DNA-damage-repair toleration protein DRT111
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0315271 RchiOBHm_Chr2g0157291 RchiOBHm_Chr5g0034521 RchiOBHm_Chr5g0043701 RchiOBHm_Chr5g0072341 |
| rosa_laevigata | RLG00000006199 RLG00000014447 |
| rosa_multiflora | Rmu_sc0000404.1_g000005 Rmu_sc0000663.1_g000020 Rmu_sc0006798.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00044040 Rroxscaffold_2G00127590 Rroxscaffold_2G00128420 Rroxscaffold_5G00373610 Rroxscaffold_6G00425320 |
| rosa_rugosa | Rorug07G0259600 |
| rosa_samantha | Rh1AG066800 Rh1CG269600 Rh2CG273500 Rh5AG473900 Rh5BG015900 Rh5CG271900 Rh5DG308400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 295 |
| AccI | GTMKAC | 1 cut(s) | 273 |
| AccII | CGCG | 1 cut(s) | 170 |
| AciI | CCGC | 1 cut(s) | 170 |
| AclWI | GGATC | 3 cut(s) | 91, 140, 340 |
| AfaI | GTAC | 1 cut(s) | 176 |
| AgsI | TTSAA | 3 cut(s) | 239, 382, 389 |
| AluBI | AGCT | 3 cut(s) | 31, 325, 364 |
| AluI | AGCT | 3 cut(s) | 31, 325, 364 |
| AlwI | GGATC | 3 cut(s) | 91, 140, 340 |
| AspLEI | GCGC | 1 cut(s) | 296 |
| AsuHPI | GGTGA | 3 cut(s) | 221, 235, 256 |
| BbsI | GAAGAC | 1 cut(s) | 116 |
| BccI | CCATC | 1 cut(s) | 196 |
| BmsI | GCATC | 1 cut(s) | 120 |
| BpiI | GAAGAC | 1 cut(s) | 116 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BsaJI | CCNNGG | 1 cut(s) | 349 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BseDI | CCNNGG | 1 cut(s) | 349 |
| Bsh1236I | CGCG | 1 cut(s) | 170 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| Bsp143I | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| BspACI | CCGC | 1 cut(s) | 170 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspFNI | CGCG | 1 cut(s) | 170 |
| BspPI | GGATC | 3 cut(s) | 91, 140, 340 |
| BssECI | CCNNGG | 1 cut(s) | 349 |
| BssMI | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| BssT1I | CCWWGG | 1 cut(s) | 349 |
| Bst6I | CTCTTC | 1 cut(s) | 132 |
| BstDEI | CTNAG | 1 cut(s) | 333 |
| BstFNI | CGCG | 1 cut(s) | 170 |
| BstHHI | GCGC | 1 cut(s) | 296 |
| BstKTI | GATC | 5 cut(s) | 18, 51, 99, 148, 348 |
| BstMBI | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| BstNSI | RCATGY | 1 cut(s) | 360 |
| BstUI | CGCG | 1 cut(s) | 170 |
| BstV2I | GAAGAC | 1 cut(s) | 116 |
| BstX2I | RGATCY | 1 cut(s) | 345 |
| BstYI | RGATCY | 1 cut(s) | 345 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtgZI | GCGATG | 1 cut(s) | 215 |
| CfoI | GCGC | 1 cut(s) | 296 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| Csp6I | GTAC | 1 cut(s) | 175 |
| CviAII | CATG | 2 cut(s) | 228, 357 |
| CviJI | RGCY | 7 cut(s) | 31, 64, 152, 157, 232, 325, 364 |
| CviKI_1 | RGCY | 7 cut(s) | 31, 64, 152, 157, 232, 325, 364 |
| CviQI | GTAC | 1 cut(s) | 175 |
| DdeI | CTNAG | 1 cut(s) | 333 |
| DpnI | GATC | 5 cut(s) | 17, 50, 98, 147, 347 |
| DpnII | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| Eam1104I | CTCTTC | 1 cut(s) | 132 |
| EarI | CTCTTC | 1 cut(s) | 132 |
| Eco130I | CCWWGG | 1 cut(s) | 349 |
| EcoT14I | CCWWGG | 1 cut(s) | 349 |
| ErhI | CCWWGG | 1 cut(s) | 349 |
| FaeI | CATG | 2 cut(s) | 231, 360 |
| FaiI | YATR | 6 cut(s) | 11, 44, 144, 229, 261, 358 |
| FatI | CATG | 2 cut(s) | 227, 356 |
| FblI | GTMKAC | 1 cut(s) | 273 |
| FspAI | RTGCGCAY | 1 cut(s) | 295 |
| FspI | TGCGCA | 1 cut(s) | 295 |
| GlaI | GCGC | 1 cut(s) | 295 |
| HhaI | GCGC | 1 cut(s) | 296 |
| Hin1II | CATG | 2 cut(s) | 231, 360 |
| Hin6I | GCGC | 1 cut(s) | 294 |
| HinP1I | GCGC | 1 cut(s) | 294 |
| HphI | GGTGA | 3 cut(s) | 221, 235, 256 |
| Hpy166II | GTNNAC | 1 cut(s) | 274 |
| Hpy188I | TCNGA | 1 cut(s) | 96 |
| Hpy8I | GTNNAC | 1 cut(s) | 274 |
| HpyAV | CCTTC | 1 cut(s) | 190 |
| HpyF3I | CTNAG | 1 cut(s) | 333 |
| Hsp92II | CATG | 2 cut(s) | 231, 360 |
| HspAI | GCGC | 1 cut(s) | 294 |
| Kzo9I | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| LmnI | GCTCC | 1 cut(s) | 353 |
| LpnPI | CCDG | 4 cut(s) | 119, 147, 162, 163 |
| LweI | GCATC | 1 cut(s) | 120 |
| MaeIII | GTNAC | 2 cut(s) | 223, 283 |
| MalI | GATC | 5 cut(s) | 17, 50, 98, 147, 347 |
| MboI | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| MboII | GAAGA | 5 cut(s) | 121, 127, 133, 149, 205 |
| MflI | RGATCY | 1 cut(s) | 345 |
| MnlI | CCTC | 6 cut(s) | 82, 174, 199, 205, 213, 298 |
| MvnI | CGCG | 1 cut(s) | 170 |
| NdeII | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| NlaIII | CATG | 2 cut(s) | 231, 360 |
| NmuCI | GTSAC | 1 cut(s) | 223 |
| NsbI | TGCGCA | 1 cut(s) | 295 |
| NspI | RCATGY | 1 cut(s) | 360 |
| PsuI | RGATCY | 1 cut(s) | 345 |
| RsaI | GTAC | 1 cut(s) | 176 |
| RsaNI | GTAC | 1 cut(s) | 175 |
| Sau3AI | GATC | 5 cut(s) | 15, 48, 96, 145, 345 |
| SetI | ASST | 7 cut(s) | 33, 74, 216, 301, 327, 339, 366 |
| SfaNI | GCATC | 1 cut(s) | 120 |
| SsiI | CCGC | 1 cut(s) | 170 |
| SspI | AATATT | 1 cut(s) | 250 |
| StyI | CCWWGG | 1 cut(s) | 349 |
| TaqI | TCGA | 2 cut(s) | 18, 51 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TseFI | GTSAC | 1 cut(s) | 223 |
| Tsp45I | GTSAC | 1 cut(s) | 223 |
| TspDTI | ATGAA | 1 cut(s) | 134 |
| XceI | RCATGY | 1 cut(s) | 360 |
| XmiI | GTMKAC | 1 cut(s) | 273 |