Rmu_sc0007995.1_g000001

CBS domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007995.1
Physical Location & Seq
Forward (+)
1377 .. 3099
1723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007995.1_g000001.1.cds

Sequence Viewer

Length: 1506 bp
atgaccaccatcattactccacaacctcaccagctcctctcctctcctctcctctcctctgctccttttacatcgtcttcttcaacctttcctcctcacttcccattgtttccttccgtcttgcatggcagtgagcttcttgaggcacgaggtatccgacctctgtctagccaagccggctctgatactccacaacctcaccagctcctctcctctcctctcctctgctccttttacatcgtcttcttcaacctttcctcctcacttctccattgtttccttccgtcttgcatggcagtgagcttcttgaggcacgaggtatccgacctctgtctagccaagccggctctgaggtccctgtctgtctccgccaccgtcgccgatgccttagaggccctcaaaacctccgaagaaaacttcctcagcatttgggattgcaaccaccactccaaaaccctcgccggcgaacagtgccgctgcgtcgggaaggtctgcatggtcgatgtgatttgctacctttcccaagatgccaacctcgtgtctccctccgctgctctaaaggcacccgtctctgaaatcatgacagagactgcaggaaccgtgatgcacgtagagccttcttgcagcttactaaaagccattgatctaatgctccaaggaatccagaacctggtggtaccaatccaaaccaggcaaagcagcaactcaagaagaaagcaacacccaaaacccatcaacagcaccacaagcaccatccacaacggacaagagttctgctggctcacacaggaagacgtagtccggttcctcctcaactctattggggtgttctcaccccttcctgctctctcaatcgactcactcggcctcatcaacaccgctgacatcttggccatcaactaccactccccggctgactccgccgtccagctcataactcagtcgctgacacaacaaacctcagtggcggttgtggacattgatggtgtgttaatcggcgagatctcgccttttactctttccagctgtgacgagtcggtggctgcagccatcgccactctgtcatgcggagagctcatggcctacattgactgtggaggacctcctgagtacttgatcaagattgtgactgagagactcaaacagaggaagttacaaggagctttggagagttactcatcaagtacttcaagttccaattcaccaatgttttcttcttcttcttcttcatcatcagatgaggagtcctcagtatatccaggtagcaccagaatggtgaggtctgggaggttcagcaggtctaatagctactcagctaggatggtgaggagggctgaggctatagtgtgtcatcccaagagctcgttggtggctgtgatgattcaggcaattgctcacagagtgaactatgtttgggttattgaggatgattgcagccttgtggggattgtcactttttctgggatgttaaaggttttcagggagcatttggaaaccatgggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

501

Amino Acids

54.15

Weight (kDa)

5.92

Isoelectric Point (pI)

58.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 923
Acc36I ACCTGC 1 cut(s) 1287
Acc65I GGTACC 1 cut(s) 676
AccB1I GGYRCC 2 cut(s) 562, 676
AccB7I CCANNNNNTGG 1 cut(s) 670
AciI CCGC 7 cut(s) 369, 475, 549, 879, 921, 968, 1068
AcoI YGGCCR 1 cut(s) 891
AdeI CACNNNGTG 1 cut(s) 1402
AfaI GTAC 3 cut(s) 678, 1112, 1186
AfiI CCNNNNNNNGG 2 cut(s) 670, 910
AgsI TTSAA 3 cut(s) 84, 250, 1191
AjnI CCWGG 3 cut(s) 669, 689, 1258
AjuI GAANNNNNNNTTGG 2 cut(s) 1198, 1230
Alw21I GWGCWC 2 cut(s) 1077, 1364
Alw26I GTCTC 5 cut(s) 370, 546, 574, 581, 1129
AlwNI CAGNNNCTG 3 cut(s) 590, 670, 946
AoxI GGCC 4 cut(s) 393, 865, 891, 1080
ApeKI GCWGC 7 cut(s) 477, 551, 624, 699, 1043, 1046, 1434
Asp718I GGTACC 1 cut(s) 676
AspS9I GGNCC 3 cut(s) 354, 394, 1100
AsuC2I CCSGG 1 cut(s) 911
AsuHPI GGTGA 6 cut(s) 20, 191, 825, 1194, 1288, 1336
AvaII GGWCC 2 cut(s) 354, 1100
BalI TGGCCA 1 cut(s) 893
BanI GGYRCC 2 cut(s) 562, 676
BanII GRGCYC 2 cut(s) 1077, 1364
BauI CACGAG 3 cut(s) 147, 314, 536
BbsI GAAGAC 3 cut(s) 69, 235, 798
Bbv12I GWGCWC 2 cut(s) 1077, 1364
BbvCI CCTCAGC 2 cut(s) 422, 1335
BbvI GCAGC 7 cut(s) 464, 538, 636, 711, 1030, 1058, 1446
BccI CCATC 7 cut(s) 17, 740, 761, 902, 977, 1058, 1315
BceAI ACGGC 1 cut(s) 908
BciT130I CCWGG 3 cut(s) 671, 691, 1260
BciVI GTATCC 2 cut(s) 164, 331
BclI TGATCA 1 cut(s) 1116
BcnI CCSGG 1 cut(s) 911
BcoDI GTCTC 5 cut(s) 370, 546, 574, 581, 1129
BfaI CTAG 4 cut(s) 168, 335, 1317, 1504
BfmI CTRYAG 3 cut(s) 591, 1044, 1341
BfuAI ACCTGC 1 cut(s) 1287
BfuI GTATCC 2 cut(s) 164, 331
BglI GCCNNNNNGGC 3 cut(s) 177, 344, 392
BglII AGATCT 1 cut(s) 1002
BisI GCNGC 8 cut(s) 475, 478, 552, 625, 700, 1044, 1047, 1435
BlsI GCNGC 8 cut(s) 476, 479, 553, 626, 701, 1045, 1048, 1436
BmcAI AGTACT 2 cut(s) 1112, 1186
Bme1390I CCNGG 4 cut(s) 671, 691, 911, 1260
Bme18I GGWCC 2 cut(s) 354, 1100
BmgT120I GGNCC 3 cut(s) 354, 394, 1100
BmiI GGNNCC 5 cut(s) 356, 564, 598, 678, 806
BmrFI CCNGG 4 cut(s) 671, 691, 911, 1260
BmsI GCATC 3 cut(s) 373, 517, 594
BoxI GACNNNNGTC 2 cut(s) 163, 330
BpiI GAAGAC 3 cut(s) 69, 235, 798
BplI GAGNNNNNCTC 4 cut(s) 1160, 1192, 1232, 1264
Bpu10I CCTNAGC 2 cut(s) 422, 1335
BpuEI CTTGAG 3 cut(s) 161, 328, 691
BpuMI CCSGG 1 cut(s) 911
BsaAI YACGTR 1 cut(s) 610
BsaJI CCNNGG 3 cut(s) 655, 909, 1497
BsaWI WCCGGW 1 cut(s) 801
BsaXI ACNNNNNCTCC 8 cut(s) 76, 106, 242, 272, 431, 461, 890, 920
Bsc4I CCNNNNNNNGG 2 cut(s) 670, 910
Bse118I RCCGGY 3 cut(s) 176, 343, 461
BseBI CCWGG 3 cut(s) 671, 691, 1260
BseDI CCNNGG 3 cut(s) 655, 909, 1497
BseGI GGATG 5 cut(s) 753, 1326, 1351, 1432, 1470
BseLI CCNNNNNNNGG 2 cut(s) 670, 910
BseMII CTCAG 9 cut(s) 341, 436, 953, 975, 1098, 1122, 1263, 1326, 1326
BseXI GCAGC 7 cut(s) 464, 538, 636, 711, 1030, 1058, 1446
BshFI GGCC 4 cut(s) 395, 867, 893, 1082
BshNI GGYRCC 2 cut(s) 562, 676
BsiHKAI GWGCWC 2 cut(s) 1077, 1364
BsiSI CCGG 5 cut(s) 177, 344, 462, 802, 911
BslFI GGGAC 1 cut(s) 340
BslI CCNNNNNNNGG 2 cut(s) 670, 910
BsmAI GTCTC 5 cut(s) 370, 546, 574, 581, 1129
BsmBI CGTCTC 1 cut(s) 574
BsmFI GGGAC 1 cut(s) 340
BsnI GGCC 4 cut(s) 395, 867, 893, 1082
Bsp1286I GDGCHC 2 cut(s) 1077, 1364
Bsp143I GATC 3 cut(s) 643, 1002, 1116
Bsp19I CCATGG 1 cut(s) 1497
BspACI CCGC 7 cut(s) 369, 475, 549, 879, 921, 968, 1068
BspANI GGCC 4 cut(s) 395, 867, 893, 1082
BspCNI CTCAG 9 cut(s) 342, 435, 952, 974, 1099, 1123, 1262, 1325, 1327
BspHI TCATGA 1 cut(s) 579
BspLI GGNNCC 5 cut(s) 356, 564, 598, 678, 806
BspMAI CTGCAG 2 cut(s) 595, 1048
BspMI ACCTGC 1 cut(s) 1287
BspT107I GGYRCC 2 cut(s) 562, 676
BsrFI RCCGGY 3 cut(s) 176, 343, 461
BssAI RCCGGY 3 cut(s) 176, 343, 461
BssECI CCNNGG 3 cut(s) 655, 909, 1497
BssMI GATC 3 cut(s) 643, 1002, 1116
BssSI CACGAG 3 cut(s) 147, 314, 536
BssT1I CCWWGG 2 cut(s) 655, 1497
Bst2BI CACGAG 3 cut(s) 147, 314, 536
Bst2UI CCWGG 3 cut(s) 671, 691, 1260
Bst4CI ACNGT 4 cut(s) 376, 471, 601, 1094
BstBAI YACGTR 1 cut(s) 610
BstC8I GCNNGC 4 cut(s) 178, 345, 463, 779
BstDSI CCRYGG 1 cut(s) 1497
BstF5I GGATG 5 cut(s) 753, 1326, 1351, 1432, 1470
BstKTI GATC 3 cut(s) 646, 1005, 1119
BstMAI GTCTC 5 cut(s) 370, 546, 574, 581, 1129
BstMBI GATC 3 cut(s) 643, 1002, 1116
BstNI CCWGG 3 cut(s) 671, 691, 1260
BstPAI GACNNNNGTC 2 cut(s) 163, 330
BstSCI CCNGG 4 cut(s) 669, 689, 909, 1258
BstSFI CTRYAG 3 cut(s) 591, 1044, 1341
BstV1I GCAGC 7 cut(s) 464, 538, 636, 711, 1030, 1058, 1446
BstV2I GAAGAC 3 cut(s) 69, 235, 798
BstX2I RGATCY 1 cut(s) 1002
BstYI RGATCY 1 cut(s) 1002
BsuI GTATCC 2 cut(s) 164, 331
BsuRI GGCC 4 cut(s) 395, 867, 893, 1082
BtgI CCRYGG 1 cut(s) 1497
BtgZI GCGATG 1 cut(s) 1036
BtsCI GGATG 5 cut(s) 753, 1326, 1351, 1432, 1470
BtsI GCAGTG 2 cut(s) 136, 303
BtsIMutI CAGTG 4 cut(s) 136, 303, 476, 969
BveI ACCTGC 1 cut(s) 1287
Cac8I GCNNGC 4 cut(s) 178, 345, 463, 779
CaiI CAGNNNCTG 3 cut(s) 590, 670, 946
CciI TCATGA 1 cut(s) 579
Cfr10I RCCGGY 3 cut(s) 176, 343, 461
Cfr13I GGNCC 3 cut(s) 354, 394, 1100
CseI GACGC 1 cut(s) 469
CsiI ACCWGGT 1 cut(s) 669
Csp6I GTAC 3 cut(s) 677, 1111, 1185
CviAII CATG 7 cut(s) 125, 292, 496, 580, 1065, 1078, 1498
CviQI GTAC 3 cut(s) 677, 1111, 1185
DpnI GATC 3 cut(s) 645, 1004, 1118
DpnII GATC 3 cut(s) 643, 1002, 1116
DraIII CACNNNGTG 1 cut(s) 1402
DrdI GACNNNNNNGTC 1 cut(s) 923
DseDI GACNNNNNNGTC 1 cut(s) 923
EaeI YGGCCR 1 cut(s) 891
EciI GGCGGA 2 cut(s) 358, 910
Ecl136II GAGCTC 2 cut(s) 1075, 1362
Eco130I CCWWGG 2 cut(s) 655, 1497
Eco24I GRGCYC 2 cut(s) 1077, 1364
Eco47I GGWCC 2 cut(s) 354, 1100
Eco53kI GAGCTC 2 cut(s) 1075, 1362
EcoICRI GAGCTC 2 cut(s) 1075, 1362
EcoO109I RGGNCCY 3 cut(s) 354, 394, 1100
EcoRII CCWGG 3 cut(s) 669, 689, 1258
EcoT14I CCWWGG 2 cut(s) 655, 1497
EcoT38I GRGCYC 2 cut(s) 1077, 1364
ErhI CCWWGG 2 cut(s) 655, 1497
Esp3I CGTCTC 1 cut(s) 574
FaeI CATG 7 cut(s) 128, 295, 499, 583, 1068, 1081, 1501
FaqI GGGAC 1 cut(s) 340
FatI CATG 7 cut(s) 124, 291, 495, 579, 1064, 1077, 1497
FbaI TGATCA 1 cut(s) 1116
Fnu4HI GCNGC 8 cut(s) 475, 478, 552, 625, 700, 1044, 1047, 1435
FokI GGATG 5 cut(s) 740, 1333, 1338, 1439, 1477
FriOI GRGCYC 2 cut(s) 1077, 1364
Fsp4HI GCNGC 8 cut(s) 475, 478, 552, 625, 700, 1044, 1047, 1435
FspBI CTAG 4 cut(s) 168, 335, 1317, 1504
GluI GCNGC 8 cut(s) 475, 478, 552, 625, 700, 1044, 1047, 1435
HaeIII GGCC 4 cut(s) 395, 867, 893, 1082
HapII CCGG 5 cut(s) 177, 344, 462, 802, 911
HgaI GACGC 1 cut(s) 469
Hin1II CATG 7 cut(s) 128, 295, 499, 583, 1068, 1081, 1501
HinfI GANTC 7 cut(s) 660, 857, 917, 1034, 1137, 1244, 1381
HpaII CCGG 5 cut(s) 177, 344, 462, 802, 911
HphI GGTGA 6 cut(s) 20, 191, 825, 1194, 1288, 1336
Hpy166II GTNNAC 2 cut(s) 976, 1405
Hpy188I TCNGA 7 cut(s) 158, 184, 325, 351, 409, 574, 1237
Hpy188III TCNNGA 8 cut(s) 140, 307, 484, 580, 664, 708, 1106, 1120
Hpy8I GTNNAC 2 cut(s) 976, 1405
Hpy99I CGWCG 2 cut(s) 380, 485
HpyAV CCTTC 5 cut(s) 123, 290, 481, 627, 848
HpyCH4III ACNGT 4 cut(s) 376, 471, 601, 1094
HpyCH4IV ACGT 2 cut(s) 609, 795
HpyCH4V TGCA 9 cut(s) 124, 291, 438, 495, 593, 607, 624, 1046, 1434
HpySE526I ACGT 2 cut(s) 609, 795
Hsp92II CATG 7 cut(s) 128, 295, 499, 583, 1068, 1081, 1501
KpnI GGTACC 1 cut(s) 680
KroI GCCGGC 3 cut(s) 176, 343, 461
KroNI GCCGGC 3 cut(s) 178, 345, 463
Ksp22I TGATCA 1 cut(s) 1116
Kzo9I GATC 3 cut(s) 643, 1002, 1116
LmnI GCTCC 7 cut(s) 39, 67, 210, 233, 657, 1160, 1483
Lsp1109I GCAGC 7 cut(s) 464, 538, 636, 711, 1030, 1058, 1446
LweI GCATC 3 cut(s) 373, 517, 594
MabI ACCWGGT 1 cut(s) 669
MaeI CTAG 4 cut(s) 168, 335, 1317, 1504
MaeII ACGT 2 cut(s) 609, 795
MaeIII GTNAC 5 cut(s) 1028, 1126, 1152, 1172, 1450
MalI GATC 3 cut(s) 645, 1004, 1118
MboI GATC 3 cut(s) 643, 1002, 1116
MfeI CAATTG 1 cut(s) 1389
MflI RGATCY 1 cut(s) 1002
MhlI GDGCHC 2 cut(s) 1077, 1364
MlsI TGGCCA 1 cut(s) 893
MluCI AATT 2 cut(s) 1198, 1389
MluNI TGGCCA 1 cut(s) 893
MlyI GAGTC 5 cut(s) 851, 911, 1043, 1131, 1253
MmeI TCCRAC 2 cut(s) 181, 348
Mox20I TGGCCA 1 cut(s) 893
MreI CGCCGGCG 1 cut(s) 461
MroNI GCCGGC 3 cut(s) 176, 343, 461
MscI TGGCCA 1 cut(s) 893
MseI TTAA 2 cut(s) 992, 1469
MslI CAYNNNNRTG 3 cut(s) 129, 296, 1271
Msp20I TGGCCA 1 cut(s) 893
MspA1I CMGCKG 4 cut(s) 477, 551, 881, 1026
MspI CCGG 5 cut(s) 177, 344, 462, 802, 911
MspR9I CCNGG 4 cut(s) 671, 691, 911, 1260
MunI CAATTG 1 cut(s) 1389
MvaI CCWGG 3 cut(s) 671, 691, 1260
NaeI GCCGGC 3 cut(s) 178, 345, 463
NciI CCSGG 1 cut(s) 911
NcoI CCATGG 1 cut(s) 1497
NdeII GATC 3 cut(s) 643, 1002, 1116
NgoMIV GCCGGC 3 cut(s) 176, 343, 461
NlaIII CATG 7 cut(s) 128, 295, 499, 583, 1068, 1081, 1501
NlaIV GGNNCC 5 cut(s) 356, 564, 598, 678, 806
NmeAIII GCCGAG 1 cut(s) 843
NmuCI GTSAC 3 cut(s) 1028, 1126, 1450
PagI TCATGA 1 cut(s) 579
PcsI WCGNNNNNNNCGW 2 cut(s) 154, 321
PdiI GCCGGC 3 cut(s) 178, 345, 463
PfeI GAWTC 2 cut(s) 660, 1381
PflFI GACNNNGTC 1 cut(s) 797
PflMI CCANNNNNTGG 1 cut(s) 670
PkrI GCNGC 8 cut(s) 476, 479, 553, 626, 701, 1045, 1048, 1436
PleI GAGTC 5 cut(s) 851, 911, 1042, 1131, 1252
PpsI GAGTC 5 cut(s) 851, 911, 1042, 1131, 1252
Ppu21I YACGTR 1 cut(s) 610
PpuMI RGGWCCY 2 cut(s) 354, 1100
PshAI GACNNNNGTC 2 cut(s) 163, 330
Psp124BI GAGCTC 2 cut(s) 1077, 1364
Psp5II RGGWCCY 2 cut(s) 354, 1100
Psp6I CCWGG 3 cut(s) 669, 689, 1258
PspGI CCWGG 3 cut(s) 669, 689, 1258
PspN4I GGNNCC 5 cut(s) 356, 564, 598, 678, 806
PspPI GGNCC 3 cut(s) 354, 394, 1100
PspPPI RGGWCCY 2 cut(s) 354, 1100
PsrI GAACNNNNNNTAC 2 cut(s) 1177, 1209
PstI CTGCAG 2 cut(s) 595, 1048
PstNI CAGNNNCTG 3 cut(s) 590, 670, 946
PsuI RGATCY 1 cut(s) 1002
PsyI GACNNNGTC 1 cut(s) 797
PvuII CAGCTG 1 cut(s) 1026
RsaI GTAC 3 cut(s) 678, 1112, 1186
RsaNI GTAC 3 cut(s) 677, 1111, 1185
RseI CAYNNNNRTG 3 cut(s) 129, 296, 1271
SacI GAGCTC 2 cut(s) 1077, 1364
SaqAI TTAA 2 cut(s) 992, 1469
SatI GCNGC 8 cut(s) 475, 478, 552, 625, 700, 1044, 1047, 1435
Sau3AI GATC 3 cut(s) 643, 1002, 1116
Sau96I GGNCC 3 cut(s) 354, 394, 1100
ScaI AGTACT 2 cut(s) 1112, 1186
SchI GAGTC 5 cut(s) 851, 911, 1043, 1131, 1253
ScrFI CCNGG 4 cut(s) 671, 691, 911, 1260
SduI GDGCHC 2 cut(s) 1077, 1364
SexAI ACCWGGT 1 cut(s) 669
SfaNI GCATC 3 cut(s) 373, 517, 594
SfcI CTRYAG 3 cut(s) 591, 1044, 1341
SgrAI CRCCGGYG 1 cut(s) 461
SinI GGWCC 2 cut(s) 354, 1100
SmiMI CAYNNNNRTG 3 cut(s) 129, 296, 1271
SmlI CTYRAG 3 cut(s) 140, 307, 706
SmoI CTYRAG 3 cut(s) 140, 307, 706
Sse9I AATT 2 cut(s) 1198, 1389
SsiI CCGC 7 cut(s) 369, 475, 549, 879, 921, 968, 1068
SspMI CTAG 4 cut(s) 168, 335, 1317, 1504
SstI GAGCTC 2 cut(s) 1077, 1364
StyD4I CCNGG 4 cut(s) 669, 689, 909, 1258
StyI CCWWGG 2 cut(s) 655, 1497
TaaI ACNGT 4 cut(s) 376, 471, 601, 1094
TaiI ACGT 2 cut(s) 612, 798
TaqI TCGA 2 cut(s) 501, 855
TasI AATT 2 cut(s) 1198, 1389
TatI WGTACW 2 cut(s) 1110, 1184
TauI GCSGC 1 cut(s) 477
TfiI GAWTC 2 cut(s) 660, 1381
Tru1I TTAA 2 cut(s) 992, 1469
Tru9I TTAA 2 cut(s) 992, 1469
TscAI CASTG 4 cut(s) 136, 303, 476, 969
TseFI GTSAC 3 cut(s) 1028, 1126, 1450
TseI GCWGC 7 cut(s) 477, 551, 624, 699, 1043, 1046, 1434
Tsp45I GTSAC 3 cut(s) 1028, 1126, 1450
TspDTI ATGAA 1 cut(s) 1218
TspGWI ACGGA 3 cut(s) 106, 273, 777
TspRI CASTG 4 cut(s) 136, 303, 476, 969
Tth111I GACNNNGTC 1 cut(s) 797
Van91I CCANNNNNTGG 1 cut(s) 670
VpaK11BI GGWCC 2 cut(s) 354, 1100
XcmI CCANNNNNNNNNTGG 1 cut(s) 1363
XspI CTAG 4 cut(s) 168, 335, 1317, 1504
ZrmI AGTACT 2 cut(s) 1112, 1186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.