNGC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 1 cut(s) | 216 |
| FspBI | CTAG | 1 cut(s) | 275 |
| GluI | GCNGC | 1 cut(s) | 216 |
| HaeIII | GGCC | 2 cut(s) | 157, 257 |
| HapII | CCGG | 1 cut(s) | 134 |
| Hin1II | CATG | 1 cut(s) | 285 |
| HpaII | CCGG | 1 cut(s) | 134 |
| Hpy188I | TCNGA | 1 cut(s) | 96 |
| HpyAV | CCTTC | 1 cut(s) | 190 |
| HpyCH4III | ACNGT | 1 cut(s) | 265 |
| HpyF3I | CTNAG | 2 cut(s) | 27, 211 |
| Hsp92II | CATG | 1 cut(s) | 285 |
| Kzo9I | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| LpnPI | CCDG | 5 cut(s) | 119, 139, 147, 163, 166 |
| LweI | GCATC | 1 cut(s) | 120 |
| MaeI | CTAG | 1 cut(s) | 275 |
| MalI | GATC | 5 cut(s) | 17, 50, 98, 147, 247 |
| MboI | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| MboII | GAAGA | 6 cut(s) | 121, 127, 149, 205, 232, 235 |
| MflI | RGATCY | 1 cut(s) | 245 |
| MlsI | TGGCCA | 1 cut(s) | 257 |
| MluNI | TGGCCA | 1 cut(s) | 257 |
| MmeI | TCCRAC | 1 cut(s) | 173 |
| MnlI | CCTC | 3 cut(s) | 82, 174, 199 |
| Mox20I | TGGCCA | 1 cut(s) | 257 |
| MscI | TGGCCA | 1 cut(s) | 257 |
| Msp20I | TGGCCA | 1 cut(s) | 257 |
| MspI | CCGG | 1 cut(s) | 134 |
| MspR9I | CCNGG | 1 cut(s) | 154 |
| MvaI | CCWGG | 1 cut(s) | 154 |
| NdeII | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| NlaIII | CATG | 1 cut(s) | 285 |
| PkrI | GCNGC | 1 cut(s) | 217 |
| Psp6I | CCWGG | 1 cut(s) | 152 |
| PspGI | CCWGG | 1 cut(s) | 152 |
| PsuI | RGATCY | 1 cut(s) | 245 |
| RsaI | GTAC | 2 cut(s) | 176, 280 |
| RsaNI | GTAC | 2 cut(s) | 175, 279 |
| SatI | GCNGC | 1 cut(s) | 216 |
| Sau3AI | GATC | 5 cut(s) | 15, 48, 96, 145, 245 |
| ScrFI | CCNGG | 1 cut(s) | 154 |
| SetI | ASST | 3 cut(s) | 33, 74, 280 |
| SfaNI | GCATC | 1 cut(s) | 120 |
| SgeI | CNNG | 7 cut(s) | 73, 118, 146, 165, 166, 190, 241 |
| SsiI | CCGC | 1 cut(s) | 215 |
| SspMI | CTAG | 1 cut(s) | 275 |
| StyD4I | CCNGG | 1 cut(s) | 152 |
| TaaI | ACNGT | 1 cut(s) | 265 |
| TaqI | TCGA | 2 cut(s) | 18, 51 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TauI | GCSGC | 1 cut(s) | 218 |
| TspDTI | ATGAA | 1 cut(s) | 134 |
| XspI | CTAG | 1 cut(s) | 275 |