No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0323081 RchiOBHm_Chr2g0168921 RchiOBHm_Chr3g0488021 RchiOBHm_Chr7g0240151 |
| rosa_multiflora | Rmu_sc0000394.1_g000060 Rmu_sc0006867.1_g000028 Rmu_sc0015156.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00110370 Rroxscaffold_4G00296000 Rroxscaffold_4G00296010 Rroxscaffold_5G00378770 |
| rosa_rugosa | Rorug06G0510400 |
| rosa_samantha | Rh2BG204600 Rh2BG204700 Rh2BG440000 Rh2BG539600 Rh2DG026100 Rh2DG291000 Rh4CG266000 Rh5BG195600 Rh6AG373800 Rh6DG133200 Rh7CG424800 Rh7CG511100 |
| rosa_wichuraiana | Rw4G020380 Rw6G018910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 227 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AjnI | CCWGG | 2 cut(s) | 105, 129 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 288, 320 |
| AluBI | AGCT | 2 cut(s) | 155, 161 |
| AluI | AGCT | 2 cut(s) | 155, 161 |
| Alw26I | GTCTC | 1 cut(s) | 292 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| BbsI | GAAGAC | 1 cut(s) | 273 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BciT130I | CCWGG | 2 cut(s) | 107, 131 |
| BciVI | GTATCC | 1 cut(s) | 103 |
| BcoDI | GTCTC | 1 cut(s) | 292 |
| BfuI | GTATCC | 1 cut(s) | 103 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 188 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 131 |
| BmrFI | CCNGG | 2 cut(s) | 107, 131 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BpiI | GAAGAC | 1 cut(s) | 273 |
| BpuEI | CTTGAG | 3 cut(s) | 74, 140, 141 |
| BsaI | GGTCTC | 1 cut(s) | 292 |
| Bse1I | ACTGG | 1 cut(s) | 49 |
| BseBI | CCWGG | 2 cut(s) | 107, 131 |
| BseGI | GGATG | 1 cut(s) | 210 |
| BseNI | ACTGG | 1 cut(s) | 49 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsmAI | GTCTC | 1 cut(s) | 292 |
| BsnI | GGCC | 1 cut(s) | 95 |
| Bso31I | GGTCTC | 1 cut(s) | 292 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspTNI | GGTCTC | 1 cut(s) | 292 |
| BsrI | ACTGG | 1 cut(s) | 49 |
| Bst2UI | CCWGG | 2 cut(s) | 107, 131 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 1 cut(s) | 184 |
| BstF5I | GGATG | 1 cut(s) | 210 |
| BstMAI | GTCTC | 1 cut(s) | 292 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 188, 197 |
| BstNI | CCWGG | 2 cut(s) | 107, 131 |
| BstNSI | RCATGY | 1 cut(s) | 139 |
| BstSCI | CCNGG | 2 cut(s) | 105, 129 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BstV2I | GAAGAC | 1 cut(s) | 273 |
| BsuI | GTATCC | 1 cut(s) | 103 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtsCI | GGATG | 1 cut(s) | 210 |
| BtsIMutI | CAGTG | 1 cut(s) | 322 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviAII | CATG | 1 cut(s) | 136 |
| CviJI | RGCY | 5 cut(s) | 48, 95, 155, 161, 182 |
| CviKI_1 | RGCY | 5 cut(s) | 48, 95, 155, 161, 182 |
| CviQI | GTAC | 1 cut(s) | 247 |
| DdeI | CTNAG | 1 cut(s) | 184 |
| Eco31I | GGTCTC | 1 cut(s) | 292 |
| Eco32I | GATATC | 1 cut(s) | 56 |
| Eco57I | CTGAAG | 1 cut(s) | 227 |
| EcoRII | CCWGG | 2 cut(s) | 105, 129 |
| EcoRV | GATATC | 1 cut(s) | 56 |
| FaeI | CATG | 1 cut(s) | 139 |
| FaiI | YATR | 6 cut(s) | 137, 228, 230, 255, 257, 275 |
| FatI | CATG | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| FokI | GGATG | 1 cut(s) | 197 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| Hin1II | CATG | 1 cut(s) | 139 |
| HindIII | AAGCTT | 1 cut(s) | 159 |
| HinfI | GANTC | 3 cut(s) | 115, 122, 320 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 3 cut(s) | 51, 71, 119 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 188, 197 |
| HpyF3I | CTNAG | 1 cut(s) | 184 |
| Hsp92II | CATG | 1 cut(s) | 139 |
| LpnPI | CCDG | 9 cut(s) | 23, 30, 36, 92, 95, 116, 119, 143, 338 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeIII | GTNAC | 2 cut(s) | 5, 317 |
| MboII | GAAGA | 3 cut(s) | 275, 278, 308 |
| MlyI | GAGTC | 2 cut(s) | 131, 314 |
| MnlI | CCTC | 1 cut(s) | 181 |
| MslI | CAYNNNNRTG | 1 cut(s) | 231 |
| MspR9I | CCNGG | 2 cut(s) | 107, 131 |
| MvaI | CCWGG | 2 cut(s) | 107, 131 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 188, 197 |
| NlaIII | CATG | 1 cut(s) | 139 |
| NmuCI | GTSAC | 1 cut(s) | 317 |
| NspI | RCATGY | 1 cut(s) | 139 |
| PfeI | GAWTC | 1 cut(s) | 115 |
| PfoI | TCCNGGA | 1 cut(s) | 105 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PleI | GAGTC | 2 cut(s) | 130, 314 |
| PpsI | GAGTC | 2 cut(s) | 130, 314 |
| Psp6I | CCWGG | 2 cut(s) | 105, 129 |
| PspGI | CCWGG | 2 cut(s) | 105, 129 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| RseI | CAYNNNNRTG | 1 cut(s) | 231 |
| SatI | GCNGC | 1 cut(s) | 180 |
| SchI | GAGTC | 2 cut(s) | 131, 314 |
| ScrFI | CCNGG | 2 cut(s) | 107, 131 |
| SetI | ASST | 5 cut(s) | 12, 157, 163, 281, 339 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 231 |
| SmlI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| SmoI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| StyD4I | CCNGG | 2 cut(s) | 105, 129 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaqI | TCGA | 1 cut(s) | 294 |
| TfiI | GAWTC | 1 cut(s) | 115 |
| TscAI | CASTG | 1 cut(s) | 322 |
| TseFI | GTSAC | 1 cut(s) | 317 |
| TseI | GCWGC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 1 cut(s) | 317 |
| TspDTI | ATGAA | 2 cut(s) | 272, 276 |
| TspRI | CASTG | 1 cut(s) | 322 |
| XceI | RCATGY | 1 cut(s) | 139 |