Rh5DG246500

CBS domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
28133515 .. 28135834
2320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG246500.1

Sequence Viewer

Length: 1335 bp
ATGACCACCATCATTACTCCACAACCTCACCAGCTCCTCTCCTCTCCTCTCCTCTGCTCCTTTTACATCGTCTTCTTCAACCTTTCCTCCTCACTTCTCCATTGTTTCCTTCCGTCTTGCATGGCAGTGAGCTTCTTGAGGCACGAGGTATCCGACCTCTGTCTAGCCAAGCCGGCTCTGAGGTCCCTGTCTGTCTCCGCCACCGTCGCCGATGCCTTAGAGGCCCTCAAAACCTCCGAAGAAAACTTCCTCAGCATTTGGGATTGCAACCACCACTCCAAAACCCTCGCCGGCGAACAGTGCCGCTGCGTCGGGAAGGTCTGCATGGTCGATGTGATTTGCTACCTTTCCCAAGATGCCAACCTCGTGTCTCCCTCCGCTGCTCTAAAGGCACCCGTCTCTGAAATCATGACAGAGACTGCAGGAACCGTGATGCACGTAGAGCCTTCTTGCAGCTTACTAAAAGCCATTGATCTAATGCTCCAAGGAATCCAGAACCTGGTGGTACCAATCCAAACCAGGCAAAGCAGCAACTCAAGAAGAAAGCAACACCCAAAACCCATCAACAGCACCACAAGCACCATCCACAACGGACAAGAGTTTTGCTGGCTCACACAGGAAGACGTAGTCCGGTTCCTCCTCAACTCTATTGGGGTGTTCTCACCCCTTCCTGCTCTCTCAATCGACTCACTCGGCCTCATCAACACCGCTGACATCTTGGCCATCAACTACCACTCCCCGGCTGACTCCGCCGTCCAGCTCATAACTCAGTCGCTGACACAACAAACCTCAGTGGCGGTTGTGGACATTGATGGTGTGTTAATCGGCGAGATCTCGCCTTTTACTCTTTCCAGCTGTGACGAGTCGGTGGCTGCAGCCATCGCCACTCTGTCATGCGGAGAGCTCATGGCCTACATTGACTGTGGAGGACCTCCTGAGTACTTGATCAAGATTGTGACTGAGAGACTCAAACAGAGGAAGTTACAAGGAGCTTTGGAGAGTTACTCATCAAGTACTTCAAGTTCCAATTCACCAATGTTTTCTTCTTCTTCTTCTTCATCATCAGATGAGGAGTCCTCAGTATATCCAGGTAGCACCAGAATGGTGAGGTCTGGGAGGTTCAGCAGGTCTAATAGCTACTCAGCTAGGATGGTGAGGAGGGCTGAGGCTATAGTGTGTCATCCCAAGAGCTCGTTGGTGGCTGTGATGATTCAGGCAATTGCTCACAGAGTGAACTATGTTTGGGTTATTGAGGATGATTGCAGCCTTGTGGGGATTGTCACTTTTTCTGGGATGTTAAAGGTTTTCAGGGAGCATTTGGAAACCATGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

444

Amino Acids

48.16

Weight (kDa)

5.84

Isoelectric Point (pI)

56.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 752
Acc36I ACCTGC 1 cut(s) 1116
Acc65I GGTACC 1 cut(s) 505
AccB1I GGYRCC 2 cut(s) 391, 505
AccB7I CCANNNNNTGG 1 cut(s) 499
AciI CCGC 7 cut(s) 198, 304, 378, 708, 750, 797, 897
AcoI YGGCCR 1 cut(s) 720
AdeI CACNNNGTG 1 cut(s) 1231
AfaI GTAC 3 cut(s) 507, 941, 1015
AfiI CCNNNNNNNGG 2 cut(s) 499, 739
AgsI TTSAA 2 cut(s) 79, 1020
AjnI CCWGG 3 cut(s) 498, 518, 1087
AjuI GAANNNNNNNTTGG 2 cut(s) 1027, 1059
Alw21I GWGCWC 2 cut(s) 906, 1193
Alw26I GTCTC 5 cut(s) 199, 375, 403, 410, 958
AlwNI CAGNNNCTG 3 cut(s) 419, 499, 775
AoxI GGCC 4 cut(s) 222, 694, 720, 909
ApeKI GCWGC 7 cut(s) 306, 380, 453, 528, 872, 875, 1263
ArsI GACNNNNNNTTYG 2 cut(s) 585, 617
Asp718I GGTACC 1 cut(s) 505
AspS9I GGNCC 3 cut(s) 183, 223, 929
AsuC2I CCSGG 1 cut(s) 740
AsuHPI GGTGA 5 cut(s) 20, 654, 1023, 1117, 1165
AvaII GGWCC 2 cut(s) 183, 929
BalI TGGCCA 1 cut(s) 722
BanI GGYRCC 2 cut(s) 391, 505
BanII GRGCYC 2 cut(s) 906, 1193
BauI CACGAG 2 cut(s) 143, 365
BbsI GAAGAC 2 cut(s) 64, 627
Bbv12I GWGCWC 2 cut(s) 906, 1193
BbvCI CCTCAGC 2 cut(s) 251, 1164
BbvI GCAGC 7 cut(s) 293, 367, 465, 540, 859, 887, 1275
BccI CCATC 7 cut(s) 17, 569, 590, 731, 806, 887, 1144
BceAI ACGGC 1 cut(s) 737
BciT130I CCWGG 3 cut(s) 500, 520, 1089
BciVI GTATCC 1 cut(s) 160
BclI TGATCA 1 cut(s) 945
BcnI CCSGG 1 cut(s) 740
BcoDI GTCTC 5 cut(s) 199, 375, 403, 410, 958
BfaI CTAG 3 cut(s) 164, 1146, 1333
BfmI CTRYAG 3 cut(s) 420, 873, 1170
BfuAI ACCTGC 1 cut(s) 1116
BfuI GTATCC 1 cut(s) 160
BglI GCCNNNNNGGC 2 cut(s) 173, 221
BglII AGATCT 1 cut(s) 831
BisI GCNGC 8 cut(s) 304, 307, 381, 454, 529, 873, 876, 1264
BlsI GCNGC 8 cut(s) 305, 308, 382, 455, 530, 874, 877, 1265
BmcAI AGTACT 2 cut(s) 941, 1015
Bme1390I CCNGG 4 cut(s) 500, 520, 740, 1089
Bme18I GGWCC 2 cut(s) 183, 929
BmgT120I GGNCC 3 cut(s) 183, 223, 929
BmiI GGNNCC 5 cut(s) 185, 393, 427, 507, 635
BmrFI CCNGG 4 cut(s) 500, 520, 740, 1089
BmsI GCATC 3 cut(s) 202, 346, 423
BoxI GACNNNNGTC 1 cut(s) 159
BpiI GAAGAC 2 cut(s) 64, 627
BplI GAGNNNNNCTC 4 cut(s) 989, 1021, 1061, 1093
Bpu10I CCTNAGC 2 cut(s) 251, 1164
BpuEI CTTGAG 2 cut(s) 157, 520
BpuMI CCSGG 1 cut(s) 740
BsaAI YACGTR 1 cut(s) 439
BsaJI CCNNGG 3 cut(s) 484, 738, 1326
BsaWI WCCGGW 1 cut(s) 630
BsaXI ACNNNNNCTCC 6 cut(s) 71, 101, 260, 290, 719, 749
Bsc4I CCNNNNNNNGG 2 cut(s) 499, 739
Bse118I RCCGGY 2 cut(s) 172, 290
BseBI CCWGG 3 cut(s) 500, 520, 1089
BseDI CCNNGG 3 cut(s) 484, 738, 1326
BseGI GGATG 5 cut(s) 582, 1155, 1180, 1261, 1299
BseLI CCNNNNNNNGG 2 cut(s) 499, 739
BseMII CTCAG 9 cut(s) 170, 265, 782, 804, 927, 951, 1092, 1155, 1155
BseRI GAGGAG 8 cut(s) 26, 31, 36, 41, 79, 629, 1085, 1171
BseXI GCAGC 7 cut(s) 293, 367, 465, 540, 859, 887, 1275
BshFI GGCC 4 cut(s) 224, 696, 722, 911
BshNI GGYRCC 2 cut(s) 391, 505
BsiHKAI GWGCWC 2 cut(s) 906, 1193
BsiSI CCGG 4 cut(s) 173, 291, 631, 740
BslFI GGGAC 1 cut(s) 169
BslI CCNNNNNNNGG 2 cut(s) 499, 739
BsmAI GTCTC 5 cut(s) 199, 375, 403, 410, 958
BsmBI CGTCTC 1 cut(s) 403
BsmFI GGGAC 1 cut(s) 169
BsnI GGCC 4 cut(s) 224, 696, 722, 911
Bsp1286I GDGCHC 2 cut(s) 906, 1193
Bsp143I GATC 3 cut(s) 472, 831, 945
Bsp19I CCATGG 1 cut(s) 1326
BspACI CCGC 7 cut(s) 198, 304, 378, 708, 750, 797, 897
BspANI GGCC 4 cut(s) 224, 696, 722, 911
BspCNI CTCAG 9 cut(s) 171, 264, 781, 803, 928, 952, 1091, 1154, 1156
BspHI TCATGA 1 cut(s) 408
BspLI GGNNCC 5 cut(s) 185, 393, 427, 507, 635
BspMAI CTGCAG 2 cut(s) 424, 877
BspMI ACCTGC 1 cut(s) 1116
BspT107I GGYRCC 2 cut(s) 391, 505
BsrFI RCCGGY 2 cut(s) 172, 290
BssAI RCCGGY 2 cut(s) 172, 290
BssECI CCNNGG 3 cut(s) 484, 738, 1326
BssMI GATC 3 cut(s) 472, 831, 945
BssSI CACGAG 2 cut(s) 143, 365
BssT1I CCWWGG 2 cut(s) 484, 1326
Bst2BI CACGAG 2 cut(s) 143, 365
Bst2UI CCWGG 3 cut(s) 500, 520, 1089
Bst4CI ACNGT 4 cut(s) 205, 300, 430, 923
BstBAI YACGTR 1 cut(s) 439
BstC8I GCNNGC 3 cut(s) 174, 292, 608
BstDSI CCRYGG 1 cut(s) 1326
BstF5I GGATG 5 cut(s) 582, 1155, 1180, 1261, 1299
BstKTI GATC 3 cut(s) 475, 834, 948
BstMAI GTCTC 5 cut(s) 199, 375, 403, 410, 958
BstMBI GATC 3 cut(s) 472, 831, 945
BstMWI GCNNNNNNNGC 9 cut(s) 173, 206, 221, 300, 389, 442, 576, 749, 881
BstNI CCWGG 3 cut(s) 500, 520, 1089
BstPAI GACNNNNGTC 1 cut(s) 159
BstSCI CCNGG 4 cut(s) 498, 518, 738, 1087
BstSFI CTRYAG 3 cut(s) 420, 873, 1170
BstV1I GCAGC 7 cut(s) 293, 367, 465, 540, 859, 887, 1275
BstV2I GAAGAC 2 cut(s) 64, 627
BstX2I RGATCY 1 cut(s) 831
BstYI RGATCY 1 cut(s) 831
BsuI GTATCC 1 cut(s) 160
BsuRI GGCC 4 cut(s) 224, 696, 722, 911
BtgI CCRYGG 1 cut(s) 1326
BtgZI GCGATG 1 cut(s) 865
BtsCI GGATG 5 cut(s) 582, 1155, 1180, 1261, 1299
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 3 cut(s) 132, 305, 798
BveI ACCTGC 1 cut(s) 1116
Cac8I GCNNGC 3 cut(s) 174, 292, 608
CaiI CAGNNNCTG 3 cut(s) 419, 499, 775
CciI TCATGA 1 cut(s) 408
Cfr10I RCCGGY 2 cut(s) 172, 290
Cfr13I GGNCC 3 cut(s) 183, 223, 929
CseI GACGC 1 cut(s) 298
CsiI ACCWGGT 1 cut(s) 498
Csp6I GTAC 3 cut(s) 506, 940, 1014
CviAII CATG 6 cut(s) 121, 325, 409, 894, 907, 1327
CviQI GTAC 3 cut(s) 506, 940, 1014
DpnI GATC 3 cut(s) 474, 833, 947
DpnII GATC 3 cut(s) 472, 831, 945
DraIII CACNNNGTG 1 cut(s) 1231
DrdI GACNNNNNNGTC 1 cut(s) 752
DseDI GACNNNNNNGTC 1 cut(s) 752
EaeI YGGCCR 1 cut(s) 720
EciI GGCGGA 2 cut(s) 187, 739
Ecl136II GAGCTC 2 cut(s) 904, 1191
Eco130I CCWWGG 2 cut(s) 484, 1326
Eco24I GRGCYC 2 cut(s) 906, 1193
Eco47I GGWCC 2 cut(s) 183, 929
Eco53kI GAGCTC 2 cut(s) 904, 1191
EcoICRI GAGCTC 2 cut(s) 904, 1191
EcoO109I RGGNCCY 3 cut(s) 183, 223, 929
EcoRII CCWGG 3 cut(s) 498, 518, 1087
EcoT14I CCWWGG 2 cut(s) 484, 1326
EcoT38I GRGCYC 2 cut(s) 906, 1193
ErhI CCWWGG 2 cut(s) 484, 1326
Esp3I CGTCTC 1 cut(s) 403
FaeI CATG 6 cut(s) 124, 328, 412, 897, 910, 1330
FaqI GGGAC 1 cut(s) 169
FatI CATG 6 cut(s) 120, 324, 408, 893, 906, 1326
FbaI TGATCA 1 cut(s) 945
Fnu4HI GCNGC 8 cut(s) 304, 307, 381, 454, 529, 873, 876, 1264
FokI GGATG 5 cut(s) 569, 1162, 1167, 1268, 1306
FriOI GRGCYC 2 cut(s) 906, 1193
Fsp4HI GCNGC 8 cut(s) 304, 307, 381, 454, 529, 873, 876, 1264
FspBI CTAG 3 cut(s) 164, 1146, 1333
GluI GCNGC 8 cut(s) 304, 307, 381, 454, 529, 873, 876, 1264
HaeIII GGCC 4 cut(s) 224, 696, 722, 911
HapII CCGG 4 cut(s) 173, 291, 631, 740
HgaI GACGC 1 cut(s) 298
Hin1II CATG 6 cut(s) 124, 328, 412, 897, 910, 1330
HinfI GANTC 7 cut(s) 489, 686, 746, 863, 966, 1073, 1210
HpaII CCGG 4 cut(s) 173, 291, 631, 740
HphI GGTGA 5 cut(s) 20, 654, 1023, 1117, 1165
Hpy166II GTNNAC 2 cut(s) 805, 1234
Hpy188I TCNGA 5 cut(s) 154, 180, 238, 403, 1066
Hpy188III TCNNGA 7 cut(s) 136, 313, 409, 493, 537, 935, 949
Hpy8I GTNNAC 2 cut(s) 805, 1234
Hpy99I CGWCG 2 cut(s) 209, 314
HpyAV CCTTC 4 cut(s) 119, 310, 456, 677
HpyCH4III ACNGT 4 cut(s) 205, 300, 430, 923
HpyCH4IV ACGT 2 cut(s) 438, 624
HpyCH4V TGCA 8 cut(s) 120, 267, 324, 422, 436, 453, 875, 1263
HpyF10VI GCNNNNNNNGC 9 cut(s) 173, 206, 221, 300, 389, 442, 576, 749, 881
HpySE526I ACGT 2 cut(s) 438, 624
Hsp92II CATG 6 cut(s) 124, 328, 412, 897, 910, 1330
KpnI GGTACC 1 cut(s) 509
KroI GCCGGC 2 cut(s) 172, 290
KroNI GCCGGC 2 cut(s) 174, 292
Ksp22I TGATCA 1 cut(s) 945
Kzo9I GATC 3 cut(s) 472, 831, 945
LmnI GCTCC 5 cut(s) 39, 62, 486, 989, 1312
Lsp1109I GCAGC 7 cut(s) 293, 367, 465, 540, 859, 887, 1275
LweI GCATC 3 cut(s) 202, 346, 423
MabI ACCWGGT 1 cut(s) 498
MaeI CTAG 3 cut(s) 164, 1146, 1333
MaeII ACGT 2 cut(s) 438, 624
MaeIII GTNAC 5 cut(s) 857, 955, 981, 1001, 1279
MalI GATC 3 cut(s) 474, 833, 947
MboI GATC 3 cut(s) 472, 831, 945
MfeI CAATTG 1 cut(s) 1218
MflI RGATCY 1 cut(s) 831
MhlI GDGCHC 2 cut(s) 906, 1193
MlsI TGGCCA 1 cut(s) 722
MluCI AATT 2 cut(s) 1027, 1218
MluNI TGGCCA 1 cut(s) 722
MlyI GAGTC 5 cut(s) 680, 740, 872, 960, 1082
MmeI TCCRAC 1 cut(s) 177
Mox20I TGGCCA 1 cut(s) 722
MreI CGCCGGCG 1 cut(s) 290
MroNI GCCGGC 2 cut(s) 172, 290
MscI TGGCCA 1 cut(s) 722
MseI TTAA 2 cut(s) 821, 1298
MslI CAYNNNNRTG 2 cut(s) 125, 1100
Msp20I TGGCCA 1 cut(s) 722
MspA1I CMGCKG 4 cut(s) 306, 380, 710, 855
MspI CCGG 4 cut(s) 173, 291, 631, 740
MspR9I CCNGG 4 cut(s) 500, 520, 740, 1089
MunI CAATTG 1 cut(s) 1218
MvaI CCWGG 3 cut(s) 500, 520, 1089
MwoI GCNNNNNNNGC 9 cut(s) 173, 206, 221, 300, 389, 442, 576, 749, 881
NaeI GCCGGC 2 cut(s) 174, 292
NciI CCSGG 1 cut(s) 740
NcoI CCATGG 1 cut(s) 1326
NdeII GATC 3 cut(s) 472, 831, 945
NgoMIV GCCGGC 2 cut(s) 172, 290
NlaIII CATG 6 cut(s) 124, 328, 412, 897, 910, 1330
NlaIV GGNNCC 5 cut(s) 185, 393, 427, 507, 635
NmeAIII GCCGAG 1 cut(s) 672
NmuCI GTSAC 3 cut(s) 857, 955, 1279
PagI TCATGA 1 cut(s) 408
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PdiI GCCGGC 2 cut(s) 174, 292
PfeI GAWTC 2 cut(s) 489, 1210
PflFI GACNNNGTC 1 cut(s) 626
PflMI CCANNNNNTGG 1 cut(s) 499
PkrI GCNGC 8 cut(s) 305, 308, 382, 455, 530, 874, 877, 1265
PleI GAGTC 5 cut(s) 680, 740, 871, 960, 1081
PpsI GAGTC 5 cut(s) 680, 740, 871, 960, 1081
Ppu21I YACGTR 1 cut(s) 439
PpuMI RGGWCCY 2 cut(s) 183, 929
PshAI GACNNNNGTC 1 cut(s) 159
Psp124BI GAGCTC 2 cut(s) 906, 1193
Psp5II RGGWCCY 2 cut(s) 183, 929
Psp6I CCWGG 3 cut(s) 498, 518, 1087
PspGI CCWGG 3 cut(s) 498, 518, 1087
PspN4I GGNNCC 5 cut(s) 185, 393, 427, 507, 635
PspPI GGNCC 3 cut(s) 183, 223, 929
PspPPI RGGWCCY 2 cut(s) 183, 929
PsrI GAACNNNNNNTAC 2 cut(s) 1006, 1038
PstI CTGCAG 2 cut(s) 424, 877
PstNI CAGNNNCTG 3 cut(s) 419, 499, 775
PsuI RGATCY 1 cut(s) 831
PsyI GACNNNGTC 1 cut(s) 626
PvuII CAGCTG 1 cut(s) 855
RsaI GTAC 3 cut(s) 507, 941, 1015
RsaNI GTAC 3 cut(s) 506, 940, 1014
RseI CAYNNNNRTG 2 cut(s) 125, 1100
SacI GAGCTC 2 cut(s) 906, 1193
SaqAI TTAA 2 cut(s) 821, 1298
SatI GCNGC 8 cut(s) 304, 307, 381, 454, 529, 873, 876, 1264
Sau3AI GATC 3 cut(s) 472, 831, 945
Sau96I GGNCC 3 cut(s) 183, 223, 929
ScaI AGTACT 2 cut(s) 941, 1015
SchI GAGTC 5 cut(s) 680, 740, 872, 960, 1082
ScrFI CCNGG 4 cut(s) 500, 520, 740, 1089
SduI GDGCHC 2 cut(s) 906, 1193
SexAI ACCWGGT 1 cut(s) 498
SfaNI GCATC 3 cut(s) 202, 346, 423
SfcI CTRYAG 3 cut(s) 420, 873, 1170
SgrAI CRCCGGYG 1 cut(s) 290
SinI GGWCC 2 cut(s) 183, 929
SmiMI CAYNNNNRTG 2 cut(s) 125, 1100
SmlI CTYRAG 2 cut(s) 136, 535
SmoI CTYRAG 2 cut(s) 136, 535
Sse9I AATT 2 cut(s) 1027, 1218
SsiI CCGC 7 cut(s) 198, 304, 378, 708, 750, 797, 897
SspMI CTAG 3 cut(s) 164, 1146, 1333
SstI GAGCTC 2 cut(s) 906, 1193
StyD4I CCNGG 4 cut(s) 498, 518, 738, 1087
StyI CCWWGG 2 cut(s) 484, 1326
TaaI ACNGT 4 cut(s) 205, 300, 430, 923
TaiI ACGT 2 cut(s) 441, 627
TaqI TCGA 2 cut(s) 330, 684
TasI AATT 2 cut(s) 1027, 1218
TatI WGTACW 2 cut(s) 939, 1013
TauI GCSGC 1 cut(s) 306
TfiI GAWTC 2 cut(s) 489, 1210
Tru1I TTAA 2 cut(s) 821, 1298
Tru9I TTAA 2 cut(s) 821, 1298
TscAI CASTG 3 cut(s) 132, 305, 798
TseFI GTSAC 3 cut(s) 857, 955, 1279
TseI GCWGC 7 cut(s) 306, 380, 453, 528, 872, 875, 1263
Tsp45I GTSAC 3 cut(s) 857, 955, 1279
TspDTI ATGAA 1 cut(s) 1047
TspGWI ACGGA 2 cut(s) 102, 606
TspRI CASTG 3 cut(s) 132, 305, 798
Tth111I GACNNNGTC 1 cut(s) 626
Van91I CCANNNNNTGG 1 cut(s) 499
VpaK11BI GGWCC 2 cut(s) 183, 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 1192
XspI CTAG 3 cut(s) 164, 1146, 1333
ZrmI AGTACT 2 cut(s) 941, 1015
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.